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Gene SNX17TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
463 supporting clones for gene SNX17 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM787571 stomach .a 1 to 663 1 to 663   tiling clone,   663/663
(100 %)
0 diff
(100 %id)
AU142148 thyroid gland .a 1 to 753 2 to 754   capped   753/755
(99 %)
4 diff
(99.5 %id)
DA080804 cerebellum .a 2 to 584 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA159921 amygdala .a 2 to 580 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA308119 hippocampus .a 2 to 585 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA385456 thalamus .a 2 to 585 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA540466 lung .a 2 to 580 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA541242 lung .a 2 to 585 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA865496 Prostate .a 2 to 532 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
DB033696 testis .a 2 to 596 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DB039777 testis .a 2 to 582 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB246655   .a 2 to 713 2 to 716   capped   715/829
(86 %)
5 diff
(99.4 %id)
DB260698 uterus .a 2 to 585 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA008816 adrenal gland .a 4 to 807 2 to 804   capped   803/826
(97 %)
8 diff
(99.1 %id)
DA051203   .a 4 to 585 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA343352 substantia nigra .a 4 to 600 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA372486 thalamus .a 4 to 625 2 to 623   capped   622/622
(100 %)
0 diff
(100 %id)
DA373080 thalamus .a 4 to 597 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA531536 brain .a 4 to 607 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA557704   .a 4 to 588 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BG831966 epithelioid carcinoma cell line, Pancreas .a 4 to 626 1 to 647       641/978
(65 %)
37 diff
(96.3 %id)
DA846921 placenta .a 4 to 584 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA936077 Spleen .a 4 to 582 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA937094 Spleen .a 4 to 585 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BP361434 thalamus .a 6 to 588 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA251777 caudate nucleus .a 7 to 587 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA274320 corpus callosum .a 7 to 589 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA386183 thalamus .a 7 to 586 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
TI_44343178   .a 7 to 747 144 to 883       740/898
(82 %)
14 diff
(98.5 %id)
DA925857 small intestine .a 7 to 588 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB191321 lung, tumor tissue .a 7 to 587 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB191775 lung, tumor tissue .a 7 to 586 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA206208 brain .a 8 to 587 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BX360115 Placenta Cot 25-normalized .a 8 to 1010 5 to 999       995/1004
(99 %)
46 diff
(95.5 %id)
AW403964 lymph .a 12 to 431 1 to 420       420/420
(100 %)
4 diff
(99.1 %id)
DA931081 small intestine .a 12 to 600 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BP227177   .a 13 to 594 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP341800 stomach mucosa .a 13 to 595 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DB467970 hippocampus .a 14 to 472 1 to 459       459/459
(100 %)
1 diff
(99.8 %id)
TI_57183421   .a 14 to 836 28 to 850       823/850
(96 %)
11 diff
(98.8 %id)
TI_57163363   .a 14 to 827 29 to 844       816/844
(96 %)
11 diff
(98.7 %id)
TI_59379866   .a 14 to 744 109 to 858       746/844
(88 %)
38 diff
(95.5 %id)
TI_59380020   .a 14 to 747 102 to 841       738/777
(94 %)
13 diff
(98.4 %id)
CN483091 eye .a 15 to 637 1 to 623       623/623
(100 %)
0 diff
(100 %id)
TI_57197714   .a 15 to 698 46 to 734       689/734
(93 %)
12 diff
(98.4 %id)
TI_57182612   .a 15 to 748 28 to 763       736/847
(86 %)
20 diff
(97.7 %id)
TI_57172525   .a 15 to 736 24 to 757       734/951
(77 %)
20 diff
(97.9 %id)
BG328283 adenocarcinoma cell line, colon .a 16 to 747 1 to 738       738/903
(81 %)
18 diff
(98.1 %id)
BM552511 astrocytoma grade IV, cell line, brain .a 16 to 903 1 to 890       890/1007
(88 %)
14 diff
(98.7 %id)
BU187623 eye, retinoblastoma .a 17 to 810 1 to 804       804/892
(90 %)
13 diff
(98.6 %id)
DN602060 human embryonic stem cells .a 17 to 620 1 to 604       604/604
(100 %)
0 diff
(100 %id)
TI_43961629   .a 18 to 810 59 to 851       793/865
(91 %)
14 diff
(98.4 %id)
TI_57178148   .a 18 to 737 1 to 753       728/753
(96 %)
55 diff
(92.7 %id)
BI223109 cervical carcinoma cell line, cervix .a 19 to 895 1 to 874       874/876
(99 %)
16 diff
(98.2 %id)
BI223282 cervical carcinoma cell line, cervix .a 19 to 809 1 to 792       792/806
(98 %)
8 diff
(99.1 %id)
TI_154140735   .a 19 to 595 81 to 656       576/576
(100 %)
12 diff
(98.0 %id)
ES314450 occipital scalp hair, skin .a 20 to 146 1 to 127       127/127
(100 %)
0 diff
(100 %id)
BM466885 eye, retinoblastoma .a 20 to 703 1 to 685       685/1055
(64 %)
9 diff
(99.2 %id)
CR985859 T-Lymphocytes .a 20 to 720 1 to 703       703/703
(100 %)
2 diff
(99.8 %id)
BM923945 pooled colon, kidney, stomach .a 21 to 1021 1 to 1007       1005/1009
(99 %)
18 diff
(98.3 %id)
BU195340 eye, retinoblastoma .a 21 to 742 1 to 727       727/839
(86 %)
6 diff
(99.3 %id)
TI_57218285   .a 21 to 593 34 to 609       576/609
(94 %)
6 diff
(99.1 %id)
TI_43961602   .a 21 to 887 70 to 939       868/939
(92 %)
17 diff
(98.2 %id)
TI_57166978   .a 21 to 799 35 to 814       780/814
(95 %)
6 diff
(99.3 %id)
DA382960 thalamus .a 22 to 659 2 to 639   capped   638/638
(100 %)
0 diff
(100 %id)
BP228484   .a 22 to 603 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BQ054449 lymph, lymphoma, cell line .a 22 to 857 1 to 839       839/1048
(80 %)
18 diff
(98.3 %id)
BQ057773 lymph, lymphoma, cell line .a 22 to 903 1 to 888       888/1028
(86 %)
13 diff
(98.8 %id)
TI_57200890   .a 22 to 639 27 to 645       619/645
(95 %)
6 diff
(99.1 %id)
TI_57241660   .a 22 to 888 29 to 899       869/899
(96 %)
28 diff
(96.9 %id)
TI_59389831   .a 22 to 737 59 to 776       718/718
(100 %)
5 diff
(99.4 %id)
DB025816 testis .a 22 to 635 2 to 615   capped   614/614
(100 %)
0 diff
(100 %id)
BQ054553 lymph, lymphoma, cell line .a 23 to 899 1 to 891       891/1044
(85 %)
16 diff
(98.5 %id)
BQ069741 brain, neuroblastoma, cell line .a 23 to 810 1 to 795       795/908
(87 %)
6 diff
(99.4 %id)
BU190278 melanotic melanoma, cell line, skin .a 23 to 903 1 to 886       886/907
(97 %)
15 diff
(98.4 %id)
BU162461 melanotic melanoma, cell line, skin .a 23 to 862 1 to 847       847/926
(91 %)
8 diff
(99.2 %id)
BU166630 melanotic melanoma, cell line, skin .a 23 to 873 1 to 861       861/916
(93 %)
24 diff
(97.4 %id)
BU177916 melanotic melanoma, cell line, skin .a 23 to 810 1 to 789       789/845
(93 %)
4 diff
(99.6 %id)
BU178168 melanotic melanoma, skin .a 23 to 864 1 to 849       849/862
(98 %)
15 diff
(98.3 %id)
BU180196 melanotic melanoma, cell line, skin .a 23 to 809 1 to 792       792/956
(82 %)
7 diff
(99.3 %id)
BQ684329 melanotic melanoma, cell line, skin .a 23 to 810 1 to 790       790/948
(83 %)
6 diff
(99.4 %id)
BU839036 melanotic melanoma, cell line, skin .a 23 to 806 1 to 785       785/980
(80 %)
12 diff
(98.8 %id)
BU839139 melanotic melanoma, cell line, skin .a 23 to 747 1 to 726       726/895
(81 %)
12 diff
(98.7 %id)
BQ679438 melanotic melanoma, cell line, skin .a 23 to 808 1 to 788       788/866
(90 %)
5 diff
(99.5 %id)
BQ641994 lymph, lymphoma, cell line .a 23 to 903 1 to 883       883/910
(97 %)
5 diff
(99.5 %id)
BU855741 ovary, teratocarcinoma, cell line .a 23 to 900 1 to 892       892/977
(91 %)
18 diff
(98.2 %id)
DA631633 Kidney .a 23 to 610 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA588377 lung .a 25 to 608 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA555283   .a 26 to 609 8 to 591   capped   584/584
(100 %)
0 diff
(100 %id)
AU124166   .a 26 to 697 27 to 697   capped   671/671
(100 %)
4 diff
(99.5 %id)
CN485167 eye .a 27 to 647 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BI489746 pooled brain, lung, testis .a 27 to 810 1 to 784       784/798
(98 %)
7 diff
(99.2 %id)
CF131912 Chondrosarcoma Lung Metastasis cell lines, lung .a 27 to 698 1 to 671       671/671
(100 %)
3 diff
(99.6 %id)
TI_59390812   .a 27 to 652 108 to 734       627/638
(98 %)
5 diff
(99.3 %id)
BP288956 lung .a 27 to 608 1 to 582       582/582
(100 %)
0 diff
(100 %id)
TI_154188640   .a 27 to 560 121 to 655       535/887
(60 %)
37 diff
(95.9 %id)
TI_159677614   .a 27 to 793 51 to 809       759/1010
(75 %)
11 diff
(99.0 %id)
BU169964 embryonal carcinoma, cell line, testis .a 29 to 834 1 to 809       809/898
(90 %)
8 diff
(99.2 %id)
TI_57239933   .a 29 to 810 100 to 889       790/958
(82 %)
23 diff
(97.6 %id)
BQ230044 large cell carcinoma, lung .a 30 to 899 11 to 888       878/893
(98 %)
23 diff
(97.5 %id)
TI_59385144   .a 30 to 810 106 to 893       788/806
(97 %)
15 diff
(98.2 %id)
TI_154170661   .a 30 to 652 78 to 701       624/914
(68 %)
8 diff
(99.2 %id)
BM555955 amelanotic melanoma, cell line, skin .a 31 to 1078 1 to 1054       1054/1084
(97 %)
29 diff
(97.4 %id)
CX752412 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 31 to 733 1 to 703     Submitted on the opposite strand 703/703
(100 %)
0 diff
(100 %id)
DB266592 uterus .a 31 to 612 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BE252344 eye, retinoblastoma .a 32 to 727 1 to 696       696/719
(96 %)
13 diff
(98.2 %id)
BE890400 melanotic melanoma, skin .a 34 to 742 1 to 710       710/888
(79 %)
7 diff
(99.3 %id)
BU172856 melanotic melanoma, skin .a 34 to 747 1 to 716       716/919
(77 %)
16 diff
(98.3 %id)
TI_57146570   .a 34 to 713 32 to 712       681/712
(95 %)
9 diff
(98.8 %id)
BG831735 epithelioid carcinoma cell line, Pancreas .a 35 to 658 1 to 624       624/624
(100 %)
0 diff
(100 %id)
BG387877 embryonal carcinoma, cell line, testis .a 36 to 816 1 to 787       787/1090
(72 %)
21 diff
(98.1 %id)
CT003790 T-Lymphocytes .a 36 to 776 1 to 743       743/746
(99 %)
7 diff
(99.1 %id)
TI_154188305   .a 36 to 903 117 to 984       868/962
(90 %)
25 diff
(97.5 %id)
ES310886 scalp interfollicular dermis, skin .a 38 to 354 1 to 317       317/317
(100 %)
2 diff
(99.4 %id)
BE275793 melanotic melanoma, skin .a 38 to 704 1 to 664       664/665
(99 %)
8 diff
(98.8 %id)
BM466267 embryonal carcinoma, cell line, testis .a 38 to 747 1 to 711       711/1157
(61 %)
10 diff
(99.2 %id)
BQ686296 ductal carcinoma, cell line, Pancreas .a 38 to 999 1 to 969       969/976
(99 %)
16 diff
(98.4 %id)
TI_57202631   .a 39 to 920 67 to 951       885/951
(93 %)
18 diff
(98.2 %id)
BM314003 insulinoma, Pancreas .a 40 to 642 7 to 609       603/609
(99 %)
0 diff
(100 %id)
BE277696 melanotic melanoma, skin .a 41 to 718 1 to 669       669/726
(92 %)
13 diff
(98.3 %id)
BE274128 melanotic melanoma, skin .a 41 to 655 1 to 613       613/667
(91 %)
4 diff
(99.5 %id)
BU527185 epidermoid carcinoma, cell line, lung .a 41 to 810 1 to 775       775/908
(85 %)
8 diff
(99.2 %id)
CN307087 embryonic stem cells, DMSO-treated H9 cellline .a 42 to 635 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BM557794 astrocytoma grade IV, cell line, brain .a 42 to 913 1 to 882       882/1000
(88 %)
16 diff
(98.4 %id)
BM907399 large cell carcinoma, lung .a 42 to 905 1 to 872       872/966
(90 %)
10 diff
(99.0 %id)
BF725276 eye, Iris .a 43 to 634 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BU528557 epidermoid carcinoma, cell line, lung .a 43 to 940 1 to 899       899/900
(99 %)
8 diff
(99.2 %id)
TI_57228920   .a 44 to 826 114 to 894       781/781
(100 %)
3 diff
(99.7 %id)
BI869857 adenocarcinoma, cell line, Liver .a 45 to 826 1 to 780       780/780
(100 %)
3 diff
(99.7 %id)
BQ939806 epidermoid carcinoma, cell line, lung .a 49 to 808 1 to 770       770/902
(85 %)
14 diff
(98.5 %id)
BQ937443 epidermoid carcinoma, cell line, lung .a 49 to 953 1 to 912       845/922
(91 %)
10 diff
(99.0 %id)
BU527273 epidermoid carcinoma, cell line, lung .a 49 to 903 1 to 863       863/883
(97 %)
11 diff
(98.8 %id)
BQ067118 pooled brain, lung, testis .a 50 to 997 1 to 958       958/1136
(84 %)
26 diff
(97.8 %id)
BF313456 brain, neuroblastoma .a 52 to 655 1 to 601       601/609
(98 %)
9 diff
(98.6 %id)
BE378950 endometrium, adenocarcinoma cell line, uterus .a 54 to 859 1 to 815       815/1162
(70 %)
23 diff
(98.1 %id)
DB041999 testis .a 54 to 632 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
BE622459 melanotic melanoma, skin .a 61 to 795 1 to 734       734/1051
(69 %)
14 diff
(98.7 %id)
BU855389 ovary, teratocarcinoma, cell line .a 72 to 903 1 to 838       838/926
(90 %)
19 diff
(98.0 %id)
TI_1948131940   .a 123 to 901 118 to 898       781/1340
(58 %)
15 diff
(98.9 %id)
TI_1948132273   .a 123 to 1011 117 to 1010       894/1306
(68 %)
38 diff
(97.1 %id)
TI_1948132576   .a 123 to 983 115 to 974       860/1305
(65 %)
18 diff
(98.7 %id)
TI_1948132885   .a 123 to 953 116 to 949       834/1294
(64 %)
15 diff
(98.9 %id)
EH338819   .a 129 to 193 1 to 64       64/66
(96 %)
2 diff
(97.0 %id)
TI_1948132577   .a 129 to 747 134 to 753       620/1233
(50 %)
32 diff
(97.5 %id)
TI_1948132886   .a 129 to 903 134 to 915       782/1171
(66 %)
33 diff
(97.2 %id)
CV027682 mixed .a 130 to 793 1 to 664       664/667
(99 %)
2 diff
(99.8 %id)
DB110028 thymus .a 136 to 718 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
TI_154188590   .a 146 to 898 123 to 875       753/941
(80 %)
32 diff
(96.6 %id)
BQ071487 brain, neuroblastoma, cell line .a 149 to 980 1 to 839       839/1060
(79 %)
7 diff
(99.4 %id)
CN307082 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 151 to 808 1 to 659       659/659
(100 %)
1 diff
(99.9 %id)
BM828476 Ascites, stomach .a 202 to 799 1 to 598       598/598
(100 %)
0 diff
(100 %id)
BM553631 duodenal adenocarcinoma, cell line, small intestine .a 207 to 1109 1 to 907   tiling clone,   907/1020
(88 %)
12 diff
(98.9 %id)
CB111573 Liver .a 259 to 881 1 to 623       623/623
(100 %)
0 diff
(100 %id)
TI_57241250   .a 266 to 1095 44 to 879       836/903
(92 %)
39 diff
(95.7 %id)
TI_151796177   .a 502 to 1108 79 to 689       611/854
(71 %)
21 diff
(97.6 %id)
TI_154138570   .a 509 to 1016 81 to 588       508/509
(99 %)
5 diff
(99.1 %id)
R58815   .a 562 to 776 1 to 214       214/215
(99 %)
17 diff
(92.1 %id)
BG026577 Bone, osteosarcoma, cell line .a 764 to 1409 1 to 649   tiling clone,   649/954
(68 %)
12 diff
(98.8 %id)
BF175190 blood .a 841 to 963 1 to 124       124/124
(100 %)
6 diff
(95.2 %id)
EH348294   .a 866 to 938 1 to 73       73/73
(100 %)
0 diff
(100 %id)
AA210896 germinal center B cell .a 920 to 1480 1 to 564   tiling clone,   564/564
(100 %)
8 diff
(98.6 %id)
BX338960 Placenta Cot 25-normalized .a 1462 to 2338 888 to 14       875/888
(98 %)
0 diff
(100 %id)
AW574864 lymph .a 1462 to 1983 539 to 18   tiling clone, AAA   522/522
(100 %)
0 diff
(100 %id)
TI_154110742   .a 1462 to 1983 589 to 63   AAA   527/866
(60 %)
7 diff
(99.2 %id)
TI_57197274   .a 1476 to 1984 31 to 539       509/1077
(47 %)
3 diff
(99.8 %id)
DB329471 Prostate .a 1491 to 1983 493 to 1       493/493
(100 %)
0 diff
(100 %id)
DB295074 adrenal gland .a 1501 to 2089 589 to 1       589/591
(99 %)
18 diff
(97.0 %id)
DB564386 hypothalamus .a 1529 to 1982 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AA210897 germinal center B cell .a 1530 to 1770 251 to 11       241/252
(95 %)
0 diff
(100 %id)
TI_151750139   .a 1537 to 1979 541 to 99   AAA   443/1320
(33 %)
2 diff
(99.9 %id)
DB535127 hippocampus .a 1547 to 1983 1 to 437     Submitted on the opposite strand 437/437
(100 %)
0 diff
(100 %id)
TI_57235342   .a 1631 to 1983 69 to 418   AAA   350/418
(83 %)
6 diff
(98.6 %id)
AI590625 ovary, tumor, 5 pooled (see description) .a 1693 to 2132 440 to 1       440/440
(100 %)
0 diff
(100 %id)
CN307088 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1743 to 2021 1 to 279       279/279
(100 %)
2 diff
(99.3 %id)
BG056562 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .a 1782 to 2152 382 to 10       373/382
(97 %)
0 diff
(100 %id)
BF870748 lung_tumor .a 1847 to 2243 1 to 397   tiling clone,   397/397
(100 %)
0 diff
(100 %id)
BF870969 lung_tumor .a 1847 to 2243 1 to 397       397/397
(100 %)
0 diff
(100 %id)
BF871034 lung_tumor .a 1847 to 2260 1 to 415       415/427
(97 %)
7 diff
(98.4 %id)
AA402252 ovarian tumor, ovary .a 1880 to 2123 1 to 241   fully sequenced,   241/241
(100 %)
6 diff
(97.6 %id)
AA477840 ovarian tumor, ovary .a 1881 to 2123 1 to 239       239/239
(100 %)
4 diff
(98.4 %id)
BG056753 anaplastic oligodendroglioma, brain .a 1896 to 2178 304 to 22   AAA   283/283
(100 %)
4 diff
(98.6 %id)
AU159508 thyroid gland .a 1906 to 2389 485 to 2       484/487
(99 %)
0 diff
(100 %id)
AA402927 ovarian tumor, ovary .a 1932 to 2127 193 to 1       193/193
(100 %)
3 diff
(98.5 %id)
AA402748 ovarian tumor, ovary .a 1943 to 2123 181 to 1   fully sequenced,   181/181
(100 %)
0 diff
(100 %id)
AA491179 germinal center B cell .a 2092 to 2488 1 to 398       398/398
(100 %)
2 diff
(99.5 %id)
EC467565 Prostate .a 2094 to 2218 1 to 127       127/127
(100 %)
2 diff
(98.5 %id)
EC540211 Prostate .a 2094 to 2218 1 to 126       126/126
(100 %)
1 diff
(99.3 %id)
EC553296 Prostate .a 2094 to 2218 1 to 123       123/123
(100 %)
2 diff
(98.4 %id)
DB543712.
matches multiple genes
hippocampus .a 2094 to 2535 442 to 1   tiling clone, also hits gene ZNF513 442/442
(100 %)
1 diff
(99.8 %id)
EC515504 Prostate .a 2095 to 2218 1 to 124       124/124
(100 %)
0 diff
(100 %id)
EC529800 Prostate .a 2095 to 2218 1 to 121       121/121
(100 %)
3 diff
(97.6 %id)
AA262847 germinal center B cell .a 2111 to 2497 1 to 391       391/391
(100 %)
8 diff
(98.0 %id)
AA689395 germinal center B cell .a 2154 to 2610 1 to 457       457/457
(100 %)
11 diff
(97.6 %id)
AW516822 cervix, tumor .a 2178 to 2341 164 to 1       164/164
(100 %)
1 diff
(99.4 %id)
W17082 lung .a 2183 to 2525 1 to 342       342/342
(100 %)
14 diff
(96.0 %id)
BE551223 carcinoid, lung .a 2251 to 2693 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AW579562 head_neck .a 2291 to 2806 26 to 545       520/557
(93 %)
21 diff
(96.3 %id)
BE145972 head_neck .a 2291 to 2806 11 to 525       515/537
(95 %)
5 diff
(99.1 %id)
BE146145 head_neck .a 2291 to 2806 4 to 520       517/534
(96 %)
8 diff
(98.6 %id)
AW382131 head_neck .a 2296 to 2827 28 to 560       533/560
(95 %)
6 diff
(99.0 %id)
BE706140 head_neck .a 2296 to 2698 32 to 442       411/442
(92 %)
6 diff
(98.7 %id)
BE146040 head_neck .a 2299 to 2806 21 to 527   tiling clone,   507/540
(93 %)
3 diff
(99.5 %id)
BF880490 lung_tumor .a 2301 to 2771 12 to 480       469/480
(97 %)
6 diff
(98.8 %id)
AW392394 stomach .a 2303 to 2848 1 to 544       544/544
(100 %)
3 diff
(99.5 %id)
BF736648 bladder_tumor .a 2315 to 2771 1 to 454       454/454
(100 %)
8 diff
(98.3 %id)
BE838600 prostate_normal .a 2335 to 2575 1 to 240       240/240
(100 %)
6 diff
(97.5 %id)
BE830963 marrow .a 2345 to 2575 1 to 230       230/230
(100 %)
7 diff
(97.0 %id)
BQ334500 marrow .a 2401 to 2677 1 to 277       277/277
(100 %)
2 diff
(99.3 %id)
BI052943 placenta_normal .a 2767 to 2895 1 to 129   tiling clone,   129/129
(100 %)
11 diff
(91.5 %id)
DC398842 testis .b 1 to 560 1 to 574   tiling clone,   574/574
(100 %)
15 diff
(97.4 %id)
DB177194 kidney, tumor tissue .b 390 to 939 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
D31764   .b 405 to 2447 1 to 2043 exact available from KIAA,   2043/2043
(100 %)
1 diff
(100.0 %id)
NM_014748.2   .b 405 to 2447 1 to 2043 exact RefSeq,   2043/2043
(100 %)
0 diff
(100 %id)
DA586117 lung .b 463 to 1056 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA730046   .b 463 to 1224 2 to 766   capped   765/765
(100 %)
5 diff
(99.4 %id)
TI_1540413002   .b 492 to 837 348 to 3       424/453
(93 %)
11 diff
(97.6 %id)
DA069397 cerebellum .b 493 to 1074 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB190349 lung, tumor tissue .b 493 to 1075 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
TI_1540413026   .b 493 to 844 357 to 7       389/460
(84 %)
12 diff
(97.4 %id)
AK129689 adrenal gland .b 495 to 2442 1 to 1948 exact tiling clone, available from FLJ,   1948/1948
(100 %)
0 diff
(100 %id)
AK222543 adipose tissue .b 496 to 2447 1 to 1952 M429V AAA   1952/1952
(100 %)
2 diff
(99.9 %id)
DA301406 hippocampus .b 496 to 1075 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA055814 cerebellum .b 497 to 1077 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA378779 thalamus .b 497 to 1124 2 to 629   capped   628/629
(99 %)
1 diff
(99.9 %id)
BP269207 thyroid .b 497 to 1077 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA025935   .b 498 to 1080 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
TI_1540412954   .b 498 to 840 351 to 9       343/513
(66 %)
0 diff
(100 %id)
TI_1540412978   .b 498 to 840 350 to 8       343/494
(69 %)
0 diff
(100 %id)
TI_1540413050   .b 498 to 844 347 to 1       347/608
(57 %)
2 diff
(99.7 %id)
TI_1540413074   .b 498 to 840 351 to 9       343/461
(74 %)
0 diff
(100 %id)
BJ994910 hepatoblastoma .b 502 to 1016 1 to 515       515/515
(100 %)
0 diff
(100 %id)
TI_57233565   .b 502 to 1330 16 to 842       827/843
(98 %)
17 diff
(98.0 %id)
TI_44172031   .b 502 to 1029 121 to 649       529/649
(81 %)
9 diff
(98.7 %id)
TI_57171108   .b 503 to 1307 32 to 836       805/837
(96 %)
15 diff
(98.3 %id)
TI_159676784   .b 503 to 1400 46 to 935       890/1052
(84 %)
16 diff
(98.5 %id)
TI_57151889   .b 505 to 1347 27 to 873       847/873
(97 %)
13 diff
(98.6 %id)
CR615965 Neuroblastoma Cot 25-normalized .b 506 to 2416 1 to 1911 exact     1911/1911
(100 %)
0 diff
(100 %id)
BM551979 melanotic melanoma, skin .b 509 to 1359 1 to 859       859/1064
(80 %)
16 diff
(98.5 %id)
DB493297 hypothalamus .b 510 to 1007 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
BU154815 melanotic melanoma, skin .b 510 to 1293 1 to 792       792/906
(87 %)
13 diff
(98.6 %id)
DA907997   .b 510 to 1304 2 to 797   capped   796/796
(100 %)
6 diff
(99.3 %id)
CR612997 Placenta Cot 25-normalized .b 511 to 2407 1 to 1897 exact     1897/1897
(100 %)
0 diff
(100 %id)
CR616594 T cells (Jurkat cell line) Cot10-normalized .b 511 to 2406 1 to 1896 exact     1896/1896
(100 %)
0 diff
(100 %id)
CR621161 B cells (Ramos cell line) Cot 25-normalized .b 511 to 2440 1 to 1930 exact     1930/1930
(100 %)
0 diff
(100 %id)
BI837922 pooled pancreas and spleen .b 511 to 1324 1 to 816       816/816
(100 %)
5 diff
(99.4 %id)
BQ959116 carcinoma, cell line, Prostate .b 511 to 1394 1 to 887       887/961
(92 %)
10 diff
(99.0 %id)
BU542896 carcinoma, cell line, Prostate .b 511 to 1334 1 to 827       827/873
(94 %)
5 diff
(99.5 %id)
CR992900 T-Lymphocytes .b 511 to 1316 1 to 807       807/809
(99 %)
2 diff
(99.8 %id)
CR593657 Placenta Cot 25-normalized .b 515 to 2409 1 to 1895 exact     1895/1895
(100 %)
0 diff
(100 %id)
BM698934 eye, fetal eyes .b 519 to 1076 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
BC050590 Testis, embryonal carcinoma .b 524 to 2449 1 to 1926 exact available from MGC, AAA   1926/1926
(100 %)
1 diff
(100.0 %id)
CX869577 embryonic stem .b 535 to 1296 1 to 762       762/762
(100 %)
0 diff
(100 %id)
CX869578 embryonic stem .b 535 to 1271 1 to 737       737/737
(100 %)
0 diff
(100 %id)
BM511506 insulinoma, Pancreas .b 537 to 1106 7 to 576       570/576
(98 %)
0 diff
(100 %id)
BM894391 insulinoma, Pancreas .b 537 to 1081 7 to 551       545/552
(98 %)
1 diff
(99.9 %id)
BQ549227 insulinoma, Pancreas .b 537 to 957 7 to 427       421/427
(98 %)
0 diff
(100 %id)
BQ787809 insulinoma, Pancreas .b 537 to 957 7 to 427       421/427
(98 %)
0 diff
(100 %id)
CR615476 Placenta Cot 25-normalized .b 556 to 2433 1 to 1878 exact     1878/1878
(100 %)
0 diff
(100 %id)
CR614181 Placenta Cot 25-normalized .b 593 to 2419 1 to 1827 exact     1827/1827
(100 %)
0 diff
(100 %id)
BT007167   .b 627 to 2038 1 to 1412       1412/1413
(99 %)
1 diff
(100.0 %id)
CR457081   .b 627 to 2039 1 to 1413 exact     1413/1413
(100 %)
1 diff
(100.0 %id)
CX869497 embryonic stem .b 1750 to 2447 723 to 26   AAA   698/698
(100 %)
1 diff
(99.9 %id)
BM669721 eye, fetal eyes .b 1764 to 2447 702 to 19   tiling clone, AAA   684/684
(100 %)
0 diff
(100 %id)
CX869498 embryonic stem .b 1814 to 2447 659 to 26   AAA   634/634
(100 %)
1 diff
(99.9 %id)
BQ787627 insulinoma, Pancreas .b 1818 to 2447 648 to 19   AAA   630/630
(100 %)
1 diff
(99.9 %id)
BQ549710 insulinoma, Pancreas .b 1833 to 2447 633 to 19   AAA   615/615
(100 %)
4 diff
(99.4 %id)
BM510668 insulinoma, Pancreas .b 1845 to 2447 622 to 20   AAA   603/603
(100 %)
1 diff
(99.9 %id)
BM894114 insulinoma, Pancreas .b 1872 to 2447 595 to 20   AAA   576/576
(100 %)
1 diff
(99.9 %id)
AK300144 placenta .c 1 to 1832 1 to 1832 exact tiling clone,   1832/1832
(100 %)
1 diff
(100.0 %id)
DC380058 placenta .c 1 to 478 1 to 479       479/479
(100 %)
2 diff
(99.6 %id)
AK298620   .d 1 to 2002 1 to 2002 exact tiling clone,   2002/2002
(100 %)
0 diff
(100 %id)
DC364873   .d 1 to 534 1 to 534       534/534
(100 %)
0 diff
(100 %id)
BI917101 brain .d 70 to 839 1 to 769       769/771
(99 %)
8 diff
(99.0 %id)
TI_57242389   .d 70 to 839 46 to 814       769/816
(94 %)
13 diff
(98.5 %id)
BQ477759 insulinoma, Pancreas .d 257 to 848 8 to 599       592/599
(98 %)
6 diff
(99.0 %id)
CD513126 brain, Pituitary .d 351 to 1152 1 to 808       808/852
(94 %)
8 diff
(99.1 %id)
BQ938205 leiomyosarcoma, uterus .d 436 to 1355 1 to 926       924/926
(99 %)
11 diff
(98.9 %id)
EB388434 eye, optic nerve .d 441 to 1239 1 to 799       799/799
(100 %)
0 diff
(100 %id)
BP295206   .d 490 to 1070 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BU855915 ovary, teratocarcinoma, cell line .d 574 to 1481 1 to 915       915/919
(99 %)
13 diff
(98.6 %id)
CB149371 Liver .d 579 to 1235 1 to 657       657/657
(100 %)
0 diff
(100 %id)
BM696495 eye, lens .d 579 to 1085 1 to 507       507/507
(100 %)
0 diff
(100 %id)
EB388600 eye, optic nerve .d 590 to 1380 1 to 791       791/791
(100 %)
0 diff
(100 %id)
TI_57230938   .d 597 to 1537 55 to 993       940/963
(97 %)
31 diff
(96.8 %id)
CX870183 embryonic stem .d 615 to 1366 1 to 752       752/752
(100 %)
0 diff
(100 %id)
TI_1948132579   .d 622 to 1495 999 to 127       873/1299
(67 %)
28 diff
(97.9 %id)
TI_59384313   .d 644 to 1330 62 to 749       688/688
(100 %)
1 diff
(99.9 %id)
TI_57228446   .d 648 to 1534 53 to 946       894/955
(93 %)
9 diff
(99.1 %id)
BI870711 adenocarcinoma, cell line, Liver .d 649 to 1534 1 to 893       893/954
(93 %)
9 diff
(99.1 %id)
BM016095 breast, mammary adenocarcinoma, cell line .d 664 to 1370 1 to 707       707/707
(100 %)
0 diff
(100 %id)
TI_59394479   .d 664 to 1370 95 to 801       707/707
(100 %)
0 diff
(100 %id)
BG762676 melanotic melanoma, high MDR (cell line), skin .d 684 to 1383 1 to 700       700/700
(100 %)
0 diff
(100 %id)
BG031423 breast, mammary adenocarcinoma, cell line .d 688 to 1505 1 to 819       775/876
(88 %)
24 diff
(97.3 %id)
BG748254 eye, normal pigmented retinal epithelium .d 741 to 1371 1 to 631       631/631
(100 %)
0 diff
(100 %id)
BG750535 eye, normal pigmented retinal epithelium .d 741 to 1398 1 to 657       657/657
(100 %)
1 diff
(99.9 %id)
BG749956 eye, normal pigmented retinal epithelium .d 741 to 1643 1 to 906       906/907
(99 %)
25 diff
(97.3 %id)
TI_1948132276   .d 763 to 1495 865 to 129       737/1321
(55 %)
17 diff
(98.8 %id)
TI_1948131942   .d 765 to 1495 860 to 124       735/1365
(53 %)
30 diff
(97.9 %id)
BG678976 skin, squamous cell carcinoma .d 798 to 1506 1 to 709       709/710
(99 %)
1 diff
(99.9 %id)
CV572824 cornea, eye .d 806 to 1385 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BQ684126 melanotic melanoma, cell line, skin .d 816 to 1584 13 to 789       777/940
(82 %)
17 diff
(98.2 %id)
TI_1948131943   .d 856 to 1495 776 to 128       649/1359
(47 %)
36 diff
(97.4 %id)
TI_154189707   .d 857 to 1695 49 to 875   AAA   827/970
(85 %)
24 diff
(97.6 %id)
TI_1948132578   .d 858 to 1495 776 to 136       641/1350
(47 %)
19 diff
(98.6 %id)
TI_57162396   .d 876 to 1796 1 to 933       933/933
(100 %)
25 diff
(97.4 %id)
CB164393 Liver .d 915 to 1506 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BQ671570 epidermoid carcinoma, cell line, salivary gland .d 940 to 1872 1 to 935       935/936
(99 %)
16 diff
(98.3 %id)
TI_154109473   .d 987 to 1900 985 to 88   AAA   898/993
(90 %)
19 diff
(98.1 %id)
TI_1948132888   .d 1051 to 1902 913 to 63       851/1281
(66 %)
13 diff
(99.0 %id)
TI_1948132887   .d 1052 to 1902 900 to 46       855/1328
(64 %)
28 diff
(97.9 %id)
BE281325 choriocarcinoma, placenta .d 1055 to 1763 28 to 732       705/746
(94 %)
7 diff
(99.1 %id)
TI_154105558   .d 1058 to 1904 913 to 80   AAA   834/949
(87 %)
22 diff
(97.7 %id)
TI_149310792   .d 1063 to 1904 947 to 114   AAA   834/930
(89 %)
14 diff
(98.5 %id)
TI_151746108   .d 1064 to 1904 938 to 89   AAA   850/994
(85 %)
35 diff
(96.5 %id)
TI_154125981   .d 1066 to 1904 912 to 85   AAA   828/978
(84 %)
14 diff
(98.6 %id)
BM561695 blood, natural killer cells, cell line .d 1067 to 1904 1 to 838   AAA   838/838
(100 %)
4 diff
(99.6 %id)
TI_149302954   .d 1069 to 1904 890 to 65   AAA   826/949
(87 %)
13 diff
(98.7 %id)
TI_159696777   .d 1072 to 1904 887 to 61   AAA   827/1028
(80 %)
18 diff
(98.3 %id)
CR983394 T-Lymphocytes .d 1088 to 1770 1 to 682       682/682
(100 %)
1 diff
(99.9 %id)
BE888188 leiomyosarcoma, uterus .d 1091 to 1736 1 to 646       646/648
(99 %)
1 diff
(99.9 %id)
TI_227713554   .d 1097 to 1900 866 to 71   AAA   796/986
(80 %)
10 diff
(99.0 %id)
TI_154101336   .d 1100 to 1904 890 to 85   AAA   806/813
(99 %)
22 diff
(97.3 %id)
CB851009 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 1100 to 1904 817 to 19   AAA   799/804
(99 %)
6 diff
(99.3 %id)
TI_154062760   .d 1101 to 1900 882 to 90   AAA   793/944
(84 %)
9 diff
(99.1 %id)
TI_149290380   .d 1126 to 1904 854 to 86   AAA   769/776
(99 %)
20 diff
(97.5 %id)
EC532264 Prostate .d 1136 to 1216 1 to 85       83/89
(93 %)
7 diff
(92.2 %id)
EC459596 Prostate .d 1138 to 1221 1 to 86       84/86
(97 %)
1 diff
(98.9 %id)
CB529443 Aveolar Macrophage, lung .d 1142 to 1900 776 to 19   AAA   758/758
(100 %)
3 diff
(99.7 %id)
TI_154132268   .d 1154 to 1904 858 to 104   AAA   753/758
(99 %)
32 diff
(95.8 %id)
BU631661 cell lines, Chondrosarcoma .d 1160 to 1904 762 to 19   AAA   744/744
(100 %)
2 diff
(99.8 %id)
TI_154176565   .d 1185 to 1731 80 to 625       546/546
(100 %)
8 diff
(98.6 %id)
TI_154176625   .d 1185 to 1728 80 to 629       550/1048
(52 %)
11 diff
(99.0 %id)
CA447928 Chondrosarcoma, Left Pelvis .d 1190 to 1900 729 to 19   AAA   711/711
(100 %)
1 diff
(99.9 %id)
BM989803 lung, Lung Focal Fibrosis .d 1191 to 1900 728 to 19   AAA   710/710
(100 %)
2 diff
(99.8 %id)
CR607260 Neuroblastoma Cot 25-normalized .d 1198 to 1905 1 to 708       708/708
(100 %)
0 diff
(100 %id)
TI_43961604   .d 1212 to 1822 658 to 4       626/1297
(48 %)
38 diff
(97.1 %id)
TI_149290000   .d 1212 to 1904 793 to 104   AAA   690/691
(99 %)
6 diff
(99.2 %id)
BQ477345 insulinoma, Pancreas .d 1242 to 1904 681 to 19   AAA   663/663
(100 %)
0 diff
(100 %id)
BM686002 eye, Retina Foveal and Macular .d 1242 to 1827 1 to 584       584/584
(100 %)
6 diff
(99.0 %id)
BF981412 duodenal adenocarcinoma, cell line, small intestine .d 1257 to 2025 1 to 759       759/787
(96 %)
19 diff
(97.6 %id)
BE622761 melanotic melanoma, skin .d 1264 to 2066 841 to 12   tiling clone,   826/841
(98 %)
15 diff
(98.3 %id)
TI_154135741   .d 1264 to 1904 727 to 88   AAA   640/877
(72 %)
8 diff
(99.1 %id)
BI711442 insulinoma, Pancreas .d 1291 to 1904 629 to 16   AAA   614/615
(99 %)
0 diff
(100 %id)
BQ003331 Chondrosarcoma, Left Pelvis .d 1297 to 1904 626 to 19   AAA   608/608
(100 %)
0 diff
(100 %id)
BM710397 eye, optic nerve .d 1331 to 1807 1 to 477       477/477
(100 %)
3 diff
(99.4 %id)
BU506495 mixed (pool of 40 RNAs) .d 1362 to 2076 1 to 721   tiling clone,   717/831
(86 %)
20 diff
(97.6 %id)
BU735115 eye, lens .d 1536 to 1904 385 to 17   AAA   369/369
(100 %)
3 diff
(99.2 %id)
DC345269 colon .e 1 to 511 1 to 511   tiling clone,   511/511
(100 %)
1 diff
(99.9 %id)
DC345293 colon .e 1 to 576 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
DC337011 substantia nigra .e 7 to 569 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
DC339332 subthalamic nucleus .e 9 to 574 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
AK298869   .e 22 to 1473 1 to 1452 exact tiling clone,   1452/1452
(100 %)
2 diff
(99.9 %id)
DC366610   .e 22 to 598 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
BQ926734 epidermoid carcinoma, cell line, lung .e 29 to 998 1 to 983       983/992
(99 %)
29 diff
(97.1 %id)
BU528890 epidermoid carcinoma, cell line, lung .e 29 to 813 1 to 790       790/884
(89 %)
10 diff
(98.9 %id)
DC348555   .f 1 to 563 1 to 563   tiling clone,   563/563
(100 %)
0 diff
(100 %id)
AK297054 cord Blood .f 9 to 1807 1 to 1799 exact tiling clone,   1799/1799
(100 %)
0 diff
(100 %id)
DC297236   .f 9 to 580 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
DC314256 amygdala .f 10 to 515 1 to 506       506/506
(100 %)
1 diff
(99.9 %id)
DC359169 lung .f 12 to 579 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC388850 small intestine .f 12 to 576 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC304856 cerebellum .f 14 to 578 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
DC314369 amygdala .f 17 to 579 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
DC420638 uterus .f 17 to 584 1 to 568       568/569
(99 %)
1 diff
(99.9 %id)
DC381227 placenta .f 31 to 586 1 to 556       556/556
(100 %)
3 diff
(99.5 %id)
DC339917 thalamus .f 35 to 481 1 to 448       448/453
(98 %)
3 diff
(99.4 %id)
TI_159677130   .f 47 to 1012 49 to 1004       957/1084
(88 %)
25 diff
(97.7 %id)
CF131524 Chondrosarcoma Lung Metastasis cell lines, lung .f 48 to 772 1 to 725       725/725
(100 %)
1 diff
(99.9 %id)
CN307078 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 80 to 761 1 to 683       683/683
(100 %)
1 diff
(99.9 %id)
AK316373 testis .g 1 to 1844 1 to 1844 E339G tiling clone,   1844/1844
(100 %)
2 diff
(99.9 %id)
DC395134 testis .g 1 to 546 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
DC337174 substantia nigra .h 1 to 566 1 to 566   tiling clone,   566/566
(100 %)
0 diff
(100 %id)
BP379910 uterus .h 6 to 587 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
DC326576 caudate nucleus .h 12 to 577 1 to 566       566/566
(100 %)
0 diff
(100 %id)
AK308487   .h 14 to 1968 1 to 1955 exact tiling clone,   1955/1955
(100 %)
2 diff
(99.9 %id)
DC299402   .h 14 to 582 1 to 569       569/569
(100 %)
0 diff
(100 %id)
AK307122 caudate nucleus .h 17 to 932 1 to 916       916/916
(100 %)
1 diff
(99.9 %id)
DC326540 caudate nucleus .h 17 to 580 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC383119 Prostate .h 17 to 557 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
BI752744 brain .h 24 to 656 1 to 659       570/662
(86 %)
45 diff
(93.3 %id)
TI_57219582   .h 24 to 656 33 to 691       570/694
(82 %)
36 diff
(94.9 %id)
CF146051 CNCAP(3)T-225 cell line, Prostate .h 31 to 467 1 to 502       502/502
(100 %)
5 diff
(99.1 %id)
TI_154178422   .h 38 to 574 91 to 693       603/605
(99 %)
7 diff
(98.9 %id)
BF317391 brain, neuroblastoma .h 51 to 823 1 to 767       767/900
(85 %)
21 diff
(97.7 %id)
BI197608 brain, neuroblastoma .h 51 to 828 1 to 786       785/874
(89 %)
17 diff
(98.1 %id)
DC426504 Prostate .h 1450 to 1968 522 to 1   tiling clone,   522/542
(96 %)
5 diff
(99.1 %id)
AK298856   .i 1 to 1906 1 to 1906 S59P tiling clone,   1906/1906
(100 %)
2 diff
(99.9 %id)
DC337598 substantia nigra .i 1 to 588 1 to 588       588/592
(99 %)
1 diff
(99.9 %id)
DC366374   .i 1 to 517 1 to 516       516/516
(100 %)
0 diff
(100 %id)
DC305670 cerebellum .i 6 to 544 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
TI_57147100   .i 8 to 766 25 to 791       767/801
(95 %)
11 diff
(98.7 %id)
BI761363 pooled colon, kidney, stomach .i 19 to 766 1 to 756   tiling clone,   756/766
(98 %)
13 diff
(98.4 %id)
AK293252   .j 1 to 1987 1 to 1987 exact tiling clone,   1987/1987
(100 %)
3 diff
(99.9 %id)
DC299401   .j 1 to 569 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
AK295278 caudate nucleus .k 1 to 1567 1 to 1567 exact tiling clone,   1567/1567
(100 %)
1 diff
(100.0 %id)
DC326906 caudate nucleus .k 1 to 560 1 to 560       560/560
(100 %)
0 diff
(100 %id)
AK300641 rectum .k 7 to 1433 1 to 1425 V17S A18C A19K K20A L21G ... tiling clone,   1425/1425
(100 %)
6 diff
(99.6 %id)
DC385369 rectum .k 7 to 583 1 to 575       575/575
(100 %)
6 diff
(99.0 %id)
BP195325 brain .k 16 to 597 1 to 583       583/583
(100 %)
9 diff
(98.5 %id)
BI088250 cervix .l 1 to 736 1 to 734   tiling clone,   734/734
(100 %)
2 diff
(99.8 %id)
BF307350 muscle, rhabdomyosarcoma .l 8 to 684 1 to 672   tiling clone,   670/916
(73 %)
33 diff
(96.4 %id)
BF182862 large cell carcinoma, lung .l 9 to 695 1 to 686       686/899
(76 %)
14 diff
(98.5 %id)
BQ669739 epidermoid carcinoma, cell line, salivary gland .l 69 to 776 1 to 707   tiling clone,   707/911
(77 %)
4 diff
(99.6 %id)
AL047686 uterus .l 685 to 1370 1 to 687   tiling clone,   687/687
(100 %)
1 diff
(99.9 %id)
BQ877320 ductal carcinoma, cell line, Pancreas .l 1190 to 1913 38 to 762   tiling clone,   725/918
(78 %)
12 diff
(98.7 %id)
AI760701 B-cell, chronic lymphotic leukemia .l 1224 to 1710 483 to 1       483/483
(100 %)
43 diff
(91.1 %id)
DB029853 testis .m 1 to 595 2 to 596   tiling clone, capped   595/595
(100 %)
0 diff
(100 %id)
BP379371 uterus .m 38 to 591 1 to 553       553/553
(100 %)
4 diff
(99.3 %id)
DA259406 caudate nucleus .m 39 to 582 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB032395 testis .m 39 to 626 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
BP341199 stomach mucosa .m 41 to 623 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA528095 brain .m 42 to 643 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA876290 Prostate .m 42 to 603 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA946195 Spleen .m 42 to 592 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BG437427 large cell carcinoma, lung .m 48 to 807 1 to 771   available from MGC,   771/771
(100 %)
22 diff
(97.2 %id)
BC021108 Lung, large cell carcinoma .m 49 to 2055 1 to 2007   tiling clone, available from MGC, AAA   2007/2007
(100 %)
0 diff
(100 %id)
DA263252 caudate nucleus .m 56 to 623 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BQ224277 large cell carcinoma, lung .m 69 to 917 1 to 860       860/882
(97 %)
15 diff
(98.3 %id)
TI_57165288   .n 1 to 693 28 to 720   tiling clone,   693/720
(96 %)
6 diff
(99.2 %id)
BI837728 pooled pancreas and spleen .n 5 to 693 1 to 688   available from MGC,   688/688
(100 %)
1 diff
(99.9 %id)
BC032320 Pancreas, Spleen, adult pooled .n 9 to 1645 1 to 1637 exact tiling clone, available from MGC, AAA   1637/1637
(100 %)
2 diff
(99.9 %id)
BM709362 eye, optic nerve .n 232 to 706 1 to 475       475/475
(100 %)
0 diff
(100 %id)
TI_59390433   .o 1 to 708 96 to 820 V27C N28E G29W V30S L31P ... tiling clone,   707/817
(86 %)
30 diff
(96.4 %id)
DC386019   .p 1 to 659 1 to 660 E55K E155X D170N R173P G174W ... tiling clone,   660/749
(88 %)
11 diff
(98.6 %id)
BJ991231 hepatoblastoma .q 1 to 584 1 to 585   tiling clone,   585/585
(100 %)
1 diff
(99.9 %id)
BP367052 thymus .q 541 to 1123 1 to 582   tiling clone,   582/585
(99 %)
2 diff
(99.7 %id)
DA373398 thalamus .r 1 to 548 2 to 549 exact tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
DA372073 thalamus .s 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
1 diff
(99.9 %id)
BP257785 heart .t 1 to 577 1 to 577 exact tiling clone,   581/581
(100 %)
0 diff
(100 %id)
DA915877 small intestine .u 1 to 514 7 to 520 E9G K62E capped   519/519
(100 %)
2 diff
(99.7 %id)
DA298466 hippocampus .u 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
DA411280 thalamus .u 16 to 471 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
BG740079 skin .u 26 to 768 1 to 743 exact     743/745
(99 %)
3 diff
(99.6 %id)
DA085041 cerebellum .u 321 to 874 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP346313 synovial membrane .u 520 to 1098 1 to 579   tiling clone,   579/579
(100 %)
0 diff
(100 %id)
DA265744 caudate nucleus .va 1 to 481 2 to 482 exact tiling clone, capped   481/481
(100 %)
0 diff
(100 %id)
DC302919 cerebellum .vb 1 to 556 1 to 556 exact tiling clone,   556/556
(100 %)
0 diff
(100 %id)
DC311936 alzheimer cortex .vb 17 to 629 1 to 613 exact     613/613
(100 %)
0 diff
(100 %id)
BP212283 cerebrum .vb 17 to 596 1 to 579 exact     579/579
(100 %)
1 diff
(99.9 %id)
BP360967 thalamus .vb 17 to 597 1 to 582 exact     582/582
(100 %)
5 diff
(99.2 %id)
BP374947 umbilical cord .vb 17 to 600 1 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
DC315717 amygdala .vb 19 to 574 1 to 556 exact     556/556
(100 %)
0 diff
(100 %id)
DC386998   .vb 19 to 563 1 to 546 exact     546/546
(100 %)
1 diff
(99.9 %id)
DC421904 uterus .vb 19 to 557 1 to 539 exact     539/539
(100 %)
0 diff
(100 %id)
DC340215 thalamus .vb 22 to 576 1 to 555 exact     555/555
(100 %)
0 diff
(100 %id)
BP271694   .vb 22 to 638 1 to 616 exact     616/616
(100 %)
10 diff
(98.4 %id)
DC391681 Spleen .vb 22 to 578 1 to 557 exact     557/557
(100 %)
0 diff
(100 %id)
BP196953 adrenal gland .vb 23 to 603 1 to 578 exact     578/582
(99 %)
8 diff
(98.7 %id)
DB336851 testis .vb 544 to 1100 1 to 558   tiling clone, Submitted on the opposite strand 558/558
(100 %)
3 diff
(99.5 %id)
BI023563 marrow .vc 1 to 320 37 to 358 Q27G tiling clone,   322/358
(89 %)
7 diff
(98.1 %id)
AK309640   .vd 1 to 966 1 to 966 L53S tiling clone,   966/966
(100 %)
1 diff
(99.9 %id)
DA675299   .vd 2 to 583 2 to 583 L53S capped   582/582
(100 %)
1 diff
(99.9 %id)
R94595 liver and spleen .ve-u 1 to 339 1 to 339 G9E G31X tiling clone,   339/339
(100 %)
1 diff
(99.8 %id)
AA776939   .ve-u 328 to 850 521 to 1   tiling clone,   521/521
(100 %)
8 diff
(98.5 %id)
R94596 liver and spleen .ve-u 613 to 866 254 to 1   tiling clone,   254/254
(100 %)
2 diff
(99.3 %id)
DC334406 hippocampus .vf 1 to 561 1 to 561 exact tiling clone,   561/561
(100 %)
1 diff
(99.9 %id)
DC409041 thymus .vf 1 to 568 1 to 569 exact     569/569
(100 %)
3 diff
(99.5 %id)
DC423145 uterus .vf 6 to 554 1 to 550 G13X D14G S15Q G16R G17R ...     550/550
(100 %)
1 diff
(99.9 %id)
DC410961 thymus .vf 8 to 589 1 to 582 exact     582/582
(100 %)
1 diff
(99.9 %id)
DC376608 brain .vf 21 to 589 1 to 568 exact     568/568
(100 %)
3 diff
(99.5 %id)
DC428563   .vf 22 to 567 1 to 546 exact     546/546
(100 %)
0 diff
(100 %id)
DC417946 trachea .vf 22 to 615 1 to 594 exact tiling clone,   594/594
(100 %)
1 diff
(99.9 %id)
DC347905 tongue, tumor tissue .vf 26 to 548 9 to 531 exact     523/523
(100 %)
0 diff
(100 %id)
BE545019 cervical carcinoma cell line, cervix .vg 1 to 612 9 to 627 P19R C20A R21V A22R V23R ... tiling clone,   627/627
(100 %)
18 diff
(97.2 %id)
BE311881 Kidney, renal cell adenocarcinoma .vh 1 to 579 44 to 624 G2W tiling clone,   581/748
(77 %)
14 diff
(98.2 %id)
DC327027 caudate nucleus .vh 37 to 589 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
BF516482   .vh 53 to 594 560 to 19   tiling clone, AAA   542/574
(94 %)
1 diff
(99.9 %id)
BF820312 kidney_tumor .vi-u 1 to 576 575 to 1 exact tiling clone, Submitted on the opposite strand 575/582
(98 %)
7 diff
(98.8 %id)
BQ348468 head_neck .vi-u 1 to 399 16 to 416 K23Q     401/426
(94 %)
8 diff
(98.2 %id)
DA246097 brain .vi-u 30 to 593 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
BG012242 placenta_normal .vj-u 1 to 458 459 to 3   tiling clone,   457/459
(99 %)
0 diff
(100 %id)
BG012239 placenta_normal .vj-u 7 to 454 452 to 4       449/458
(98 %)
0 diff
(100 %id)
BG012241 placenta_normal .vj-u 7 to 454 450 to 6   tiling clone,   445/490
(90 %)
0 diff
(100 %id)
AW627986 pooled .vj-u 208 to 556 1 to 349 E4K W79G tiling clone, Submitted on the opposite strand 349/349
(100 %)
9 diff
(97.5 %id)
AK293464 cerebellum Gene SNX17, variant not shown         Suspected internal deletion, this clone was ignored    
BQ312497 breast_normal Gene SNX17, variant not shown              
DC302382 cerebellum Gene SNX17, variant not shown         Suspected internal deletion, this clone was ignored    
DA340365 hippocampus Gene SNX17, variant not shown       capped      
DC339987 thalamus Gene SNX17, variant not shown         Suspected internal deletion, this clone was ignored    
CN268263 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene SNX17, variant not shown              
DB237804 trachea Gene SNX17, variant not shown       capped      
DB350421 trachea Gene SNX17, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve-u, .vf, .vg, .vh, .vi-u, .vj-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI