To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SMC5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
237 supporting clones for gene SMC5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_015110.3   .a 1 to 5964 2 to 5965 exact RefSeq,   5965/5965
(100 %)
0 diff
(100 %id)
DB220819 trachea .a 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
AL603223 human skeletal muscle .a 11 to 519 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
BP231366 muscle .a 13 to 594 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP212196 cerebrum .a 16 to 584 1 to 569       569/569
(100 %)
4 diff
(99.3 %id)
BP215060 corpus callosum .a 16 to 597 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
AL704994 human skeletal muscle .a 16 to 464 1 to 450       448/450
(99 %)
2 diff
(99.6 %id)
BP247917 Kidney .a 16 to 597 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
BP315059 mammary gland .a 16 to 599 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
BP315060 mammary gland .a 16 to 597 1 to 583       583/584
(99 %)
18 diff
(97.0 %id)
DA360640 subthalamic nucleus .a 17 to 576 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA811865 ovary, tumor tissue .a 17 to 667 2 to 654   capped   651/660
(98 %)
2 diff
(99.7 %id)
DA813769   .a 17 to 583 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB048893 testis .a 17 to 582 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB085401 testis .a 17 to 561 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB087181 testis .a 17 to 599 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
BC038225 Breast, mammary adenocarcinoma. .a 27 to 3507 11 to 3491 V306I tiling clone, available from MGC, AAA   3481/3481
(100 %)
1 diff
(100.0 %id)
TI_59393260   .a 27 to 660 76 to 716       641/869
(73 %)
20 diff
(97.7 %id)
CN335426 embryonic stem cells, cell lines H1, H7, andH9 .a 28 to 718 1 to 691       691/691
(100 %)
0 diff
(100 %id)
BM015139 breast, mammary adenocarcinoma, cell line .a 29 to 660 1 to 639       639/867
(73 %)
20 diff
(97.7 %id)
CN335421 embryonic stem cells, cell lines H1, H7, andH9 .a 30 to 429 1 to 400       400/400
(100 %)
2 diff
(99.5 %id)
DR004144 Liver .a 30 to 702 1 to 673       673/673
(100 %)
7 diff
(99.0 %id)
BC017666 Uterus, leiomyosarcoma .a 41 to 2925 1 to 2885   available from MGC, AAA   2885/2885
(100 %)
2 diff
(100.0 %id)
DA574049   .a 45 to 617 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AB011166 brain .a 59 to 5964 1 to 5906 V306I tiling clone, available from KIAA,   5906/5906
(100 %)
3 diff
(100.0 %id)
BE887663 leiomyosarcoma, uterus .a 62 to 765 1 to 699   available from MGC,   699/944
(74 %)
20 diff
(97.9 %id)
DN998200 breast cancer, Mammary gland (cancer tissue) .a 78 to 794 1 to 715       715/715
(100 %)
9 diff
(98.8 %id)
DW459730 Liver .a 79 to 208 15 to 145       131/145
(90 %)
6 diff
(95.9 %id)
FN134544 breast carcinoma .a 79 to 160 1 to 82       82/82
(100 %)
1 diff
(98.8 %id)
CD700292 normal nasopharynx .a 80 to 421 24 to 367       344/367
(93 %)
7 diff
(98.1 %id)
DW411157 Liver .a 83 to 404 8 to 330       323/330
(97 %)
7 diff
(97.9 %id)
DW427900 Liver .a 83 to 351 8 to 277       270/277
(97 %)
6 diff
(97.9 %id)
DW438205 Liver .a 83 to 320 8 to 246       239/246
(97 %)
6 diff
(97.6 %id)
DW456412 Liver .a 83 to 238 12 to 169       158/169
(93 %)
6 diff
(96.5 %id)
DW437544 Liver .a 84 to 319 13 to 248       236/248
(95 %)
6 diff
(97.6 %id)
AK055825 Kidney .a 87 to 2187 1 to 2100   available from FLJ,   2100/2257
(93 %)
4 diff
(99.9 %id)
DA625886 Kidney .a 88 to 640 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BF381271 uterus_tumor .a 90 to 731 5 to 643       639/704
(90 %)
20 diff
(97.2 %id)
DW460649 Liver .a 97 to 217 10 to 131       122/136
(89 %)
6 diff
(95.6 %id)
CN335420 embryonic stem cells, DMSO-treated H9 cellline .a 98 to 458 1 to 361       361/361
(100 %)
0 diff
(100 %id)
AW854564 colon .a 109 to 436 1 to 323       323/335
(96 %)
15 diff
(95.6 %id)
BE146286 head_neck .a 113 to 430 320 to 1     Submitted on the opposite strand 320/325
(98 %)
8 diff
(97.6 %id)
AJ310550   .a 117 to 3507 1 to 3391 V306I C308R AAA   3391/3391
(100 %)
3 diff
(100.0 %id)
DB087174 testis .a 208 to 790 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BF449012 fibrotheoma, ovary .a 263 to 435 1 to 173     Submitted on the opposite strand 173/178
(97 %)
13 diff
(92.7 %id)
CD701390 normal nasopharynx .a 331 to 768 26 to 466       441/468
(94 %)
10 diff
(97.9 %id)
BG177901 adenocarcinoma, cell line, Prostate .a 361 to 1010 1 to 649       650/653
(99 %)
7 diff
(99.0 %id)
DA951880 Spleen .a 497 to 1052 3 to 558   capped   556/557
(99 %)
3 diff
(99.5 %id)
CD358178 testis .a 587 to 1377 1 to 794       794/877
(90 %)
11 diff
(98.8 %id)
DW439756 Liver .a 603 to 828 16 to 241       226/241
(93 %)
14 diff
(94.2 %id)
AL704510 human skeletal muscle .a 605 to 1137 1 to 533       533/533
(100 %)
3 diff
(99.5 %id)
BE004507 breast_normal .a 649 to 1095 20 to 465       446/465
(95 %)
8 diff
(98.3 %id)
T10381   .a 654 to 1029 1 to 371       371/375
(98 %)
7 diff
(98.2 %id)
BM467945 leiomyosarcoma, uterus .a 710 to 1789 1 to 1084       1084/1138
(95 %)
41 diff
(96.4 %id)
BG623559 placenta .a 717 to 1301 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BM468301 melanotic melanoma, skin .a 788 to 1694 13 to 927       915/978
(93 %)
16 diff
(98.4 %id)
BE835242 prostate_normal .a 802 to 1339 73 to 610       538/613
(87 %)
9 diff
(98.6 %id)
BE835280 prostate_normal .a 802 to 1326 525 to 1       525/589
(89 %)
3 diff
(99.5 %id)
CN335422 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 844 to 1580 1 to 736       736/749
(98 %)
4 diff
(99.5 %id)
BP261746 small intestine .a 845 to 1416 1 to 572       572/572
(100 %)
5 diff
(99.2 %id)
BE835430 prostate_normal .a 852 to 1326 475 to 1       475/475
(100 %)
5 diff
(99.0 %id)
DW448887 Liver .a 877 to 1066 17 to 206       190/206
(92 %)
11 diff
(94.7 %id)
BE835407 prostate_normal .a 896 to 1322 430 to 4       427/430
(99 %)
2 diff
(99.6 %id)
BE542318 cervix .a 953 to 1585 1 to 650   AAA   612/914
(66 %)
34 diff
(96.3 %id)
BP222166   .a 1106 to 1684 1 to 577       577/582
(99 %)
8 diff
(98.7 %id)
CR974741 T-Lymphocytes .a 1284 to 2028 1 to 747       747/751
(99 %)
3 diff
(99.7 %id)
FN093354 breast carcinoma .a 1426 to 1488 15 to 77       63/77
(81 %)
6 diff
(92.3 %id)
BG569718 lung .a 1694 to 2344 1 to 650       650/650
(100 %)
5 diff
(99.3 %id)
DB320628 Kidney .a 1809 to 2187 536 to 158       379/536
(70 %)
0 diff
(100 %id)
BX481697   .a 1865 to 2532 1 to 668       668/668
(100 %)
11 diff
(98.4 %id)
CF596770 ovary .a 1923 to 2649 35 to 763       729/771
(94 %)
20 diff
(97.5 %id)
BE770581 prostate_tumor .a 1940 to 2185 91 to 337       247/350
(70 %)
3 diff
(99.2 %id)
AL704617 human skeletal muscle .a 1974 to 2620 1 to 647       647/647
(100 %)
0 diff
(100 %id)
DB223384 trachea .a 1994 to 2562 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
CN335427 embryonic stem cells, DMSO-treated H9 cellline .a 2048 to 2583 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
CN479061 Human Lung Epithelial cells, lung .a 2135 to 2814 679 to 1       679/679
(100 %)
1 diff
(99.9 %id)
BG392882 embryonal carcinoma, cell line, testis .a 2201 to 3001 1 to 800       800/801
(99 %)
14 diff
(98.3 %id)
AW183677 pooled .a 2265 to 2800 536 to 1       536/551
(97 %)
5 diff
(99.1 %id)
BP337781 coronary artery .a 2265 to 2841 7 to 583       577/583
(98 %)
8 diff
(98.7 %id)
AW771355 colon, juvenile granulosa tumor .a 2275 to 2795 520 to 1       520/521
(99 %)
10 diff
(98.1 %id)
AI768299 pooled .a 2283 to 2800 515 to 1       513/515
(99 %)
34 diff
(93.4 %id)
AA813586 pooled .a 2392 to 2796 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AA934963 pooled .a 2395 to 2798 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AA621467   .a 2400 to 2780 402 to 21       383/402
(95 %)
1 diff
(99.8 %id)
AW205145   .a 2438 to 2797 375 to 16   AAA   360/360
(100 %)
0 diff
(100 %id)
BE999980 colon, colon tumor, RER+ .a 2638 to 2797 182 to 23   AAA   160/160
(100 %)
0 diff
(100 %id)
CN335423 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2659 to 3330 1 to 672       672/672
(100 %)
0 diff
(100 %id)
BU160490 melanotic melanoma, skin .a 2704 to 3501 1 to 813       813/878
(92 %)
16 diff
(98.2 %id)
DB230660 trachea .a 2721 to 3296 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA214934 brain .a 2799 to 3335 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
AL534347 brain, fetal brain .a 2877 to 3877 10 to 1004       995/1004
(99 %)
9 diff
(99.2 %id)
BX479633   .a 2932 to 3573 62 to 703       642/703
(91 %)
6 diff
(99.2 %id)
BQ006732 Chondrosarcoma, Left Pelvis .a 2995 to 3507 531 to 19   AAA   513/513
(100 %)
3 diff
(99.5 %id)
BQ002928 Chondrosarcoma, Left Pelvis .a 3045 to 3507 481 to 19   AAA   463/463
(100 %)
2 diff
(99.6 %id)
BG400173 Kidney .a 3131 to 3834 1 to 705       705/922
(76 %)
40 diff
(95.7 %id)
TI_154051483   .a 3140 to 3507 461 to 94   AAA   368/932
(39 %)
5 diff
(99.5 %id)
CA414542 Chondrosarcoma Grade II, Left Pelvis .a 3152 to 3507 374 to 19   AAA   356/356
(100 %)
0 diff
(100 %id)
BX482128   .a 3221 to 3572 1 to 352       352/352
(100 %)
1 diff
(99.8 %id)
BE874709 large cell carcinoma, undifferentiated, lung .a 3294 to 4001 1 to 707       707/707
(100 %)
4 diff
(99.5 %id)
BE175664 head_neck .a 3347 to 3869 523 to 1     Submitted on the opposite strand 523/523
(100 %)
0 diff
(100 %id)
BU178012 melanotic melanoma, skin .a 3347 to 4203 12 to 870       859/870
(98 %)
8 diff
(99.1 %id)
CX870918 embryonic stem .a 3630 to 4454 1 to 825       825/825
(100 %)
0 diff
(100 %id)
DA655744   .a 3803 to 4308 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
DA267846 caudate nucleus .a 3929 to 4450 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
BU569175 testis .a 3964 to 4703 1 to 745       745/748
(99 %)
18 diff
(97.6 %id)
BQ024482 placenta .a 4159 to 4667 528 to 19   AAA   510/510
(100 %)
1 diff
(99.9 %id)
AI887746 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 4176 to 4668 495 to 3       493/495
(99 %)
0 diff
(100 %id)
TI_149306803   .a 4184 to 5017 63 to 888     Submitted on the opposite strand 826/1024
(80 %)
18 diff
(98.3 %id)
BU686616 lung, Primary Lung Epithelial Cells .a 4186 to 4897 1 to 712     Submitted on the opposite strand 712/712
(100 %)
4 diff
(99.5 %id)
BI669878 brain, hypothalamus .a 4219 to 4978 1 to 764       764/764
(100 %)
10 diff
(98.7 %id)
TI_44344412   .a 4224 to 4978 87 to 845       759/845
(89 %)
6 diff
(99.3 %id)
DN912392   .a 4252 to 4826 1 to 572       572/572
(100 %)
5 diff
(99.2 %id)
DA833439 placenta .a 4279 to 4963 2 to 689   capped   688/688
(100 %)
5 diff
(99.3 %id)
DA812289 ovary, tumor tissue .a 4312 to 5025 2 to 717   capped   716/721
(99 %)
9 diff
(98.8 %id)
DA570755 whole embryo, mainly head .a 4318 to 5135 2 to 819   capped   818/818
(100 %)
2 diff
(99.8 %id)
BG287695 bladder, transitional cell papilloma, cell line .a 4321 to 5031 1 to 711       711/928
(76 %)
9 diff
(99.1 %id)
CK430331 eye, lacrimal gland .a 4321 to 4955 1 to 635       635/635
(100 %)
0 diff
(100 %id)
CN335424 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4339 to 5068 1 to 731       731/731
(100 %)
1 diff
(99.9 %id)
DA096899 cerebellum .a 4381 to 4940 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AI473102 Kidney .a 4386 to 4667 295 to 14   AAA   282/282
(100 %)
1 diff
(99.7 %id)
DN912391   .a 4402 to 4961 560 to 1       560/560
(100 %)
1 diff
(99.9 %id)
CX754212 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 4402 to 5179 1 to 770     Submitted on the opposite strand 770/806
(95 %)
12 diff
(98.6 %id)
BI086729 cervix .a 4445 to 5105 1 to 665       665/668
(99 %)
20 diff
(97.1 %id)
CX873385 embryonic stem .a 4462 to 5335 1 to 873       873/873
(100 %)
1 diff
(99.9 %id)
CA842418 Pancreas, Purified pancreatic islet .a 4475 to 4937 10 to 472       463/472
(98 %)
6 diff
(98.8 %id)
BU179094 leiomyosarcoma, uterus .a 4483 to 5129 1 to 646       646/937
(68 %)
2 diff
(99.8 %id)
AL518396 brain, neuroblastoma, neuroblastoma cells .a 4548 to 5008 1 to 461       461/771
(59 %)
7 diff
(99.1 %id)
BX453459 neuroblastoma .a 4559 to 5411 854 to 1       854/865
(98 %)
1 diff
(99.9 %id)
BE936469 nervous_tumor .a 4564 to 4826 261 to 1       261/275
(94 %)
9 diff
(96.8 %id)
BG541574 lung .a 4593 to 5308 1 to 717       717/840
(85 %)
9 diff
(99.0 %id)
BX433075 brain, fetal brain .a 4612 to 5112 503 to 1       503/917
(54 %)
14 diff
(98.5 %id)
DA732239   .a 4636 to 5331 2 to 699   capped   698/698
(100 %)
3 diff
(99.6 %id)
DA734786   .a 4689 to 5328 2 to 643   capped   642/642
(100 %)
7 diff
(99.0 %id)
AW799001 uterus .a 4815 to 5018 8 to 213       206/213
(96 %)
6 diff
(97.2 %id)
BX409885 neuroblastoma .a 4858 to 5557 1 to 701       701/870
(80 %)
18 diff
(98.0 %id)
AL534346 brain, fetal brain .a 4858 to 5934 1063 to 1       1063/1063
(100 %)
24 diff
(97.8 %id)
AW976831   .a 4875 to 5289 445 to 30     Submitted on the opposite strand 416/445
(93 %)
0 diff
(100 %id)
BX409886 neuroblastoma .a 4888 to 5508 41 to 664       624/783
(79 %)
16 diff
(98.0 %id)
EH328918   .a 4893 to 4983 1 to 91       91/91
(100 %)
0 diff
(100 %id)
EH311766   .a 4902 to 4984 1 to 82       82/82
(100 %)
3 diff
(96.4 %id)
BX110390 liver and spleen .a 4935 to 5663 35 to 763       729/766
(95 %)
2 diff
(99.8 %id)
H67767 liver and spleen .a 4937 to 5296 1 to 365       365/365
(100 %)
5 diff
(98.7 %id)
AA354653   .a 4939 to 5155 1 to 218       218/218
(100 %)
3 diff
(98.7 %id)
AA367218 Pancreas .a 4943 to 5216 1 to 283       283/283
(100 %)
11 diff
(96.2 %id)
AW955840   .a 4944 to 5582 1 to 641       641/641
(100 %)
14 diff
(97.9 %id)
DA126491 cerebellum .a 4966 to 5538 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BM836679 Ascites, stomach .a 5029 to 5587 1 to 559       559/559
(100 %)
0 diff
(100 %id)
Z42259 brain, total brain .a 5035 to 5304 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
BI046801 prostate_normal .a 5079 to 5333 1 to 255       255/255
(100 %)
1 diff
(99.7 %id)
EH330064   .a 5095 to 5190 1 to 96       96/96
(100 %)
0 diff
(100 %id)
BC034441 Prostate, adenocarcinoma. .a 5227 to 5960 1 to 734   available from MGC, AAA   734/734
(100 %)
1 diff
(99.9 %id)
BG283438 adenocarcinoma, cell line, Prostate .a 5227 to 5958 1 to 732       732/777
(94 %)
24 diff
(97.0 %id)
BG283874 adenocarcinoma, cell line, Prostate .a 5228 to 5584 1 to 351       351/351
(100 %)
7 diff
(98.1 %id)
EH350035   .a 5251 to 5329 1 to 80       80/80
(100 %)
1 diff
(98.8 %id)
H73230 liver and spleen .a 5251 to 5599 1 to 350       350/350
(100 %)
3 diff
(99.2 %id)
BU627177 Bone, Enchondroma cell line .a 5335 to 5958 642 to 19   AAA   624/624
(100 %)
1 diff
(99.9 %id)
BM988618 lung, Metastatic Chondrosarcoma .a 5337 to 5963 645 to 19   AAA   627/635
(98 %)
2 diff
(99.7 %id)
DB357551 whole embryo, mainly head .a 5385 to 5960 573 to 1       573/579
(98 %)
13 diff
(97.8 %id)
DB380167 placenta .a 5394 to 5964 567 to 1       567/567
(100 %)
19 diff
(96.7 %id)
DB363662   .a 5396 to 5964 570 to 1       570/621
(91 %)
13 diff
(98.0 %id)
CU454152 epidermis .a 5409 to 5940 543 to 12     Submitted on the opposite strand 532/565
(94 %)
0 diff
(100 %id)
DB371636 ovary, tumor tissue .a 5414 to 5964 552 to 1       552/552
(100 %)
25 diff
(95.5 %id)
CA502732 Human Lung Epithelial cells, lung .a 5418 to 5964 565 to 19   AAA   547/561
(97 %)
3 diff
(99.5 %id)
BM997282 lung, Metastatic Chondrosarcoma .a 5443 to 5964 538 to 19   AAA   520/520
(100 %)
3 diff
(99.5 %id)
BG926817 cartilage .a 5450 to 5964 86 to 600   AAA   515/532
(96 %)
6 diff
(98.9 %id)
DB366938   .a 5451 to 5964 510 to 1       510/576
(88 %)
10 diff
(98.3 %id)
AA769114 germinal center B cell .a 5452 to 5960 520 to 13   AAA   508/508
(100 %)
5 diff
(99.1 %id)
BE146336 head_neck .a 5453 to 5823 7 to 377       371/393
(94 %)
7 diff
(98.3 %id)
BE706121 head_neck .a 5459 to 5823 13 to 377       365/390
(93 %)
8 diff
(98.0 %id)
AW844174 colon_normal .a 5463 to 5879 430 to 9       422/439
(96 %)
0 diff
(100 %id)
DB371117 ovary, tumor tissue .a 5470 to 5964 499 to 1       499/500
(99 %)
10 diff
(98.0 %id)
AW152611 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5480 to 5959 487 to 7       481/487
(98 %)
0 diff
(100 %id)
AW024210 Kidney .a 5491 to 5964 473 to 1       473/473
(100 %)
2 diff
(99.6 %id)
BU754504 placenta .a 5493 to 5960 484 to 17   AAA   468/476
(98 %)
0 diff
(100 %id)
BE933668 head_neck .a 5494 to 5913 48 to 474       427/484
(88 %)
32 diff
(93.4 %id)
TI_154032750   .a 5496 to 5964 555 to 87   AAA   469/944
(49 %)
0 diff
(100 %id)
CA443095 lung, Metastatic Chondrosarcoma .a 5496 to 5964 487 to 19   AAA   469/477
(98 %)
0 diff
(100 %id)
CN335425 embryonic stem cells, DMSO-treated H9 cellline .a 5511 to 5942 1 to 432       432/432
(100 %)
1 diff
(99.8 %id)
AW771997 Kidney .a 5524 to 5960 439 to 1       439/439
(100 %)
11 diff
(97.5 %id)
BM988050 Bone, Subchondral Bone .a 5530 to 5964 453 to 19   AAA   435/436
(99 %)
1 diff
(99.8 %id)
AV656337 corresponding non cancerous liver tissue .a 5542 to 5914 1 to 373     Submitted on the opposite strand 373/373
(100 %)
2 diff
(99.5 %id)
AI446610 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 5548 to 5964 418 to 2       417/418
(99 %)
0 diff
(100 %id)
AA912926 pooled .a 5552 to 5961 411 to 2       410/411
(99 %)
0 diff
(100 %id)
CA842940 Pancreas, Purified pancreatic islet .a 5554 to 5964 412 to 2       411/412
(99 %)
0 diff
(100 %id)
R98461 liver and spleen .a 5559 to 5957 408 to 1       408/409
(99 %)
25 diff
(93.9 %id)
AW591649 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5571 to 5961 391 to 1       391/391
(100 %)
1 diff
(99.8 %id)
N70436 liver and spleen .a 5572 to 5979 421 to 4   tiling clone,   418/422
(99 %)
0 diff
(100 %id)
CB243369 Human Lung Epithelial cells, lung .a 5575 to 5964 408 to 19   AAA   390/593
(65 %)
1 diff
(99.9 %id)
BQ029028 Bone, Subchondral Bone .a 5579 to 5964 404 to 19   AAA   386/386
(100 %)
0 diff
(100 %id)
BQ448338 Knee, Osteoarthritic Cartilage .a 5583 to 5958 394 to 19   AAA   376/376
(100 %)
4 diff
(99.0 %id)
AI625731 Kidney .a 5587 to 5964 378 to 1       378/378
(100 %)
2 diff
(99.5 %id)
AW665651 pooled .a 5615 to 5964 354 to 5       350/354
(98 %)
0 diff
(100 %id)
H25312 breast .a 5621 to 5964 1 to 347       347/350
(99 %)
5 diff
(98.6 %id)
AW196596 pooled germ cell tumors .a 5626 to 5961 343 to 8       336/343
(97 %)
0 diff
(100 %id)
H73341 liver and spleen .a 5635 to 5961 331 to 4       328/334
(98 %)
0 diff
(100 %id)
D29466   .a 5639 to 5944 1 to 303       303/303
(100 %)
7 diff
(97.7 %id)
BM988057 Bone, Subchondral Bone .a 5644 to 5964 339 to 19   AAA   321/321
(100 %)
0 diff
(100 %id)
BE084764 breast .a 5646 to 5908 1 to 262       262/271
(96 %)
6 diff
(97.8 %id)
AI523469 aorta .a 5647 to 5964 321 to 4       318/321
(99 %)
0 diff
(100 %id)
CA433328 mixed .a 5655 to 5963 327 to 19   AAA   309/309
(100 %)
11 diff
(96.5 %id)
H67768 liver and spleen .a 5656 to 5911 260 to 1       260/328
(79 %)
10 diff
(97.0 %id)
AW265317 normal squamous epithelium, tongue .a 5675 to 5929 9 to 263     Submitted on the opposite strand 255/263
(96 %)
6 diff
(97.8 %id)
AL518395 brain, neuroblastoma, neuroblastoma cells .a 5717 to 5948 233 to 1     Submitted on the opposite strand 895/1201
(74 %)
66 diff
(94.6 %id)
BI496724 cochlea, ear .a 5732 to 5957 248 to 23       226/248
(91 %)
0 diff
(100 %id)
BM454709 embryonal carcinoma, cell line, testis .a 5737 to 5963 44 to 270   AAA   227/270
(84 %)
6 diff
(97.8 %id)
Z38496 brain, total brain .a 5763 to 5964 202 to 1       202/202
(100 %)
0 diff
(100 %id)
AI245427 Kidney .b 1 to 371 371 to 1   tiling clone,   371/371
(100 %)
0 diff
(100 %id)
BM930312 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 192 to 610 1 to 419   tiling clone, fully sequenced,   419/419
(100 %)
0 diff
(100 %id)
BM683779 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 549 to 1087 557 to 19   tiling clone, fully sequenced, AAA   539/539
(100 %)
0 diff
(100 %id)
BI055363 placenta_normal .c 1 to 397 401 to 2   tiling clone,   400/401
(99 %)
0 diff
(100 %id)
DA555433   .c 71 to 628 2 to 561   tiling clone, capped   560/560
(100 %)
2 diff
(99.7 %id)
BG987441 head_neck .c 446 to 996 31 to 588   tiling clone,   558/588
(94 %)
6 diff
(99.0 %id)
DB318469   .c 1654 to 2234 582 to 1 H2P tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
AI540504 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 1 to 203 204 to 1   tiling clone,   204/204
(100 %)
3 diff
(98.6 %id)
AI809073 pooled .d 107 to 833 725 to 2   tiling clone,   724/758
(95 %)
16 diff
(97.9 %id)
AW665315 pooled .d 217 to 833 617 to 4   tiling clone,   614/617
(99 %)
10 diff
(98.4 %id)
AW023926 cochlea, ear .e 1 to 383 8 to 390 exact tiling clone,   383/390
(98 %)
0 diff
(100 %id)
N79948 multiple sclerosis lesions .f 1 to 446 7 to 459   tiling clone,   453/465
(97 %)
13 diff
(97.3 %id)
BE504535 carcinoid, lung .f 503 to 1181 678 to 1   tiling clone,   678/678
(100 %)
1 diff
(99.9 %id)
BE502701 carcinoid, lung .f 528 to 1183 656 to 1   tiling clone,   656/690
(95 %)
11 diff
(98.5 %id)
N64619 multiple sclerosis lesions .f 646 to 1181 539 to 1       539/567
(95 %)
9 diff
(98.5 %id)
AI459316 carcinoid, lung .f 678 to 1183 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
DA241080 brain .f 714 to 1318 2 to 605   tiling clone, capped   604/604
(100 %)
3 diff
(99.6 %id)
N63168 multiple sclerosis lesions .f 731 to 1181 457 to 1       457/459
(99 %)
6 diff
(98.7 %id)
N63198 multiple sclerosis lesions .f 1043 to 1181 139 to 1       139/141
(98 %)
0 diff
(100 %id)
BF328023 breast_normal .g 1 to 268 273 to -2   tiling clone,   271/287
(94 %)
0 diff
(100 %id)
BF328039 breast_normal .g 1 to 306 309 to -4       309/323
(95 %)
5 diff
(98.5 %id)
AW082881 pooled .g 60 to 512 461 to 10       452/461
(98 %)
2 diff
(99.6 %id)
BX491617   .g 169 to 699 10 to 540 exact tiling clone,   531/540
(98 %)
6 diff
(98.9 %id)
FN122364 breast carcinoma .g 371 to 483 111 to 1     Submitted on the opposite strand 111/111
(100 %)
2 diff
(98.2 %id)
BC020393 Brain, anaplastic oligodendroglioma with1p/19q loss .h-u 1 to 1722 1 to 1726 exact tiling clone, available from MGC,   1726/1747
(98 %)
14 diff
(99.2 %id)
BF346790 anaplastic oligodendroglioma with 1p/19qloss, brain .h-u 1 to 632 1 to 631 exact available from MGC,   631/631
(100 %)
17 diff
(97.4 %id)
AI061139   .h-u 526 to 932 407 to 1       407/407
(100 %)
0 diff
(100 %id)
BG184050   .i-u -10 to 383 1 to 394 exact tiling clone,   394/394
(100 %)
6 diff
(98.5 %id)
DW427473 Liver .j 1 to 225 17 to 241 exact tiling clone, AAA   225/241
(93 %)
15 diff
(93.8 %id)
DA615677   Gene SMC5, variant not shown       capped Suspected internal deletion, this clone was ignored    
AU123876   Gene SMC5, variant not shown       capped This clone was ignored    
EH340404   Gene SMC5, variant not shown         Suspected internal deletion, this clone was ignored    
AK304133 trachea Gene SMC5, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DW442543 Liver Gene SMC5, variant not shown         This clone was ignored    
R84825 eye, retina Gene SMC5, variant not shown              
AA019211 eye, retina Gene SMC5, variant not shown              
AA019231 eye, retina Gene SMC5, variant not shown              
AA709087 heart Gene SMC5, variant not shown         This clone was ignored    
AA404360   Gene SMC5, variant not shown         This clone was ignored    
AA626306 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene SMC5, variant not shown         This clone was ignored    
AA459873   Gene SMC5, variant not shown         This clone was ignored    
AA809572 germinal center B cell Gene SMC5, variant not shown         This clone was ignored    
AA847845 germinal center B cell Gene SMC5, variant not shown         This clone was ignored    
AI222360 pooled Gene SMC5, variant not shown              
DB213791 trachea Gene SMC5, variant not shown       capped      
DB348916 trachea Gene SMC5, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI