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Gene SPIBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
107 supporting clones for gene SPIB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM152265 leukopheresis .a 1 to 491 6 to 496       496/496
(100 %)
3 diff
(99.4 %id)
AK225720 thymus .a 1 to 1466 5 to 1471 K30R A104P S253G AAA   1471/1471
(100 %)
6 diff
(99.6 %id)
NM_003121.3   .a 1 to 1466 5 to 1471 exact RefSeq, AAA   1471/1471
(100 %)
2 diff
(99.9 %id)
BP368482 thymus .a 1 to 576 5 to 580       580/580
(100 %)
3 diff
(99.5 %id)
AK225225 colon .a 1 to 3524 3 to 3528 A104P tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 3528/3528
(100 %)
9 diff
(99.8 %id)
AU098646   .a 1 to 298 3 to 300       300/300
(100 %)
4 diff
(98.7 %id)
DA819024   .a 1 to 554 4 to 557   capped   556/556
(100 %)
4 diff
(99.3 %id)
AW503820 lymph .a 1 to 415 2 to 416       416/416
(100 %)
7 diff
(98.4 %id)
BP324469 Pancreas .a 1 to 480 2 to 481       481/586
(82 %)
25 diff
(95.8 %id)
DA948461 Spleen .a 1 to 536 3 to 541   capped   540/540
(100 %)
7 diff
(98.8 %id)
DA954078 Spleen .a 1 to 573 3 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA958449 Spleen .a 1 to 554 3 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA813912   .a 1 to 565 2 to 566   capped   565/565
(100 %)
4 diff
(99.3 %id)
DA917838 small intestine .a 1 to 577 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
AK292644 thymus .a 3 to 1042 9 to 1049 A104P     1041/1041
(100 %)
3 diff
(99.8 %id)
DB125601 thymus .a 3 to 506 9 to 512   capped   504/504
(100 %)
2 diff
(99.7 %id)
AW403726 lymph .a 4 to 463 1 to 460       460/460
(100 %)
8 diff
(98.3 %id)
DR006932 Spleen .a 5 to 547 32 to 574       543/574
(94 %)
6 diff
(99.0 %id)
TI_154159772   .a 7 to 493 85 to 570       486/486
(100 %)
4 diff
(99.2 %id)
TI_154140485   .a 11 to 671 81 to 738       658/701
(93 %)
25 diff
(96.5 %id)
BF794260 lymph, lymphoma, cell line .a 14 to 765 1 to 761       761/842
(90 %)
15 diff
(98.3 %id)
BM456195 lymph, lymphoma, cell line .a 14 to 835 1 to 829 K244Q L255A L256A P257A A258L ...     829/834
(99 %)
15 diff
(98.3 %id)
BG754395 B-cells, primary B-cells from tonsils (cell line) .a 17 to 673 1 to 657       657/658
(99 %)
3 diff
(99.6 %id)
X66079   .a 17 to 1463 1 to 1448 exact     1448/1448
(100 %)
5 diff
(99.7 %id)
X96998   .a 17 to 1463 1 to 1444 A163G G164L T165A K167S K168C ...     1448/1444
(100 %)
7 diff
(99.6 %id)
BC007921 Primary B-Cells from Tonsils .a 18 to 1463 1 to 1447 exact available from MGC, AAA   1447/1447
(100 %)
5 diff
(99.7 %id)
BM458591 lymph, lymphoma, cell line .a 18 to 902 1 to 899 R219P K220Q N233K K246Q L247A ...     899/1104
(81 %)
32 diff
(97.2 %id)
DA952345 Spleen .a 20 to 584 2 to 566   capped   565/565
(100 %)
5 diff
(99.2 %id)
TI_1948101672   .a 21 to 799 130 to 921   fully sequenced,   792/921
(85 %)
42 diff
(95.5 %id)
TI_1948101835   .a 21 to 769 133 to 892       760/1481
(51 %)
26 diff
(98.3 %id)
TI_1948102002   .a 21 to 807 132 to 923       792/1404
(56 %)
31 diff
(97.8 %id)
CV027056 mixed .a 22 to 677 1 to 656       656/656
(100 %)
5 diff
(99.3 %id)
AW404895 lymph .a 27 to 462 8 to 443       436/443
(98 %)
9 diff
(98.0 %id)
BF795301 lymph, lymphoma, cell line .a 27 to 481 1 to 464       464/1196
(38 %)
18 diff
(98.5 %id)
TI_154141900   .a 27 to 695 80 to 748       669/723
(92 %)
44 diff
(94.0 %id)
TI_154138425   .a 40 to 645 71 to 676       606/607
(99 %)
6 diff
(99.1 %id)
AW402112 lymph .a 45 to 504 12 to 471       460/471
(97 %)
8 diff
(98.4 %id)
BM464752 lymph, lymphoma, cell line .a 45 to 1002 6 to 962       957/962
(99 %)
18 diff
(98.2 %id)
BX282291 lymph, lymphoma, cell line .a 52 to 509 1 to 458       458/458
(100 %)
1 diff
(99.8 %id)
BM477403 lymph, lymphoma, cell line .a 55 to 961 1 to 912       912/1067
(85 %)
13 diff
(98.8 %id)
BG106351 lymph, lymphoma, cell line .a 60 to 522 1 to 466       466/967
(48 %)
17 diff
(98.3 %id)
BQ061450 lymph, lymphoma, cell line .a 62 to 981 1 to 930       930/997
(93 %)
22 diff
(97.8 %id)
BQ642509 lymph, lymphoma, cell line .a 62 to 953 1 to 898       898/902
(99 %)
29 diff
(96.8 %id)
CR591146 B cells (Ramos cell line) Cot 25-normalized .a 69 to 1414 1 to 1346   tiling clone,   1346/1346
(100 %)
0 diff
(100 %id)
AL560667 B cells from Burkitt lymphoma .a 69 to 522 1 to 455       455/967
(47 %)
11 diff
(98.9 %id)
AW407349 lymph .a 110 to 212 8 to 110       103/110
(93 %)
6 diff
(94.6 %id)
BQ056238 lymph, lymphoma, cell line .a 127 to 1011 1 to 904       904/1010
(89 %)
31 diff
(97.0 %id)
BQ063065 lymph, lymphoma, cell line .a 127 to 936 1 to 819       819/1040
(78 %)
12 diff
(98.9 %id)
BQ064924 lymph, lymphoma, cell line .a 127 to 1011 1 to 894       894/1035
(86 %)
23 diff
(97.8 %id)
BF795477 lymph, lymphoma, cell line .a 271 to 1098 1 to 828       828/1056
(78 %)
30 diff
(97.2 %id)
BM459428 lymph, lymphoma, cell line .a 315 to 847 9 to 547       535/1085
(49 %)
16 diff
(98.6 %id)
TI_1948101673   .a 421 to 813 507 to 114   fully sequenced,   394/507
(77 %)
0 diff
(100 %id)
AL582076 B cells from Burkitt lymphoma .a 540 to 1414 875 to 1       875/1051
(83 %)
5 diff
(99.6 %id)
TI_57179781   .a 558 to 1351 58 to 854       797/854
(93 %)
9 diff
(99.0 %id)
BI770510 pooled lung and spleen .a 570 to 1351 1 to 784       784/784
(100 %)
3 diff
(99.7 %id)
AW408335 lymph .a 601 to 1172 8 to 580       573/580
(98 %)
6 diff
(99.0 %id)
TI_57231920   .a 601 to 1465 30 to 892       863/900
(95 %)
14 diff
(98.5 %id)
TI_154147814   .a 601 to 1259 81 to 740       660/664
(99 %)
6 diff
(99.1 %id)
BI905846 leukocyte .a 605 to 1465 1 to 859       859/867
(99 %)
12 diff
(98.7 %id)
BG754034 B-cells, primary B-cells from tonsils (cell line) .a 634 to 1389 1 to 757       757/757
(100 %)
3 diff
(99.7 %id)
BG759397 B-cells, primary B-cells from tonsils (cell line) .a 634 to 1261 1 to 641       641/641
(100 %)
10 diff
(98.5 %id)
AW405298 lymph .a 649 to 1027 1 to 380       380/380
(100 %)
7 diff
(98.2 %id)
TI_154142533   .a 656 to 1325 91 to 763   AAA   673/754
(89 %)
39 diff
(94.9 %id)
TI_57165634   .a 706 to 1442 31 to 770       740/924
(80 %)
15 diff
(98.4 %id)
BI837556 pooled pancreas and spleen .a 712 to 1442 1 to 734       734/888
(82 %)
11 diff
(98.8 %id)
AA490435 germinal center B cell .a 718 to 973 1 to 255       255/255
(100 %)
5 diff
(98.1 %id)
BG341042 B-cells, primary B-cells from tonsils (cell line) .a 747 to 1462 1 to 716   AAA   716/716
(100 %)
12 diff
(98.4 %id)
BQ057133 lymph, lymphoma, cell line .a 749 to 1471 1 to 727       727/742
(97 %)
11 diff
(98.6 %id)
BQ064401 lymph, lymphoma, cell line .a 749 to 1466 1 to 719   AAA   719/719
(100 %)
1 diff
(99.9 %id)
W01642 liver and spleen .a 811 to 1196 1 to 386   fully sequenced,   386/386
(100 %)
8 diff
(98.0 %id)
AW293596   .a 875 to 1344 488 to 18   AAA   471/471
(100 %)
1 diff
(99.8 %id)
AW449379   .a 904 to 1344 459 to 18   AAA   442/442
(100 %)
1 diff
(99.8 %id)
BI261618 lymph, lymphoma, cell line .a 944 to 1463 1 to 521   AAA   521/521
(100 %)
2 diff
(99.7 %id)
AW182312 pooled .a 987 to 1450 467 to 3       465/467
(99 %)
0 diff
(100 %id)
AW293044   .a 1023 to 1463 457 to 18   AAA   440/440
(100 %)
2 diff
(99.6 %id)
AA806457 germinal center B cell .a 1049 to 1432 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
T28745 heart .a 1072 to 1308 1 to 237       237/237
(100 %)
1 diff
(99.6 %id)
AW291958   .a 1106 to 1463 375 to 18   AAA   358/365
(98 %)
1 diff
(99.8 %id)
AI950207 pooled germ cell tumors .a 1117 to 1463 352 to 6       347/352
(98 %)
0 diff
(100 %id)
N71628 liver and spleen .a 1166 to 1463 329 to 24   fully sequenced, AAA   306/306
(100 %)
3 diff
(99.1 %id)
BG684166 B-cells, primary B-cells from tonsils (cell line) .a 1275 to 1467 651 to 844       819/852
(96 %)
22 diff
(97.5 %id)
CD701483 normal nasopharynx .a 1373 to 2051 47 to 724       678/724
(93 %)
6 diff
(99.2 %id)
AW474881 lymph node, lymphoma, follicular mixed small and largecell .a 1374 to 1463 90 to 1       90/90
(100 %)
0 diff
(100 %id)
AK025419 colon mucosa .a 1569 to 3787 1 to 2220   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 2220/2220
(100 %)
7 diff
(99.7 %id)
AW402468 lymph .a 1653 to 2073 1 to 421   tiling clone,   421/421
(100 %)
6 diff
(98.6 %id)
TI_154138848   .a 1659 to 2181 80 to 602   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 523/523
(100 %)
2 diff
(99.7 %id)
TI_154188671   .a 2571 to 3343 121 to 886   tiling clone,   766/906
(84 %)
15 diff
(98.4 %id)
BF663596 B-cells, primary B-cells from tonsils (cell line) .a 3010 to 3520 1 to 514   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 514/514
(100 %)
4 diff
(99.3 %id)
BG684911 B-cells, primary B-cells from tonsils (cell line) .a 3010 to 3520 1 to 519   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 519/519
(100 %)
20 diff
(96.2 %id)
CD708956 normal nasopharynx .a 3015 to 3336 20 to 340       321/340
(94 %)
6 diff
(98.3 %id)
AW968599   .a 3146 to 3521 377 to 1     Submitted on the opposite strand 377/623
(60 %)
10 diff
(98.4 %id)
AA465158 germinal center B cell .a 3146 to 3523 379 to 1       379/394
(96 %)
6 diff
(98.5 %id)
GD140573   .a 3374 to 3527 1 to 154       154/159
(96 %)
3 diff
(98.2 %id)
AW406185 lymph .b 1 to 398 1 to 398   tiling clone,   398/398
(100 %)
5 diff
(98.8 %id)
TI_154143674   .b 8 to 551 81 to 624 L121P T141Y W154L M167D W171L ... tiling clone,   544/545
(99 %)
10 diff
(98.2 %id)
DA957305 Spleen .c 1 to 566 3 to 569 V22S F23L Y24L D25* tiling clone, capped   568/568
(100 %)
3 diff
(99.5 %id)
AK300639 rectum .d 1 to 846 3 to 849 exact tiling clone,   849/849
(100 %)
2 diff
(99.8 %id)
DC385357 rectum .d 1 to 570 3 to 572       572/572
(100 %)
1 diff
(99.9 %id)
BG025013 lymph, lymphoma, cell line .d 13 to 845 1 to 842 K155S L156S T157P Y158T Q159S ...     842/866
(97 %)
53 diff
(93.9 %id)
DB116679 thymus .e 1 to 520 3 to 522 A104P tiling clone, capped   521/521
(100 %)
2 diff
(99.7 %id)
AW406765 lymph .e 3 to 360 1 to 358       358/364
(98 %)
9 diff
(97.6 %id)
DA957263 Spleen .f 1 to 563 2 to 564 A104P tiling clone, capped   563/563
(100 %)
2 diff
(99.7 %id)
AW500536 lymph .g 1 to 534 5 to 538 exact tiling clone, Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 538/538
(100 %)
6 diff
(98.9 %id)
AW500539 lymph .g 1 to 538 5 to 542 exact   Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 542/542
(100 %)
6 diff
(98.9 %id)
TI_154154752   .g 4 to 640 80 to 715 exact tiling clone,   636/636
(100 %)
8 diff
(98.8 %id)
TI_154154802   .g 4 to 642 80 to 712 exact tiling clone,   633/634
(99 %)
14 diff
(97.8 %id)
AW576312 lymph .g 3233 to 3480 265 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 248/248
(100 %)
2 diff
(99.2 %id)
AW576310 lymph .g 3283 to 3480 215 to 18   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 198/198
(100 %)
1 diff
(99.5 %id)
DA956295 Spleen .h 1 to 575 4 to 578 exact tiling clone, to resequence, capped   577/577
(100 %)
1 diff
(99.9 %id)
DB334019 Spleen .h 1235 to 1794 564 to 5   tiling clone, to resequence,   560/564
(99 %)
0 diff
(100 %id)
BQ712623 Spleen .i-u 1 to 667 1 to 667   tiling clone,   667/939
(71 %)
20 diff
(97.9 %id)
AW294376   .i-u 591 to 884 310 to 18   tiling clone, AAA   293/303
(96 %)
1 diff
(99.7 %id)
DA935557 Spleen Gene SPIB, variant not shown       capped      
DB332814 Spleen Gene SPIB, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI