To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SNTA1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
271 supporting clones for gene SNTA1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AL560894 B cells from Burkitt lymphoma .a 1 to 709 7 to 716       716/786
(91 %)
33 diff
(95.9 %id)
AU118614 whole embryo, mainly head .a 1 to 724 2 to 719   tiling clone, capped   718/741
(96 %)
12 diff
(98.4 %id)
NM_003098.2   .a 2 to 2346 1 to 2345 exact RefSeq,   2345/2345
(100 %)
4 diff
(99.9 %id)
BQ947079 epidermoid carcinoma, cell line, lung .a 24 to 637 1 to 615       615/1029
(59 %)
9 diff
(99.2 %id)
CD557298 testis .a 27 to 771 1 to 748       748/933
(80 %)
19 diff
(98.0 %id)
CA392810 eye, RPE/choroid .a 36 to 577 1 to 542       542/542
(100 %)
0 diff
(100 %id)
CD245088 White Matter .a 129 to 834 1 to 709       709/901
(78 %)
10 diff
(98.9 %id)
AK291994 small intestine .a 131 to 2124 1 to 1994 exact     1994/1994
(100 %)
0 diff
(100 %id)
DB478825 hippocampus .a 131 to 623 1 to 493       493/493
(100 %)
4 diff
(99.2 %id)
DA926996 small intestine .a 132 to 528 2 to 398   capped   397/397
(100 %)
1 diff
(99.8 %id)
AL550070 placenta, Placenta Cot 25-normalized .a 144 to 1180 1 to 1030       1030/1030
(100 %)
8 diff
(99.3 %id)
S81737   .a 146 to 1899 7 to 1759 R6P G25A L32P L33V G66D     1753/1771
(98 %)
21 diff
(98.9 %id)
AL559118 T cells from T cell leukemia .a 150 to 1013 1 to 864       864/864
(100 %)
43 diff
(95.1 %id)
AL525888 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 152 to 1165 1 to 1005       1005/1005
(100 %)
11 diff
(99.0 %id)
AL517821 brain, neuroblastoma, neuroblastoma cells .a 153 to 1182 1 to 1014       1014/1025
(98 %)
24 diff
(97.7 %id)
AL528602 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 153 to 1179 1 to 1019       1019/1019
(100 %)
15 diff
(98.6 %id)
BG034950 adenocarcinoma, cell line, Liver .a 159 to 774 9 to 623       615/1010
(60 %)
15 diff
(98.6 %id)
BX333849 Neuroblastoma Cot 50-normalized .a 160 to 977 1 to 815       815/815
(100 %)
10 diff
(98.8 %id)
CR978551 T-Lymphocytes .a 160 to 629 1 to 470       470/474
(99 %)
1 diff
(99.8 %id)
BQ880393 dorsal root ganglia .a 161 to 538 1 to 378       378/1174
(32 %)
7 diff
(99.5 %id)
BC026215 Liver, adenocarcinoma .a 162 to 2334 1 to 2173 exact available from MGC, AAA   2173/2173
(100 %)
0 diff
(100 %id)
CR977036 T-Lymphocytes .a 167 to 513 1 to 347       347/347
(100 %)
1 diff
(99.8 %id)
BX345869 Placenta Cot 25-normalized .a 186 to 1039 1 to 856       856/856
(100 %)
23 diff
(97.4 %id)
AL524778 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 193 to 1180 1 to 980       980/992
(98 %)
11 diff
(98.9 %id)
BI822482 pooled brain, lung, testis .a 200 to 846 1 to 652       652/652
(100 %)
12 diff
(98.2 %id)
TI_57200405   .a 200 to 846 30 to 681       652/681
(95 %)
11 diff
(98.4 %id)
BM547446 ovary (pool of 3) .a 202 to 978 1 to 784       784/1081
(72 %)
12 diff
(98.9 %id)
BM544592 brain, hippocampus .a 202 to 869 1 to 673       673/1168
(57 %)
15 diff
(98.8 %id)
CN263450 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 203 to 368 1 to 168       168/168
(100 %)
3 diff
(98.3 %id)
BM463706 leiomyosarcoma, uterus .a 206 to 745 1 to 541       541/1191
(45 %)
9 diff
(99.3 %id)
BG697320 skin .a 224 to 1074 1 to 866       863/866
(99 %)
31 diff
(96.5 %id)
DN990168 brain, whole brain .a 230 to 813 9 to 592       584/592
(98 %)
6 diff
(99.0 %id)
DB482938 hippocampus .a 237 to 733 1 to 496       496/496
(100 %)
10 diff
(98.0 %id)
U40571   .a 237 to 2340 1 to 2104 exact tiling clone,   2104/2110
(99 %)
1 diff
(100.0 %id)
BI829434 brain, medulla .a 259 to 946 1 to 694       694/723
(95 %)
23 diff
(96.9 %id)
TI_57176874   .a 259 to 946 61 to 754       694/783
(88 %)
27 diff
(96.6 %id)
DC395371 testis .a 271 to 782 1 to 512       512/512
(100 %)
0 diff
(100 %id)
BU509051 leiomyosarcoma, uterus .a 289 to 972 1 to 689       689/960
(71 %)
11 diff
(98.9 %id)
BM552329 leiomyosarcoma, uterus .a 403 to 1178 1 to 780       780/1042
(74 %)
20 diff
(98.1 %id)
DA263369 caudate nucleus .a 457 to 1017 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
CR593272 Neuroblastoma Cot 50-normalized .a 481 to 2311 1 to 1831       1831/1831
(100 %)
0 diff
(100 %id)
BX355201 Neuroblastoma Cot 50-normalized .a 486 to 1306 8 to 839       829/839
(98 %)
87 diff
(89.7 %id)
BX386970 Neuroblastoma Cot 50-normalized .a 486 to 1506 8 to 1018       1011/1024
(98 %)
30 diff
(97.1 %id)
AA092418   .a 587 to 863 1 to 271       271/271
(100 %)
9 diff
(96.7 %id)
BU528944 epidermoid carcinoma, cell line, lung .a 591 to 1081 1 to 499       499/1209
(41 %)
15 diff
(98.8 %id)
DA559586 heart .a 613 to 1177 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BI868374 adenocarcinoma, cell line, Liver .a 621 to 1263 25 to 667       643/667
(96 %)
10 diff
(98.6 %id)
TI_57228031   .a 621 to 1263 79 to 721       643/667
(96 %)
10 diff
(98.6 %id)
BM688120 eye, human retina .a 630 to 840 9 to 219       211/219
(96 %)
6 diff
(97.3 %id)
BM690955 eye, RPE and Choroid .a 688 to 1254 1 to 566       566/566
(100 %)
4 diff
(99.3 %id)
BI084296 epidermoid carcinoma, cell line, salivary gland .a 732 to 1182 1 to 459       459/522
(87 %)
14 diff
(97.4 %id)
BI060185 uterus_tumor .a 762 to 1112 350 to 1       350/356
(98 %)
5 diff
(98.6 %id)
BP267001 thyroid .a 776 to 1345 1 to 569       569/571
(99 %)
3 diff
(99.5 %id)
BF339225 brain, glioblastoma with EGFR amplification .a 780 to 1452 1 to 672       672/672
(100 %)
16 diff
(97.7 %id)
DA358298 subthalamic nucleus .a 784 to 1337 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
BM824585 Ascites, stomach .a 794 to 1184 1 to 392       392/392
(100 %)
1 diff
(99.8 %id)
TI_154170947   .a 811 to 1510 87 to 786       700/860
(81 %)
15 diff
(98.3 %id)
TI_154171046   .a 811 to 1509 93 to 802       710/1108
(64 %)
35 diff
(96.9 %id)
CF140473 CNCAP(3)T-225 cell line, Prostate .a 814 to 1403 11 to 600       590/600
(98 %)
8 diff
(98.7 %id)
CF140544 CNCAP(3)T-225 cell line, Prostate .a 814 to 1313 11 to 510       500/521
(95 %)
14 diff
(97.4 %id)
CD514526 White Matter .a 842 to 1634 1 to 803       803/865
(92 %)
25 diff
(97.2 %id)
BC113813 PCR rescued clones .a 855 to 1490 1 to 637       637/639
(99 %)
11 diff
(98.3 %id)
BM822043 stomach .a 919 to 1115 1 to 197       197/197
(100 %)
1 diff
(99.5 %id)
BG250068 adenocarcinoma, cell line, Liver .a 931 to 1587 5 to 660       656/660
(99 %)
7 diff
(99.0 %id)
BF568623 epithelioid carcinoma cell line, Pancreas .a 936 to 1627 1 to 689   fully sequenced,   689/689
(100 %)
6 diff
(99.2 %id)
CF147259 CNCAP(3)T-225 cell line, Prostate .a 937 to 1187 1 to 251       251/253
(99 %)
18 diff
(92.9 %id)
CF146928 CNCAP(3)T-225 cell line, Prostate .a 937 to 1619 1 to 680       680/683
(99 %)
9 diff
(98.7 %id)
TI_57168469   .a 938 to 1570 35 to 674       640/873
(73 %)
21 diff
(97.6 %id)
BI832922 pooled pancreas and spleen .a 939 to 1570 1 to 639       639/838
(76 %)
15 diff
(98.3 %id)
TI_154179862   .a 944 to 1808 77 to 935       859/859
(100 %)
30 diff
(96.6 %id)
BM708591 eye, RPE and Choroid .a 944 to 1432 1 to 489       489/489
(100 %)
0 diff
(100 %id)
TI_154179469   .a 945 to 1770 70 to 892       823/824
(99 %)
21 diff
(97.5 %id)
CB154489 brain .a 948 to 1480 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
BE792107 lung, small cell carcinoma .a 951 to 1698 1 to 745       745/988
(75 %)
10 diff
(99.0 %id)
BE737092 adenocarcinoma, Pancreas .a 972 to 1747 86 to 869       788/1046
(75 %)
39 diff
(96.3 %id)
BE737535 adenocarcinoma, Pancreas .a 972 to 1738 40 to 816       781/1029
(75 %)
55 diff
(94.7 %id)
H09454 whole brain .a 1001 to 1313 1 to 312       312/433
(72 %)
8 diff
(98.2 %id)
BE562959 endometrium, adenocarcinoma cell line, uterus .a 1020 to 1673 1 to 653       653/654
(99 %)
2 diff
(99.7 %id)
H12247 whole brain .a 1024 to 1515 1 to 499     Submitted on the opposite strand 499/538
(92 %)
29 diff
(94.7 %id)
BE700872 nervous_normal .a 1064 to 1267 117 to 320       204/320
(63 %)
6 diff
(98.2 %id)
BF837870 head_neck .a 1065 to 1626 19 to 581       563/581
(96 %)
10 diff
(98.3 %id)
BF836262 head_neck .a 1066 to 1389 1 to 324       324/324
(100 %)
4 diff
(98.8 %id)
BF836247 head_neck .a 1068 to 1604 1 to 534       534/534
(100 %)
13 diff
(97.6 %id)
C03821 heart .a 1079 to 1362 57 to 343       287/346
(82 %)
6 diff
(98.3 %id)
BF664010 B-cells, primary B-cells from tonsils (cell line) .a 1102 to 1849 1 to 745       745/829
(89 %)
16 diff
(98.1 %id)
BG341523 B-cells, primary B-cells from tonsils (cell line) .a 1102 to 1865 1 to 753       753/949
(79 %)
13 diff
(98.7 %id)
BQ645196 hepatocellular carcinoma, cell line, Liver .a 1105 to 1839 18 to 764       747/1029
(72 %)
37 diff
(96.5 %id)
H24156 whole brain .a 1109 to 1377 1 to 269       269/269
(100 %)
12 diff
(95.6 %id)
N73151 liver and spleen .a 1115 to 1507 1 to 387       387/394
(98 %)
35 diff
(91.2 %id)
CF455383 peripheral nervous system .a 1130 to 1849 39 to 758       720/758
(94 %)
7 diff
(99.1 %id)
BF842749 head_neck .a 1159 to 1526 1 to 368       368/368
(100 %)
8 diff
(97.9 %id)
BE784802 large cell carcinoma, lung .a 1176 to 1859 1 to 683       683/908
(75 %)
28 diff
(97.0 %id)
BP370763 testis .a 1176 to 1750 1 to 575       575/575
(100 %)
7 diff
(98.8 %id)
BF837986 head_neck .a 1190 to 1726 537 to 1     Submitted on the opposite strand 537/537
(100 %)
7 diff
(98.7 %id)
BX344671   .a 1194 to 2302 1098 to 1       1096/1098
(99 %)
23 diff
(98.0 %id)
AL574055 placenta, Placenta Cot 25-normalized .a 1196 to 2308 1103 to 1       1103/1103
(100 %)
16 diff
(98.6 %id)
BE700913 nervous_normal .a 1215 to 1664 455 to 6       450/455
(98 %)
0 diff
(100 %id)
AA321807 brain, cerebellum .a 1219 to 1493 1 to 276       276/276
(100 %)
4 diff
(98.6 %id)
BE700915 nervous_normal .a 1225 to 1661 442 to 6       437/442
(98 %)
0 diff
(100 %id)
BE772037 prostate_tumor .a 1228 to 1630 412 to 9       404/412
(98 %)
0 diff
(100 %id)
BE700874 nervous_normal .a 1232 to 1663 433 to 3       431/433
(99 %)
0 diff
(100 %id)
BE772031 prostate_tumor .a 1234 to 1650 421 to 4       418/421
(99 %)
1 diff
(99.8 %id)
BE700871 nervous_normal .a 1235 to 1647 416 to 6       411/416
(98 %)
0 diff
(100 %id)
BE700865 nervous_normal .a 1239 to 1660 424 to 2       423/424
(99 %)
0 diff
(100 %id)
AL528601 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1240 to 2305 1063 to 1       1063/1107
(96 %)
30 diff
(97.3 %id)
AL525843 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1251 to 2315 1061 to 1       1061/1065
(99 %)
13 diff
(98.8 %id)
CF456427 peripheral nervous system .a 1262 to 2041 1 to 770       770/851
(90 %)
11 diff
(98.8 %id)
BE700870 nervous_normal .a 1286 to 1657 374 to 3       372/374
(99 %)
0 diff
(100 %id)
AL517820 brain, neuroblastoma, neuroblastoma cells .a 1307 to 2317 1004 to 1       1004/1130
(88 %)
18 diff
(98.5 %id)
AL524777 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1307 to 2272 965 to 1       965/1068
(90 %)
19 diff
(98.3 %id)
BX386969 Neuroblastoma Cot 50-normalized .a 1307 to 2311 1007 to 1       1007/1110
(90 %)
26 diff
(97.7 %id)
BI037029 nervous_tumor .a 1308 to 1608 305 to 2       304/315
(96 %)
5 diff
(98.5 %id)
AA338589 brain .a 1310 to 1573 1 to 264       264/264
(100 %)
3 diff
(98.9 %id)
BE561773 Burkitt lymphoma, lymph .a 1310 to 2122 17 to 826       810/827
(97 %)
26 diff
(96.9 %id)
AW950536   .a 1311 to 1873 1 to 563       563/583
(96 %)
3 diff
(99.5 %id)
BE270524 Burkitt lymphoma, lymph .a 1316 to 2040 21 to 749       729/838
(86 %)
18 diff
(97.9 %id)
BE561768 Burkitt lymphoma, lymph .a 1316 to 2093 22 to 793       772/860
(89 %)
10 diff
(98.9 %id)
BE514398 Burkitt lymphoma, lymph .a 1323 to 1854 35 to 577       543/595
(91 %)
22 diff
(96.4 %id)
BE514243 Burkitt lymphoma, lymph .a 1323 to 2019 27 to 722       696/723
(96 %)
11 diff
(98.5 %id)
BI227431 Burkitt lymphoma, lymph .a 1323 to 2041 21 to 733       713/734
(97 %)
19 diff
(97.5 %id)
BG165588 hypernephroma, cell line, Kidney .a 1324 to 2072 1 to 732       732/964
(75 %)
23 diff
(97.7 %id)
BX401471   .a 1328 to 2266 935 to 1       935/972
(96 %)
6 diff
(99.4 %id)
AA193092 muscle, skeletal muscle .a 1328 to 1645 1 to 318       318/318
(100 %)
11 diff
(96.6 %id)
BI225004 Burkitt lymphoma, lymph .a 1335 to 1964 1 to 628       628/628
(100 %)
3 diff
(99.6 %id)
BI226161 Burkitt lymphoma, lymph .a 1335 to 1955 1 to 615       615/616
(99 %)
8 diff
(98.8 %id)
BF945729 nervous_normal .a 1336 to 1799 480 to 18     Submitted on the opposite strand 463/480
(96 %)
0 diff
(100 %id)
TI_154126204   .a 1339 to 2335 1059 to 83   AAA   977/977
(100 %)
33 diff
(96.7 %id)
BF945793 nervous_normal .a 1341 to 1755 1 to 422       422/422
(100 %)
24 diff
(94.4 %id)
BF945735 nervous_normal .a 1349 to 1805 467 to 10     Submitted on the opposite strand 458/467
(98 %)
0 diff
(100 %id)
BG166713 hypernephroma, cell line, Kidney .a 1373 to 2155 1 to 771       771/950
(81 %)
28 diff
(97.1 %id)
BX345868 Placenta Cot 25-normalized .a 1391 to 2273 883 to 1       883/883
(100 %)
4 diff
(99.6 %id)
TI_149308905   .a 1399 to 2334 1005 to 85   AAA   921/990
(93 %)
29 diff
(97.1 %id)
AL580808 T cells from T cell leukemia .a 1403 to 2264 873 to 12       862/873
(98 %)
2 diff
(99.8 %id)
TI_154073073   .a 1407 to 2090 759 to 85       675/891
(75 %)
31 diff
(96.6 %id)
AA247741   .a 1420 to 1534 1 to 115       115/120
(95 %)
1 diff
(99.2 %id)
AL582229 B cells from Burkitt lymphoma .a 1502 to 2302 800 to 1       800/1060
(75 %)
28 diff
(97.4 %id)
TI_154121146   .a 1511 to 2342 918 to 100   AAA   819/977
(83 %)
25 diff
(97.5 %id)
BI084626 epidermoid carcinoma, cell line, salivary gland .a 1564 to 2305 761 to 20       742/761
(97 %)
6 diff
(99.3 %id)
CA311255 Human Lung Epithelial cells, lung .a 1582 to 2341 778 to 19   AAA   760/760
(100 %)
0 diff
(100 %id)
BI481306 Native Retinal Pigment Epithelium sheets, retina .a 1597 to 1909 12 to 325       314/329
(95 %)
8 diff
(97.6 %id)
BI032603 nervous_normal .a 1602 to 2053 455 to 2       454/455
(99 %)
4 diff
(99.2 %id)
BX434171 placenta .a 1605 to 2332 734 to 1       734/847
(86 %)
18 diff
(97.9 %id)
AI692163 pooled .a 1613 to 2341 730 to 1       730/730
(100 %)
5 diff
(99.4 %id)
BF568784 epithelioid carcinoma cell line, Pancreas .a 1623 to 2304 730 to 24   fully sequenced,   704/727
(96 %)
81 diff
(88.9 %id)
BQ772114 Chondrosarcoma Grade II, Left Pelvis .a 1623 to 2342 738 to 19   tiling clone, AAA   720/720
(100 %)
0 diff
(100 %id)
BE395821 endometrium, adenocarcinoma cell line, uterus .a 1625 to 2286 1 to 661       661/766
(86 %)
15 diff
(98.1 %id)
BU730935 eye, RPE and Choroid .a 1628 to 2336 726 to 19   AAA   708/708
(100 %)
1 diff
(99.9 %id)
AA096194   .a 1629 to 1774 147 to 4     Submitted on the opposite strand 144/147
(97 %)
0 diff
(100 %id)
BU634073 cell lines, Chondrosarcoma .a 1630 to 2334 723 to 19   AAA   705/705
(100 %)
1 diff
(99.9 %id)
BU687261 lung .a 1642 to 2334 711 to 19   AAA   693/693
(100 %)
5 diff
(99.3 %id)
TI_154022430   .a 1655 to 2339 794 to 110   AAA   685/1123
(60 %)
1 diff
(100.0 %id)
BF526327 brain, glioblastoma with EGFR amplification .a 1657 to 2210 1 to 559       559/559
(100 %)
30 diff
(94.7 %id)
CA416403 Chondrosarcoma Cell line .a 1678 to 2335 676 to 19   AAA   658/658
(100 %)
1 diff
(99.9 %id)
AA010919 heart .a 1680 to 1988 1 to 307   fully sequenced,   307/307
(100 %)
1 diff
(99.7 %id)
BI032530 nervous_normal .a 1698 to 2059 360 to 1       360/403
(89 %)
24 diff
(94.1 %id)
BQ300622 bladder_tumor .a 1699 to 2062 74 to 428       355/437
(81 %)
10 diff
(97.8 %id)
BX352564   .a 1699 to 2332 635 to 1       635/817
(77 %)
9 diff
(98.9 %id)
BG117574 adenocarcinoma, cell line, Liver .a 1699 to 2335 8 to 647       640/903
(70 %)
32 diff
(96.5 %id)
BE765185 nervous_tumor .a 1719 to 2029 19 to 329       311/329
(94 %)
6 diff
(98.2 %id)
BE765020 nervous_tumor .a 1727 to 2044 1 to 318       318/319
(99 %)
5 diff
(98.5 %id)
BE765043 nervous_tumor .a 1727 to 2029 1 to 303       303/303
(100 %)
1 diff
(99.7 %id)
BE765179 nervous_tumor .a 1727 to 2025 324 to 27       298/324
(91 %)
0 diff
(100 %id)
BE765183 nervous_tumor .a 1727 to 2029 1 to 303       303/303
(100 %)
1 diff
(99.7 %id)
BF366370 nervous_tumor .a 1727 to 2021 303 to 9       295/303
(97 %)
5 diff
(98.4 %id)
BE464183 Kidney .a 1727 to 2341 617 to 3       615/662
(92 %)
0 diff
(100 %id)
W63645 parathyroid gland, parathyroid tumor .a 1737 to 2266 1 to 527       527/531
(99 %)
14 diff
(97.4 %id)
AI459691 brain, meningioma .a 1749 to 2130 382 to 1       382/382
(100 %)
1 diff
(99.8 %id)
BF818995 colon_ins .a 1752 to 2040 294 to 6     Submitted on the opposite strand 289/294
(98 %)
0 diff
(100 %id)
AA026753 heart .a 1774 to 2162 1 to 392   fully sequenced,   392/392
(100 %)
57 diff
(85.5 %id)
AA614357 lung, lung tumor .a 1774 to 2337 573 to 11   AAA   563/563
(100 %)
6 diff
(99.0 %id)
AJ707832 heart .a 1776 to 2323 1 to 547       547/547
(100 %)
9 diff
(98.4 %id)
AU145129 whole embryo, mainly head .a 1777 to 2342 566 to 1       566/567
(99 %)
17 diff
(97.1 %id)
AJ709275 heart .a 1797 to 2329 1 to 533       533/533
(100 %)
0 diff
(100 %id)
BU621338 cell lines, Chondrosarcoma .a 1799 to 2337 557 to 19   AAA   539/539
(100 %)
14 diff
(97.5 %id)
BM669907 eye, lens .a 1802 to 2335 552 to 19   AAA   534/534
(100 %)
0 diff
(100 %id)
BE765042 nervous_tumor .a 1804 to 2035 1 to 232       232/238
(97 %)
5 diff
(97.9 %id)
BE765036 nervous_tumor .a 1811 to 2035 11 to 235       225/242
(92 %)
8 diff
(96.7 %id)
AV729107 hypothalamus .a 1822 to 2321 1 to 500       500/500
(100 %)
7 diff
(98.6 %id)
BM701774 eye, optic nerve .a 1838 to 2335 1 to 498       498/498
(100 %)
0 diff
(100 %id)
BM989074 Bone, Subchondral Bone .a 1845 to 2335 510 to 19   AAA   492/492
(100 %)
5 diff
(99.0 %id)
BM069827 Islets of Langerhans, Pancreas .a 1851 to 2098 1 to 248   fully sequenced,   248/248
(100 %)
1 diff
(99.6 %id)
BM700400 eye, lens .a 1852 to 2323 1 to 472   fully sequenced,   472/472
(100 %)
2 diff
(99.6 %id)
BP385811 pancreatic islet .a 1860 to 2334 1 to 476     Submitted on the opposite strand 476/480
(99 %)
2 diff
(99.6 %id)
DB568227 hypothalamus .a 1862 to 2341 1 to 480     Submitted on the opposite strand 480/480
(100 %)
2 diff
(99.6 %id)
DB551797 hippocampus .a 1869 to 2337 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
AI209078   .a 1874 to 2341 470 to 4       467/472
(98 %)
0 diff
(100 %id)
F25608 pectoral muscle (after mastectomy) .a 1875 to 1997 17 to 140       124/140
(88 %)
6 diff
(95.8 %id)
BE046188 follicular carcinoma, thyroid .a 1879 to 2334 458 to 3       456/458
(99 %)
0 diff
(100 %id)
AA732586 germinal center B cell .a 1883 to 2337 484 to 31   AAA   454/454
(100 %)
4 diff
(99.2 %id)
DB535775 hippocampus .a 1891 to 2335 1 to 445     Submitted on the opposite strand 445/445
(100 %)
8 diff
(98.3 %id)
AI985909 four pooled poorly-differentiatedadenocarcinomas, lung .a 1894 to 2334 445 to 6       440/445
(98 %)
0 diff
(100 %id)
TI_153989540   .a 1894 to 2335 533 to 92   AAA   442/516
(85 %)
4 diff
(99.3 %id)
BU630197 cell lines, Chondrosarcoma .a 1894 to 2333 458 to 19   AAA   440/445
(98 %)
1 diff
(99.8 %id)
DB547490 hippocampus .a 1897 to 2337 1 to 441     Submitted on the opposite strand 441/441
(100 %)
2 diff
(99.6 %id)
AI357344 brain, glioblastoma (pooled) .a 1899 to 2339 455 to 15   AAA   441/441
(100 %)
12 diff
(97.3 %id)
F36048 pectoral muscle (after mastectomy) .a 1908 to 2296 1 to 388       388/388
(100 %)
3 diff
(99.3 %id)
AA811061 germinal center B cell .a 1913 to 2334 433 to 15   AAA   419/419
(100 %)
11 diff
(97.4 %id)
AA864242 Kidney, kidney tumor .a 1915 to 2332 421 to 4       418/421
(99 %)
0 diff
(100 %id)
AI422321 brain, glioblastoma (pooled) .a 1916 to 2334 419 to 1       419/427
(98 %)
0 diff
(100 %id)
F27172 pectoral muscle (after mastectomy) .a 1917 to 2241 1 to 326       326/326
(100 %)
1 diff
(99.7 %id)
DB533667 hippocampus .a 1929 to 2333 1 to 406     Submitted on the opposite strand 406/408
(99 %)
33 diff
(92.0 %id)
F35484 pectoral muscle (after mastectomy) .a 1933 to 2263 1 to 331       331/331
(100 %)
5 diff
(98.5 %id)
H09104 whole brain .a 1939 to 2335 419 to 12   AAA   408/411
(99 %)
14 diff
(96.6 %id)
AW305116 brain, three pooled meningiomas .a 1946 to 2334 408 to 20   AAA   389/389
(100 %)
13 diff
(96.7 %id)
F29725 pectoral muscle (after mastectomy) .a 1946 to 2182 1 to 237       237/237
(100 %)
3 diff
(98.8 %id)
AW243184 Kidney .a 1947 to 2342 396 to 1       396/396
(100 %)
5 diff
(98.8 %id)
AA192810 muscle, skeletal muscle .a 1952 to 2310 379 to 16       364/385
(94 %)
10 diff
(97.5 %id)
AW243185 Kidney .a 1954 to 2342 389 to 1       389/396
(98 %)
11 diff
(97.3 %id)
AW205543   .a 1954 to 2335 399 to 18   AAA   382/382
(100 %)
0 diff
(100 %id)
F35991 pectoral muscle (after mastectomy) .a 1955 to 2306 1 to 352       352/352
(100 %)
2 diff
(99.5 %id)
BU726905 eye, human retina .a 1956 to 2334 397 to 19   AAA   379/379
(100 %)
0 diff
(100 %id)
AA011309 heart .a 1958 to 2339 385 to 1   fully sequenced,   385/385
(100 %)
9 diff
(97.7 %id)
AA699926 liver and spleen .a 1958 to 2341 384 to 1       384/384
(100 %)
6 diff
(98.5 %id)
AA811049 germinal center B cell .a 1958 to 2306 348 to 1       348/348
(100 %)
2 diff
(99.5 %id)
F19567 pectoral muscle (after mastectomy) .a 1960 to 2289 1 to 330       330/331
(99 %)
2 diff
(99.4 %id)
AJ573051 pectoral muscle (after mastectomy) .a 1966 to 2337 1 to 370   AAA   370/370
(100 %)
2 diff
(99.5 %id)
F37391 pectoral muscle (after mastectomy) .a 1967 to 2332 1 to 366       366/366
(100 %)
5 diff
(98.7 %id)
F29346 pectoral muscle (after mastectomy) .a 1970 to 2257 1 to 289       289/289
(100 %)
2 diff
(99.4 %id)
BM670509 eye, lens .a 1972 to 2339 384 to 17   fully sequenced, AAA   368/368
(100 %)
2 diff
(99.5 %id)
CD616280   .a 1973 to 2198 1 to 225       225/238
(94 %)
3 diff
(98.8 %id)
CD616281   .a 1973 to 2198 233 to 11       223/233
(95 %)
0 diff
(100 %id)
F25005 pectoral muscle (after mastectomy) .a 1974 to 2341 8 to 375       368/383
(96 %)
1 diff
(99.8 %id)
CF146203 CNCAP(3)T-225 cell line, Prostate .a 1976 to 2323 1 to 348   AAA   348/348
(100 %)
5 diff
(98.6 %id)
BM702291 eye, optic nerve .a 1977 to 2335 1 to 359   AAA   359/359
(100 %)
0 diff
(100 %id)
AI991612 Prostate .a 1978 to 2339 381 to 20   AAA   362/362
(100 %)
1 diff
(99.8 %id)
BG060074 brain, glioblastoma without EGFR amplification .a 1979 to 2339 382 to 21   AAA   362/362
(100 %)
2 diff
(99.5 %id)
TI_154178595   .a 1983 to 2323 76 to 416   AAA   341/341
(100 %)
0 diff
(100 %id)
AA904463 pooled .a 1986 to 2338 352 to 1       352/352
(100 %)
4 diff
(98.9 %id)
AI096529 brain, glioblastoma (pooled) .a 1992 to 2334 364 to 22   AAA   343/343
(100 %)
12 diff
(96.6 %id)
H15796 whole brain .a 2001 to 2336 358 to 12       347/403
(86 %)
0 diff
(100 %id)
AI972394 Prostate .a 2007 to 2338 332 to 1       332/332
(100 %)
2 diff
(99.4 %id)
AI972490 Prostate .a 2007 to 2338 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AI972406 Prostate .a 2007 to 2338 332 to 1       332/332
(100 %)
2 diff
(99.4 %id)
H06829 whole brain .a 2017 to 2334 329 to 12   AAA   318/318
(100 %)
2 diff
(99.4 %id)
H12248 whole brain .a 2020 to 2334 326 to 12   AAA Submitted on the opposite strand 315/315
(100 %)
3 diff
(99.1 %id)
F26369 pectoral muscle (after mastectomy) .a 2022 to 2335 15 to 327   AAA   313/327
(95 %)
6 diff
(98.2 %id)
AJ573021 pectoral muscle (after mastectomy) .a 2044 to 2334 1 to 291       291/300
(97 %)
1 diff
(99.7 %id)
BF374920 stomach .a 2045 to 2235 194 to 1       194/194
(100 %)
5 diff
(97.5 %id)
BY799087 eye .a 2049 to 2341 189 to 481       293/300
(97 %)
1 diff
(99.7 %id)
BX113545 whole brain .a 2060 to 2342 297 to 15   AAA Submitted on the opposite strand 283/283
(100 %)
0 diff
(100 %id)
AI368412 brain, glioblastoma (pooled) .a 2065 to 2334 272 to 1       272/272
(100 %)
15 diff
(94.5 %id)
T12365   .a 2068 to 2230 163 to 1       163/163
(100 %)
5 diff
(97.0 %id)
BM069586 Islets of Langerhans, Pancreas .a 2068 to 2334 267 to 1   fully sequenced,   267/267
(100 %)
2 diff
(99.3 %id)
BI001132 head_normal .a 2074 to 2232 166 to 1       166/200
(83 %)
12 diff
(94.0 %id)
F16984 pectoral muscle (after mastectomy) .a 2082 to 2339 1 to 260       260/261
(99 %)
13 diff
(95.1 %id)
CA444195 lung, Metastatic Chondrosarcoma .a 2087 to 2335 268 to 19   AAA   250/250
(100 %)
5 diff
(98.0 %id)
AA579749 colon .a 2091 to 2334 270 to 28   AAA   243/243
(100 %)
2 diff
(99.2 %id)
AW134858   .a 2099 to 2341 260 to 18   AAA   243/252
(96 %)
0 diff
(100 %id)
BF959695 nervous_normal .a 2107 to 2239 11 to 142       132/159
(83 %)
5 diff
(96.9 %id)
BM126459 Islets of Langerhans, Pancreas .a 2125 to 2321 220 to 24   AAA Submitted on the opposite strand 197/203
(97 %)
3 diff
(98.6 %id)
BM127093 Islets of Langerhans, Pancreas .a 2129 to 2319 191 to 1     Submitted on the opposite strand 191/191
(100 %)
0 diff
(100 %id)
H24048.
matches multiple genes
whole brain .a 2132 to 2342 254 to 44   AAA Submitted on the opposite strand, also hits gene JDP2 211/211
(100 %)
2 diff
(99.1 %id)
AA026754 heart .a 2132 to 2340 217 to 1   fully sequenced,   217/217
(100 %)
7 diff
(96.8 %id)
BM126782 Islets of Langerhans, Pancreas .a 2134 to 2290 1 to 157     Submitted on the opposite strand 157/157
(100 %)
0 diff
(100 %id)
H98145 melanocyte .a 2142 to 2334 193 to 1       193/202
(95 %)
1 diff
(99.6 %id)
AW304676 brain, three pooled meningiomas .a 2143 to 2335 195 to 3       193/195
(98 %)
0 diff
(100 %id)
Z38756 brain, total brain .a 2168 to 2334 167 to 1       167/167
(100 %)
2 diff
(98.9 %id)
F24580 pectoral muscle (after mastectomy) .a 2214 to 2341 1 to 128       128/137
(93 %)
1 diff
(99.3 %id)
BG683199 brain, neuroblastoma, cell line .b 1 to 842 1 to 847   tiling clone,   847/947
(89 %)
16 diff
(98.4 %id)
BG683190 brain, neuroblastoma, cell line .b 1 to 852 1 to 854   tiling clone,   854/910
(93 %)
16 diff
(98.3 %id)
R17864 whole brain .b 701 to 1050 1 to 354   tiling clone,   354/357
(99 %)
20 diff
(94.4 %id)
R20333 whole brain .b 755 to 1095 1 to 345   tiling clone,   345/346
(99 %)
15 diff
(95.7 %id)
BI161248 epithelioid carcinoma cell line, Pancreas .b 814 to 1505 1 to 703   tiling clone,   616/780
(78 %)
24 diff
(97.0 %id)
BX350609   .b 877 to 1448 584 to 14   tiling clone,   571/807
(70 %)
10 diff
(98.8 %id)
BG683824 brain, neuroblastoma, cell line .b 1022 to 1971 966 to 3   tiling clone,   964/1031
(93 %)
33 diff
(96.8 %id)
BG683835 brain, neuroblastoma, cell line .b 1236 to 1974 759 to 2   tiling clone,   758/1056
(71 %)
6 diff
(99.5 %id)
R44339 whole brain .b 1783 to 2032 293 to 45   tiling clone, AAA   249/249
(100 %)
3 diff
(98.8 %id)
R43113 whole brain .b 1823 to 2025 224 to 20   AAA   205/205
(100 %)
2 diff
(99.1 %id)
AL522076 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1 to 734 1 to 730   tiling clone,   730/730
(100 %)
16 diff
(97.9 %id)
AK301800 testis .c 122 to 1577 1 to 1456   tiling clone,   1456/1456
(100 %)
0 diff
(100 %id)
AL522075 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .c 1151 to 1946 800 to 1   tiling clone,   800/800
(100 %)
18 diff
(97.8 %id)
AK095942 heart .d 1 to 1892 2 to 1893 exact tiling clone, available from FLJ,   1893/1893
(100 %)
0 diff
(100 %id)
DA565783 heart .d 1 to 578 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB318859 heart .d 1354 to 1892 539 to 1       539/539
(100 %)
0 diff
(100 %id)
CB152091 brain .e 1 to 517 2 to 518   tiling clone,   518/518
(100 %)
1 diff
(99.9 %id)
CB153000 brain .e 1 to 433 2 to 434       434/434
(100 %)
2 diff
(99.6 %id)
CB154003 brain .e 1 to 507 2 to 508       508/508
(100 %)
1 diff
(99.9 %id)
BE743177 adenocarcinoma cell line, ovary .e 287 to 991 1 to 702   tiling clone,   702/703
(99 %)
10 diff
(98.6 %id)
BE745251 adenocarcinoma cell line, ovary .e 287 to 1088 1 to 790   tiling clone,   790/986
(80 %)
27 diff
(97.3 %id)
BE281493 choriocarcinoma, placenta .e 316 to 954 1 to 637   tiling clone,   637/696
(91 %)
12 diff
(98.3 %id)
BE172153 head_neck .f 1 to 341 1 to 345   tiling clone,   345/346
(99 %)
15 diff
(95.7 %id)
BM017871 astrocytoma grade IV, cell line, brain .f 167 to 248 1 to 82       82/82
(100 %)
0 diff
(100 %id)
TI_59388448   .f 167 to 766 97 to 702       606/606
(100 %)
7 diff
(98.9 %id)
BM910778 astrocytoma grade IV, cell line, brain .f 169 to 946 1 to 782   tiling clone,   782/1099
(71 %)
31 diff
(97.2 %id)
CN286533 embryonic stem cells, cell lines H1, H7, andH9 .f 205 to 788 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DB047715 testis .f 376 to 923 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
TI_151774182   .f 592 to 1019 110 to 538   tiling clone,   429/1164
(36 %)
4 diff
(99.7 %id)
AA085152   .f 849 to 1220 1 to 380   tiling clone,   380/409
(92 %)
12 diff
(97.1 %id)
R24716 whole brain .f 973 to 1325 1 to 361   tiling clone,   361/384
(94 %)
19 diff
(95.1 %id)
BF922093 nervous_tumor .f 1062 to 1457 1 to 400   tiling clone,   400/400
(100 %)
15 diff
(96.3 %id)
DB338329 testis .f 1636 to 2176 541 to 1   tiling clone,   541/541
(100 %)
0 diff
(100 %id)
R45450 whole brain .f 1735 to 2169 456 to 12   AAA   445/453
(98 %)
23 diff
(95.0 %id)
DA561620 heart .g 1 to 562 2 to 563 exact tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
T12366   .h-u 1 to 303 1 to 302 exact tiling clone,   302/302
(100 %)
5 diff
(98.4 %id)
BP194232 brain Gene SNTA1, variant not shown         Suspected internal deletion, this clone was ignored    
T78020 liver and spleen Gene SNTA1, variant not shown       AAA This clone was ignored    
T78183 liver and spleen Gene SNTA1, variant not shown         This clone was ignored    
AI990879 pooled germ cell tumors Gene SNTA1, variant not shown         Suspected internal deletion, this clone was ignored    
BG401487 Kidney Gene SNTA1, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI