To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SMYD5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
369 supporting clones for gene SMYD5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CD389978 embryonic trophoblasts, made from WA01 stemcells .a 1 to 642 29 to 676   tiling clone,   654/844
(77 %)
18 diff
(97.9 %id)
DC424324   .a 1 to 586 1 to 586       586/588
(99 %)
12 diff
(98.0 %id)
AK300779   .a 2 to 1461 1 to 1460 E36G tiling clone,   1460/1460
(100 %)
1 diff
(100.0 %id)
DC424438   .a 2 to 720 1 to 722       722/731
(98 %)
10 diff
(98.7 %id)
DC380325 placenta .a 2 to 556 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC386572   .a 2 to 572 1 to 571       571/571
(100 %)
2 diff
(99.7 %id)
DC348628   .a 3 to 567 9 to 574       566/566
(100 %)
2 diff
(99.7 %id)
DC379934 pericardium .a 4 to 567 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC382810 Prostate .a 4 to 564 1 to 562       562/562
(100 %)
3 diff
(99.5 %id)
DC427250   .a 2047 to 2535 487 to 1   tiling clone,   487/498
(97 %)
11 diff
(97.8 %id)
DC427169   .a 2092 to 2535 444 to 1   tiling clone,   444/444
(100 %)
4 diff
(99.1 %id)
DC375032 brain .b 1 to 554 1 to 554   tiling clone,   554/554
(100 %)
0 diff
(100 %id)
DC387040   .b 16 to 585 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC303248 cerebellum .b 17 to 578 1 to 562       562/563
(99 %)
1 diff
(99.9 %id)
NM_006062.2   .b 17 to 2583 1 to 2567 exact RefSeq, AAA   2567/2567
(100 %)
0 diff
(100 %id)
DC299613   .b 22 to 585 1 to 564       564/564
(100 %)
2 diff
(99.7 %id)
DC362622 Liver .b 22 to 581 1 to 560       560/562
(99 %)
3 diff
(99.5 %id)
DC374168 brain .b 22 to 595 1 to 576       576/576
(100 %)
4 diff
(99.4 %id)
DC351743 brain .b 23 to 587 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC361528 Kidney .b 23 to 558 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
DC374489 brain .b 23 to 582 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
DC388894 small intestine .b 23 to 592 1 to 570       570/570
(100 %)
4 diff
(99.3 %id)
AU141278 thyroid gland .b 23 to 750 2 to 730   capped   729/732
(99 %)
3 diff
(99.6 %id)
DC413784 ovary, tumor tissue .b 23 to 578 1 to 556       556/556
(100 %)
1 diff
(99.9 %id)
DC297494   .b 24 to 494 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
DC298282 adrenal gland .b 24 to 599 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC298927 adrenal gland .b 24 to 578 1 to 555       555/555
(100 %)
0 diff
(100 %id)
AK301809 testis .b 24 to 1511 1 to 1488 N199S     1488/1488
(100 %)
1 diff
(100.0 %id)
DC299303   .b 24 to 593 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC299840   .b 24 to 582 1 to 558       558/558
(100 %)
2 diff
(99.7 %id)
DC299912   .b 24 to 591 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC300334   .b 24 to 597 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC301863   .b 24 to 611 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC302011   .b 24 to 583 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC305353 cerebellum .b 24 to 582 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC319370 brain .b 24 to 609 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DC319440 brain .b 24 to 596 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC319610 brain .b 24 to 593 1 to 572       572/572
(100 %)
3 diff
(99.5 %id)
DC319676 brain .b 24 to 588 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC319731 brain .b 24 to 613 1 to 590       590/590
(100 %)
0 diff
(100 %id)
DC319958 brain .b 24 to 603 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC327584 caudate nucleus .b 24 to 569 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC331191 hippocampus .b 24 to 580 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
DC331679 hippocampus .b 24 to 587 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC339148 subthalamic nucleus .b 24 to 606 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DC340662 thalamus .b 24 to 592 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DC340724 thalamus .b 24 to 585 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC341057 thalamus .b 24 to 608 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC341123 thalamus .b 24 to 616 1 to 593       593/593
(100 %)
0 diff
(100 %id)
DC341140 thalamus .b 24 to 617 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
DC341437 thalamus .b 24 to 611 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC341903 thalamus .b 24 to 608 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DC345710 tongue, tumor tissue .b 24 to 611 1 to 588       588/589
(99 %)
2 diff
(99.7 %id)
DC347196 tongue, tumor tissue .b 24 to 582 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC347200 tongue, tumor tissue .b 24 to 586 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
DC297432   .b 24 to 599 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
DC348468   .b 24 to 578 1 to 555       555/557
(99 %)
1 diff
(99.9 %id)
DC348924   .b 24 to 582 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC349068   .b 24 to 575 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC349481   .b 24 to 586 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC427811   .b 24 to 599 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC350365 brain .b 24 to 587 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
DC350745 brain .b 24 to 606 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DC350892 brain .b 24 to 599 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC351096 brain .b 24 to 605 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DC351371 brain .b 24 to 582 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC351468 brain .b 24 to 595 1 to 572       572/572
(100 %)
0 diff
(100 %id)
DC351471 brain .b 24 to 596 1 to 573       573/573
(100 %)
0 diff
(100 %id)
DC351571 brain .b 24 to 483 1 to 460       460/460
(100 %)
0 diff
(100 %id)
DC351587 brain .b 24 to 597 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC351709 brain .b 24 to 567 1 to 544       544/544
(100 %)
0 diff
(100 %id)
DC353078 brain .b 24 to 582 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC353729 brain .b 24 to 634 1 to 611       611/611
(100 %)
0 diff
(100 %id)
DC355025   .b 24 to 483 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
DC357426   .b 24 to 585 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC359306 lung .b 24 to 590 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC360422   .b 24 to 588 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC361136   .b 24 to 583 1 to 560       560/565
(99 %)
2 diff
(99.7 %id)
DC362464 Kidney .b 24 to 607 1 to 584       584/586
(99 %)
2 diff
(99.7 %id)
DC363052 Liver .b 24 to 582 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC428468   .b 24 to 600 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC364275   .b 24 to 578 1 to 555       555/556
(99 %)
1 diff
(99.9 %id)
DC428500   .b 24 to 578 1 to 555       555/557
(99 %)
1 diff
(99.9 %id)
DC367389   .b 24 to 500 1 to 477       477/477
(100 %)
1 diff
(99.8 %id)
DC367529   .b 24 to 573 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC368440   .b 24 to 566 1 to 543       543/543
(100 %)
0 diff
(100 %id)
DC368826   .b 24 to 582 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
AU125007   .b 24 to 745 2 to 728   capped   727/728
(99 %)
7 diff
(99.1 %id)
DC370618   .b 24 to 594 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC370801   .b 24 to 582 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
DC371435   .b 24 to 585 1 to 562       562/562
(100 %)
1 diff
(99.9 %id)
DC374048 brain .b 24 to 482 1 to 458       458/458
(100 %)
5 diff
(99.0 %id)
DC374163 brain .b 24 to 577 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC374248 brain .b 24 to 565 1 to 542       542/542
(100 %)
1 diff
(99.9 %id)
DC374510 brain .b 24 to 605 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC374664 brain .b 24 to 589 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC375050 brain .b 24 to 603 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC375453 brain .b 24 to 483 1 to 462       462/462
(100 %)
4 diff
(99.2 %id)
DC375634 brain .b 24 to 512 1 to 489       489/489
(100 %)
2 diff
(99.6 %id)
DC382928 Prostate .b 24 to 483 1 to 461       461/461
(100 %)
1 diff
(99.8 %id)
DC384455   .b 24 to 589 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC384574   .b 24 to 604 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC384922   .b 24 to 577 1 to 554       554/554
(100 %)
0 diff
(100 %id)
BM827304 stomach .b 24 to 499 1 to 476       476/476
(100 %)
1 diff
(99.8 %id)
DC386071   .b 24 to 512 1 to 487       487/487
(100 %)
3 diff
(99.4 %id)
DC386123   .b 24 to 599 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC386253   .b 24 to 578 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC386271   .b 24 to 577 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
DC386411   .b 24 to 583 1 to 561       561/564
(99 %)
2 diff
(99.7 %id)
DC386548   .b 24 to 588 1 to 565       565/565
(100 %)
3 diff
(99.5 %id)
DC386585   .b 24 to 574 1 to 557       557/557
(100 %)
6 diff
(99.0 %id)
DC387005   .b 24 to 575 1 to 552       552/552
(100 %)
0 diff
(100 %id)
DC387224   .b 24 to 574 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC388128 small intestine .b 24 to 582 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC388830 small intestine .b 24 to 616 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
DC390016 Spleen .b 24 to 609 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DC391897 Spleen .b 24 to 578 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC392020 Spleen .b 24 to 577 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
DC395393 testis .b 24 to 623 1 to 600       600/600
(100 %)
0 diff
(100 %id)
DC395745 testis .b 24 to 568 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC396993 testis .b 24 to 600 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC402240 testis .b 24 to 500 1 to 477       477/477
(100 %)
2 diff
(99.6 %id)
DC420640 uterus .b 24 to 594 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC421633 uterus .b 24 to 568 1 to 545       545/545
(100 %)
0 diff
(100 %id)
DC421694 uterus .b 24 to 587 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DA730083   .b 25 to 637 2 to 614   capped   613/613
(100 %)
2 diff
(99.7 %id)
AU125842   .b 25 to 745 2 to 724   capped   723/724
(99 %)
6 diff
(99.2 %id)
DC421925 uterus .b 25 to 586 1 to 562       562/562
(100 %)
3 diff
(99.5 %id)
DC300712 bladder .b 26 to 584 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC303202 cerebellum .b 26 to 584 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
DC296988   .b 26 to 595 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DC355356   .b 26 to 596 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC382766 Prostate .b 26 to 762 1 to 736       736/736
(100 %)
6 diff
(99.2 %id)
DC389879 Spleen .b 26 to 612 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC399393 testis .b 26 to 586 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC408726 thymus .b 26 to 558 1 to 534       534/534
(100 %)
1 diff
(99.9 %id)
DC366929   .b 27 to 552 1 to 526       526/526
(100 %)
0 diff
(100 %id)
BM706837 eye, optic nerve .b 28 to 586 9 to 567       559/569
(98 %)
9 diff
(98.5 %id)
CN401151 embryonic stem cells, DMSO-treated H9 cellline .b 29 to 448 1 to 420       420/420
(100 %)
2 diff
(99.6 %id)
BU153554 eye, retinoblastoma .b 29 to 821 5 to 802       798/901
(88 %)
18 diff
(98.1 %id)
DC339862 thalamus .b 35 to 588 1 to 554       554/554
(100 %)
0 diff
(100 %id)
CN401150 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 36 to 674 1 to 639       639/639
(100 %)
3 diff
(99.6 %id)
AW410109 muscle, rhabdomyosarcoma .b 36 to 482 15 to 461       447/461
(96 %)
6 diff
(98.7 %id)
DR763522 embryonic stem .b 36 to 870 1 to 834       834/834
(100 %)
2 diff
(99.8 %id)
DA271636 caudate nucleus .b 38 to 601 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CN401148 embryonic stem cells, cell lines H1, H7, andH9 .b 38 to 387 16 to 365       350/365
(95 %)
6 diff
(98.4 %id)
AL550113 placenta, Placenta Cot 25-normalized .b 40 to 1135 2 to 1092       1091/1092
(99 %)
12 diff
(99.0 %id)
BF237669 leiomyosarcoma cell line, uterus .b 40 to 646 1 to 607       607/877
(69 %)
18 diff
(98.0 %id)
BG826958 muscle, rhabdomyosarcoma .b 40 to 609 1 to 570       570/570
(100 %)
1 diff
(99.9 %id)
BU860400 adenocarcinoma, cell line, breast .b 40 to 927 1 to 889       889/891
(99 %)
7 diff
(99.3 %id)
BC073806 Ovary, teratocarcinoma .b 41 to 2583 1 to 2543 exact tiling clone, available from MGC, AAA   2543/2543
(100 %)
0 diff
(100 %id)
CN401152 embryonic stem cells, cell lines H1, H7, andH9 .b 42 to 417 1 to 376       376/376
(100 %)
2 diff
(99.5 %id)
BI911462 leukocyte .b 42 to 651 28 to 640       613/640
(95 %)
14 diff
(97.9 %id)
TI_57232359   .b 42 to 651 28 to 640       613/640
(95 %)
14 diff
(97.9 %id)
AA134765   .b 43 to 422 1 to 381       381/381
(100 %)
8 diff
(98.0 %id)
BQ924929 large cell carcinoma, lung .b 43 to 820 1 to 779       779/923
(84 %)
5 diff
(99.5 %id)
BM822238 stomach .b 43 to 443 1 to 400       400/400
(100 %)
2 diff
(99.5 %id)
DA996577   .b 43 to 574 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA027969   .b 44 to 612 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA311199 hippocampus .b 44 to 613 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA483417 brain .b 44 to 750 2 to 711   capped   710/804
(88 %)
5 diff
(99.4 %id)
DA508844 brain .b 44 to 592 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA556037   .b 44 to 596 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BQ647369 hepatocellular carcinoma, cell line, Liver .b 44 to 1009 1 to 970       968/978
(98 %)
13 diff
(98.7 %id)
BQ643467 lymph, lymphoma, cell line .b 44 to 821 99 to 886       788/891
(88 %)
20 diff
(97.8 %id)
BU855505 ovary, teratocarcinoma, cell line .b 44 to 821 1 to 781       781/846
(92 %)
12 diff
(98.6 %id)
BU931089 ovary, teratocarcinoma, cell line .b 44 to 894 1 to 861       859/864
(99 %)
14 diff
(98.4 %id)
DA781498 brain .b 44 to 608 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA949320 Spleen .b 44 to 598 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB257653 uterus .b 44 to 565 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
CN401153 embryonic stem cells, DMSO-treated H9 cellline .b 45 to 569 8 to 532       525/532
(98 %)
6 diff
(98.9 %id)
DA905037   .b 45 to 594 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BM172305 testis .b 46 to 581 1 to 538       538/541
(99 %)
6 diff
(98.9 %id)
DA747511   .b 46 to 608 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BG772921.
matches multiple genes
testis .b 48 to 797 1 to 749   available from MGC, also hits gene KIAA1586andZNF451 749/749
(100 %)
5 diff
(99.4 %id)
BF530967 anaplastic oligodendroglioma with 1p/19qloss, brain .b 49 to 751 1 to 706       706/910
(77 %)
19 diff
(98.0 %id)
CB594522 Blood, promyelocytic leukemia .b 49 to 927 1 to 887       887/890
(99 %)
11 diff
(98.8 %id)
DA496966 brain .b 54 to 459 165 to 570   capped   406/569
(71 %)
6 diff
(99.0 %id)
BE731940 choriocarcinoma, placenta .b 54 to 795 1 to 743       743/1013
(73 %)
8 diff
(99.3 %id)
DA678813   .b 55 to 628 2 to 575   capped   574/575
(99 %)
1 diff
(99.9 %id)
DB018268 esophageal, tumor tissue .b 55 to 625 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA198479 brain .b 59 to 620 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA774561 brain .b 59 to 616 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA902584   .b 59 to 533 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
DB013446 esophageal, tumor tissue .b 59 to 637 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA026918   .b 61 to 619 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA041003 bladder .b 61 to 615 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
BG420170 Kidney, renal cell adenocarcinoma .b 61 to 741 1 to 683       683/683
(100 %)
5 diff
(99.3 %id)
DA665551   .b 61 to 533 2 to 474   capped   473/473
(100 %)
0 diff
(100 %id)
DA777800 brain .b 61 to 633 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA792577 brain .b 61 to 622 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB180010 kidney, tumor tissue .b 61 to 606 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
R56376 whole brain .b 63 to 483 1 to 427       427/467
(91 %)
19 diff
(96.0 %id)
U50383 brain .b 64 to 2577 1 to 2513       2513/2520
(99 %)
5 diff
(99.9 %id)
AU121890 mammary gland .b 70 to 873 2 to 800   capped   801/843
(95 %)
10 diff
(98.9 %id)
DA477659   .b 75 to 654 2 to 581   capped   580/581
(99 %)
1 diff
(99.9 %id)
DA581564 lung .b 94 to 663 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BE881641 large cell carcinoma, undifferentiated, lung .b 95 to 882 1 to 782       782/930
(84 %)
28 diff
(97.0 %id)
DA901863   .b 113 to 623 2 to 514   capped   513/513
(100 %)
2 diff
(99.7 %id)
CN401149 embryonic stem cells, DMSO-treated H9 cellline .b 118 to 532 1 to 415       415/415
(100 %)
3 diff
(99.3 %id)
CD676164 eye, lens .b 121 to 636 1 to 516       516/516
(100 %)
0 diff
(100 %id)
AL537970 brain, fetal brain .b 150 to 1142 1 to 991       991/994
(99 %)
10 diff
(99.0 %id)
BI192951 epithelioid carcinoma cell line, Pancreas .b 209 to 1081 1 to 874       874/876
(99 %)
13 diff
(98.6 %id)
DA533561 brain .b 222 to 796 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BE891682 melanotic melanoma, skin .b 244 to 896 1 to 655       655/672
(97 %)
4 diff
(99.5 %id)
AA378169 synovial membrane .b 251 to 598 1 to 349       349/349
(100 %)
3 diff
(99.2 %id)
DA475554   .b 333 to 894 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
CV805882 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 351 to 1199 1 to 850   AAA   850/876
(97 %)
9 diff
(99.0 %id)
DA707570   .b 359 to 926 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
CA771402 Pancreas, Purified pancreatic islet .b 397 to 718 1 to 323   fully sequenced,   323/323
(100 %)
3 diff
(99.1 %id)
DA507698 brain .b 405 to 977 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BM558993 eye, retinoblastoma .b 423 to 1369 1 to 955       955/1028
(92 %)
30 diff
(97.1 %id)
BE697481 colon .b 428 to 586 161 to 6       156/163
(95 %)
0 diff
(100 %id)
BE937999 testis_normal .b 428 to 823 413 to 20       394/415
(94 %)
0 diff
(100 %id)
BE812826 amnion_normal .b 436 to 815 1 to 375       375/375
(100 %)
11 diff
(97.1 %id)
BE812773 amnion_normal .b 438 to 752 321 to 6       316/321
(98 %)
3 diff
(99.1 %id)
BE812779 amnion_normal .b 438 to 736 303 to 5       299/303
(98 %)
2 diff
(99.4 %id)
BE697753 colon .b 439 to 586 148 to 3       146/148
(98 %)
1 diff
(99.4 %id)
BE697756 colon .b 439 to 624 195 to 11       185/195
(94 %)
0 diff
(100 %id)
BE697768 colon .b 439 to 614 174 to 1       174/174
(100 %)
3 diff
(98.3 %id)
BE812777 amnion_normal .b 439 to 874 10 to 442       433/442
(97 %)
8 diff
(98.2 %id)
BE812802 amnion_normal .b 439 to 800 361 to 1       361/361
(100 %)
3 diff
(99.2 %id)
BE812819 amnion_normal .b 439 to 810 369 to 1       369/369
(100 %)
5 diff
(98.7 %id)
BE812825 amnion_normal .b 439 to 808 366 to 1       366/366
(100 %)
1 diff
(99.8 %id)
BE812827 amnion_normal .b 439 to 823 387 to 7       381/387
(98 %)
9 diff
(97.7 %id)
BE938002 testis_normal .b 439 to 794 361 to 6       356/361
(98 %)
2 diff
(99.5 %id)
BE938086 testis_normal .b 439 to 774 1 to 338       338/340
(99 %)
2 diff
(99.5 %id)
BE938162 testis_normal .b 439 to 873 436 to 2       435/436
(99 %)
1 diff
(99.8 %id)
BE812890 amnion_normal .b 440 to 899 1 to 459       459/459
(100 %)
9 diff
(98.1 %id)
BE812770 amnion_normal .b 476 to 874 4 to 403       398/403
(98 %)
9 diff
(97.8 %id)
BE812765 amnion_normal .b 480 to 874 1 to 397       397/397
(100 %)
6 diff
(98.5 %id)
BE812780 amnion_normal .b 481 to 874 1 to 394       394/394
(100 %)
3 diff
(99.3 %id)
BQ334157 marrow .b 486 to 588 103 to 3       99/103
(96 %)
7 diff
(93.3 %id)
BG680133 skin, squamous cell carcinoma .b 529 to 1239 1 to 711       711/711
(100 %)
3 diff
(99.6 %id)
CR981330 T-Lymphocytes .b 563 to 1245 1 to 684       684/684
(100 %)
3 diff
(99.6 %id)
BM462438 leiomyosarcoma, uterus .b 587 to 1160 1 to 580       580/1017
(57 %)
15 diff
(98.6 %id)
BU508174 leiomyosarcoma, uterus .b 620 to 1677 1 to 1063       1063/1138
(93 %)
18 diff
(98.5 %id)
DA488231 brain .b 632 to 1200 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
EL954919 eyeball .b 650 to 1118 19 to 487       469/487
(96 %)
7 diff
(98.6 %id)
Z44701 brain, total brain .b 652 to 930 1 to 279       279/279
(100 %)
1 diff
(99.7 %id)
CA771094 Pancreas, Purified pancreatic islet .b 657 to 986 367 to 38   fully sequenced,   330/367
(89 %)
0 diff
(100 %id)
AL523854 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 677 to 1674 1 to 986   fully sequenced,   986/986
(100 %)
4 diff
(99.6 %id)
BI192916 epithelioid carcinoma cell line, Pancreas .b 713 to 1513 1 to 788       788/788
(100 %)
25 diff
(96.9 %id)
BC009484 Ovary, adenocarcinoma .b 714 to 2576 279 to 2141   available from MGC, AAA   1863/2141
(87 %)
6 diff
(99.8 %id)
BE747137 adenocarcinoma cell line, ovary .b 714 to 1258 259 to 800   available from MGC,   542/1169
(46 %)
25 diff
(97.9 %id)
DR760821 embryonic stem .b 723 to 1466 1 to 744       744/744
(100 %)
4 diff
(99.5 %id)
DA909860   .b 789 to 1348 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
BE938025 testis_normal .b 795 to 1403 607 to 1       607/607
(100 %)
7 diff
(98.9 %id)
BG285438 adenocarcinoma, cell line, Prostate .b 847 to 1249 312 to 707       396/707
(56 %)
12 diff
(98.4 %id)
CD300579 testis .b 850 to 1712 1 to 873       873/877
(99 %)
18 diff
(98.0 %id)
BE834028 ovary .b 860 to 1116 274 to 11       262/274
(95 %)
15 diff
(94.6 %id)
BG912866 anaplastic oligodendroglioma with 1p/19qloss, brain .b 896 to 1476 27 to 608       582/611
(95 %)
11 diff
(98.2 %id)
CR996933 T-Lymphocytes .b 934 to 1697 1 to 766       766/776
(98 %)
3 diff
(99.7 %id)
BG333600 melanotic melanoma, skin .b 956 to 1728 1 to 774       774/774
(100 %)
11 diff
(98.6 %id)
BE386605 melanotic melanoma, skin .b 989 to 1626 14 to 653       640/653
(98 %)
22 diff
(96.7 %id)
AA682973 schizophrenic brain S-11 frontal lobe .b 1014 to 1461 447 to 1       447/447
(100 %)
2 diff
(99.6 %id)
BG402827 bladder, transitional cell papilloma, cell line .b 1017 to 1809 1 to 792       792/834
(94 %)
25 diff
(97.1 %id)
BG327720 Kidney, renal cell adenocarcinoma .b 1024 to 1643 1 to 617       617/617
(100 %)
7 diff
(98.9 %id)
CR592777 Placenta Cot 25-normalized .b 1079 to 2556 1 to 1478       1478/1478
(100 %)
0 diff
(100 %id)
AL549962 placenta, Placenta Cot 25-normalized .b 1079 to 1884 1 to 798   fully sequenced,   798/798
(100 %)
4 diff
(99.5 %id)
CB052772 leiomyosarcoma, soft tissue .b 1097 to 1724 25 to 652       628/652
(96 %)
6 diff
(99.1 %id)
AA984349 schizophrenic brain S-11 frontal lobe .b 1102 to 1461 359 to 1       359/362
(99 %)
4 diff
(98.9 %id)
CN299981 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1146 to 1736 1 to 591       591/591
(100 %)
4 diff
(99.4 %id)
BQ685786 ductal carcinoma, cell line, Pancreas .b 1169 to 1956 1 to 794       794/908
(87 %)
11 diff
(98.8 %id)
CD513099 brain, Pituitary .b 1194 to 1835 23 to 668       646/967
(66 %)
26 diff
(97.4 %id)
BQ645918 hepatocellular carcinoma, cell line, Liver .b 1210 to 2098 1 to 904       904/913
(99 %)
27 diff
(97.1 %id)
BY799443 eye .b 1213 to 1795 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
TI_59386069   .b 1213 to 1869 49 to 705       657/709
(92 %)
5 diff
(99.3 %id)
BM006115 hepatocellular carcinoma, cell line, Liver .b 1226 to 1869 1 to 644       644/648
(99 %)
5 diff
(99.3 %id)
AW630396 2 pooled high-grade transitional celltumors, genitourinary tract .b 1243 to 1654 1 to 412       412/412
(100 %)
0 diff
(100 %id)
BQ954618 large cell carcinoma, lung .b 1300 to 2043 1 to 752       752/911
(82 %)
11 diff
(98.8 %id)
BE541941 cervix .b 1371 to 2015 1 to 642       642/794
(80 %)
53 diff
(93.4 %id)
BE179093 head_neck .b 1419 to 1968 1 to 550       550/627
(87 %)
17 diff
(97.3 %id)
AL537969 brain, fetal brain .b 1461 to 2543 1062 to 1       1062/1109
(95 %)
32 diff
(97.2 %id)
BE546892 cervical carcinoma cell line, cervix .b 1463 to 2103 1 to 635       635/636
(99 %)
8 diff
(98.8 %id)
AA429828   .b 1488 to 1928 1 to 441       441/441
(100 %)
0 diff
(100 %id)
BX097647   .b 1489 to 1754 1 to 266       266/266
(100 %)
1 diff
(99.7 %id)
BG897560 cartilage .b 1493 to 1843 86 to 436       351/370
(94 %)
7 diff
(98.2 %id)
D16916   .b 1498 to 1764 1 to 267       267/280
(95 %)
9 diff
(96.8 %id)
AL574080 placenta, Placenta Cot 25-normalized .b 1532 to 2554 1015 to 1       1015/1087
(93 %)
14 diff
(98.8 %id)
BE619364 large cell carcinoma, lung .b 1601 to 2318 1 to 713       713/715
(99 %)
14 diff
(98.1 %id)
AL523853 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .b 1644 to 2566 907 to 1   fully sequenced,   907/907
(100 %)
10 diff
(98.9 %id)
BQ669563 epidermoid carcinoma, cell line, salivary gland .b 1685 to 2565 1 to 893   AAA   893/908
(98 %)
25 diff
(97.3 %id)
BM699231 eye, fetal eyes .b 1686 to 2099 1 to 414   fully sequenced,   414/414
(100 %)
1 diff
(99.8 %id)
BU539385 adenocarcinoma, cell line, breast .b 1705 to 2575 1 to 874       874/911
(95 %)
17 diff
(98.2 %id)
BE388489 endometrium, adenocarcinoma cell line, uterus .b 1765 to 2270 1 to 506       506/506
(100 %)
1 diff
(99.9 %id)
CV573152 cornea, eye .b 1778 to 2366 1 to 589       589/589
(100 %)
0 diff
(100 %id)
TI_149299702   .b 1846 to 2576 831 to 111   AAA   721/912
(79 %)
33 diff
(96.4 %id)
BG177910 adenocarcinoma, cell line, Prostate .b 1847 to 2542 11 to 701       691/960
(71 %)
15 diff
(98.5 %id)
AL573960 placenta, Placenta Cot 25-normalized .b 1854 to 2531 700 to 25   fully sequenced,   676/700
(96 %)
1 diff
(99.9 %id)
AA311436   .b 1891 to 2392 1 to 509       509/509
(100 %)
18 diff
(96.5 %id)
BQ574612 Chondrosarcoma Grade II, Left Pelvis .b 1930 to 2576 665 to 19   AAA   647/647
(100 %)
0 diff
(100 %id)
EC477932 Prostate .b 1957 to 2058 100 to 1       100/100
(100 %)
2 diff
(98.0 %id)
BQ004261 Chondrosarcoma, Left Pelvis .b 1970 to 2576 625 to 19   AAA   607/607
(100 %)
0 diff
(100 %id)
EC499780 Prostate .b 2016 to 2107 95 to 3       93/95
(97 %)
0 diff
(100 %id)
EC519920 Prostate .b 2016 to 2106 91 to 1       91/91
(100 %)
0 diff
(100 %id)
AU147621 mammary gland .b 2017 to 2576 555 to 1       555/561
(98 %)
12 diff
(97.9 %id)
AW242655 Kidney .b 2023 to 2577 572 to 6       567/572
(99 %)
0 diff
(100 %id)
BM809072 amelanotic melanoma, cell line, skin .b 2027 to 2581 1 to 555   AAA   555/555
(100 %)
0 diff
(100 %id)
BM808968 amelanotic melanoma, cell line, skin .b 2027 to 2581 1 to 555   AAA   555/555
(100 %)
1 diff
(99.9 %id)
BM975997 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2031 to 2576 565 to 19   AAA   547/547
(100 %)
21 diff
(96.2 %id)
DB363420   .b 2037 to 2576 539 to 1       539/578
(93 %)
22 diff
(96.2 %id)
BU180418 ductal carcinoma, cell line, Pancreas .b 2042 to 2547 1 to 506       506/531
(95 %)
1 diff
(99.9 %id)
DB362719   .b 2043 to 2576 527 to 1       527/546
(96 %)
15 diff
(97.3 %id)
AI861784 Kidney .b 2055 to 2579 527 to 4       524/527
(99 %)
0 diff
(100 %id)
CB052771 leiomyosarcoma, soft tissue .b 2062 to 2576 551 to 35   AAA   517/517
(100 %)
17 diff
(96.8 %id)
BM669891 eye, fetal eyes .b 2069 to 2583 533 to 19   fully sequenced, AAA   515/515
(100 %)
0 diff
(100 %id)
BU728161 eye, optic nerve .b 2070 to 2576 525 to 19   AAA   507/507
(100 %)
0 diff
(100 %id)
AA310378   .b 2072 to 2245 1 to 174       174/174
(100 %)
0 diff
(100 %id)
BM904606 leiomyosarcoma, uterus .b 2073 to 2576 1 to 504   AAA   504/504
(100 %)
0 diff
(100 %id)
AI768538 Kidney .b 2074 to 2577 505 to 2       504/505
(99 %)
0 diff
(100 %id)
AI816819 2 pooled tumors (clear cell type), Kidney .b 2075 to 2577 508 to 6       503/508
(99 %)
0 diff
(100 %id)
DC426481 Prostate .b 2077 to 2576 500 to 1       500/500
(100 %)
15 diff
(97.0 %id)
AI935721 Kidney .b 2107 to 2576 470 to 1       470/470
(100 %)
3 diff
(99.4 %id)
AA934704 2 pooled tumors (clear cell type), Kidney .b 2119 to 2561 443 to 1       443/443
(100 %)
4 diff
(99.1 %id)
AI809443 pooled .b 2131 to 2576 458 to 13   AAA   446/446
(100 %)
7 diff
(98.5 %id)
EC450716 Prostate .b 2132 to 2234 104 to 6       99/104
(95 %)
0 diff
(100 %id)
EC465170 Prostate .b 2132 to 2234 105 to 6       100/105
(95 %)
0 diff
(100 %id)
EC509050 Prostate .b 2132 to 2224 103 to 14       90/103
(87 %)
0 diff
(100 %id)
EC523763 Prostate .b 2132 to 2234 105 to 6       100/105
(95 %)
0 diff
(100 %id)
EC537831 Prostate .b 2132 to 2224 101 to 13       89/101
(88 %)
0 diff
(100 %id)
EC552295 Prostate .b 2132 to 2234 104 to 6       99/104
(95 %)
0 diff
(100 %id)
EC552361 Prostate .b 2132 to 2224 102 to 14       89/102
(87 %)
0 diff
(100 %id)
AW418572 2 pooled tumors (clear cell type), Kidney .b 2137 to 2577 446 to 6       441/446
(98 %)
0 diff
(100 %id)
FN112071 breast carcinoma .b 2144 to 2243 99 to 4     Submitted on the opposite strand 96/99
(96 %)
0 diff
(100 %id)
TI_153991512   .b 2163 to 2576 515 to 94   AAA   422/429
(98 %)
37 diff
(91.4 %id)
DB381857 thyroid gland .b 2179 to 2583 409 to 1       409/465
(87 %)
14 diff
(97.0 %id)
AA621617   .b 2182 to 2576 413 to 19   AAA   395/395
(100 %)
2 diff
(99.5 %id)
AW150337 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2185 to 2593 414 to 6       409/414
(98 %)
0 diff
(100 %id)
DB369711   .b 2185 to 2576 393 to 1       393/395
(99 %)
2 diff
(99.5 %id)
AI289458 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2192 to 2583 392 to 1       392/392
(100 %)
0 diff
(100 %id)
AW206927   .b 2200 to 2576 394 to 18   AAA   377/377
(100 %)
0 diff
(100 %id)
AW029470 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2205 to 2576 384 to 13   AAA   372/381
(97 %)
2 diff
(99.5 %id)
AA974972 Kidney .b 2236 to 2577 348 to 9       340/348
(97 %)
0 diff
(100 %id)
AW950873   .b 2239 to 2583 22 to 366   AAA   345/366
(94 %)
6 diff
(98.4 %id)
AA352469   .b 2241 to 2373 24 to 156       133/156
(85 %)
5 diff
(96.8 %id)
AI637768 pooled germ cell tumors .b 2248 to 2576 339 to 11   AAA   329/329
(100 %)
1 diff
(99.7 %id)
AW197219 pooled germ cell tumors .b 2248 to 2576 339 to 11   AAA   329/329
(100 %)
6 diff
(98.2 %id)
AW205644   .b 2249 to 2576 345 to 18   AAA   328/338
(97 %)
1 diff
(99.8 %id)
AA446256   .b 2253 to 2576 324 to 1       324/324
(100 %)
2 diff
(99.4 %id)
BE326755 Kidney .b 2276 to 2576 319 to 19   AAA   301/301
(100 %)
2 diff
(99.4 %id)
AI339408 pooled germ cell tumors .b 2282 to 2577 300 to 5       296/300
(98 %)
0 diff
(100 %id)
AW207352   .b 2286 to 2576 308 to 18   AAA   291/292
(99 %)
1 diff
(99.7 %id)
EC479142 Prostate .b 2291 to 2397 1 to 107       107/107
(100 %)
5 diff
(95.4 %id)
EC579313 Prostate .b 2293 to 2397 1 to 103       103/103
(100 %)
2 diff
(98.1 %id)
BM727405 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2328 to 2576 265 to 17   AAA Submitted on the opposite strand 249/260
(95 %)
2 diff
(99.3 %id)
BU740870 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2328 to 2576 12 to 260   AAA Submitted on the opposite strand 249/260
(95 %)
6 diff
(97.7 %id)
AI869551 anaplastic oligodendroglioma, brain .b 2334 to 2578 259 to 14   AAA   246/246
(100 %)
1 diff
(99.6 %id)
AI417307 anaplastic oligodendroglioma, brain .b 2335 to 2576 262 to 21   AAA   242/242
(100 %)
8 diff
(96.7 %id)
AA947499 2 pooled tumors (clear cell type), Kidney .b 2351 to 2576 250 to 25   AAA   226/226
(100 %)
0 diff
(100 %id)
AA974233 pooled germ cell tumors .b 2432 to 2577 154 to 9       146/154
(94 %)
0 diff
(100 %id)
BF434204 Kidney .b 2444 to 2577 134 to 1       134/134
(100 %)
0 diff
(100 %id)
AI867446 pooled germ cell tumors .b 2456 to 2575 148 to 29   AAA   120/120
(100 %)
5 diff
(95.9 %id)
AL038742 Kidney .b 2501 to 2577 1 to 77       77/95
(81 %)
1 diff
(99.0 %id)
DC348603   .c 1 to 571 1 to 571   tiling clone,   571/571
(100 %)
0 diff
(100 %id)
DC428289   .c 1 to 519 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
DC370936   .c 1 to 532 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
DC395326 testis .c 1 to 563 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DA742592   .c 2 to 484 2 to 484   capped   483/483
(100 %)
2 diff
(99.6 %id)
CB140860 Liver .c 3 to 490 1 to 488       488/488
(100 %)
0 diff
(100 %id)
AL120821 melanoma (MeWo cell line) .c 11 to 532 1 to 522       522/522
(100 %)
0 diff
(100 %id)
DC315779 amygdala .c 19 to 604 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DC395211 testis .c 35 to 594 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC351778 brain .c 85 to 637 1 to 553   tiling clone,   553/553
(100 %)
1 diff
(99.9 %id)
BQ890374 brain, neuroblastoma, cell line .c 274 to 764 1 to 495   tiling clone,   493/926
(53 %)
24 diff
(97.5 %id)
BE180962 head_neck .c 681 to 1045 15 to 378   tiling clone,   364/378
(96 %)
9 diff
(97.7 %id)
CR592310 Neuroblastoma Cot 25-normalized .d 1 to 1888 1 to 1888 exact tiling clone,   1888/1888
(100 %)
0 diff
(100 %id)
DC351223 brain .e 1 to 510 1 to 509   tiling clone,   509/509
(100 %)
4 diff
(99.3 %id)
DC358043   .e 2 to 568 1 to 567   tiling clone,   567/567
(100 %)
6 diff
(99.0 %id)
BF754563 colon .e 452 to 810 11 to 371   tiling clone,   361/371
(97 %)
8 diff
(97.9 %id)
BQ082189 stomach .f-u 1 to 609 1 to 609 exact tiling clone,   609/609
(100 %)
1 diff
(99.9 %id)
BF765183 colon_est .f-u 379 to 786 1 to 409   tiling clone,   409/409
(100 %)
14 diff
(96.6 %id)
DC329640 corpus callosum .g 1 to 584 1 to 583 exact tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
CO246528 Chondrosarcoma Lung Metastasis cell lines, lung .h 1 to 673 1 to 672 N97H T124Q V125* tiling clone,   672/816
(82 %)
12 diff
(98.6 %id)
AA379041 synovial membrane .i 1 to 335 1 to 335 exact tiling clone,   335/335
(100 %)
0 diff
(100 %id)
DA872622 Prostate .j 1 to 565 2 to 567   tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
AU123957   .j 458 to 1084 2 to 627   tiling clone, capped   626/626
(100 %)
1 diff
(99.9 %id)
AL043932 testis .j 1082 to 1460 379 to 1   tiling clone,   379/379
(100 %)
1 diff
(99.8 %id)
TI_154195489   .k 1 to 888 10 to 888 P28S R56T Q63H K67N R72X ... tiling clone,   879/1060
(82 %)
23 diff
(97.9 %id)
TI_154196641   .k 2 to 875 11 to 876   tiling clone,   866/1085
(79 %)
19 diff
(98.3 %id)
TI_154197025   .k 5 to 827 80 to 888   tiling clone,   809/985
(82 %)
23 diff
(97.7 %id)
DA147988 amygdala .l 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
DC405825 thymus Gene SMYD5, variant not shown         Suspected internal deletion, this clone was ignored    
AI200084 lung Gene SMYD5, variant not shown         Suspected internal deletion, this clone was ignored    
AI884743 anaplastic oligodendroglioma, brain Gene SMYD5, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C