To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SPINK2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
102 supporting clones for gene SPINK2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI561149 testis .a 1 to 764 1 to 769 S20N tiling clone, AAA   769/769
(100 %)
9 diff
(98.9 %id)
TI_44348827   .a 3 to 764 85 to 851 S20N AAA   767/851
(90 %)
11 diff
(98.8 %id)
AL036041 brain .a 26 to 274 1 to 249       249/249
(100 %)
3 diff
(98.8 %id)
TI_44349871   .a 47 to 765 117 to 836 exact     720/986
(73 %)
14 diff
(98.6 %id)
BI562269 testis .a 49 to 765 1 to 718 exact tiling clone,   718/748
(95 %)
10 diff
(98.7 %id)
AJ713665 bone marrow .a 58 to 484 1 to 427       427/427
(100 %)
2 diff
(99.6 %id)
AA779272 liver and spleen .a 244 to 730 487 to 1       487/487
(100 %)
0 diff
(100 %id)
AI813832 normal prostate, Prostate .a 279 to 765 493 to 7       487/494
(98 %)
0 diff
(100 %id)
BG214688   .a 332 to 1122 1 to 787   tiling clone,   787/788
(99 %)
18 diff
(97.8 %id)
TI_43963403   .b 1 to 655 31 to 689 A2M P74N N75A C76K S77L ... tiling clone, fully sequenced,   659/689
(95 %)
7 diff
(99.0 %id)
BI520020 brain, medulla .b 8 to 655 1 to 652   tiling clone, fully sequenced,   652/652
(100 %)
4 diff
(99.4 %id)
BI520929 brain, medulla .b 191 to 576 392 to 5   tiling clone, fully sequenced,   388/392
(98 %)
3 diff
(99.3 %id)
TI_43963404   .b 260 to 576 319 to 5   fully sequenced,   315/319
(98 %)
0 diff
(100 %id)
TI_57170365   .c 1 to 662 56 to 717       662/717
(92 %)
6 diff
(99.2 %id)
BI825475 brain, medulla .c 4 to 662 1 to 659   tiling clone,   659/659
(100 %)
3 diff
(99.6 %id)
BI827169 brain, medulla .c 9 to 672 1 to 666 S34I AAA   666/666
(100 %)
6 diff
(99.1 %id)
BI826716 brain, medulla .c 9 to 673 1 to 673 S20M A21R R22S S23E G24R ... tiling clone,   671/704
(95 %)
11 diff
(98.5 %id)
TI_57174483   .c 9 to 672 43 to 708 S34I AAA   666/708
(94 %)
9 diff
(98.8 %id)
TI_57174578   .c 9 to 673 71 to 743 S20M A21R R22S S23E G24R ...     671/918
(73 %)
12 diff
(98.7 %id)
AA336010 epididymis .c 25 to 418 1 to 398 L10C L11C L12S L13W A14Q ...     398/398
(100 %)
7 diff
(98.3 %id)
BF589674 Prostate .d 1 to 433 436 to 4 T66L G67A tiling clone,   433/436
(99 %)
0 diff
(100 %id)
BG700147 brain, hippocampus .e -9 to 596 1 to 606 exact tiling clone, AAA   606/606
(100 %)
5 diff
(99.2 %id)
BC022514 Brain, hippocampus .e 1 to 596 6 to 601 exact available from MGC, AAA   601/601
(100 %)
0 diff
(100 %id)
BP370862 testis .e 1 to 545 6 to 550 exact     550/550
(100 %)
6 diff
(99.0 %id)
X57655   .e 1 to 590 5 to 594 exact     594/594
(100 %)
4 diff
(99.4 %id)
AK312222 testis .e 1 to 319 2 to 320 exact     320/320
(100 %)
0 diff
(100 %id)
NM_021114.2   .e 1 to 590 2 to 591 exact RefSeq,   591/591
(100 %)
1 diff
(99.9 %id)
DB092071 testis .e 1 to 545 2 to 546 exact capped   545/545
(100 %)
0 diff
(100 %id)
BU853655 testis .e 2 to 600 1 to 598 exact     598/603
(99 %)
2 diff
(99.7 %id)
BU570179 testis .e 5 to 584 1 to 580 exact     580/844
(68 %)
4 diff
(99.6 %id)
BI544313 brain, hippocampus .e 6 to 596 1 to 591 exact AAA   591/591
(100 %)
5 diff
(99.2 %id)
DB448322 testis .e 10 to 427 1 to 415 L12V C84W     415/415
(100 %)
6 diff
(98.6 %id)
DB461446 testis .e 10 to 493 1 to 481 G43C C44P P45R R46H H47F ...     481/481
(100 %)
4 diff
(99.2 %id)
TI_44000349   .e 11 to 596 92 to 677 exact AAA   586/677
(86 %)
7 diff
(99.0 %id)
DB471482 hippocampus .e 13 to 515 1 to 503 exact     503/504
(99 %)
1 diff
(99.9 %id)
AI126426   .e 17 to 493 477 to 1 exact     477/481
(99 %)
4 diff
(99.2 %id)
BM563686 brain, medulla .e 19 to 596 13 to 589 exact     577/1199
(48 %)
7 diff
(99.5 %id)
DB446484 testis .e 22 to 470 1 to 448 L12V     448/448
(100 %)
3 diff
(99.4 %id)
DB451710 testis .e 22 to 513 1 to 490 exact     490/490
(100 %)
1 diff
(99.8 %id)
FE192594   .e 36 to 446 118 to 528 M67W R70X R80Q C84R     411/528
(77 %)
10 diff
(98.2 %id)
FE192658   .e 36 to 457 118 to 539 exact     422/539
(78 %)
10 diff
(98.2 %id)
FE192689   .e 36 to 510 119 to 593 exact     475/593
(80 %)
7 diff
(98.9 %id)
BM314125 insulinoma, Pancreas .e 52 to 491 7 to 446 exact     440/446
(98 %)
0 diff
(100 %id)
CK905202 insulinoma, Pancreas .e 52 to 578 7 to 533 exact     527/533
(98 %)
0 diff
(100 %id)
BU567677 testis .e 58 to 589 1 to 534 exact     534/565
(94 %)
4 diff
(99.3 %id)
CR542135   .e 65 to 316 1 to 252       252/252
(100 %)
0 diff
(100 %id)
CV024094 mixed .e 65 to 212 1 to 148       148/148
(100 %)
8 diff
(94.6 %id)
AW274239 pooled .e 102 to 505 409 to 6       404/409
(98 %)
0 diff
(100 %id)
AI138846   .e 118 to 596 489 to 12   AAA   478/478
(100 %)
4 diff
(99.2 %id)
AA548428 normal prostate, Prostate .e 120 to 591 471 to 1       476/476
(100 %)
1 diff
(99.8 %id)
AA872176 pooled germ cell tumors .e 123 to 596 472 to 1       472/472
(100 %)
4 diff
(99.2 %id)
BI829061 brain, medulla .e 126 to 586 1 to 461       461/816
(56 %)
7 diff
(99.2 %id)
TI_57175792   .e 126 to 586 35 to 495       461/850
(54 %)
13 diff
(98.5 %id)
AA625888   .e 130 to 486 372 to 16   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 357/357
(100 %)
0 diff
(100 %id)
AW103837 pooled .e 131 to 597 471 to 4       468/475
(98 %)
4 diff
(99.2 %id)
AA973772 pooled germ cell tumors .e 140 to 598 481 to 23   AAA   459/459
(100 %)
0 diff
(100 %id)
BU561027 testis .e 142 to 599 1 to 457       457/466
(98 %)
3 diff
(99.4 %id)
AW072431 pooled .e 145 to 597 456 to 4       453/456
(99 %)
0 diff
(100 %id)
AW082715 pooled .e 149 to 597 452 to 4       449/452
(99 %)
0 diff
(100 %id)
DB517198 testis .e 150 to 596 1 to 445     Submitted on the opposite strand 445/445
(100 %)
1 diff
(99.8 %id)
BG217891   .e 158 to 598 1 to 440   AAA   438/440
(99 %)
7 diff
(98.5 %id)
BG210584   .e 160 to 598 1 to 439   AAA   439/439
(100 %)
5 diff
(98.9 %id)
BG197442   .e 161 to 596 1 to 437   AAA   437/437
(100 %)
7 diff
(98.4 %id)
BG193436   .e 162 to 596 1 to 435   AAA   435/435
(100 %)
3 diff
(99.4 %id)
BG193437   .e 162 to 597 1 to 437       437/440
(99 %)
10 diff
(97.8 %id)
BG193958   .e 162 to 596 1 to 436   AAA   436/436
(100 %)
3 diff
(99.4 %id)
AW468814 pooled .e 163 to 596 444 to 11   AAA   434/443
(97 %)
0 diff
(100 %id)
BG216867   .e 164 to 556 398 to 4     Submitted on the opposite strand 395/398
(99 %)
4 diff
(99.0 %id)
AI350434 pooled germ cell tumors .e 164 to 596 433 to 1       433/468
(92 %)
8 diff
(98.3 %id)
DB526855 testis .e 165 to 591 1 to 424   AAA Submitted on the opposite strand 424/424
(100 %)
19 diff
(95.6 %id)
AV740384 cord Blood .e 167 to 596 60 to 474   AAA   413/474
(87 %)
15 diff
(96.9 %id)
DB513428 testis .e 167 to 596 1 to 430     Submitted on the opposite strand 430/430
(100 %)
9 diff
(98.0 %id)
BG208908   .e 169 to 598 9 to 438   AAA   430/438
(98 %)
8 diff
(98.2 %id)
BG188741   .e 170 to 595 1 to 426       426/461
(92 %)
9 diff
(98.1 %id)
BG197976   .e 170 to 598 11 to 439   AAA   429/439
(97 %)
8 diff
(98.2 %id)
AA335937 epididymis .e 177 to 550 1 to 374       374/374
(100 %)
5 diff
(98.7 %id)
BM422945 testis .e 180 to 596 475 to 59   AAA Submitted on the opposite strand 417/449
(92 %)
4 diff
(99.2 %id)
BX280528 brain, hippocampus .e 193 to 596 446 to 43   AAA Submitted on the opposite strand 404/404
(100 %)
0 diff
(100 %id)
AA570635 normal prostate, Prostate .e 196 to 588 394 to 1       394/394
(100 %)
1 diff
(99.8 %id)
AA917512 pooled .e 197 to 596 401 to 1       401/406
(98 %)
17 diff
(95.9 %id)
AW950529   .e 204 to 595 1 to 392       392/521
(75 %)
2 diff
(99.7 %id)
AW950531   .e 204 to 596 1 to 393   AAA   393/393
(100 %)
0 diff
(100 %id)
AW950533   .e 204 to 585 1 to 382       382/382
(100 %)
8 diff
(98.0 %id)
AA416720 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 206 to 590 1 to 384   fully sequenced,   384/384
(100 %)
43 diff
(88.9 %id)
BQ429696 testis .e 207 to 596 1 to 392       392/787
(49 %)
7 diff
(99.2 %id)
AA335752 epididymis .e 209 to 334 1 to 126       126/126
(100 %)
0 diff
(100 %id)
AV743393 cord Blood .e 209 to 595 19 to 397   AAA   379/397
(95 %)
12 diff
(97.0 %id)
T28379 colon, epididymis .e 209 to 591 1 to 387       387/389
(99 %)
14 diff
(96.5 %id)
DB540211 hippocampus .e 221 to 594 1 to 374     Submitted on the opposite strand 374/376
(99 %)
3 diff
(99.3 %id)
DB511685 testis .e 235 to 594 1 to 363     Submitted on the opposite strand 365/365
(100 %)
19 diff
(94.8 %id)
BM313844 insulinoma, Pancreas .e 239 to 587 349 to 1       349/349
(100 %)
0 diff
(100 %id)
AA416641 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 243 to 593 352 to 2   fully sequenced,   351/352
(99 %)
0 diff
(100 %id)
BM422425 testis .e 254 to 596 372 to 30   AAA Submitted on the opposite strand 343/343
(100 %)
2 diff
(99.5 %id)
BM422396 testis .e 271 to 596 355 to 30   AAA Submitted on the opposite strand 326/341
(95 %)
2 diff
(99.5 %id)
AA782969   .e 274 to 593 325 to 6       320/325
(98 %)
0 diff
(100 %id)
BG206296   .e 279 to 598 1 to 318   AAA   318/318
(100 %)
6 diff
(98.2 %id)
AA905437 pooled .e 349 to 597 252 to 4       249/252
(98 %)
0 diff
(100 %id)
AI669675 Prostate .e 374 to 595 229 to 8       222/229
(96 %)
0 diff
(100 %id)
GD148575   .e 465 to 596 1 to 132   AAA   132/132
(100 %)
2 diff
(98.5 %id)
AV743457 cord Blood .f 1 to 416 58 to 459 exact tiling clone,   402/461
(87 %)
20 diff
(95.7 %id)
AA758996   .g 1 to 378 381 to 6   tiling clone,   376/381
(98 %)
2 diff
(99.5 %id)
AW182819 pooled .g 65 to 581 536 to 20 exact tiling clone, AAA   517/517
(100 %)
0 diff
(100 %id)
AW183944 pooled .h 1 to 282 285 to 4 exact tiling clone,   282/285
(98 %)
0 diff
(100 %id)
AA776754   Gene SPINK2, variant not shown         This clone was ignored    
AW592089 pooled Gene SPINK2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC