To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SOS1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
414 supporting clones for gene SOS1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA740859 germinal center B cell .a 1 to 597 1 to 586   tiling clone, Submitted on the opposite strand 586/592
(98 %)
25 diff
(95.8 %id)
NM_005633.3   .a 239 to 8554 1 to 8316 exact RefSeq, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 8316/8316
(100 %)
0 diff
(100 %id)
CA406153 adipose .a 252 to 856 1 to 604       604/615
(98 %)
10 diff
(98.4 %id)
DR001761 fetal brain .a 254 to 974 8 to 728   tiling clone,   721/728
(99 %)
2 diff
(99.8 %id)
ES310772 scalp interfollicular dermis, skin .a 257 to 902 1 to 638       638/643
(99 %)
10 diff
(98.5 %id)
L13857 brain .a 280 to 4281 1 to 4002 exact tiling clone,   4002/4002
(100 %)
0 diff
(100 %id)
AW503085 lymph .a 438 to 958 8 to 528       521/528
(98 %)
1 diff
(99.9 %id)
TI_154158867   .a 438 to 1103 89 to 751       663/663
(100 %)
24 diff
(96.4 %id)
CD656113 Embryonic Stem cells .a 494 to 1260 6 to 765       760/805
(94 %)
52 diff
(93.6 %id)
CN403149 embryonic stem cells, cell lines H1, H7, andH9 .a 500 to 971 1 to 474       474/474
(100 %)
2 diff
(99.6 %id)
BP279524   .a 571 to 1159 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
BU430198 lymph .a 631 to 1130 8 to 507       500/507
(98 %)
2 diff
(99.7 %id)
TI_154151498   .a 631 to 1286 81 to 736       656/658
(99 %)
23 diff
(96.6 %id)
DB212522 trachea .a 761 to 1220 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
BF806099 colon_ins .a 786 to 1107 1 to 321       321/321
(100 %)
4 diff
(98.8 %id)
AI168374 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 802 to 1367 566 to 1       566/566
(100 %)
2 diff
(99.7 %id)
BE147598 head_neck .a 964 to 1513 560 to 9     Submitted on the opposite strand 552/568
(97 %)
3 diff
(99.5 %id)
BF350393 head_neck .a 964 to 1481 566 to 48       519/627
(82 %)
8 diff
(98.8 %id)
EH348691   .a 1201 to 1252 1 to 52       52/52
(100 %)
0 diff
(100 %id)
DA232411 brain .a 1259 to 1827 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BE699420 nervous_normal .a 1354 to 1569 1 to 217       217/217
(100 %)
3 diff
(98.7 %id)
BF362746 nervous_normal .a 1354 to 1539 1 to 185       185/185
(100 %)
2 diff
(99.0 %id)
BF362768 nervous_normal .a 1354 to 1565 208 to 1       208/208
(100 %)
6 diff
(97.2 %id)
BF955971 nervous_normal .a 1354 to 1569 230 to 14       217/230
(94 %)
2 diff
(99.2 %id)
DB275400 uterus .a 1359 to 1929 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BP281305 bone marrow .a 1369 to 1949 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
BP361053 thalamus .a 1377 to 1955 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
BP361365 thalamus .a 1377 to 1958 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE147597 head_neck .a 1379 to 1513 138 to 2     Submitted on the opposite strand 137/138
(99 %)
2 diff
(98.6 %id)
DA468899   .a 1514 to 2091 2 to 579   capped   578/579
(99 %)
1 diff
(99.9 %id)
DA219617 brain .a 1691 to 2251 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
EH308293   .a 1702 to 1780 1 to 80       80/80
(100 %)
1 diff
(98.8 %id)
DA770739 brain .a 1764 to 2344 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA805980 brain .a 1849 to 2440 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
BU932488 mixed (pool of 40 RNAs) .a 1917 to 2696 1 to 781       781/783
(99 %)
10 diff
(98.8 %id)
DA914147   .a 2043 to 2602 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA994994 synovial membrane tissue from rheumatioidarthritis .a 2127 to 2677 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB292211 uterus .a 2143 to 2722 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB108511 thymus .a 2150 to 2731 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
BE618952 large cell carcinoma, lung .a 2193 to 2950 1 to 756       756/890
(84 %)
18 diff
(98.0 %id)
AL603131 human skeletal muscle .a 2205 to 2792 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
CA390299 eye, RPE/choroid .a 2206 to 2775 1 to 570       570/570
(100 %)
0 diff
(100 %id)
AA054071 eye, retina .a 2208 to 2669 1 to 462       462/463
(99 %)
4 diff
(99.2 %id)
FN167121 breast carcinoma .a 2219 to 2315 97 to 1     Submitted on the opposite strand 97/97
(100 %)
0 diff
(100 %id)
DA761203 tongue .a 2308 to 2555 2 to 249   capped   248/248
(100 %)
0 diff
(100 %id)
DA777786 brain .a 2393 to 2960 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BM807566 brain, hippocampus .a 2419 to 3360 17 to 971       953/1173
(81 %)
36 diff
(97.0 %id)
DN915379   .a 2425 to 2898 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
F05114 brain, total brain .a 2459 to 2701 1 to 243       243/243
(100 %)
0 diff
(100 %id)
BM903830 eye, retinoblastoma .a 2517 to 3319 12 to 825       814/915
(88 %)
13 diff
(98.6 %id)
BP247560 Kidney .a 2558 to 3139 1 to 582       582/587
(99 %)
5 diff
(99.2 %id)
BP238678 Liver .a 2632 to 3241 1 to 610       610/610
(100 %)
3 diff
(99.6 %id)
BE005296 breast_normal .a 2783 to 3108 329 to 3     Submitted on the opposite strand 328/330
(99 %)
9 diff
(97.3 %id)
DA573635   .a 2942 to 3494 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
CN403152 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2980 to 3740 1 to 761       761/761
(100 %)
3 diff
(99.7 %id)
DA526690 brain .a 3024 to 3574 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BE393405 endometrium, adenocarcinoma cell line, uterus .a 3117 to 3613 1 to 498       498/499
(99 %)
2 diff
(99.6 %id)
BF924825 nervous_tumor .a 3166 to 3549 1 to 386       386/387
(99 %)
4 diff
(99.0 %id)
AW856226 colon .a 3221 to 3562 339 to 2       338/368
(91 %)
12 diff
(96.8 %id)
BE271423 adenocarcinoma cell line, ovary .a 3234 to 3660 1 to 427       427/427
(100 %)
0 diff
(100 %id)
BG821637 adenocarcinoma cell line, colon .a 3264 to 4054 1 to 793       793/794
(99 %)
8 diff
(99.0 %id)
H64324 liver and spleen .a 3332 to 3729 1 to 402       402/403
(99 %)
10 diff
(97.6 %id)
DN915378   .a 3344 to 3571 228 to 1       228/228
(100 %)
3 diff
(98.7 %id)
BP292779 lung .a 3403 to 3952 1 to 550       550/550
(100 %)
5 diff
(99.1 %id)
BF904276 marrow .a 3411 to 3877 1 to 465       465/465
(100 %)
16 diff
(96.6 %id)
BF904279 marrow .a 3412 to 3963 9 to 557       549/557
(98 %)
15 diff
(97.4 %id)
BF804735 colon_ins .a 3440 to 3819 402 to 25     Submitted on the opposite strand 378/413
(91 %)
3 diff
(99.3 %id)
AW994449 breast_normal .a 3449 to 3729 14 to 291       278/291
(95 %)
0 diff
(100 %id)
BI258347 cervical carcinoma cell line, cervix .a 3485 to 4418 1 to 943       943/945
(99 %)
11 diff
(98.9 %id)
BU929281 placenta .a 3641 to 4396 1 to 763       763/763
(100 %)
11 diff
(98.6 %id)
BQ318671 colon .a 3662 to 3939 277 to 3       275/277
(99 %)
5 diff
(98.2 %id)
CN403150 embryonic stem cells, cell lines H1, H7, andH9 .a 3672 to 4376 1 to 703       703/703
(100 %)
2 diff
(99.8 %id)
BF808470 colon_ins .a 3680 to 3950 274 to 4     Submitted on the opposite strand 271/274
(98 %)
0 diff
(100 %id)
AA029681.
matches multiple genes
heart .a 3702 to 3927 1 to 226     also hits gene ADAMTSL3 226/226
(100 %)
2 diff
(99.2 %id)
EH351500   .a 3783 to 3865 1 to 84       84/84
(100 %)
4 diff
(95.3 %id)
CB107736 Liver .a 3821 to 4236 1 to 416       416/416
(100 %)
1 diff
(99.8 %id)
DT220461 brain .a 3870 to 4453 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BM727902 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3892 to 4598 1 to 705       705/713
(98 %)
5 diff
(99.3 %id)
AA448955.
matches multiple genes
  .a 3893 to 4379 1 to 486     also hits gene LOC339290 486/486
(100 %)
1 diff
(99.8 %id)
CN403147 embryonic stem cells, cell lines H1, H7, andH9 .a 3928 to 4677 1 to 751       751/751
(100 %)
1 diff
(99.9 %id)
AA744878 germinal center B cell .a 3955 to 4681 731 to 1   tiling clone,   731/731
(100 %)
22 diff
(97.0 %id)
BF998847 placenta_normal .a 3991 to 4469 498 to 19       480/498
(96 %)
0 diff
(100 %id)
BG980399 colon_normal .a 4009 to 4436 435 to 9       427/435
(98 %)
2 diff
(99.6 %id)
AA029688 heart .a 4057 to 4618 569 to 1       569/569
(100 %)
14 diff
(97.6 %id)
DA211154 brain .a 4073 to 4420 150 to 498   capped   349/497
(70 %)
0 diff
(100 %id)
R18229 whole brain .a 4079 to 4477 1 to 411       411/434
(94 %)
18 diff
(95.9 %id)
R21453 whole brain .a 4079 to 4412 1 to 346       346/366
(94 %)
11 diff
(97.0 %id)
BE540149 cervix .a 4080 to 4640 28 to 595       568/595
(95 %)
0 diff
(100 %id)
DA020753   .a 4085 to 4632 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BI334975 cervical carcinoma cell line, cervix .a 4103 to 4895 1 to 800       800/948
(84 %)
14 diff
(98.6 %id)
BI333777 cervical carcinoma cell line, cervix .a 4104 to 4607 1 to 505       505/557
(90 %)
2 diff
(99.7 %id)
AI698213 pooled .a 4120 to 4671 556 to 1       556/556
(100 %)
15 diff
(97.4 %id)
BF513466   .a 4140 to 4671 549 to 18   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 532/532
(100 %)
1 diff
(99.9 %id)
AA758518   .a 4142 to 4615 478 to 6       473/479
(98 %)
0 diff
(100 %id)
AA748292 germinal center B cell .a 4151 to 4601 451 to 1       451/455
(99 %)
16 diff
(96.5 %id)
EL955537 eyeball .a 4155 to 4631 1 to 477       477/477
(100 %)
7 diff
(98.6 %id)
BI000073 head_normal .a 4174 to 4326 159 to 5       155/163
(95 %)
0 diff
(100 %id)
DA397396 thalamus .a 4177 to 4762 2 to 590   capped   589/589
(100 %)
4 diff
(99.4 %id)
BE007200 breast_normal .a 4185 to 4609 430 to 6     Submitted on the opposite strand 425/430
(98 %)
0 diff
(100 %id)
AI190402 heart .a 4195 to 4674 479 to 1       479/479
(100 %)
3 diff
(99.4 %id)
CB160048 Liver .a 4205 to 4723 1 to 521       521/521
(100 %)
2 diff
(99.7 %id)
BG979343 colon_normal .a 4207 to 4502 308 to 16       293/308
(95 %)
0 diff
(100 %id)
N40001 placenta .a 4221 to 4712 1 to 493       493/494
(99 %)
3 diff
(99.4 %id)
N40009 placenta .a 4221 to 4712 1 to 494       494/496
(99 %)
5 diff
(99.0 %id)
AI274985 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4249 to 4671 423 to 1       423/423
(100 %)
0 diff
(100 %id)
N47825 placenta .a 4257 to 4671 1 to 417       417/420
(99 %)
8 diff
(98.1 %id)
AI808875 pooled .a 4260 to 4679 420 to 1       420/420
(100 %)
4 diff
(99.1 %id)
AA761731 germinal center B cell .a 4261 to 4619 359 to 1       359/359
(100 %)
1 diff
(99.8 %id)
H64325 liver and spleen .a 4268 to 4662 395 to 1       395/397
(99 %)
4 diff
(99.0 %id)
DA106781 cerebellum .a 4304 to 4855 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
AI283567 pooled .a 4334 to 4671 338 to 1       338/338
(100 %)
1 diff
(99.8 %id)
AA033671 uterus .a 4341 to 4683 1 to 341       341/344
(99 %)
6 diff
(98.3 %id)
BF767117 colon_normal .a 4361 to 4595 247 to 9     Submitted on the opposite strand 239/247
(96 %)
0 diff
(100 %id)
AA665797 bone marrow stroma .a 4376 to 4688 330 to 16       315/330
(95 %)
0 diff
(100 %id)
AA449683.
matches multiple genes
  .a 4387 to 4671 285 to 1     also hits gene CAMK2D 285/285
(100 %)
1 diff
(99.7 %id)
DA121041 cerebellum .a 4403 to 4934 2 to 536   capped   535/535
(100 %)
3 diff
(99.5 %id)
H84378 melanocyte .a 4403 to 4674 1 to 271       271/271
(100 %)
2 diff
(99.3 %id)
N25110 melanocyte .a 4412 to 4850 1 to 449       449/532
(84 %)
11 diff
(98.0 %id)
DA404026 thalamus .a 4420 to 4888 2 to 473   capped   472/472
(100 %)
5 diff
(99.0 %id)
AA809729 germinal center B cell .a 4423 to 4681 259 to 1       259/259
(100 %)
0 diff
(100 %id)
DA520045 brain .a 4428 to 4903 2 to 479   capped   478/478
(100 %)
3 diff
(99.4 %id)
BM841149 lymph node, stomach .a 4448 to 4896 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
CN403148 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4477 to 4766 1 to 292       292/292
(100 %)
3 diff
(99.0 %id)
CN403151 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4477 to 5111 1 to 638       638/638
(100 %)
4 diff
(99.4 %id)
DA325955 hippocampus .a 4503 to 5072 2 to 573   capped   572/572
(100 %)
4 diff
(99.4 %id)
EB360693 eye, lens .a 4584 to 5252 669 to 1   tiling clone,   669/669
(100 %)
4 diff
(99.5 %id)
N44323   .a 4586 to 4887 1 to 304       304/304
(100 %)
3 diff
(99.1 %id)
BM273239 Islets of Langerhans, Pancreas .a 4596 to 5097 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
BM692091 eye, human retina .a 4598 to 4970 1 to 375   fully sequenced,   375/375
(100 %)
7 diff
(98.2 %id)
W79350 heart .a 4603 to 5043 1 to 443   fully sequenced,   443/443
(100 %)
2 diff
(99.6 %id)
DA802197 brain .a 4658 to 5201 2 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
EH336640   .a 4664 to 4744 1 to 81       81/81
(100 %)
4 diff
(95.1 %id)
TI_157599958   .a 4668 to 5407 853 to 106   AAA   748/794
(94 %)
0 diff
(100 %id)
TI_149282894   .a 4670 to 5407 775 to 47   AAA   729/769
(94 %)
57 diff
(92.6 %id)
R42165 whole brain .a 4672 to 5037 373 to 1       373/424
(87 %)
14 diff
(96.7 %id)
TI_149288581   .a 4706 to 5407 792 to 92   AAA   701/704
(99 %)
0 diff
(100 %id)
TI_158432782   .a 4721 to 5408 784 to 99   AAA   686/915
(74 %)
23 diff
(97.5 %id)
BM970418 lung .a 4755 to 5407 669 to 16   AAA   654/654
(100 %)
0 diff
(100 %id)
BU621076 cell lines, Chondrosarcoma .a 4768 to 5407 659 to 19   AAA   641/641
(100 %)
1 diff
(99.9 %id)
CF136252 lymph .a 4800 to 5405 8 to 614       607/614
(98 %)
0 diff
(100 %id)
TI_154165243   .a 4800 to 5582 80 to 853       774/776
(99 %)
34 diff
(95.7 %id)
BF897441 marrow .a 4826 to 5228 414 to 12     Submitted on the opposite strand 403/414
(97 %)
0 diff
(100 %id)
CF529213 placenta .a 4836 to 5407 587 to 16   AAA   572/572
(100 %)
3 diff
(99.5 %id)
AA700167 liver and spleen .a 4916 to 5404 489 to 1       489/489
(100 %)
1 diff
(99.8 %id)
CF528610 placenta .a 4920 to 5408 506 to 18   AAA   489/489
(100 %)
5 diff
(99.0 %id)
BF002792 Prostate .a 4927 to 5410 484 to 1       484/488
(99 %)
0 diff
(100 %id)
N27275 placenta .a 4939 to 5411 479 to 4       476/483
(98 %)
0 diff
(100 %id)
AA814581 brain, substantia nigra .a 4939 to 5408 470 to 1       470/470
(100 %)
0 diff
(100 %id)
BU728840 eye, human retina .a 4940 to 5407 483 to 16   fully sequenced, AAA   468/468
(100 %)
0 diff
(100 %id)
BF941557 Prostate .a 4943 to 5407 475 to 11   AAA   465/465
(100 %)
2 diff
(99.6 %id)
AW236792 pooled germ cell tumors .a 4945 to 5407 474 to 12   AAA   463/463
(100 %)
3 diff
(99.4 %id)
AW629378 pooled .a 4947 to 5411 465 to 2       464/465
(99 %)
0 diff
(100 %id)
BF222581 Prostate .a 4951 to 5408 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AA809669 germinal center B cell .a 4955 to 5411 459 to 3       457/459
(99 %)
0 diff
(100 %id)
AA765953 germinal center B cell .a 4955 to 5407 474 to 22   AAA   453/453
(100 %)
1 diff
(99.8 %id)
BE164582 head_neck .a 4959 to 5632 15 to 687       673/687
(97 %)
0 diff
(100 %id)
DB527718 testis .a 4959 to 5405 1 to 447     Submitted on the opposite strand 447/449
(99 %)
1 diff
(99.8 %id)
AI129957 uterus .a 4967 to 5372 406 to 1       406/406
(100 %)
0 diff
(100 %id)
AW518629 2 pooled tumors (clear cell type), Kidney .a 4972 to 5406 437 to 3       435/437
(99 %)
0 diff
(100 %id)
BF448469 skin, normal, 4 pooled samples .a 4975 to 5405 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AI274194 adenocarcinoma, colon .a 4976 to 5372 400 to 6       395/400
(98 %)
0 diff
(100 %id)
AI080541 senescent fibroblast .a 4992 to 5407 427 to 12   AAA   416/416
(100 %)
0 diff
(100 %id)
AW769709 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .a 4997 to 5407 409 to 1       409/409
(100 %)
3 diff
(99.3 %id)
N27269 placenta .a 5004 to 5411 411 to 3       409/411
(99 %)
0 diff
(100 %id)
AI933523 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 5027 to 5372 346 to 1       346/346
(100 %)
5 diff
(98.6 %id)
BF223921 pooled germ cell tumors .a 5027 to 5407 392 to 12   AAA   381/381
(100 %)
2 diff
(99.5 %id)
W74256 heart .a 5029 to 5410 383 to 1   fully sequenced,   383/383
(100 %)
1 diff
(99.8 %id)
AA834355 adenocarcinoma, colon .a 5038 to 5384 347 to 1       347/347
(100 %)
0 diff
(100 %id)
DA525699 brain .a 5042 to 5613 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
AI002781   .a 5059 to 5372 318 to 5       314/318
(98 %)
0 diff
(100 %id)
AA574131 colon .a 5070 to 5404 335 to 1       335/335
(100 %)
0 diff
(100 %id)
R42838 whole brain .a 5084 to 5407 335 to 11   AAA   381/409
(93 %)
11 diff
(97.4 %id)
AA713949 germinal center B cell .a 5111 to 5407 307 to 11   AAA   297/297
(100 %)
0 diff
(100 %id)
AW662903 pooled .a 5126 to 5411 287 to 2       286/287
(99 %)
0 diff
(100 %id)
AA032215 uterus .a 5127 to 5407 293 to 13   AAA   281/281
(100 %)
1 diff
(99.7 %id)
AW367414 head_neck .a 5159 to 5716 1 to 558       558/558
(100 %)
15 diff
(97.4 %id)
BX505026   .a 5177 to 5859 1 to 686       686/686
(100 %)
4 diff
(99.5 %id)
AW772366 Kidney .a 5185 to 5407 223 to 1       223/223
(100 %)
2 diff
(99.2 %id)
AA894699 Kidney .a 5191 to 5407 217 to 1       217/217
(100 %)
1 diff
(99.6 %id)
AI677712 pooled .a 5210 to 5404 195 to 1       195/195
(100 %)
2 diff
(99.0 %id)
AW340599 pooled .a 5212 to 5404 203 to 11   AAA   193/193
(100 %)
0 diff
(100 %id)
BX497564 Liver .a 5280 to 5916 1 to 636   tiling clone,   636/636
(100 %)
2 diff
(99.7 %id)
DB233371 trachea .a 5285 to 5874 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
FN051873 breast carcinoma .a 5301 to 5401 102 to 1     Submitted on the opposite strand 102/103
(99 %)
1 diff
(99.1 %id)
DA720445   .a 5323 to 5881 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
AA890658 parathyroid gland, parathyroid tumor .a 5433 to 5794 1 to 362     Submitted on the opposite strand 362/362
(100 %)
0 diff
(100 %id)
BE677887 pooled .a 5433 to 5883 1 to 451     Submitted on the opposite strand 451/451
(100 %)
1 diff
(99.8 %id)
DA429137 colon .a 5549 to 6124 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
BE143582 head_neck .a 5590 to 5951 1 to 358       358/358
(100 %)
7 diff
(98.1 %id)
DA503722 brain .a 5613 to 6156 8 to 551   capped   544/550
(98 %)
4 diff
(99.3 %id)
AW752789 colon .a 5648 to 6322 674 to 1       674/675
(99 %)
17 diff
(97.5 %id)
CN292035 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 5648 to 6373 1 to 725       725/725
(100 %)
2 diff
(99.8 %id)
DA532544 brain .a 5713 to 6286 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA579883   .a 5721 to 6291 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
CV571860 cornea, eye .a 5742 to 6328 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DA829010 placenta .a 5781 to 6610 2 to 839   tiling clone, capped   838/842
(99 %)
10 diff
(98.9 %id)
AW850394 colon .a 5831 to 6319 489 to 1       489/489
(100 %)
4 diff
(99.2 %id)
CF552981 Pooled muscle (cardiac and skeletal) .a 5904 to 6698 12 to 813       802/815
(98 %)
55 diff
(93.3 %id)
BE143815 head_neck .a 5907 to 6329 426 to 5     Submitted on the opposite strand 422/426
(99 %)
0 diff
(100 %id)
DA876034 Prostate .a 5973 to 6543 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA783123 brain .a 5977 to 6543 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BQ889487 dorsal root ganglia .a 6123 to 6726 1 to 613       613/915
(66 %)
17 diff
(98.2 %id)
AL711295 human skeletal muscle .a 6182 to 6826 1 to 647       647/647
(100 %)
1 diff
(99.9 %id)
DB118778 thymus .a 6203 to 6769 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
CD515866 White Matter .a 6287 to 7042 65 to 844   tiling clone,   780/996
(78 %)
21 diff
(97.9 %id)
DA966902 stomach .a 6297 to 6864 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA485836 brain .a 6300 to 6511 2 to 213   capped   212/214
(99 %)
1 diff
(99.6 %id)
DA081875 cerebellum .a 6302 to 6870 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DB317165 brain .a 6345 to 6845 503 to 1       503/503
(100 %)
2 diff
(99.7 %id)
DA149416 amygdala .a 6395 to 6977 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
DA653441   .a 6408 to 6936 2 to 533   capped   532/532
(100 %)
5 diff
(99.1 %id)
AW439900 endometrioid ovarian metastasis, ovary .a 6529 to 6886 34 to 391     Submitted on the opposite strand 358/391
(91 %)
0 diff
(100 %id)
CN430624 embryonic stem cells, DMSO-treated H9 cellline .a 6575 to 7329 9 to 763       755/763
(98 %)
0 diff
(100 %id)
BG032706 breast, mammary adenocarcinoma, cell line .a 6608 to 7304 1 to 694       694/957
(72 %)
18 diff
(98.2 %id)
AU253541 neuroblastoma .a 6621 to 7282 41 to 696       656/688
(95 %)
6 diff
(99.2 %id)
AL703219 human skeletal muscle .a 6746 to 7416 1 to 671   tiling clone,   671/671
(100 %)
3 diff
(99.6 %id)
M85528   .a 6746 to 7147 1 to 401       401/401
(100 %)
3 diff
(99.3 %id)
DA563220 heart .a 6906 to 7473 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
CA393244 eye, RPE/choroid .a 6932 to 7418 9 to 495       487/495
(98 %)
2 diff
(99.6 %id)
DB486431 hypothalamus .a 6942 to 7297 1 to 364       364/398
(91 %)
23 diff
(94.3 %id)
CN430623 embryonic stem cells, cell lines H1, H7, andH9 .a 6949 to 7650 1 to 701       701/701
(100 %)
1 diff
(99.9 %id)
DA367568 subthalamic nucleus .a 7006 to 7563 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
CB985732 Pooled-Glandular .a 7115 to 7843 1 to 732   tiling clone,   732/740
(98 %)
7 diff
(99.1 %id)
CB985191 Pooled-Glandular .a 7115 to 7711 1 to 608       608/767
(79 %)
34 diff
(95.6 %id)
CB150222 Liver .a 7115 to 7659 1 to 545       545/545
(100 %)
2 diff
(99.7 %id)
BG741066 skin .a 7311 to 7361 709 to 761       708/804
(88 %)
25 diff
(96.9 %id)
DB317446 brain .a 8000 to 8543 544 to 1   tiling clone,   544/544
(100 %)
1 diff
(99.9 %id)
DB373664 placenta .a 8002 to 8551 544 to 1   tiling clone,   544/546
(99 %)
13 diff
(97.7 %id)
DB321750   .a 8018 to 8543 529 to 1       529/529
(100 %)
4 diff
(99.3 %id)
DB318986   .a 8023 to 8552 530 to 1   tiling clone,   530/530
(100 %)
2 diff
(99.7 %id)
AB209140 brain .b 1 to 3107 1 to 3107 exact tiling clone,   3107/3107
(100 %)
0 diff
(100 %id)
AU129044   .b 1802 to 2533 2 to 730   capped   729/729
(100 %)
7 diff
(99.1 %id)
BG341606 B-cells, primary B-cells from tonsils (cell line) .b 2129 to 2777 1 to 649       649/649
(100 %)
2 diff
(99.7 %id)
BF954982 nervous_normal .b 2266 to 2618 380 to 28       353/380
(92 %)
0 diff
(100 %id)
BF894617 marrow .b 2334 to 2711 387 to 6     Submitted on the opposite strand 382/387
(98 %)
1 diff
(99.8 %id)
DB366271   .b 3478 to 4062 587 to 1   tiling clone,   587/589
(99 %)
9 diff
(98.5 %id)
AA102008 colon, tumor .c 1 to 405 1 to 404   tiling clone,   404/404
(100 %)
4 diff
(99.1 %id)
AA099615 colon, tumor .c 1388 to 1783 414 to 1   tiling clone,   414/449
(92 %)
9 diff
(98.0 %id)
AK301960 testis .d 1 to 1469 1 to 1469 exact tiling clone,   1469/1469
(100 %)
0 diff
(100 %id)
DC396444 testis .d 1 to 579 1 to 579       579/579
(100 %)
0 diff
(100 %id)
AL833457 human fetal kidney .e 1 to 4358 1 to 4358 A304V tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 4358/4358
(100 %)
10 diff
(99.8 %id)
BX470774   .e 1 to 693 1 to 692     Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 692/692
(100 %)
1 diff
(99.9 %id)
BG535767 lung .e 531 to 971 1 to 441       441/441
(100 %)
0 diff
(100 %id)
N39792.
matches multiple genes
placenta .e 583 to 939 1 to 361     also hits gene C16orf80 361/364
(99 %)
9 diff
(97.6 %id)
CR748121   .e 584 to 1324 1 to 741       741/741
(100 %)
0 diff
(100 %id)
H87012 placenta .e 585 to 955 1 to 374       374/412
(90 %)
6 diff
(98.6 %id)
TI_149306794   .e 1315 to 2122 879 to 79   AAA   801/914
(87 %)
12 diff
(98.7 %id)
BM978765 lung, Primary Lung Epithelial Cells .e 1436 to 2122 704 to 19   tiling clone, AAA   686/686
(100 %)
5 diff
(99.3 %id)
N26906.
matches multiple genes
placenta .e 1675 to 2125 455 to 1     also hits gene C16orf80 455/455
(100 %)
6 diff
(98.7 %id)
BP419222 small intestine .e 1760 to 2127 1 to 368   tiling clone, Submitted on the opposite strand 368/368
(100 %)
1 diff
(99.8 %id)
H87013 placenta .e 1797 to 2107 314 to 1       314/317
(99 %)
5 diff
(98.5 %id)
BX470775   .e 3738 to 4358 639 to 19   AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 621/621
(100 %)
2 diff
(99.7 %id)
DN911976   .e 3870 to 4457 1 to 588       588/588
(100 %)
3 diff
(99.5 %id)
DB078164 testis .f 1 to 578 2 to 580   tiling clone, capped   579/579
(100 %)
4 diff
(99.4 %id)
DB047994 testis .f 4 to 555 2 to 555   capped   554/555
(99 %)
3 diff
(99.5 %id)
DB022103 testis .f 25 to 556 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DB462283 testis .f 41 to 510 1 to 470       470/471
(99 %)
2 diff
(99.6 %id)
DB084366 testis .f 46 to 589 2 to 545   tiling clone, capped   544/547
(99 %)
1 diff
(99.9 %id)
BU561517 testis .f 98 to 697 1 to 614 E54Q E110K K121N S129P N131K ... tiling clone,   614/805
(76 %)
29 diff
(96.4 %id)
DB086987 testis .f 102 to 674 2 to 576   tiling clone, capped   575/575
(100 %)
2 diff
(99.7 %id)
DA421658 cervix .g 1 to 522 2 to 523 exact tiling clone, capped   522/522
(100 %)
2 diff
(99.7 %id)
DA233251 brain .h-u 1 to 569 2 to 570 I57M tiling clone, to resequence, capped   569/569
(100 %)
1 diff
(99.9 %id)
BU934188 mixed (pool of 40 RNAs) .h-u 1226 to 1898 1 to 680   tiling clone,   680/857
(79 %)
20 diff
(97.7 %id)
DA835401 placenta .h-u 1275 to 1835 2 to 562   tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
FN151612 breast carcinoma .h-u 1328 to 1389 1 to 62       62/62
(100 %)
3 diff
(95.2 %id)
FN122880 breast carcinoma .h-u 1408 to 1534 126 to 1     Submitted on the opposite strand 126/126
(100 %)
1 diff
(99.3 %id)
BE091039 breast .h-u 1455 to 1832 11 to 397       387/400
(96 %)
33 diff
(91.8 %id)
FN129608 breast carcinoma .h-u 1537 to 1640 110 to 4     Submitted on the opposite strand 107/110
(97 %)
0 diff
(100 %id)
FN167291 breast carcinoma .h-u 1549 to 1665 119 to 1     Submitted on the opposite strand 119/119
(100 %)
3 diff
(97.5 %id)
CK024183 brain/CNS, Human Brain - Frontal Cortex .h-u 1604 to 2328 1 to 713       713/714
(99 %)
20 diff
(97.2 %id)
CV574194 cornea, eye .h-u 1631 to 2226 1 to 596   tiling clone,   596/596
(100 %)
2 diff
(99.7 %id)
R92772 liver and spleen .h-u 1768 to 2047 286 to 1       286/286
(100 %)
12 diff
(95.9 %id)
TI_154092301   .h-u 1806 to 2556 849 to 98   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 752/906
(83 %)
8 diff
(99.2 %id)
FN048390 breast carcinoma .h-u 1822 to 1913 1 to 92       92/93
(98 %)
7 diff
(92.5 %id)
BQ018605 lung, Metastatic Chondrosarcoma .h-u 1836 to 2556 739 to 19   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 721/721
(100 %)
2 diff
(99.8 %id)
BQ776282 Bone, Human Chondrosarcoma Cell Line .h-u 1878 to 2556 697 to 19   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 679/679
(100 %)
2 diff
(99.8 %id)
FN113684 breast carcinoma .h-u 1881 to 1947 1 to 68       68/69
(98 %)
2 diff
(97.2 %id)
AI734922 aorta .h-u 1907 to 2563 657 to 1       657/657
(100 %)
4 diff
(99.4 %id)
AV702692 adrenal gland .h-u 1914 to 2567 1 to 652   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 652/652
(100 %)
6 diff
(99.1 %id)
BQ003699 Chondrosarcoma, Left Pelvis .h-u 1930 to 2557 644 to 18       627/644
(97 %)
0 diff
(100 %id)
CA434541 lung, Metastatic Chondrosarcoma .h-u 1930 to 2556 645 to 19   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 627/627
(100 %)
1 diff
(99.9 %id)
BQ360065 head_normal .h-u 1966 to 2465 1 to 503       503/509
(98 %)
26 diff
(94.9 %id)
AW170432 cervix, tumor .h-u 2007 to 2564 559 to 2       558/559
(99 %)
0 diff
(100 %id)
AW262840 brain, three pooled meningiomas .h-u 2008 to 2558 552 to 1       552/552
(100 %)
2 diff
(99.7 %id)
DB328197 placenta .h-u 2021 to 2564 544 to 1   tiling clone,   544/544
(100 %)
0 diff
(100 %id)
N56581   .h-u 2025 to 2271 1 to 243       243/243
(100 %)
10 diff
(95.9 %id)
AI823797 2 pooled tumors (clear cell type), Kidney .h-u 2027 to 2564 549 to 12   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 538/538
(100 %)
1 diff
(99.9 %id)
DB305565 brain .h-u 2032 to 2556 525 to 1   to resequence,   525/525
(100 %)
1 diff
(99.9 %id)
AI911633 adenocarcinoma, Pancreas .h-u 2041 to 2557 521 to 5       517/521
(99 %)
0 diff
(100 %id)
FN060671 breast carcinoma .h-u 2045 to 2129 85 to 1     Submitted on the opposite strand 85/85
(100 %)
0 diff
(100 %id)
D53962   .h-u 2058 to 2385 1 to 326   fully sequenced,   326/326
(100 %)
4 diff
(98.8 %id)
FN086766 breast carcinoma .h-u 2085 to 2134 1 to 51       51/52
(98 %)
2 diff
(96.2 %id)
AI809676 pooled .h-u 2087 to 2560 474 to 1       474/474
(100 %)
1 diff
(99.8 %id)
AI589523 anaplastic oligodendroglioma, brain .h-u 2088 to 2564 477 to 1       477/477
(100 %)
2 diff
(99.6 %id)
AI494527 anaplastic oligodendroglioma, brain .h-u 2095 to 2564 470 to 1       470/470
(100 %)
2 diff
(99.6 %id)
AI167614 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2100 to 2564 462 to 1       462/462
(100 %)
4 diff
(99.2 %id)
BQ028170 mixed .h-u 2110 to 2718 623 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 608/620
(98 %)
4 diff
(99.4 %id)
AI685028 pooled .h-u 2113 to 2564 452 to 1       452/452
(100 %)
2 diff
(99.6 %id)
AI273513 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2116 to 2563 448 to 1       448/448
(100 %)
2 diff
(99.6 %id)
DB555423 hypothalamus .h-u 2121 to 2556 9 to 446   AAA Submitted on the opposite strand 438/446
(98 %)
0 diff
(100 %id)
AI401352 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2122 to 2564 444 to 1       444/444
(100 %)
9 diff
(98.0 %id)
AI336779 pooled .h-u 2126 to 2561 437 to 2       436/437
(99 %)
0 diff
(100 %id)
AI802197 carcinoid, lung .h-u 2136 to 2556 443 to 23   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 421/421
(100 %)
6 diff
(98.6 %id)
AW627868 2 pooled high-grade transitional celltumors, genitourinary tract .h-u 2151 to 2560 410 to 1       410/410
(100 %)
1 diff
(99.8 %id)
FN088451 breast carcinoma .h-u 2160 to 2265 1 to 105       105/105
(100 %)
3 diff
(97.2 %id)
T23860   .h-u 2161 to 2557 399 to 3       397/399
(99 %)
0 diff
(100 %id)
AI918680 pooled germ cell tumors .h-u 2177 to 2556 380 to 1       380/380
(100 %)
0 diff
(100 %id)
AI364356 anaplastic oligodendroglioma, brain .h-u 2183 to 2561 382 to 4       379/382
(99 %)
0 diff
(100 %id)
BE673119 Prostate .h-u 2184 to 2564 384 to 4       381/384
(99 %)
0 diff
(100 %id)
BQ954969 sciatic nerve .h-u 2226 to 2560 1 to 335   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 335/335
(100 %)
0 diff
(100 %id)
BM314144 insulinoma, Pancreas .h-u 2233 to 2560 1 to 328   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 328/328
(100 %)
4 diff
(98.8 %id)
CK905209 insulinoma, Pancreas .h-u 2233 to 2560 1 to 328   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 328/328
(100 %)
4 diff
(98.8 %id)
AL134324 brain .h-u 2234 to 2634 1 to 401   tiling clone,   401/401
(100 %)
2 diff
(99.6 %id)
BM313864 insulinoma, Pancreas .h-u 2235 to 2553 319 to 1       319/320
(99 %)
2 diff
(99.4 %id)
AI274029 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2239 to 2560 333 to 12   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 322/322
(100 %)
1 diff
(99.7 %id)
AA583662 Kidney, kidney tumor .h-u 2245 to 2561 318 to 2       317/318
(99 %)
0 diff
(100 %id)
AW089622 brain, tumor, 5 pooled (see description) .h-u 2246 to 2564 321 to 3       319/321
(99 %)
0 diff
(100 %id)
BF593270 Kidney .h-u 2251 to 2560 310 to 1       310/310
(100 %)
0 diff
(100 %id)
AA984910 Spleen .h-u 2254 to 2564 324 to 14   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 311/311
(100 %)
0 diff
(100 %id)
AW135769   .h-u 2255 to 2558 324 to 21       304/324
(93 %)
0 diff
(100 %id)
CA503093 Human Lung Epithelial cells, lung .h-u 2256 to 2532 295 to 19   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 277/336
(82 %)
4 diff
(98.9 %id)
AA194852 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 2260 to 2557 304 to 5       300/304
(98 %)
0 diff
(100 %id)
AI620782 Prostate .h-u 2262 to 2564 303 to 1       303/303
(100 %)
0 diff
(100 %id)
AW197318 pooled germ cell tumors .h-u 2262 to 2551 313 to 24   AAA   290/299
(96 %)
0 diff
(100 %id)
FN085168 breast carcinoma .h-u 2264 to 2342 85 to 6     Submitted on the opposite strand 80/86
(93 %)
0 diff
(100 %id)
FN125361 breast carcinoma .h-u 2284 to 2397 1 to 114       114/114
(100 %)
2 diff
(98.3 %id)
FN104908 breast carcinoma .h-u 2292 to 2403 110 to 1     Submitted on the opposite strand 110/110
(100 %)
2 diff
(98.2 %id)
AI202343 Prostate .h-u 2320 to 2556 1 to 237   AAA Submitted on the opposite strand 237/237
(100 %)
0 diff
(100 %id)
D60674   .h-u 2355 to 2556 202 to 1   fully sequenced,   202/202
(100 %)
1 diff
(99.6 %id)
FN169567 breast carcinoma .h-u 2372 to 2463 90 to 1     Submitted on the opposite strand 90/96
(93 %)
2 diff
(98.0 %id)
FN062903 breast carcinoma .h-u 2374 to 2477 105 to 1     Submitted on the opposite strand 105/105
(100 %)
1 diff
(99.1 %id)
BQ321986 colon .h-u 2390 to 2552 11 to 169       159/169
(94 %)
0 diff
(100 %id)
AW188112 pooled .h-u 2465 to 2565 116 to 16   AAA Possibly primed on the genome, locally A rich (15/18 A in genome downstream of last aligned base) 101/103
(98 %)
1 diff
(99.1 %id)
CV380662 testis_normal .i-u 1 to 189 200 to 13 exact tiling clone, Submitted on the opposite strand 188/200
(94 %)
0 diff
(100 %id)
AL708068 human skeletal muscle .i-u 64 to 652 1 to 590   tiling clone,   590/590
(100 %)
6 diff
(99.0 %id)
DB115812 thymus .i-u 358 to 872 2 to 519   tiling clone, capped   518/520
(99 %)
8 diff
(98.5 %id)
AA578561 lung, lung tumor .i-u 526 to 843 1 to 318     Submitted on the opposite strand 318/318
(100 %)
1 diff
(99.7 %id)
DA179922 amygdala .i-u 1607 to 2171 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
BI861294 breast, mammary adenocarcinoma, cell line .i-u 1675 to 2249 1 to 575   tiling clone, AAA   575/575
(100 %)
0 diff
(100 %id)
TI_57193082   .i-u 1675 to 2249 50 to 624   AAA   575/575
(100 %)
0 diff
(100 %id)
TI_157606782   .i-u 1697 to 2249 663 to 110   AAA   554/556
(99 %)
28 diff
(95.0 %id)
DB343646 thymus .i-u 1703 to 2249 547 to 1       547/547
(100 %)
1 diff
(99.9 %id)
BF508203   .i-u 1711 to 2249 557 to 19   AAA   539/539
(100 %)
2 diff
(99.7 %id)
AI950471 pooled germ cell tumors .i-u 1745 to 2248 503 to 1       503/503
(100 %)
4 diff
(99.3 %id)
H93455 liver and spleen .j-u 1 to 414 1 to 430   tiling clone, to resequence,   430/438
(98 %)
16 diff
(96.4 %id)
R92371 liver and spleen .j-u 2 to 372 1 to 392       392/392
(100 %)
23 diff
(94.2 %id)
H91414 liver and spleen .j-u 4 to 322 1 to 333       333/392
(84 %)
18 diff
(95.5 %id)
H80187 liver and spleen .j-u 44 to 461 1 to 431 Q34A K35E R36K T37N A38C ...     431/433
(99 %)
18 diff
(95.9 %id)
CN287581 embryonic stem cells, cell lines H1, H7, andH9 .j-u 106 to 565 1 to 463 exact tiling clone,   463/463
(100 %)
0 diff
(100 %id)
T54759 fetal spleen, Spleen .j-u 183 to 464 1 to 289 Q34A K35E R36K T37N A38C ...     289/291
(99 %)
11 diff
(96.3 %id)
DN919937   .j-u 386 to 716 15 to 345   tiling clone,   331/345
(95 %)
0 diff
(100 %id)
AA292477 germinal center B cell .j-u 1065 to 1500 1 to 436   tiling clone,   436/436
(100 %)
0 diff
(100 %id)
AI741373 pooled .j-u 1163 to 1690 553 to 26   tiling clone, AAA   528/528
(100 %)
0 diff
(100 %id)
BQ021813 placenta .j-u 1183 to 1690 525 to 18   AAA   508/508
(100 %)
0 diff
(100 %id)
BF508819   .j-u 1531 to 2206 679 to 5   tiling clone,   675/679
(99 %)
0 diff
(100 %id)
AW976443   .j-u 1562 to 2192 631 to 1     Submitted on the opposite strand 631/631
(100 %)
30 diff
(95.3 %id)
FN053472 breast carcinoma .j-u 1586 to 1677 87 to 1     Submitted on the opposite strand 87/87
(100 %)
0 diff
(100 %id)
CN292462 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j-u 1634 to 2172 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
FN115035 breast carcinoma .j-u 1659 to 1758 103 to 1     Submitted on the opposite strand 103/103
(100 %)
3 diff
(97.1 %id)
AA292478 germinal center B cell .j-u 1773 to 2193 421 to 1       421/421
(100 %)
1 diff
(99.8 %id)
H93456 liver and spleen .j-u 1780 to 2195 421 to 1   tiling clone, to resequence,   421/421
(100 %)
7 diff
(98.4 %id)
R92372 liver and spleen .j-u 1793 to 2147 355 to 1       355/362
(98 %)
4 diff
(98.9 %id)
H78812 liver and spleen .j-u 1841 to 2193 359 to 1       359/363
(98 %)
13 diff
(96.5 %id)
H91313 liver and spleen .j-u 1929 to 2184 256 to 1       256/260
(98 %)
0 diff
(100 %id)
BG150802 nasopharynx, normal epithelium .k-u 1 to 368 1 to 368   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 368/368
(100 %)
6 diff
(98.4 %id)
AA736831 germinal center B cell .k-u 11 to 377 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AA743325 germinal center B cell .k-u 45 to 377 333 to 1       333/333
(100 %)
0 diff
(100 %id)
AA085626   .k-u 105 to 529 1 to 425   tiling clone,   425/425
(100 %)
2 diff
(99.6 %id)
AA923404 pooled .k-u 109 to 368 260 to 1       260/260
(100 %)
0 diff
(100 %id)
AI608654 brain, tumor, 5 pooled (see description) .k-u 116 to 368 253 to 1       253/253
(100 %)
0 diff
(100 %id)
BM722489 eye, fetal eye .k-u 159 to 726 1 to 568     Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 568/568
(100 %)
2 diff
(99.7 %id)
BP422661 small intestine .k-u 216 to 722 1 to 508     Submitted on the opposite strand 508/508
(100 %)
3 diff
(99.5 %id)
FN073674 breast carcinoma .k-u 279 to 337 1 to 59       59/60
(98 %)
1 diff
(98.4 %id)
AV709447 adrenal gland .k-u 362 to 722 1 to 361       361/361
(100 %)
0 diff
(100 %id)
DR033553 brain, Right frontal lobe .k-u 376 to 904 35 to 563       529/563
(93 %)
0 diff
(100 %id)
AI879166 brain, frontal lobe .k-u 376 to 936 30 to 590   tiling clone,   561/590
(95 %)
2 diff
(99.7 %id)
AA714843 germinal center B cell .k-u 834 to 1080 1 to 246   tiling clone, Submitted on the opposite strand 246/246
(100 %)
3 diff
(98.8 %id)
DB094702 testis .k-u 940 to 1487 2 to 548 exact capped   547/547
(100 %)
1 diff
(99.9 %id)
BM679008 eye, fetal eye .k-u 1022 to 1593 589 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 571/571
(100 %)
4 diff
(99.3 %id)
AW241962 pooled .k-u 1035 to 1593 558 to 1 exact     558/558
(100 %)
1 diff
(99.9 %id)
CR742688 germinal center B cell .k-u 1080 to 1811 1 to 739 S4A L8S L9T C10L M12H ... tiling clone,   739/739
(100 %)
18 diff
(97.6 %id)
AW665681 pooled .k-u 1121 to 1583 473 to 11 I2T     463/473
(97 %)
0 diff
(100 %id)
AW974413   .k-u 1124 to 1592 468 to 1 exact   Submitted on the opposite strand 468/484
(96 %)
14 diff
(97.2 %id)
DB063196 testis .k-u 1148 to 1707 2 to 564 exact capped   563/563
(100 %)
1 diff
(99.9 %id)
DA395562 thalamus .k-u 1162 to 1742 2 to 586 L29F I31N K32Q P33T S34K ... capped   585/585
(100 %)
2 diff
(99.7 %id)
AA085600   .k-u 1250 to 1593 344 to 1       344/344
(100 %)
1 diff
(99.8 %id)
AA648821 germinal center B cell .k-u 1250 to 1602 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AI937873 brain, frontal lobe .k-u 1250 to 1600 351 to 1       351/351
(100 %)
0 diff
(100 %id)
AW518258 lymph node, lymphoma, follicular mixed small and largecell .k-u 1250 to 1593 344 to 1       344/344
(100 %)
2 diff
(99.5 %id)
BE328586 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .k-u 1250 to 1594 345 to 1       345/345
(100 %)
0 diff
(100 %id)
AA618255 thyroid .k-u 1251 to 1389 1 to 139       139/139
(100 %)
0 diff
(100 %id)
AA743475 germinal center B cell .k-u 1297 to 1606 310 to 1       310/310
(100 %)
1 diff
(99.7 %id)
DA280384 corpus callosum .k-u 1473 to 2010 2 to 541   capped   540/540
(100 %)
3 diff
(99.5 %id)
BF514793   .k-u 1573 to 2052 500 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 483/483
(100 %)
3 diff
(99.4 %id)
AA648923 germinal center B cell .k-u 1620 to 2047 428 to 1   tiling clone,   428/428
(100 %)
2 diff
(99.6 %id)
CB045305 colon, juvenile granulosa tumor .l-u 1 to 611 36 to 646 exact tiling clone,   611/646
(94 %)
0 diff
(100 %id)
BF738135 bladder_tumor .l-u 213 to 495 290 to 7     Submitted on the opposite strand 284/292
(97 %)
0 diff
(100 %id)
AW853684 colon .l-u 565 to 899 338 to 4   tiling clone,   335/338
(99 %)
0 diff
(100 %id)
AI635551 pooled germ cell tumors .l-u 710 to 1285 576 to 1   tiling clone,   576/576
(100 %)
0 diff
(100 %id)
BF057256 pooled germ cell tumors .l-u 783 to 1284 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AI962455 pooled germ cell tumors .l-u 789 to 1290 519 to 18   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 502/519
(96 %)
0 diff
(100 %id)
AF062357 brain, breast adenocarcinoma .l-u 817 to 982 1 to 166       166/166
(100 %)
5 diff
(97.0 %id)
TI_149280469   .l-u 883 to 1568 807 to 123   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 685/808
(84 %)
0 diff
(100 %id)
BU198275   .l-u 898 to 1424 3 to 554       552/554
(99 %)
0 diff
(100 %id)
N66706 cochlea, ear .l-u 912 to 1329 430 to 8   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 423/433
(97 %)
0 diff
(100 %id)
BG570733 placenta .l-u 1103 to 1902 1 to 793   tiling clone,   793/793
(100 %)
11 diff
(98.7 %id)
CB410351 maxilla, pooled .l-u 1107 to 1565 1 to 459   AAA   459/459
(100 %)
2 diff
(99.6 %id)
CB410116 maxilla, pooled .l-u 1107 to 1562 1 to 456     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 456/456
(100 %)
3 diff
(99.4 %id)
CB410314 maxilla, pooled .l-u 1107 to 1565 1 to 459   AAA   459/459
(100 %)
2 diff
(99.6 %id)
CB409492 maxilla, pooled .l-u 1107 to 1565 1 to 459   AAA   459/459
(100 %)
2 diff
(99.6 %id)
N28325 melanocyte .m-u 1 to 350 1 to 359   tiling clone,   359/368
(97 %)
12 diff
(96.8 %id)
AA310520   .m-u 26 to 469 1 to 443       443/443
(100 %)
1 diff
(99.8 %id)
AW958269   .m-u 27 to 714 1 to 689 G35R R42K F49S tiling clone,   689/692
(99 %)
9 diff
(98.7 %id)
BF510773   .m-u 84 to 741 674 to 18 exact tiling clone, AAA   657/657
(100 %)
1 diff
(99.9 %id)
H99508 melanocyte .m-u 413 to 741 340 to 12 S15X E44X AAA   329/329
(100 %)
0 diff
(100 %id)
BF029132 bladder, carcinoma, cell line .n-u 1 to 623 1 to 624 L16C L17S C18V E19K E20N ... tiling clone,   624/874
(71 %)
19 diff
(97.9 %id)
BE838717 prostate_normal .o-u 1 to 331 7 to 336 I2T F5N P12R I13M E14D ... tiling clone,   330/336
(98 %)
0 diff
(100 %id)
FN149236 breast carcinoma .o-u 7 to 112 108 to 4   tiling clone, Submitted on the opposite strand 105/108
(97 %)
0 diff
(100 %id)
CV370122 nervous_normal .o-u 58 to 521 469 to 1     Submitted on the opposite strand 469/474
(98 %)
12 diff
(97.5 %id)
BY798289 eye .o-u 106 to 568 13 to 475   tiling clone,   463/475
(97 %)
0 diff
(100 %id)
BE837473 prostate_normal .p-u 1 to 382 380 to 1 G4V E5V L56V tiling clone,   380/380
(100 %)
7 diff
(98.2 %id)
AL603102 human skeletal muscle Gene SOS1, variant not shown              
BU618616 Cell Line, Chondrosarcoma Gene SOS1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DC344232 thalamus Gene SOS1, variant not shown         Suspected internal deletion, this clone was ignored    
FN145825 breast carcinoma Gene SOS1, variant not shown              
BX483267   Gene SOS1, variant not shown         Suspected internal deletion, this clone was ignored    
DN919938   Gene SOS1, variant not shown         This clone was ignored    
BF769867 epid_tumor Gene SOS1, variant not shown         This clone was ignored    
BX116768 liver and spleen Gene SOS1, variant not shown              
BX096635 heart Gene SOS1, variant not shown       AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base)    
AK290228 thalamus Gene SOS1, variant not shown         Suspected internal deletion, this clone was ignored    
DC310833 cerebellum Gene SOS1, variant not shown         Suspected internal deletion, this clone was ignored    
H22713 whole brain Gene SOS1, variant not shown              
H23993 whole brain Gene SOS1, variant not shown       AAA      
N32963 melanocyte Gene SOS1, variant not shown              
N42637 melanocyte Gene SOS1, variant not shown              
N72891 melanocyte Gene SOS1, variant not shown              
W03047 melanocyte Gene SOS1, variant not shown              
W67167 heart Gene SOS1, variant not shown       fully sequenced,      
W67168 heart Gene SOS1, variant not shown       fully sequenced,      
AA284396 germinal center B cell Gene SOS1, variant not shown         This clone was ignored    
AA287008 germinal center B cell Gene SOS1, variant not shown         This clone was ignored    
AA947423 pooled Gene SOS1, variant not shown              
AA974159 pooled germ cell tumors Gene SOS1, variant not shown              
AW118775 pooled Gene SOS1, variant not shown         Submitted on the opposite strand    
AW340717 pooled Gene SOS1, variant not shown         Submitted on the opposite strand    
AW340678 pooled Gene SOS1, variant not shown         Submitted on the opposite strand    
BF002782 Prostate Gene SOS1, variant not shown         Suspected internal deletion, this clone was ignored    
DB221842 trachea Gene SOS1, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j-u, .k-u, .l-u, .m-u, .n-u, .o-u, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI