AceView: Gene:SPIB, a comprehensive annotation of human, mouse and worm genes with mRNAs or ESTsAceView.

Alternative mRNAs are shown aligned from 5' to 3' on a virtual genome where introns have been shrunk to a minimal length. Exon size is proportional to length, intron height reflects the number of cDNAs supporting each intron, the small numbers show the support of the introns in deep sequencing (with details in mouse-over) . Introns of the same color are identical, of different colors are different. 'Good proteins' are pink, partial or not-good proteins are yellow, uORFs are green. 5' cap or3' poly A flags show completeness of the transcript.
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cDNA accession Links to the sequence	Tissue most 5' clones in red	Match mRNA	From bp to bp in mRNA	From bp to bp in accs.	Clone encodes complete protein (with AA variation)	Features	Anomalies detected by AceView	Accession match over (% length)	Base differences relative to genome (% identity)
BM152265	leukopheresis	.a	1 to 491	6 to 496				496/496 (100 %)	3 diff (99.4 %id)
AK225720	thymus	.a	1 to 1466	5 to 1471	K30R A104P S253G	AAA		1471/1471 (100 %)	6 diff (99.6 %id)
NM_003121.3		.a	1 to 1466	5 to 1471	exact	RefSeq, AAA		1471/1471 (100 %)	2 diff (99.9 %id)
BP368482	thymus	.a	1 to 576	5 to 580				580/580 (100 %)	3 diff (99.5 %id)
AK225225	colon	.a	1 to 3524	3 to 3528	A104P	tiling clone, AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	3528/3528 (100 %)	9 diff (99.8 %id)
AU098646		.a	1 to 298	3 to 300				300/300 (100 %)	4 diff (98.7 %id)
DA819024		.a	1 to 554	4 to 557		capped		556/556 (100 %)	4 diff (99.3 %id)
AW503820	lymph	.a	1 to 415	2 to 416				416/416 (100 %)	7 diff (98.4 %id)
BP324469	Pancreas	.a	1 to 480	2 to 481				481/586 (82 %)	25 diff (95.8 %id)
DA948461	Spleen	.a	1 to 536	3 to 541		capped		540/540 (100 %)	7 diff (98.8 %id)
DA954078	Spleen	.a	1 to 573	3 to 575		capped		574/574 (100 %)	2 diff (99.7 %id)
DA958449	Spleen	.a	1 to 554	3 to 556		capped		555/555 (100 %)	3 diff (99.5 %id)
DA813912		.a	1 to 565	2 to 566		capped		565/565 (100 %)	4 diff (99.3 %id)
DA917838	small intestine	.a	1 to 577	2 to 578		capped		577/577 (100 %)	2 diff (99.7 %id)
AK292644	thymus	.a	3 to 1042	9 to 1049	A104P			1041/1041 (100 %)	3 diff (99.8 %id)
DB125601	thymus	.a	3 to 506	9 to 512		capped		504/504 (100 %)	2 diff (99.7 %id)
AW403726	lymph	.a	4 to 463	1 to 460				460/460 (100 %)	8 diff (98.3 %id)
DR006932	Spleen	.a	5 to 547	32 to 574				543/574 (94 %)	6 diff (99.0 %id)
TI_154159772		.a	7 to 493	85 to 570				486/486 (100 %)	4 diff (99.2 %id)
TI_154140485		.a	11 to 671	81 to 738				658/701 (93 %)	25 diff (96.5 %id)
BF794260	lymph, lymphoma, cell line	.a	14 to 765	1 to 761				761/842 (90 %)	15 diff (98.3 %id)
BM456195	lymph, lymphoma, cell line	.a	14 to 835	1 to 829	K244Q L255A L256A P257A A258L ...			829/834 (99 %)	15 diff (98.3 %id)
BG754395	B-cells, primary B-cells from tonsils (cell line)	.a	17 to 673	1 to 657				657/658 (99 %)	3 diff (99.6 %id)
X66079		.a	17 to 1463	1 to 1448	exact			1448/1448 (100 %)	5 diff (99.7 %id)
X96998		.a	17 to 1463	1 to 1444	A163G G164L T165A K167S K168C ...			1448/1444 (100 %)	7 diff (99.6 %id)
BC007921	Primary B-Cells from Tonsils	.a	18 to 1463	1 to 1447	exact	available from MGC, AAA		1447/1447 (100 %)	5 diff (99.7 %id)
BM458591	lymph, lymphoma, cell line	.a	18 to 902	1 to 899	R219P K220Q N233K K246Q L247A ...			899/1104 (81 %)	32 diff (97.2 %id)
DA952345	Spleen	.a	20 to 584	2 to 566		capped		565/565 (100 %)	5 diff (99.2 %id)
TI_1948101672		.a	21 to 799	130 to 921		fully sequenced,		792/921 (85 %)	42 diff (95.5 %id)
TI_1948101835		.a	21 to 769	133 to 892				760/1481 (51 %)	26 diff (98.3 %id)
TI_1948102002		.a	21 to 807	132 to 923				792/1404 (56 %)	31 diff (97.8 %id)
CV027056	mixed	.a	22 to 677	1 to 656				656/656 (100 %)	5 diff (99.3 %id)
AW404895	lymph	.a	27 to 462	8 to 443				436/443 (98 %)	9 diff (98.0 %id)
BF795301	lymph, lymphoma, cell line	.a	27 to 481	1 to 464				464/1196 (38 %)	18 diff (98.5 %id)
TI_154141900		.a	27 to 695	80 to 748				669/723 (92 %)	44 diff (94.0 %id)
TI_154138425		.a	40 to 645	71 to 676				606/607 (99 %)	6 diff (99.1 %id)
AW402112	lymph	.a	45 to 504	12 to 471				460/471 (97 %)	8 diff (98.4 %id)
BM464752	lymph, lymphoma, cell line	.a	45 to 1002	6 to 962				957/962 (99 %)	18 diff (98.2 %id)
BX282291	lymph, lymphoma, cell line	.a	52 to 509	1 to 458				458/458 (100 %)	1 diff (99.8 %id)
BM477403	lymph, lymphoma, cell line	.a	55 to 961	1 to 912				912/1067 (85 %)	13 diff (98.8 %id)
BG106351	lymph, lymphoma, cell line	.a	60 to 522	1 to 466				466/967 (48 %)	17 diff (98.3 %id)
BQ061450	lymph, lymphoma, cell line	.a	62 to 981	1 to 930				930/997 (93 %)	22 diff (97.8 %id)
BQ642509	lymph, lymphoma, cell line	.a	62 to 953	1 to 898				898/902 (99 %)	29 diff (96.8 %id)
CR591146	B cells (Ramos cell line) Cot 25-normalized	.a	69 to 1414	1 to 1346		tiling clone,		1346/1346 (100 %)	0 diff (100 %id)
AL560667	B cells from Burkitt lymphoma	.a	69 to 522	1 to 455				455/967 (47 %)	11 diff (98.9 %id)
AW407349	lymph	.a	110 to 212	8 to 110				103/110 (93 %)	6 diff (94.6 %id)
BQ056238	lymph, lymphoma, cell line	.a	127 to 1011	1 to 904				904/1010 (89 %)	31 diff (97.0 %id)
BQ063065	lymph, lymphoma, cell line	.a	127 to 936	1 to 819				819/1040 (78 %)	12 diff (98.9 %id)
BQ064924	lymph, lymphoma, cell line	.a	127 to 1011	1 to 894				894/1035 (86 %)	23 diff (97.8 %id)
BF795477	lymph, lymphoma, cell line	.a	271 to 1098	1 to 828				828/1056 (78 %)	30 diff (97.2 %id)
BM459428	lymph, lymphoma, cell line	.a	315 to 847	9 to 547				535/1085 (49 %)	16 diff (98.6 %id)
TI_1948101673		.a	421 to 813	507 to 114		fully sequenced,		394/507 (77 %)	0 diff (100 %id)
AL582076	B cells from Burkitt lymphoma	.a	540 to 1414	875 to 1				875/1051 (83 %)	5 diff (99.6 %id)
TI_57179781		.a	558 to 1351	58 to 854				797/854 (93 %)	9 diff (99.0 %id)
BI770510	pooled lung and spleen	.a	570 to 1351	1 to 784				784/784 (100 %)	3 diff (99.7 %id)
AW408335	lymph	.a	601 to 1172	8 to 580				573/580 (98 %)	6 diff (99.0 %id)
TI_57231920		.a	601 to 1465	30 to 892				863/900 (95 %)	14 diff (98.5 %id)
TI_154147814		.a	601 to 1259	81 to 740				660/664 (99 %)	6 diff (99.1 %id)
BI905846	leukocyte	.a	605 to 1465	1 to 859				859/867 (99 %)	12 diff (98.7 %id)
BG754034	B-cells, primary B-cells from tonsils (cell line)	.a	634 to 1389	1 to 757				757/757 (100 %)	3 diff (99.7 %id)
BG759397	B-cells, primary B-cells from tonsils (cell line)	.a	634 to 1261	1 to 641				641/641 (100 %)	10 diff (98.5 %id)
AW405298	lymph	.a	649 to 1027	1 to 380				380/380 (100 %)	7 diff (98.2 %id)
TI_154142533		.a	656 to 1325	91 to 763		AAA		673/754 (89 %)	39 diff (94.9 %id)
TI_57165634		.a	706 to 1442	31 to 770				740/924 (80 %)	15 diff (98.4 %id)
BI837556	pooled pancreas and spleen	.a	712 to 1442	1 to 734				734/888 (82 %)	11 diff (98.8 %id)
AA490435	germinal center B cell	.a	718 to 973	1 to 255				255/255 (100 %)	5 diff (98.1 %id)
BG341042	B-cells, primary B-cells from tonsils (cell line)	.a	747 to 1462	1 to 716		AAA		716/716 (100 %)	12 diff (98.4 %id)
BQ057133	lymph, lymphoma, cell line	.a	749 to 1471	1 to 727				727/742 (97 %)	11 diff (98.6 %id)
BQ064401	lymph, lymphoma, cell line	.a	749 to 1466	1 to 719		AAA		719/719 (100 %)	1 diff (99.9 %id)
W01642	liver and spleen	.a	811 to 1196	1 to 386		fully sequenced,		386/386 (100 %)	8 diff (98.0 %id)
AW293596		.a	875 to 1344	488 to 18		AAA		471/471 (100 %)	1 diff (99.8 %id)
AW449379		.a	904 to 1344	459 to 18		AAA		442/442 (100 %)	1 diff (99.8 %id)
BI261618	lymph, lymphoma, cell line	.a	944 to 1463	1 to 521		AAA		521/521 (100 %)	2 diff (99.7 %id)
AW182312	pooled	.a	987 to 1450	467 to 3				465/467 (99 %)	0 diff (100 %id)
AW293044		.a	1023 to 1463	457 to 18		AAA		440/440 (100 %)	2 diff (99.6 %id)
AA806457	germinal center B cell	.a	1049 to 1432	383 to 1				383/383 (100 %)	1 diff (99.8 %id)
T28745	heart	.a	1072 to 1308	1 to 237				237/237 (100 %)	1 diff (99.6 %id)
AW291958		.a	1106 to 1463	375 to 18		AAA		358/365 (98 %)	1 diff (99.8 %id)
AI950207	pooled germ cell tumors	.a	1117 to 1463	352 to 6				347/352 (98 %)	0 diff (100 %id)
N71628	liver and spleen	.a	1166 to 1463	329 to 24		fully sequenced, AAA		306/306 (100 %)	3 diff (99.1 %id)
BG684166	B-cells, primary B-cells from tonsils (cell line)	.a	1275 to 1467	651 to 844				819/852 (96 %)	22 diff (97.5 %id)
CD701483	normal nasopharynx	.a	1373 to 2051	47 to 724				678/724 (93 %)	6 diff (99.2 %id)
AW474881	lymph node, lymphoma, follicular mixed small and largecell	.a	1374 to 1463	90 to 1				90/90 (100 %)	0 diff (100 %id)
AK025419	colon mucosa	.a	1569 to 3787	1 to 2220		tiling clone, available from FLJ, AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	2220/2220 (100 %)	7 diff (99.7 %id)
AW402468	lymph	.a	1653 to 2073	1 to 421		tiling clone,		421/421 (100 %)	6 diff (98.6 %id)
TI_154138848		.a	1659 to 2181	80 to 602		AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	523/523 (100 %)	2 diff (99.7 %id)
TI_154188671		.a	2571 to 3343	121 to 886		tiling clone,		766/906 (84 %)	15 diff (98.4 %id)
BF663596	B-cells, primary B-cells from tonsils (cell line)	.a	3010 to 3520	1 to 514		tiling clone, AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	514/514 (100 %)	4 diff (99.3 %id)
BG684911	B-cells, primary B-cells from tonsils (cell line)	.a	3010 to 3520	1 to 519		AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	519/519 (100 %)	20 diff (96.2 %id)
CD708956	normal nasopharynx	.a	3015 to 3336	20 to 340				321/340 (94 %)	6 diff (98.3 %id)
AW968599		.a	3146 to 3521	377 to 1			Submitted on the opposite strand	377/623 (60 %)	10 diff (98.4 %id)
AA465158	germinal center B cell	.a	3146 to 3523	379 to 1				379/394 (96 %)	6 diff (98.5 %id)
GD140573		.a	3374 to 3527	1 to 154				154/159 (96 %)	3 diff (98.2 %id)
AW406185	lymph	.b	1 to 398	1 to 398		tiling clone,		398/398 (100 %)	5 diff (98.8 %id)
TI_154143674		.b	8 to 551	81 to 624	L121P T141Y W154L M167D W171L ...	tiling clone,		544/545 (99 %)	10 diff (98.2 %id)
DA957305	Spleen	.c	1 to 566	3 to 569	V22S F23L Y24L D25*	tiling clone, capped		568/568 (100 %)	3 diff (99.5 %id)
AK300639	rectum	.d	1 to 846	3 to 849	exact	tiling clone,		849/849 (100 %)	2 diff (99.8 %id)
DC385357	rectum	.d	1 to 570	3 to 572				572/572 (100 %)	1 diff (99.9 %id)
BG025013	lymph, lymphoma, cell line	.d	13 to 845	1 to 842	K155S L156S T157P Y158T Q159S ...			842/866 (97 %)	53 diff (93.9 %id)
DB116679	thymus	.e	1 to 520	3 to 522	A104P	tiling clone, capped		521/521 (100 %)	2 diff (99.7 %id)
AW406765	lymph	.e	3 to 360	1 to 358				358/364 (98 %)	9 diff (97.6 %id)
DA957263	Spleen	.f	1 to 563	2 to 564	A104P	tiling clone, capped		563/563 (100 %)	2 diff (99.7 %id)
AW500536	lymph	.g	1 to 534	5 to 538	exact	tiling clone,	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	538/538 (100 %)	6 diff (98.9 %id)
AW500539	lymph	.g	1 to 538	5 to 542	exact		Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	542/542 (100 %)	6 diff (98.9 %id)
TI_154154752		.g	4 to 640	80 to 715	exact	tiling clone,		636/636 (100 %)	8 diff (98.8 %id)
TI_154154802		.g	4 to 642	80 to 712	exact	tiling clone,		633/634 (99 %)	14 diff (97.8 %id)
AW576312	lymph	.g	3233 to 3480	265 to 18		tiling clone, AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	248/248 (100 %)	2 diff (99.2 %id)
AW576310	lymph	.g	3283 to 3480	215 to 18		AAA	Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base)	198/198 (100 %)	1 diff (99.5 %id)
DA956295	Spleen	.h	1 to 575	4 to 578	exact	tiling clone, to resequence, capped		577/577 (100 %)	1 diff (99.9 %id)
DB334019	Spleen	.h	1235 to 1794	564 to 5		tiling clone, to resequence,		560/564 (99 %)	0 diff (100 %id)
BQ712623	Spleen	.i-u	1 to 667	1 to 667		tiling clone,		667/939 (71 %)	20 diff (97.9 %id)
AW294376		.i-u	591 to 884	310 to 18		tiling clone, AAA		293/303 (96 %)	1 diff (99.7 %id)
DA935557	Spleen	Gene SPIB, variant not shown				capped
DB332814	Spleen	Gene SPIB, variant not shown