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Gene SOCS5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
221 supporting clones for gene SOCS5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB484121 hippocampus SOCS5.a 1 to 507 1 to 508       508/509
(99 %)
20 diff
(96.1 %id)
CD109610 Human Placenta, placenta SOCS5.a 1 to 664 27 to 699   tiling clone,   673/803
(83 %)
46 diff
(94.3 %id)
AF073958 placenta SOCS5.a 32 to 4056 1 to 4025 exact tiling clone, AAA   4025/4025
(100 %)
4 diff
(100.0 %id)
NM_144949.2   SOCS5.a 32 to 4541 1 to 4510 exact RefSeq,   4510/4510
(100 %)
0 diff
(100 %id)
DB098736 testis SOCS5.a 33 to 594 2 to 564   capped   563/565
(99 %)
3 diff
(99.5 %id)
DR001514 fetal brain SOCS5.a 79 to 733 8 to 662       655/662
(98 %)
6 diff
(99.1 %id)
DB232568 trachea SOCS5.a 118 to 667 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA220160 brain SOCS5.a 126 to 687 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA553566   SOCS5.a 126 to 689 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA124507 cerebellum SOCS5.a 127 to 677 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA111522 cerebellum SOCS5.a 131 to 702 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA191830 amygdala SOCS5.a 131 to 700 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA723096   SOCS5.a 131 to 704 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA099241 cerebellum SOCS5.a 132 to 677 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA143855 amygdala SOCS5.a 150 to 723 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA652748   SOCS5.a 150 to 743 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA727186   SOCS5.a 150 to 712 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA756202   SOCS5.a 150 to 643 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA858377 placenta SOCS5.a 150 to 685 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DA957584 Spleen SOCS5.a 150 to 704 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA995466 synovial membrane tissue from rheumatioidarthritis SOCS5.a 150 to 719 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
DB064651 testis SOCS5.a 150 to 687 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BY996585   SOCS5.a 156 to 856 13 to 713       701/713
(98 %)
5 diff
(99.3 %id)
CB988862 Human Placenta, placenta SOCS5.a 160 to 748 23 to 624       602/1044
(57 %)
19 diff
(98.2 %id)
DN990004 brain, whole brain SOCS5.a 162 to 676 31 to 545       515/545
(94 %)
6 diff
(98.9 %id)
DA650529   SOCS5.a 202 to 764 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA233937 brain SOCS5.a 238 to 814 2 to 578   capped   577/578
(99 %)
1 diff
(99.9 %id)
DC354674 lung SOCS5.b 1 to 583 1 to 583   tiling clone,   583/583
(100 %)
3 diff
(99.5 %id)
DC401848 testis SOCS5.b 15 to 568 1 to 554   tiling clone,   554/554
(100 %)
0 diff
(100 %id)
DC306456 cerebellum SOCS5.b 40 to 584 1 to 546       546/552
(98 %)
3 diff
(99.5 %id)
DC332814 hippocampus SOCS5.b 40 to 577 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DC363576   SOCS5.b 40 to 597 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC423510 uterus SOCS5.b 40 to 593 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DA233873 brain SOCS5.b 41 to 290 2 to 251   capped   250/250
(100 %)
0 diff
(100 %id)
AK290194 thalamus SOCS5.b 46 to 2083 1 to 2038 exact     2038/2038
(100 %)
2 diff
(100.0 %id)
DC343066 thalamus SOCS5.b 46 to 602 1 to 557       557/557
(100 %)
0 diff
(100 %id)
DC347421 tongue, tumor tissue SOCS5.b 46 to 605 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC393035 breast, tumor tissue SOCS5.b 46 to 610 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
DC400857 testis SOCS5.b 51 to 590 9 to 548       540/540
(100 %)
0 diff
(100 %id)
AB014571 brain SOCS5.b 52 to 4474 1 to 4423 exact tiling clone, available from KIAA,   4423/4423
(100 %)
0 diff
(100 %id)
AL136896 testis SOCS5.b 60 to 4358 1 to 4299 exact available from DKFZ, AAA   4299/4299
(100 %)
0 diff
(100 %id)
NM_014011.4   SOCS5.b 60 to 4481 1 to 4422 exact RefSeq,   4422/4422
(100 %)
0 diff
(100 %id)
DA128774 cerebellum SOCS5.b 141 to 722 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB222143 trachea SOCS5.b 217 to 792 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
TI_1948137651   SOCS5.b 219 to 938 121 to 844   fully sequenced,   724/844
(85 %)
11 diff
(98.7 %id)
CV024571 mixed SOCS5.b 224 to 838 1 to 614       614/617
(99 %)
3 diff
(99.6 %id)
TI_1948136967   SOCS5.b 224 to 1071 128 to 960       833/1343
(62 %)
46 diff
(96.6 %id)
TI_1948136968   SOCS5.b 224 to 1239 128 to 1142       1015/1352
(75 %)
6 diff
(99.6 %id)
TI_1948137306   SOCS5.b 224 to 1073 124 to 979       856/1407
(60 %)
29 diff
(98.0 %id)
TI_1948137307   SOCS5.b 224 to 1239 124 to 1141       1018/1371
(74 %)
37 diff
(97.4 %id)
TI_1948138001   SOCS5.b 224 to 1000 126 to 907       782/1398
(55 %)
15 diff
(99.0 %id)
TI_1948138002   SOCS5.b 224 to 1220 124 to 1131       1008/1391
(72 %)
51 diff
(96.4 %id)
DA811157 brain SOCS5.b 252 to 761 2 to 512   capped   511/511
(100 %)
1 diff
(99.9 %id)
DB090473 testis SOCS5.b 300 to 869 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BF736295 bladder_tumor SOCS5.b 344 to 610 267 to 2     Submitted on the opposite strand 266/268
(99 %)
0 diff
(100 %id)
CN361663 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells SOCS5.b 434 to 960 1 to 525       525/525
(100 %)
2 diff
(99.7 %id)
DB227783 trachea SOCS5.b 501 to 1054 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DB094059 testis SOCS5.b 561 to 1098 2 to 541   capped   540/540
(100 %)
3 diff
(99.5 %id)
DA519621 brain SOCS5.b 624 to 1179 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA098999 cerebellum SOCS5.b 639 to 1193 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA241852 brain SOCS5.b 639 to 1233 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA225913 brain SOCS5.b 645 to 1135 2 to 493   capped   492/492
(100 %)
2 diff
(99.6 %id)
DA387906 thalamus SOCS5.b 647 to 1240 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
CU444298 epidermis SOCS5.b 663 to 856 207 to 14     Submitted on the opposite strand 194/208
(93 %)
0 diff
(100 %id)
CU449936 epidermis SOCS5.b 663 to 856 207 to 14     Submitted on the opposite strand 194/208
(93 %)
0 diff
(100 %id)
CU450643 epidermis SOCS5.b 663 to 856 207 to 14     Submitted on the opposite strand 194/208
(93 %)
0 diff
(100 %id)
CU451968 epidermis SOCS5.b 663 to 856 207 to 14     Submitted on the opposite strand 194/208
(93 %)
0 diff
(100 %id)
BQ637654 eye, retina SOCS5.b 679 to 1237 20 to 578       559/578
(96 %)
6 diff
(99.0 %id)
CN361662 embryonic stem cells, cell lines H1, H7, andH9 SOCS5.b 680 to 1388 1 to 711       711/711
(100 %)
2 diff
(99.8 %id)
DB156859 thymus SOCS5.b 789 to 1367 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
BQ310908 breast_normal SOCS5.b 804 to 1250 1 to 447       447/447
(100 %)
29 diff
(93.6 %id)
TI_1948138003   SOCS5.b 809 to 1833 1152 to 126       1027/1160
(88 %)
0 diff
(100 %id)
DA309362 hippocampus SOCS5.b 818 to 1129 2 to 313   capped   312/312
(100 %)
1 diff
(99.7 %id)
TI_1948136969   SOCS5.b 890 to 1833 1075 to 128       948/1164
(81 %)
0 diff
(100 %id)
DA406261 thalamus SOCS5.b 904 to 1462 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
TI_1948137652   SOCS5.b 908 to 1839 1057 to 126   fully sequenced,   932/1057
(88 %)
40 diff
(96.3 %id)
R81092   SOCS5.b 919 to 1248 1 to 330       330/330
(100 %)
3 diff
(99.1 %id)
TI_1948138004   SOCS5.b 921 to 1833 1039 to 129       911/1357
(67 %)
0 diff
(100 %id)
DA231488 brain SOCS5.b 935 to 1469 2 to 536   capped   535/536
(99 %)
1 diff
(99.9 %id)
DA437943 tongue, tumor tissue SOCS5.b 944 to 1490 2 to 548   capped   547/548
(99 %)
1 diff
(99.9 %id)
TI_1948136970   SOCS5.b 972 to 1833 1005 to 143       863/1388
(62 %)
0 diff
(100 %id)
DB230967 trachea SOCS5.b 1051 to 1653 2 to 604   capped   603/603
(100 %)
0 diff
(100 %id)
DA119651 cerebellum SOCS5.b 1109 to 1670 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
CX164611 human embryonic stem cells differentiated toan early endodermal cell type SOCS5.b 1207 to 2040 1 to 834       834/834
(100 %)
4 diff
(99.6 %id)
AU280216   SOCS5.b 1251 to 1812 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
AA992978   SOCS5.b 1313 to 1619 328 to 23   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 306/328
(93 %)
0 diff
(100 %id)
DA404295 thalamus SOCS5.b 1321 to 1905 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
AV713570   SOCS5.b 1434 to 2051 1 to 619       619/619
(100 %)
8 diff
(98.8 %id)
BQ428144 leiomyosarcoma, uterus SOCS5.b 1587 to 2246 1 to 664       664/907
(73 %)
12 diff
(98.7 %id)
DA526459 brain SOCS5.b 1597 to 2158 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
AA324590 brain, cerebellum SOCS5.b 1600 to 1862 1 to 265       265/265
(100 %)
3 diff
(98.9 %id)
DA018064 adrenal gland SOCS5.b 1626 to 2207 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
AW962037   SOCS5.b 1629 to 2258 1 to 620       620/627
(98 %)
27 diff
(95.7 %id)
AA054102 eye, retina SOCS5.b 1659 to 2034 1 to 383       383/383
(100 %)
7 diff
(98.2 %id)
DA877941 Prostate SOCS5.b 1667 to 2241 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
AV723242 hypothalamus SOCS5.b 1737 to 2416 9 to 685       677/686
(98 %)
9 diff
(98.7 %id)
DB210471 trachea SOCS5.b 1761 to 2282 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
AA127708 uterus SOCS5.b 1789 to 2324 1 to 529       529/562
(94 %)
16 diff
(97.2 %id)
R81093   SOCS5.b 1864 to 2122 259 to 1       259/259
(100 %)
0 diff
(100 %id)
DA551233   SOCS5.b 1875 to 2395 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
BQ881514 dorsal root ganglia SOCS5.b 1880 to 2721 1 to 844       844/844
(100 %)
4 diff
(99.6 %id)
BG500070 adenocarcinoma, Prostate SOCS5.b 1889 to 2581 1 to 692       692/692
(100 %)
5 diff
(99.3 %id)
BQ880164 dorsal root ganglia SOCS5.b 1924 to 2844 1 to 924       924/925
(99 %)
25 diff
(97.3 %id)
DB207274 trachea SOCS5.b 1930 to 2562 2 to 640   capped   639/639
(100 %)
6 diff
(99.1 %id)
DA027343   SOCS5.b 1936 to 2514 2 to 582   capped   581/581
(100 %)
3 diff
(99.5 %id)
DA348441 substantia nigra SOCS5.b 1990 to 2558 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB253138 uterus SOCS5.b 2005 to 2581 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
AI752387 Bone, Hip SOCS5.b 2176 to 2866 6 to 697       692/697
(99 %)
6 diff
(99.2 %id)
DB266839 uterus SOCS5.b 2197 to 2774 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA572224 whole embryo, mainly body SOCS5.b 2199 to 3071 2 to 870   capped   869/871
(99 %)
16 diff
(98.2 %id)
BG533306 Liver SOCS5.b 2207 to 2881 1 to 673       673/1033
(65 %)
17 diff
(98.4 %id)
AA582216 Kidney, kidney tumor SOCS5.b 2239 to 2618 379 to 1       379/379
(100 %)
1 diff
(99.8 %id)
CD642525 Embryonic Stem cells SOCS5.b 2283 to 3082 48 to 831       784/836
(93 %)
20 diff
(97.7 %id)
BX119252 liver and spleen SOCS5.b 2322 to 2992 1 to 671       671/671
(100 %)
3 diff
(99.6 %id)
DA178977 amygdala SOCS5.b 2328 to 2879 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA570328 whole embryo, mainly head SOCS5.b 2328 to 3085 2 to 759   capped   758/758
(100 %)
3 diff
(99.7 %id)
N73023 liver and spleen SOCS5.b 2340 to 2777 1 to 445       445/448
(99 %)
10 diff
(97.8 %id)
BI063986 uterus_tumor SOCS5.b 2420 to 2546 127 to 1       127/127
(100 %)
2 diff
(98.5 %id)
C14289   SOCS5.b 2423 to 2859 1 to 443       443/444
(99 %)
9 diff
(98.0 %id)
D59493   SOCS5.b 2423 to 2578 1 to 156       156/160
(97 %)
2 diff
(98.8 %id)
DA129094 alzheimer cortex SOCS5.b 2446 to 3008 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
N48862 multiple sclerosis lesions SOCS5.b 2502 to 2685 1 to 184       184/184
(100 %)
1 diff
(99.5 %id)
DA140332 alzheimer cortex SOCS5.b 2521 to 3082 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BQ015062 Chondrosarcoma, Left Pubic Bone SOCS5.b 2535 to 3306 790 to 19   AAA   772/772
(100 %)
1 diff
(99.9 %id)
BI063985 uterus_tumor SOCS5.b 2562 to 3048 487 to 1       487/487
(100 %)
4 diff
(99.2 %id)
BE067401 breast SOCS5.b 2574 to 3230 14 to 664       651/691
(94 %)
11 diff
(98.5 %id)
AL046034 testis SOCS5.b 2574 to 3343 1 to 774       774/944
(81 %)
21 diff
(97.8 %id)
BE067405 breast SOCS5.b 2584 to 3259 681 to 6     Submitted on the opposite strand 676/681
(99 %)
0 diff
(100 %id)
N95560 multiple sclerosis lesions SOCS5.b 2588 to 3074 1 to 482       482/482
(100 %)
7 diff
(98.6 %id)
BE466324 Kidney SOCS5.b 2590 to 3179 590 to 1       590/590
(100 %)
1 diff
(99.9 %id)
AW749201 breast SOCS5.b 2618 to 3021 1 to 409       409/410
(99 %)
27 diff
(93.5 %id)
BE067397 breast SOCS5.b 2626 to 3259 638 to 6     Submitted on the opposite strand 633/646
(97 %)
0 diff
(100 %id)
BE067400 breast SOCS5.b 2677 to 3259 598 to 15     Submitted on the opposite strand 584/598
(97 %)
0 diff
(100 %id)
BI061429 uterus_tumor SOCS5.b 2697 to 2829 147 to 15       133/147
(90 %)
0 diff
(100 %id)
BI061634 uterus_tumor SOCS5.b 2697 to 2829 143 to 11       133/143
(93 %)
0 diff
(100 %id)
BP429961   SOCS5.b 2727 to 3128 1 to 402       402/402
(100 %)
1 diff
(99.8 %id)
AW577085 breast SOCS5.b 2799 to 3155 429 to 73       357/430
(83 %)
0 diff
(100 %id)
AI752388 Bone, Hip SOCS5.b 2808 to 3274 474 to 8       467/474
(98 %)
0 diff
(100 %id)
AW577086 breast SOCS5.b 2809 to 3220 416 to 1       416/416
(100 %)
21 diff
(95.0 %id)
AA738006 pooled germ cell tumors SOCS5.b 2840 to 3122 33 to 315     Submitted on the opposite strand 283/315
(89 %)
6 diff
(98.1 %id)
DB530750 hippocampus SOCS5.b 2863 to 3305 1 to 441     Submitted on the opposite strand 441/442
(99 %)
28 diff
(93.7 %id)
BQ024205 placenta SOCS5.b 2885 to 3298 432 to 19   AAA   414/414
(100 %)
3 diff
(99.3 %id)
AW664421 2 pooled high-grade transitional celltumors, genitourinary tract SOCS5.b 2900 to 3306 423 to 17   AAA   407/407
(100 %)
1 diff
(99.8 %id)
BG687122 lung, mucoepidermoid carcinoma SOCS5.b 2908 to 3704 1 to 801       801/835
(95 %)
25 diff
(97.1 %id)
BI061540 uterus_tumor SOCS5.b 2915 to 3355 441 to 1       441/441
(100 %)
1 diff
(99.8 %id)
T17373   SOCS5.b 2932 to 3296 370 to 6       365/370
(98 %)
0 diff
(100 %id)
AA411972.
matches multiple genes
  SOCS5.b 2937 to 3299 1 to 362     also hits gene feysweebu 362/362
(100 %)
3 diff
(99.2 %id)
D50980   SOCS5.b 2945 to 3306 359 to 1       359/359
(100 %)
3 diff
(99.2 %id)
BM955863 tonsil SOCS5.b 2954 to 3530 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BI821824 pooled brain, lung, testis SOCS5.b 2963 to 3306 80 to 424   AAA   345/424
(81 %)
5 diff
(98.9 %id)
TI_57198521   SOCS5.b 2963 to 3306 114 to 458   AAA   345/458
(75 %)
6 diff
(98.7 %id)
AW079554 colon, moderately differentiated adenocarcinoma SOCS5.b 2966 to 3307 344 to 2       343/344
(99 %)
0 diff
(100 %id)
AI700857 Kidney SOCS5.b 2970 to 3306 339 to 1       339/340
(99 %)
7 diff
(98.0 %id)
N55225 multiple sclerosis lesions SOCS5.b 2982 to 3265 30 to 314       285/314
(90 %)
7 diff
(97.8 %id)
R33896 placenta SOCS5.b 3012 to 3333 1 to 322       322/325
(99 %)
6 diff
(98.2 %id)
BG112550 Bone, osteosarcoma, cell line SOCS5.b 3038 to 3693 1 to 675       675/968
(69 %)
34 diff
(96.5 %id)
BM738566 stomach SOCS5.b 3050 to 3295 1 to 245       245/245
(100 %)
1 diff
(99.6 %id)
BF509476   SOCS5.b 3059 to 3306 265 to 18   AAA   248/255
(97 %)
1 diff
(99.7 %id)
BF666223 brain, primitive neuroectoderm SOCS5.b 3070 to 3770 1 to 697       697/746
(93 %)
32 diff
(95.8 %id)
AW611651 Kidney SOCS5.b 3071 to 3292 223 to 1       223/223
(100 %)
2 diff
(99.2 %id)
BP417162 small intestine SOCS5.b 3076 to 3515 1 to 441     Submitted on the opposite strand 441/441
(100 %)
3 diff
(99.4 %id)
AI826316 normal prostate, Prostate SOCS5.b 3095 to 3307 213 to 1       213/213
(100 %)
0 diff
(100 %id)
BF981284 duodenal adenocarcinoma, cell line, small intestine SOCS5.b 3102 to 3827 1 to 724       724/941
(76 %)
23 diff
(97.6 %id)
BU852882 testis SOCS5.b 3220 to 3999 1 to 790       790/791
(99 %)
13 diff
(98.4 %id)
BG029241 Bone, osteosarcoma, cell line SOCS5.b 3229 to 3953 1 to 718       718/957
(75 %)
22 diff
(97.8 %id)
N53658 liver and spleen SOCS5.b 3238 to 3722 489 to 1       489/490
(99 %)
7 diff
(98.6 %id)
EC552907 Prostate SOCS5.b 3252 to 3362 110 to 1       110/110
(100 %)
1 diff
(99.1 %id)
TI_154010761   SOCS5.b 3268 to 4002 877 to 132   AAA   746/1116
(66 %)
41 diff
(96.4 %id)
W19198 lung SOCS5.b 3275 to 3585 1 to 311       311/311
(100 %)
6 diff
(98.1 %id)
R80534 placenta SOCS5.b 3361 to 3771 1 to 418       418/419
(99 %)
22 diff
(94.8 %id)
AL039592 testis SOCS5.b 3377 to 3719 1 to 344       344/344
(100 %)
2 diff
(99.5 %id)
BU625772 cell lines, Enchondroma SOCS5.b 3386 to 4002 635 to 19   AAA   617/617
(100 %)
0 diff
(100 %id)
AI088496 uterus SOCS5.b 3409 to 3996 588 to 1       588/588
(100 %)
0 diff
(100 %id)
DB357087 whole embryo, mainly head SOCS5.b 3500 to 3996 487 to 1       487/492
(98 %)
19 diff
(96.2 %id)
N78406 multiple sclerosis lesions SOCS5.b 3506 to 3784 1 to 280       280/280
(100 %)
4 diff
(98.6 %id)
BM993963 lung, Metastatic Chondrosarcoma SOCS5.b 3506 to 4002 509 to 13   AAA   497/497
(100 %)
0 diff
(100 %id)
BQ026142 placenta SOCS5.b 3517 to 3996 495 to 16   AAA   480/480
(100 %)
4 diff
(99.2 %id)
TI_149290682   SOCS5.b 3546 to 4358 881 to 88   AAA   794/942
(84 %)
21 diff
(97.8 %id)
DB553085 hippocampus SOCS5.b 3548 to 4002 1 to 454     Submitted on the opposite strand 454/454
(100 %)
1 diff
(99.8 %id)
CA435702 lung, Metastatic Chondrosarcoma SOCS5.b 3562 to 4002 453 to 13   AAA   441/441
(100 %)
0 diff
(100 %id)
AA092245   SOCS5.b 3596 to 3766 169 to 1     Submitted on the opposite strand 169/169
(100 %)
8 diff
(95.3 %id)
C06421   SOCS5.b 3616 to 4001 394 to 3       392/398
(98 %)
0 diff
(100 %id)
AI493052 Kidney SOCS5.b 3619 to 3994 393 to 18   AAA   376/376
(100 %)
5 diff
(98.7 %id)
R33011 placenta SOCS5.b 3650 to 3996 356 to 1       356/427
(83 %)
11 diff
(97.5 %id)
AA971583 pooled SOCS5.b 3652 to 3996 345 to 1       345/345
(100 %)
0 diff
(100 %id)
CA407198 adipose SOCS5.b 3678 to 4276 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
AW362487 colon SOCS5.b 3698 to 3985 288 to 1       288/300
(96 %)
3 diff
(99.0 %id)
BI048289 stomach SOCS5.b 3712 to 3984 285 to 6       280/329
(85 %)
0 diff
(100 %id)
BM973647 lung SOCS5.b 3729 to 4358 648 to 19   AAA   630/630
(100 %)
0 diff
(100 %id)
CD523054 pooled SOCS5.b 3809 to 4371 1 to 562       562/772
(72 %)
14 diff
(98.2 %id)
AW196048 adenocarcinoma, Pancreas SOCS5.b 3818 to 4004 187 to 1       187/187
(100 %)
0 diff
(100 %id)
DB359215 whole embryo, mainly body SOCS5.b 3836 to 4358 526 to 1       526/526
(100 %)
7 diff
(98.7 %id)
N90775 lung SOCS5.b 3884 to 4362 479 to 1       479/585
(81 %)
3 diff
(99.5 %id)
AI566046 Kidney SOCS5.b 3890 to 4295 411 to 6       406/411
(98 %)
0 diff
(100 %id)
DB539141 hippocampus SOCS5.b 3908 to 4351 1 to 446     Submitted on the opposite strand 446/446
(100 %)
5 diff
(98.9 %id)
FN140169 breast carcinoma SOCS5.b 3918 to 3995 78 to 2     Submitted on the opposite strand 77/80
(96 %)
0 diff
(100 %id)
Z32899   SOCS5.b 3926 to 4315 1 to 393       393/400
(98 %)
4 diff
(99.0 %id)
AI890044 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus SOCS5.b 3929 to 4353 426 to 2       425/426
(99 %)
0 diff
(100 %id)
N58890 multiple sclerosis lesions SOCS5.b 3936 to 4359 427 to 3       425/429
(99 %)
0 diff
(100 %id)
DB510014 testis SOCS5.b 3940 to 4346 1 to 406     Submitted on the opposite strand 406/408
(99 %)
9 diff
(97.8 %id)
AW167967 serous papillary carcinoma, high grade, 2pooled tumors, uterus SOCS5.b 3958 to 4364 408 to 2       407/408
(99 %)
0 diff
(100 %id)
AL039593 testis SOCS5.b 3988 to 4359 401 to 29   AAA   373/373
(100 %)
1 diff
(99.8 %id)
AI433294 Kidney SOCS5.b 3989 to 4481 494 to 2       493/494
(99 %)
0 diff
(100 %id)
BE041706 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SOCS5.b 4006 to 4294 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
AI689600 serous papillary carcinoma, high grade, 2pooled tumors, uterus SOCS5.b 4014 to 4323 320 to 11       310/322
(96 %)
0 diff
(100 %id)
AA583249 germ cell tumor SOCS5.b 4033 to 4327 295 to 1       295/295
(100 %)
0 diff
(100 %id)
TI_158432366   SOCS5.b 4047 to 4535 603 to 115   AAA   489/499
(97 %)
26 diff
(94.8 %id)
D59492   SOCS5.b 4099 to 4358 261 to 1       261/262
(99 %)
3 diff
(98.9 %id)
D59519   SOCS5.b 4108 to 4358 251 to 1       251/251
(100 %)
0 diff
(100 %id)
AW262882 brain, three pooled meningiomas SOCS5.b 4111 to 4359 249 to 1       249/249
(100 %)
0 diff
(100 %id)
R80422 placenta SOCS5.b 4128 to 4328 203 to 3       201/203
(99 %)
0 diff
(100 %id)
AI587131 adenocarcinoma, Pancreas SOCS5.b 4141 to 4358 235 to 18   AAA   218/218
(100 %)
2 diff
(99.1 %id)
EC502742 Prostate SOCS5.b 4188 to 4294 1 to 107       107/107
(100 %)
0 diff
(100 %id)
AI478618 Kidney SOCS5.b 4191 to 4359 173 to 5       169/173
(97 %)
0 diff
(100 %id)
BQ002596 Chondrosarcoma, Left Pelvis SOCS5.b 4241 to 4817 589 to 15   AAA   575/575
(100 %)
20 diff
(96.6 %id)
AW361173 colon SOCS5.b 4364 to 4684 1 to 319   tiling clone,   319/319
(100 %)
6 diff
(98.2 %id)
AA523245 metastatic prostate bone lesion SOCS5.b 4382 to 4592 214 to 4   tiling clone,   211/220
(95 %)
0 diff
(100 %id)
BG034757 adenocarcinoma, cell line, Liver SOCS5.b 4570 to 4933 1 to 361   tiling clone, AAA   361/361
(100 %)
3 diff
(99.2 %id)
DA950063 Spleen SOCS5.b 4621 to 5159 2 to 542   tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
DA766617 tongue SOCS5.b 4755 to 5265 2 to 512   tiling clone, capped   511/511
(100 %)
0 diff
(100 %id)
AK296796 tongue, tumor tissue SOCS5.c 1 to 1844 1 to 1844 exact tiling clone,   1844/1844
(100 %)
2 diff
(99.9 %id)
DC346310 tongue, tumor tissue SOCS5.c 1 to 573 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC306344 cerebellum SOCS5.d 1 to 578 2 to 579 exact tiling clone,   579/579
(100 %)
0 diff
(100 %id)
DB325488 tongue SOCS5.e-u 1 to 569 571 to 1 exact tiling clone,   571/571
(100 %)
3 diff
(99.5 %id)
BP425624 small intestine SOCS5.e-u 93 to 356 1 to 264   tiling clone, Submitted on the opposite strand 264/264
(100 %)
2 diff
(99.3 %id)
DB318736 heart SOCS5.e-u 482 to 1026 548 to 1   tiling clone,   548/548
(100 %)
4 diff
(99.3 %id)
DA560879 heart SOCS5.f-u 1 to 572 2 to 574 exact tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
BC032862 Brain, hippocampus Gene SOCS5, variant not shown       available from MGC, AAA This clone was ignored    
AA984672 schizophrenic brain S-11 frontal lobe Gene SOCS5, variant not shown         Submitted on the opposite strand    
BI553037 brain, hippocampus Gene SOCS5, variant not shown         This clone was ignored    
TI_44170527   Gene SOCS5, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI