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Gene SNX4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
418 supporting clones for gene SNX4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK298972   .a 136 to 1293 151 to 1308 exact tiling clone,   1308/1308
(100 %)
0 diff
(100 %id)
DC330831 hippocampus .a 136 to 535 176 to 575       575/575
(100 %)
0 diff
(100 %id)
DC337214 substantia nigra .a 136 to 553 153 to 570       570/570
(100 %)
0 diff
(100 %id)
DC368175   .a 136 to 548 151 to 563       563/563
(100 %)
0 diff
(100 %id)
DA613156   .b -11 to 559 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
BE731659 choriocarcinoma, placenta .b -10 to 720 1 to 733       733/738
(99 %)
24 diff
(96.8 %id)
BI753292 brain .b -10 to 763 1 to 774       774/774
(100 %)
0 diff
(100 %id)
TI_57217922   .b -10 to 763 34 to 807       774/807
(95 %)
6 diff
(99.3 %id)
AK001835 placenta .b -9 to 2475 1 to 2485 exact tiling clone, available from FLJ,   2485/2485
(100 %)
0 diff
(100 %id)
BQ938587 leiomyosarcoma, uterus .b -9 to 911 1 to 926       926/929
(99 %)
14 diff
(98.5 %id)
DA255377 caudate nucleus .b -8 to 564 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA715291   .b -8 to 498 2 to 508   capped   507/507
(100 %)
4 diff
(99.3 %id)
DA820464 pericardium .b -8 to 542 2 to 552   capped   551/552
(99 %)
3 diff
(99.5 %id)
AU135048 placenta .b -8 to 478 2 to 493   capped   492/492
(100 %)
16 diff
(96.8 %id)
DA881551   .b -8 to 559 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB200332 trachea .b -8 to 579 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
T60550 Liver .b 1 to 362 9 to 368       368/368
(100 %)
7 diff
(98.1 %id)
BM808194 ovary (pool of 3) .b 1 to 541 78 to 619       549/1389
(39 %)
17 diff
(98.8 %id)
AF065485   .b 1 to 1494 7 to 1500 exact     1500/1500
(100 %)
4 diff
(99.8 %id)
DA179125 amygdala .b 1 to 572 8 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
CD617570   .b 1 to 143 7 to 149       149/163
(91 %)
0 diff
(100 %id)
CD617571   .b 1 to 143 162 to 8       149/162
(91 %)
0 diff
(100 %id)
CV029187 mixed .b 1 to 637 7 to 640       640/685
(93 %)
5 diff
(99.3 %id)
BE408294 choriocarcinoma, placenta .b 1 to 598 7 to 604       604/604
(100 %)
2 diff
(99.7 %id)
DA487011 brain .b 1 to 584 7 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BE272609 Kidney, renal cell adenocarcinoma .b 1 to 595 6 to 600       600/600
(100 %)
0 diff
(100 %id)
DA647799   .b 1 to 468 7 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DB176750 kidney, tumor tissue .b 1 to 546 7 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DB202596 trachea .b 1 to 578 7 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
AL537414 brain, fetal brain .b 1 to 745 5 to 753       753/753
(100 %)
9 diff
(98.9 %id)
BX423523 brain, fetal brain .b 1 to 1023 5 to 1017       1017/1029
(98 %)
13 diff
(98.8 %id)
BP276398 Kidney .b 1 to 491 4 to 496       496/567
(87 %)
16 diff
(97.2 %id)
DA364254 subthalamic nucleus .b 1 to 574 3 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
DA033572   .b 1 to 577 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CD617572   .b 6 to 143 1 to 138       138/152
(90 %)
0 diff
(100 %id)
CD617573   .b 6 to 143 151 to 14       138/151
(91 %)
0 diff
(100 %id)
CR746705 melanotic melanoma, skin .b 8 to 488 12 to 492       481/492
(97 %)
6 diff
(98.8 %id)
BQ440656 melanotic melanoma, skin .b 8 to 720 21 to 733       713/855
(83 %)
8 diff
(99.1 %id)
BM905832 leiomyosarcoma, uterus .b 18 to 980 12 to 982       971/989
(98 %)
24 diff
(97.6 %id)
BE250217 muscle, rhabdomyosarcoma .b 24 to 764 1 to 745       745/1191
(62 %)
9 diff
(99.3 %id)
CD617568   .b 44 to 143 1 to 100       100/113
(88 %)
0 diff
(100 %id)
CD617569   .b 44 to 143 112 to 13       100/112
(89 %)
0 diff
(100 %id)
AV751137 Pituitary .b 45 to 367 1 to 313       316/318
(99 %)
12 diff
(96.3 %id)
BQ212666 melanotic melanoma, skin .b 51 to 783 1 to 730       730/918
(79 %)
23 diff
(97.5 %id)
BP202196 amygdala .b 136 to 554 167 to 582       582/583
(99 %)
3 diff
(99.5 %id)
DA024090   .b 136 to 550 153 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA024751   .b 136 to 539 153 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BC018762 Skin, melanotic melanoma. .b 136 to 1401 160 to 1425 exact available from MGC, AAA   1425/1425
(100 %)
0 diff
(100 %id)
DA039051 bladder .b 136 to 534 153 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA042857 bladder .b 136 to 536 172 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA134882 alzheimer cortex .b 136 to 537 153 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA144982 amygdala .b 136 to 553 153 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA152477 amygdala .b 136 to 548 170 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA158087 amygdala .b 136 to 553 167 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA161548 amygdala .b 136 to 531 173 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA161687 amygdala .b 136 to 418 194 to 477   capped   455/455
(100 %)
2 diff
(99.6 %id)
DA162996 amygdala .b 136 to 567 151 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA166635 amygdala .b 136 to 468 174 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DC315206 amygdala .b 136 to 498 153 to 513       513/513
(100 %)
2 diff
(99.7 %id)
DA168947 amygdala .b 136 to 320 153 to 338   capped   337/337
(100 %)
1 diff
(99.8 %id)
DA173378 amygdala .b 136 to 550 154 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA173786 amygdala .b 136 to 521 171 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA181081 amygdala .b 136 to 547 153 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA263692 caudate nucleus .b 136 to 539 158 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA264725 caudate nucleus .b 136 to 528 172 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA269584 caudate nucleus .b 136 to 468 153 to 485   capped   484/484
(100 %)
1 diff
(99.8 %id)
DA271282 caudate nucleus .b 136 to 517 172 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA273876 corpus callosum .b 136 to 522 172 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA276282 corpus callosum .b 136 to 530 173 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA281006 corpus callosum .b 136 to 559 154 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA282320 corpus callosum .b 136 to 519 170 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA289089 hippocampus .b 136 to 528 170 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA289785 hippocampus .b 136 to 556 172 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA289870 hippocampus .b 136 to 530 186 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA290931 hippocampus .b 136 to 540 158 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA290938 hippocampus .b 136 to 468 160 to 493   capped   492/492
(100 %)
4 diff
(99.2 %id)
DA291512 hippocampus .b 136 to 431 287 to 582   capped   470/581
(80 %)
6 diff
(99.0 %id)
DA295595 hippocampus .b 136 to 529 170 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA297079 hippocampus .b 136 to 535 172 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA297240 hippocampus .b 136 to 521 174 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DA300191 hippocampus .b 136 to 558 158 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA304883 hippocampus .b 136 to 557 151 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA307420 hippocampus .b 136 to 565 170 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA309262 hippocampus .b 136 to 529 172 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA343527 substantia nigra .b 136 to 523 171 to 558   capped   557/559
(99 %)
1 diff
(99.9 %id)
DA363221 subthalamic nucleus .b 136 to 523 153 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA369989 subthalamic nucleus .b 136 to 457 171 to 492   capped   491/491
(100 %)
1 diff
(99.8 %id)
DA379651 thalamus .b 136 to 503 170 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA380875 thalamus .b 136 to 588 175 to 627   capped   626/626
(100 %)
3 diff
(99.6 %id)
DA386710 thalamus .b 136 to 525 178 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DA386748 thalamus .b 136 to 533 175 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA396333 thalamus .b 136 to 572 165 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA397225 thalamus .b 136 to 537 170 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CA405825 adipose .b 136 to 563 152 to 578       578/578
(100 %)
7 diff
(98.8 %id)
BP212861 cerebrum .b 136 to 545 172 to 581       581/581
(100 %)
0 diff
(100 %id)
CD617574   .b 136 to 143 157 to 164       164/178
(92 %)
0 diff
(100 %id)
CD687694 normal nasopharynx .b 136 to 430 201 to 495       456/495
(92 %)
9 diff
(98.2 %id)
AU279506   .b 136 to 514 153 to 531       531/531
(100 %)
1 diff
(99.9 %id)
CN340634 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 136 to 661 156 to 682       682/682
(100 %)
7 diff
(99.0 %id)
AL519697 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 136 to 898 164 to 925       925/925
(100 %)
6 diff
(99.4 %id)
BX462567 T cells (Jurkat cell line) .b 136 to 1038 164 to 1058       1058/1058
(100 %)
10 diff
(99.1 %id)
DA438684 tongue, tumor tissue .b 136 to 550 170 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA445238 tongue, tumor tissue .b 136 to 528 173 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA468171   .b 136 to 539 167 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DT215684 brain .b 136 to 467 152 to 479       479/479
(100 %)
10 diff
(98.0 %id)
DA485734 brain .b 136 to 562 154 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
DA487370 brain .b 136 to 548 171 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA488194 brain .b 136 to 534 172 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA490375 brain .b 136 to 557 153 to 574   capped   573/577
(99 %)
1 diff
(99.9 %id)
DA505579 brain .b 136 to 553 153 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA505865 brain .b 136 to 539 170 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB470362 hippocampus .b 136 to 409 168 to 441       441/441
(100 %)
3 diff
(99.4 %id)
DB470569 hippocampus .b 136 to 452 154 to 473       473/473
(100 %)
7 diff
(98.6 %id)
DB473763 hippocampus .b 136 to 441 153 to 458       458/458
(100 %)
0 diff
(100 %id)
DB475334 hippocampus .b 136 to 446 176 to 486       486/486
(100 %)
2 diff
(99.6 %id)
DB485797 hypothalamus .b 136 to 345 169 to 376       376/442
(85 %)
17 diff
(96.2 %id)
DA543516   .b 136 to 551 151 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA544743   .b 136 to 525 172 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA549373   .b 136 to 544 170 to 577   capped   576/581
(99 %)
1 diff
(99.9 %id)
DA549765   .b 136 to 468 170 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
DA567939   .b 136 to 528 153 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BP257130 heart .b 136 to 565 152 to 581       581/581
(100 %)
5 diff
(99.2 %id)
BP259338 heart .b 136 to 546 170 to 580       580/580
(100 %)
0 diff
(100 %id)
BJ996152 hepatoblastoma .b 136 to 384 170 to 418       418/418
(100 %)
0 diff
(100 %id)
BJ996841 hepatoblastoma .b 136 to 583 153 to 600       600/600
(100 %)
0 diff
(100 %id)
BC021002 Placenta, choriocarcinoma .b 136 to 2469 175 to 2508 exact AAA   2508/3473
(72 %)
5 diff
(99.9 %id)
BG282221 melanotic melanoma, skin .b 136 to 770 161 to 794       794/794
(100 %)
7 diff
(99.2 %id)
BG325871 Kidney, renal cell adenocarcinoma .b 136 to 443 159 to 468       468/698
(67 %)
10 diff
(98.6 %id)
BG477893 melanotic melanoma, skin .b 136 to 544 161 to 571       571/685
(83 %)
8 diff
(98.9 %id)
BI551985 brain, hippocampus .b 136 to 720 181 to 777       777/793
(97 %)
22 diff
(97.3 %id)
BI669801 brain, hypothalamus .b 136 to 641 188 to 694       694/694
(100 %)
5 diff
(99.3 %id)
BM918261 blood, natural killer cells, cell line .b 136 to 724 157 to 746       746/1051
(70 %)
19 diff
(98.2 %id)
BU070056 insulinoma, Pancreas .b 136 to 592 161 to 617       617/628
(98 %)
10 diff
(98.5 %id)
BU150178 dorsal root ganglia .b 136 to 850 177 to 896       878/923
(95 %)
20 diff
(97.9 %id)
CB961537 placenta, pre-eclamptic placenta .b 136 to 718 199 to 782       755/782
(96 %)
7 diff
(99.2 %id)
CB988787 Human Placenta, placenta .b 136 to 544 188 to 595       568/864
(65 %)
9 diff
(99.0 %id)
CD109940 Human Placenta, placenta .b 136 to 595 195 to 657       655/806
(81 %)
29 diff
(96.5 %id)
CD109385 Human Placenta, placenta .b 136 to 655 199 to 720       693/802
(86 %)
19 diff
(97.7 %id)
DA614246   .b 136 to 579 152 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
TI_44171789   .b 136 to 720 262 to 858       784/874
(89 %)
26 diff
(97.1 %id)
TI_44344335   .b 136 to 641 268 to 774       690/774
(89 %)
8 diff
(99.0 %id)
DA620018   .b 136 to 536 170 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
BP273735   .b 136 to 544 160 to 568       568/569
(99 %)
5 diff
(99.2 %id)
BP274252 Kidney .b 136 to 493 172 to 529       529/584
(90 %)
11 diff
(98.2 %id)
BP274712 Kidney .b 136 to 517 172 to 553       553/553
(100 %)
22 diff
(96.1 %id)
DA644024   .b 136 to 541 176 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA644686   .b 136 to 566 153 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA644926   .b 136 to 544 170 to 579   capped   578/582
(99 %)
2 diff
(99.7 %id)
DA655753   .b 136 to 539 153 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA661131   .b 136 to 531 173 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA665097   .b 136 to 550 158 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
NM_003794.2   .b 136 to 2475 184 to 2523 exact RefSeq, AAA   2523/2523
(100 %)
0 diff
(100 %id)
DA708761   .b 136 to 444 173 to 482   capped   481/483
(99 %)
3 diff
(99.4 %id)
DA709044   .b 136 to 533 153 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA716836   .b 136 to 531 153 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA732499   .b 136 to 657 170 to 699   capped   699/729
(95 %)
20 diff
(97.3 %id)
DA735238   .b 136 to 770 172 to 805   capped   804/806
(99 %)
3 diff
(99.7 %id)
DA746175   .b 136 to 553 153 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA750586   .b 136 to 536 172 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA760758   .b 136 to 538 178 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA772166 brain .b 136 to 540 172 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BP314610 mammary gland .b 136 to 457 153 to 474       474/476
(99 %)
3 diff
(99.4 %id)
DA817669   .b 136 to 544 153 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA818837   .b 136 to 468 172 to 504   capped   503/503
(100 %)
1 diff
(99.9 %id)
DA822360 pericardium .b 136 to 554 153 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA882692   .b 136 to 536 158 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA883952   .b 136 to 548 154 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
BM837603 Ascites, stomach .b 136 to 543 158 to 564       564/564
(100 %)
0 diff
(100 %id)
TI_1948085723   .b 136 to 678 270 to 812   fully sequenced,   694/812
(85 %)
6 diff
(99.3 %id)
TI_1948085869   .b 136 to 678 266 to 808   fully sequenced,   694/808
(85 %)
7 diff
(99.2 %id)
DA905313   .b 136 to 525 172 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA906948   .b 136 to 550 153 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA907551   .b 136 to 535 153 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BP335138 coronary artery .b 136 to 544 170 to 578       578/582
(99 %)
3 diff
(99.5 %id)
BP341715 stomach mucosa .b 136 to 547 172 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DN996522 breast cancer, Mammary gland (cancer tissue) .b 136 to 563 173 to 600       594/600
(99 %)
7 diff
(98.9 %id)
DB013166 esophageal, tumor tissue .b 136 to 562 153 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB013237 esophageal, tumor tissue .b 136 to 537 170 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DB198280 trachea .b 136 to 468 155 to 488   capped   487/487
(100 %)
5 diff
(99.0 %id)
DB199494 trachea .b 136 to 544 153 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB205598 trachea .b 136 to 535 173 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB209265 trachea .b 136 to 521 170 to 555   capped   554/558
(99 %)
2 diff
(99.7 %id)
DB241865 stomach, tumor tissue .b 136 to 547 153 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB248267 uterus .b 136 to 498 151 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
DB253742 uterus .b 136 to 468 172 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DB259758 uterus .b 136 to 468 172 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DB274278 uterus .b 136 to 532 174 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
AU100306   .b 136 to 265 171 to 300       300/300
(100 %)
1 diff
(99.7 %id)
BP381064   .b 136 to 539 170 to 572       572/638
(89 %)
15 diff
(97.7 %id)
AV651215 corresponding non cancerous liver tissue .b 138 to 516 1 to 379     Submitted on the opposite strand 379/379
(100 %)
0 diff
(100 %id)
DA889265   .b 146 to 705 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BP278722   .b 165 to 753 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DA174201 amygdala .b 209 to 754 2 to 547   capped   546/548
(99 %)
1 diff
(99.9 %id)
BP383200 ilea mucosa .b 215 to 922 1 to 713       713/715
(99 %)
22 diff
(97.0 %id)
R56645 whole brain .b 221 to 544 1 to 324       324/342
(94 %)
3 diff
(99.2 %id)
DA747328   .b 247 to 818 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
AA081201   .b 252 to 704 1 to 456       457/457
(100 %)
7 diff
(98.5 %id)
BU198746   .b 275 to 912 1 to 638       638/909
(70 %)
10 diff
(98.9 %id)
DB480364 hippocampus .b 308 to 818 1 to 510       510/510
(100 %)
1 diff
(99.9 %id)
CB857478 anterior tongue, pooled .b 309 to 863 1 to 555       555/557
(99 %)
2 diff
(99.7 %id)
N44484 melanocyte .b 343 to 663 1 to 321       321/321
(100 %)
0 diff
(100 %id)
DA199518 brain .b 391 to 971 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA829569 placenta .b 428 to 1188 2 to 770   capped   769/853
(90 %)
12 diff
(98.6 %id)
BF061300 fibrotheoma, ovary .b 444 to 611 1 to 169     Submitted on the opposite strand 169/169
(100 %)
3 diff
(98.3 %id)
CR599850 HeLa cells Cot 25-normalized .b 447 to 2440 1 to 1994       1994/1994
(100 %)
0 diff
(100 %id)
AL554986 placenta .b 447 to 1496 1 to 1042       1042/1045
(99 %)
13 diff
(98.8 %id)
BM473930 melanotic melanoma, skin .b 492 to 1307 67 to 896       827/1175
(70 %)
45 diff
(96.2 %id)
BI087957 cervix .b 533 to 1269 1 to 738       738/738
(100 %)
7 diff
(99.1 %id)
TI_1948086037   .b 542 to 1346 931 to 126       806/1423
(56 %)
5 diff
(99.7 %id)
TI_1948086191   .b 542 to 1346 933 to 127       807/1425
(56 %)
11 diff
(99.3 %id)
AF130078 Liver .b 586 to 2475 1 to 1890   AAA   1890/1890
(100 %)
1 diff
(100.0 %id)
AI174908 Liver .b 586 to 1253 1 to 668       668/668
(100 %)
0 diff
(100 %id)
AL513778 placenta .b 586 to 1477 1 to 892   fully sequenced,   891/891
(100 %)
6 diff
(99.4 %id)
BX447159 neuroblastoma .b 586 to 1477 1 to 891       890/891
(99 %)
6 diff
(99.4 %id)
BX447158 neuroblastoma .b 597 to 1415 827 to 9       819/837
(97 %)
6 diff
(99.3 %id)
BI859777 breast, mammary adenocarcinoma, cell line .b 600 to 1404 1 to 804       804/813
(98 %)
8 diff
(99.1 %id)
TI_57189834   .b 600 to 1404 55 to 858       804/813
(98 %)
8 diff
(99.1 %id)
TI_1948085724   .b 617 to 1346 854 to 126   fully sequenced,   729/854
(85 %)
0 diff
(100 %id)
TI_1948085870   .b 617 to 1346 856 to 128   fully sequenced,   729/856
(85 %)
0 diff
(100 %id)
AA746303 germinal center B cell .b 667 to 1139 1 to 473       473/473
(100 %)
1 diff
(99.8 %id)
BP341861 stomach mucosa .b 673 to 1251 1 to 579       579/579
(100 %)
0 diff
(100 %id)
CR749046 embryonal carcinoma, cell line, testis .b 691 to 1205 7 to 521       515/521
(98 %)
6 diff
(98.9 %id)
BM543138 embryonal carcinoma, cell line, testis .b 696 to 1698 1 to 1015       1015/1081
(93 %)
21 diff
(98.1 %id)
BG387522 embryonal carcinoma, cell line, testis .b 721 to 1461 1 to 729       729/964
(75 %)
19 diff
(98.1 %id)
BU854284 testis .b 725 to 1298 1 to 583       583/869
(67 %)
26 diff
(97.1 %id)
BX329289   .b 731 to 1626 896 to 1       896/896
(100 %)
12 diff
(98.7 %id)
CB956248 Pooled-Glandular .b 749 to 1475 1 to 738       738/739
(99 %)
24 diff
(96.8 %id)
BG432821 Kidney .b 767 to 1492 1 to 728       728/767
(94 %)
21 diff
(97.3 %id)
BY995733   .b 781 to 1446 29 to 694       667/694
(96 %)
6 diff
(99.2 %id)
H05716 whole brain .b 795 to 1300 1 to 510       508/581
(87 %)
27 diff
(95.4 %id)
R54163 whole brain .b 799 to 1181 1 to 387       387/447
(86 %)
8 diff
(98.3 %id)
H19177 brain .b 802 to 1300 1 to 503       503/533
(94 %)
15 diff
(97.2 %id)
BU954743 mixed (pool of 40 RNAs) .b 866 to 1482 1 to 617       617/622
(99 %)
8 diff
(98.8 %id)
BM711348 eye, fetal eyes .b 876 to 1384 1 to 509       509/509
(100 %)
0 diff
(100 %id)
AL047705 uterus .b 884 to 1501 1 to 620       620/620
(100 %)
3 diff
(99.6 %id)
AW403356 lymph .b 897 to 1246 8 to 357       350/357
(98 %)
6 diff
(98.4 %id)
TI_154140004   .b 897 to 1487 80 to 660       581/587
(98 %)
18 diff
(97.0 %id)
CF147210 CNCAP(3)T-225 cell line, Prostate .b 901 to 1573 1 to 668       668/686
(97 %)
11 diff
(98.4 %id)
BG978406 colon_ins .b 905 to 1176 303 to 32       272/303
(89 %)
1 diff
(99.7 %id)
CR596306 Neuroblastoma Cot 25-normalized .b 905 to 2439 1 to 1535       1535/1535
(100 %)
0 diff
(100 %id)
AL526313 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 905 to 1644 1 to 739   fully sequenced,   739/739
(100 %)
0 diff
(100 %id)
CX166098 human embryonic stem cells differentiated toan early endodermal cell type .b 906 to 1694 1 to 789       789/789
(100 %)
1 diff
(99.9 %id)
TI_154179800   .b 908 to 1573 70 to 730       661/830
(79 %)
6 diff
(99.3 %id)
BP276049 Kidney .b 909 to 1490 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE565952 bladder, carcinoma, cell line .b 943 to 1541 1 to 582       582/836
(69 %)
24 diff
(97.2 %id)
CN340635 embryonic stem cells, cell lines H1, H7, andH9 .b 961 to 1480 19 to 538   AAA   520/538
(96 %)
6 diff
(98.9 %id)
AL513777 placenta .b 1008 to 1477 470 to 1   fully sequenced,   470/470
(100 %)
5 diff
(99.0 %id)
AW615085 2 pooled high-grade transitional celltumors, genitourinary tract .b 1018 to 1480 484 to 21   AAA   464/464
(100 %)
13 diff
(97.2 %id)
AA171969   .b 1039 to 1454 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
DN920503   .b 1045 to 1384 1 to 340       340/340
(100 %)
1 diff
(99.8 %id)
BF575246 muscle (skeletal) .b 1049 to 1724 1 to 656       656/861
(76 %)
31 diff
(96.4 %id)
BF672270 muscle (skeletal) .b 1049 to 1659 1 to 606       606/606
(100 %)
6 diff
(99.1 %id)
BG504828 embryonal carcinoma, testis .b 1098 to 1885 1 to 802       802/812
(98 %)
53 diff
(93.5 %id)
CN340638 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1176 to 1677 16 to 520       505/520
(97 %)
5 diff
(99.1 %id)
ES314470 occipital scalp hair, skin .b 1178 to 1325 1 to 147       147/147
(100 %)
4 diff
(97.3 %id)
AI092325 heart .b 1190 to 1476 287 to 1       287/287
(100 %)
3 diff
(99.0 %id)
FN145994 breast carcinoma .b 1239 to 1329 1 to 98       96/98
(97 %)
3 diff
(97.0 %id)
Z19976   .b 1298 to 1512 1 to 217       217/217
(100 %)
2 diff
(99.1 %id)
AL577587 placenta .b 1300 to 2419 1132 to 23       1110/1133
(97 %)
0 diff
(100 %id)
BG207192   .b 1301 to 1472 182 to 10     Submitted on the opposite strand 173/182
(95 %)
0 diff
(100 %id)
BG249621 hypernephroma, cell line, Kidney .b 1331 to 1925 1 to 593       593/817
(72 %)
5 diff
(99.4 %id)
BG249620 hypernephroma, cell line, Kidney .b 1332 to 1925 1 to 594       594/820
(72 %)
1 diff
(99.9 %id)
BX423522 brain, fetal brain .b 1349 to 2443 1081 to 2       1080/1081
(99 %)
0 diff
(100 %id)
FN100852 breast carcinoma .b 1399 to 1488 1 to 88       88/89
(98 %)
9 diff
(89.9 %id)
BF029705 bladder, carcinoma, cell line .b 1418 to 2034 1 to 621       621/890
(69 %)
42 diff
(95.3 %id)
BG615937 embryonal carcinoma, testis .b 1451 to 2258 1 to 818       818/930
(87 %)
38 diff
(96.0 %id)
BU941258 mixed (pool of 40 RNAs) .b 1462 to 2366 1 to 906       906/906
(100 %)
37 diff
(96.0 %id)
AA126504 uterus .b 1467 to 1733 1 to 268       268/270
(99 %)
5 diff
(98.2 %id)
BX099262 uterus .b 1468 to 2176 1 to 710       710/710
(100 %)
2 diff
(99.8 %id)
AW750652 colon_normal .b 1507 to 1848 345 to 7       339/348
(97 %)
0 diff
(100 %id)
AW750654 colon_normal .b 1507 to 1840 13 to 339       327/339
(96 %)
6 diff
(98.3 %id)
AA455734 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1511 to 1760 1 to 250       250/250
(100 %)
1 diff
(99.6 %id)
BG505329 embryonal carcinoma, testis .b 1532 to 2281 1 to 755       755/761
(99 %)
23 diff
(97.0 %id)
AL519696 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1558 to 2436 877 to 1       877/921
(95 %)
1 diff
(99.9 %id)
AV703899 adrenal gland .b 1563 to 1899 1 to 336       336/338
(99 %)
10 diff
(97.1 %id)
DN920502   .b 1591 to 2101 511 to 1       511/511
(100 %)
1 diff
(99.9 %id)
AA193636.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1601 to 2029 14 to 442     also hits gene MX1 429/443
(96 %)
3 diff
(99.4 %id)
AL526283 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1614 to 2439 826 to 1   fully sequenced,   826/826
(100 %)
0 diff
(100 %id)
TI_149273488   .b 1654 to 2475 901 to 90   AAA   812/1001
(81 %)
16 diff
(98.5 %id)
AL537413 brain, fetal brain .b 1663 to 2459 803 to 1       803/808
(99 %)
57 diff
(93.0 %id)
CB159329 Liver .b 1666 to 2230 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BG434590 placenta .b 1692 to 2471 1 to 777       777/777
(100 %)
31 diff
(96.1 %id)
BU171548 melanotic melanoma, skin .b 1706 to 2469 1 to 764       764/790
(96 %)
3 diff
(99.7 %id)
BE972725 testis .b 1718 to 2296 1 to 575       575/575
(100 %)
8 diff
(98.7 %id)
CD579269 brain .b 1745 to 2475 1 to 730       730/866
(84 %)
29 diff
(96.7 %id)
BM766192 stomach .b 1773 to 2403 1 to 631       631/631
(100 %)
0 diff
(100 %id)
AI375854 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1781 to 2241 461 to 1       461/461
(100 %)
0 diff
(100 %id)
BQ771774 Chondrosarcoma Grade II, Left Pelvis .b 1786 to 2468 695 to 18   AAA   678/678
(100 %)
4 diff
(99.5 %id)
BM665934 eye, fetal eyes .b 1790 to 2469 699 to 19   AAA   681/681
(100 %)
2 diff
(99.8 %id)
CB156536 brain .b 1801 to 2467 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
BU675853 lung, Primary Lung Epithelial Cells .b 1805 to 2475 689 to 19   AAA   671/671
(100 %)
0 diff
(100 %id)
BF790677 muscle (skeletal) .b 1817 to 2221 223 to 635       545/897
(60 %)
38 diff
(95.8 %id)
BQ027074 Chondrosarcoma, Left Pubic Bone .b 1854 to 2469 630 to 19   AAA   612/612
(100 %)
4 diff
(99.4 %id)
BG211894   .b 1857 to 2444 663 to 74     Submitted on the opposite strand 590/875
(67 %)
0 diff
(100 %id)
CD678054 eye, Trabecular meshwork .b 1865 to 2226 1 to 362       362/362
(100 %)
2 diff
(99.5 %id)
BF872417 lung_tumor .b 1868 to 2311 450 to 7     Submitted on the opposite strand 444/450
(98 %)
0 diff
(100 %id)
TI_157613712   .b 1868 to 2469 682 to 76   AAA   607/652
(93 %)
36 diff
(94.5 %id)
AV732766 hypothalamus .b 1903 to 2323 1 to 418       418/420
(99 %)
6 diff
(98.6 %id)
AI080478 germ cell tumor .b 1907 to 2476 571 to 2       570/571
(99 %)
0 diff
(100 %id)
AA126433 uterus .b 1917 to 2475 556 to 1       556/556
(100 %)
7 diff
(98.8 %id)
AU152238   .b 1923 to 2475 550 to 1       550/550
(100 %)
10 diff
(98.2 %id)
BJ996153 hepatoblastoma .b 1932 to 2444 513 to 1       513/513
(100 %)
0 diff
(100 %id)
AI125497   .b 1955 to 2469 530 to 16   AAA   515/515
(100 %)
0 diff
(100 %id)
AW051709 Kidney .b 1958 to 2481 524 to 1       524/524
(100 %)
0 diff
(100 %id)
AI818235 adenocarcinoma, Pancreas .b 1960 to 2469 515 to 5       511/515
(99 %)
0 diff
(100 %id)
AA205693   .b 1968 to 2475 533 to 26   AAA   508/508
(100 %)
7 diff
(98.7 %id)
H04185 placenta .b 1976 to 2273 1 to 300   fully sequenced,   300/300
(100 %)
2 diff
(99.4 %id)
BF694051 muscle (skeletal) .b 1976 to 2479 1 to 502   AAA   502/873
(57 %)
17 diff
(98.1 %id)
EC466001 Prostate .b 1979 to 2081 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC480533 Prostate .b 1979 to 2081 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC538372 Prostate .b 1979 to 2081 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC567755 Prostate .b 1979 to 2081 1 to 103       103/103
(100 %)
0 diff
(100 %id)
FN159162 breast carcinoma .b 1979 to 2086 104 to 1     Submitted on the opposite strand 104/104
(100 %)
4 diff
(96.2 %id)
AU149867   .b 1986 to 2475 493 to 2       492/498
(98 %)
0 diff
(100 %id)
AA922683 pooled germ cell tumors .b 1988 to 2468 481 to 1       481/481
(100 %)
0 diff
(100 %id)
N34756 melanocyte .b 1989 to 2477 491 to 1       491/491
(100 %)
5 diff
(99.0 %id)
R21934 placenta .b 1999 to 2342 1 to 351       351/351
(100 %)
7 diff
(98.1 %id)
AI537696 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2002 to 2475 480 to 12   AAA   469/495
(94 %)
22 diff
(95.6 %id)
N25075 nose, olfactory epithelium .b 2008 to 2476 472 to 2       471/477
(98 %)
0 diff
(100 %id)
AI393614 pooled .b 2010 to 2475 466 to 1       466/466
(100 %)
2 diff
(99.6 %id)
DB542530 hippocampus .b 2011 to 2475 1 to 466     Submitted on the opposite strand 466/466
(100 %)
7 diff
(98.5 %id)
DB549117 hippocampus .b 2014 to 2473 1 to 460     Submitted on the opposite strand 460/462
(99 %)
2 diff
(99.6 %id)
DB554793 hypothalamus .b 2021 to 2469 1 to 453     Submitted on the opposite strand 453/453
(100 %)
11 diff
(97.6 %id)
DB544158 hippocampus .b 2026 to 2481 1 to 457     Submitted on the opposite strand 457/457
(100 %)
2 diff
(99.6 %id)
DB557076 hypothalamus .b 2026 to 2469 1 to 446     Submitted on the opposite strand 446/446
(100 %)
17 diff
(96.2 %id)
AI253066 Kidney .b 2032 to 2475 454 to 11   AAA   444/444
(100 %)
0 diff
(100 %id)
AA081103   .b 2033 to 2470 449 to 4       446/542
(82 %)
0 diff
(100 %id)
DB538753 hippocampus .b 2035 to 2475 1 to 443     Submitted on the opposite strand 443/443
(100 %)
6 diff
(98.7 %id)
AA171732   .b 2035 to 2470 441 to 1       441/441
(100 %)
6 diff
(98.7 %id)
AI452409 pooled .b 2037 to 2476 445 to 6       440/445
(98 %)
0 diff
(100 %id)
DB538475 hippocampus .b 2039 to 2475 1 to 436     Submitted on the opposite strand 436/436
(100 %)
4 diff
(99.1 %id)
N63077 multiple sclerosis lesions .b 2048 to 2469 434 to 5       430/434
(99 %)
0 diff
(100 %id)
AI565605 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .b 2049 to 2469 423 to 3       421/423
(99 %)
0 diff
(100 %id)
AA814698 brain, substantia nigra .b 2054 to 2477 426 to 3       424/426
(99 %)
0 diff
(100 %id)
AW301234 Kidney .b 2059 to 2476 423 to 6       418/423
(98 %)
0 diff
(100 %id)
AI003993   .b 2063 to 2476 416 to 3       414/416
(99 %)
0 diff
(100 %id)
CF528199 placenta .b 2063 to 2469 425 to 18   AAA   408/408
(100 %)
5 diff
(98.8 %id)
AA193599 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2067 to 2476 426 to 7       420/430
(97 %)
0 diff
(100 %id)
BE049221 colon, moderately-differentiated adenocarcinoma .b 2072 to 2481 410 to 1       410/410
(100 %)
0 diff
(100 %id)
AU155789 placenta .b 2076 to 2475 401 to 1       401/401
(100 %)
2 diff
(99.6 %id)
AI187416   .b 2081 to 2482 406 to 5   tiling clone,   402/406
(99 %)
0 diff
(100 %id)
AW474751 lymph node, lymphoma, follicular mixed small and largecell .b 2081 to 2476 397 to 2       396/397
(99 %)
0 diff
(100 %id)
H05717 whole brain .b 2084 to 2481 420 to 15   AAA   406/406
(100 %)
14 diff
(96.6 %id)
AW241253 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .b 2098 to 2475 378 to 1       378/382
(98 %)
4 diff
(99.0 %id)
AA649248 germinal center B cell .b 2113 to 2469 382 to 26   AAA   357/357
(100 %)
0 diff
(100 %id)
BE716928 head_neck .b 2115 to 2365 297 to 47       251/297
(84 %)
0 diff
(100 %id)
BE770833 prostate_tumor .b 2115 to 2446 1 to 332       332/336
(98 %)
14 diff
(95.9 %id)
BE770800 prostate_tumor .b 2122 to 2446 1 to 325       325/329
(98 %)
8 diff
(97.6 %id)
AW959652   .b 2123 to 2476 363 to 9     Submitted on the opposite strand 355/363
(97 %)
0 diff
(100 %id)
BE770798 prostate_tumor .b 2123 to 2420 295 to 1       295/303
(97 %)
4 diff
(98.7 %id)
BE770799 prostate_tumor .b 2123 to 2395 191 to 464       274/297
(92 %)
6 diff
(98.0 %id)
BE770801 prostate_tumor .b 2123 to 2445 335 to 11       325/343
(94 %)
0 diff
(100 %id)
BE770809 prostate_tumor .b 2123 to 2445 325 to 1       325/333
(97 %)
9 diff
(97.3 %id)
BE770828 prostate_tumor .b 2123 to 2421 299 to 2       298/307
(97 %)
0 diff
(100 %id)
BE770831 prostate_tumor .b 2123 to 2409 286 to 2       285/294
(96 %)
0 diff
(100 %id)
BE770837 prostate_tumor .b 2123 to 2421 296 to 1       296/304
(97 %)
6 diff
(98.1 %id)
BQ372901 prostate_tumor .b 2123 to 2418 294 to 2       293/302
(97 %)
0 diff
(100 %id)
BE770829 prostate_tumor .b 2129 to 2455 1 to 328       328/339
(96 %)
13 diff
(96.2 %id)
BE770830 prostate_tumor .b 2129 to 2446 1 to 316       316/320
(98 %)
12 diff
(96.3 %id)
BE770812 prostate_tumor .b 2130 to 2446 1 to 314       314/318
(98 %)
15 diff
(95.3 %id)
BE770835 prostate_tumor .b 2132 to 2446 1 to 315       315/319
(98 %)
7 diff
(97.9 %id)
BE770793 prostate_tumor .b 2134 to 2441 1 to 310       310/320
(96 %)
9 diff
(97.2 %id)
DW421761 Liver .b 2134 to 2360 17 to 243   AAA   227/243
(93 %)
6 diff
(97.6 %id)
DW437860 Liver .b 2134 to 2364 17 to 247       231/247
(93 %)
6 diff
(97.6 %id)
AI393374 pooled .b 2134 to 2466 341 to 9       333/341
(97 %)
0 diff
(100 %id)
BE770821 prostate_tumor .b 2137 to 2446 1 to 312       312/316
(98 %)
22 diff
(93.1 %id)
BE770810 prostate_tumor .b 2142 to 2446 1 to 304       304/308
(98 %)
9 diff
(97.1 %id)
AW272883 colon, moderately-differentiated adenocarcinoma .b 2143 to 2472 332 to 3       330/350
(94 %)
0 diff
(100 %id)
BF807360 colon_ins .b 2154 to 2416 267 to 5     Submitted on the opposite strand 263/273
(96 %)
0 diff
(100 %id)
BF998447 placenta_normal .b 2154 to 2397 243 to 3       241/249
(96 %)
0 diff
(100 %id)
BF998469 placenta_normal .b 2154 to 2412 268 to 9       260/274
(94 %)
0 diff
(100 %id)
BF998489 placenta_normal .b 2154 to 2416 264 to 5       260/270
(96 %)
0 diff
(100 %id)
BF998506 placenta_normal .b 2154 to 2418 267 to 4       264/273
(96 %)
0 diff
(100 %id)
BF998520 placenta_normal .b 2154 to 2419 267 to 2       266/273
(97 %)
0 diff
(100 %id)
BF998560 placenta_normal .b 2154 to 2391 236 to 1       236/242
(97 %)
13 diff
(94.7 %id)
BF998573 placenta_normal .b 2154 to 2364 224 to 15       210/230
(91 %)
0 diff
(100 %id)
BF999254 placenta_normal .b 2154 to 2410 259 to 4       256/265
(96 %)
0 diff
(100 %id)
BF999262 placenta_normal .b 2154 to 2389 235 to 2       234/241
(97 %)
0 diff
(100 %id)
BG001217 placenta_normal .b 2154 to 2383 231 to 3       229/237
(96 %)
0 diff
(100 %id)
BQ366881 placenta_normal .b 2154 to 2412 261 to 4       258/267
(96 %)
0 diff
(100 %id)
BE840746 prostate_normal .b 2156 to 2434 279 to 2       278/280
(99 %)
0 diff
(100 %id)
BQ372839 prostate_tumor .b 2156 to 2446 1 to 293       293/294
(99 %)
14 diff
(95.3 %id)
BF999260 placenta_normal .b 2160 to 2406 1 to 247       247/247
(100 %)
7 diff
(97.2 %id)
BE770796 prostate_tumor .b 2167 to 2446 33 to 309       277/313
(88 %)
6 diff
(98.1 %id)
BF998458 placenta_normal .b 2167 to 2428 20 to 278       259/281
(92 %)
10 diff
(96.5 %id)
BF999251 placenta_normal .b 2167 to 2428 10 to 268       259/271
(95 %)
6 diff
(97.8 %id)
BF999259 placenta_normal .b 2167 to 2428 18 to 279       262/282
(92 %)
8 diff
(97.2 %id)
BG001218 placenta_normal .b 2167 to 2428 12 to 272       261/275
(94 %)
6 diff
(97.9 %id)
BG001220 placenta_normal .b 2167 to 2428 16 to 276       261/279
(93 %)
13 diff
(95.4 %id)
BG001224 placenta_normal .b 2167 to 2428 10 to 269       260/272
(95 %)
6 diff
(97.8 %id)
BF998462 placenta_normal .b 2169 to 2428 4 to 260       257/263
(97 %)
6 diff
(97.8 %id)
BF999250 placenta_normal .b 2171 to 2419 1 to 256       256/268
(95 %)
17 diff
(93.7 %id)
BF998570 placenta_normal .b 2173 to 2428 1 to 257       257/260
(98 %)
15 diff
(94.3 %id)
BG001219 placenta_normal .b 2174 to 2428 1 to 250       250/253
(98 %)
12 diff
(95.3 %id)
BF998535 placenta_normal .b 2177 to 2428 17 to 268       252/271
(92 %)
6 diff
(97.8 %id)
AI559905 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2182 to 2475 296 to 1       296/296
(100 %)
2 diff
(99.4 %id)
AU156431 placenta .b 2186 to 2475 290 to 1       290/292
(99 %)
0 diff
(100 %id)
AA559117 adrenal adenoma, adrenal gland .b 2191 to 2468 278 to 1       278/278
(100 %)
1 diff
(99.7 %id)
BF998530 placenta_normal .b 2200 to 2390 189 to 1       189/189
(100 %)
12 diff
(93.7 %id)
AW297150   .b 2204 to 2469 284 to 19   AAA   266/266
(100 %)
4 diff
(98.5 %id)
BE716919 head_neck .b 2209 to 2421 213 to 1       213/213
(100 %)
9 diff
(95.8 %id)
AI868772 pooled .b 2216 to 2481 266 to 1       266/266
(100 %)
1 diff
(99.7 %id)
AW664201 2 pooled high-grade transitional celltumors, genitourinary tract .b 2225 to 2472 252 to 5       248/252
(98 %)
0 diff
(100 %id)
CD678053 eye, Trabecular meshwork .b 2226 to 2468 276 to 34   AAA   243/243
(100 %)
14 diff
(94.3 %id)
AW149984 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2228 to 2469 243 to 2       242/243
(99 %)
0 diff
(100 %id)
BQ366880 placenta_normal .b 2233 to 2428 1 to 201       201/204
(98 %)
12 diff
(94.2 %id)
H18510 brain .b 2240 to 2481 245 to 1       245/245
(100 %)
4 diff
(98.4 %id)
H04186 placenta .b 2243 to 2448 216 to 1   fully sequenced,   216/216
(100 %)
0 diff
(100 %id)
R54108 whole brain .b 2251 to 2476 226 to 1       226/226
(100 %)
2 diff
(99.2 %id)
AA745284 Ewing's sarcoma .b 2251 to 2475 225 to 1       225/225
(100 %)
2 diff
(99.2 %id)
CA312222 Human Lung Epithelial cells, lung .b 2251 to 2475 243 to 19   AAA   225/253
(88 %)
3 diff
(98.9 %id)
BQ921360 leiomyosarcoma, uterus .b 2256 to 2470 16 to 231   AAA   216/231
(93 %)
8 diff
(96.6 %id)
N63608 multiple sclerosis lesions .b 2274 to 2469 198 to 3       196/198
(98 %)
0 diff
(100 %id)
AA312916   .b 2280 to 2475 196 to 1       196/196
(100 %)
0 diff
(100 %id)
AI368444 brain, glioblastoma (pooled) .b 2353 to 2469 128 to 12   AAA   117/128
(91 %)
2 diff
(98.5 %id)
EC469287 Prostate .b 2402 to 2479 1 to 77       77/80
(96 %)
6 diff
(92.5 %id)
CA335534 posterior tongue (pooled) .c 1 to 629 1 to 629   tiling clone,   629/629
(100 %)
0 diff
(100 %id)
CN400080 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 601 to 1197 12 to 609   tiling clone,   598/609
(98 %)
7 diff
(98.9 %id)
BM449794 melanotic melanoma, skin .d 136 to 854 154 to 874   tiling clone,   874/919
(95 %)
11 diff
(98.9 %id)
BM543883 ovary (pool of 3) .d 136 to 882 165 to 926 R201Q L202V K212E K216X D220G ... tiling clone,   926/1093
(84 %)
40 diff
(96.4 %id)
CN340637 embryonic stem cells, cell lines H1, H7, andH9 .e 136 to 745 162 to 772 E224K D239G V240C Y241V A242C ... tiling clone,   772/772
(100 %)
7 diff
(99.1 %id)
AA161270   .f 1 to 548 3 to 546   tiling clone,   550/555
(99 %)
24 diff
(95.7 %id)
H73661 liver and spleen .f 470 to 866 1 to 405   tiling clone,   405/435
(93 %)
11 diff
(97.5 %id)
H73354 liver and spleen .f 1008 to 1419 423 to 1   tiling clone,   423/446
(94 %)
16 diff
(96.5 %id)
W73327 Pancreas, pancreatic islet .f 1075 to 1481 1 to 407   tiling clone,   407/408
(99 %)
6 diff
(98.6 %id)
AA161271   .f 1876 to 2410 543 to 4   tiling clone,   540/545
(99 %)
0 diff
(100 %id)
AL050355 brain .g 1 to 2187 2220 to 38 exact tiling clone, available from DKFZ, AAA Submitted on the opposite strand 2183/2183
(100 %)
9 diff
(99.6 %id)
DA715981   .h 136 to 494 173 to 531 E34G A36G G37R E38R E39R ... tiling clone, capped   530/530
(100 %)
1 diff
(99.9 %id)
BP338630 Spleen .i 1 to 578 1 to 578 exact tiling clone,   578/578
(100 %)
3 diff
(99.5 %id)
DB210027 trachea .j-u 1 to 563 2 to 564 G42W V43G S44E I45Y L47P ... tiling clone, capped   563/563
(100 %)
4 diff
(99.3 %id)
AW855259 colon .k-u 1 to 477 1 to 475 D2C Q8S L9Y L10S R11G ... tiling clone,   475/475
(100 %)
18 diff
(96.3 %id)
AV715043   Gene SNX4, variant not shown         Suspected internal deletion, this clone was ignored    
CD617575   Gene SNX4, variant not shown              
BE770775 prostate_tumor Gene SNX4, variant not shown         This clone was ignored    
BY797709 eye Gene SNX4, variant not shown         This clone was ignored    
DB295824   Gene SNX4, variant not shown         This clone was ignored    
DA032547   Gene SNX4, variant not shown       capped This clone was ignored    
CN340636 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene SNX4, variant not shown              
DB168827 kidney, tumor tissue Gene SNX4, variant not shown       capped This clone was ignored    
AA524345 colon Gene SNX4, variant not shown         Suspected internal deletion, this clone was ignored    
CA335514 posterior tongue (pooled) Gene SNX4, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI