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Gene YIPF5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
504 supporting clones for gene YIPF5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001024947.2   .a 1 to 3445 1 to 3445 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 3445/3445
(100 %)
0 diff
(100 %id)
AY640928   .a 85 to 2337 1 to 2253 exact tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2253/2253
(100 %)
0 diff
(100 %id)
AK124065 synovial membrane tissue from rheumatioidarthritis .a 94 to 2337 1 to 2246 G214V available from FLJ,   2246/2246
(100 %)
5 diff
(99.8 %id)
DA982018 synovial membrane tissue from rheumatioidarthritis .a 95 to 597 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DB043159 testis .a 206 to 777 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
TI_1948090579   .a 426 to 755 105 to 440   fully sequenced,   342/348
(98 %)
10 diff
(97.2 %id)
TI_1948090678   .a 426 to 755 110 to 445   fully sequenced,   342/349
(97 %)
9 diff
(97.5 %id)
TI_1948090766   .a 426 to 895 102 to 577   fully sequenced,   482/487
(98 %)
10 diff
(98.0 %id)
EC446241 Prostate .a 429 to 524 1 to 95       95/95
(100 %)
3 diff
(96.9 %id)
DB245604 uterus, tumor tissue .a 434 to 997 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CD632796   .a 437 to 1173 764 to 26       739/766
(96 %)
9 diff
(98.9 %id)
BG166649 hypernephroma, cell line, Kidney .a 439 to 1094 7 to 670       662/670
(98 %)
19 diff
(97.2 %id)
AF140225   .a 442 to 1215 1 to 774 A136D F137L G138A I155S I192Y     774/774
(100 %)
8 diff
(99.0 %id)
CV026998 mixed .a 442 to 1076 1 to 634       634/634
(100 %)
2 diff
(99.7 %id)
CV574764 cornea, eye .a 446 to 1059 1 to 614       614/614
(100 %)
0 diff
(100 %id)
TI_1948090500   .a 446 to 800 133 to 487       355/387
(91 %)
6 diff
(98.5 %id)
BP380148 uterus .a 455 to 1030 1 to 569       569/569
(100 %)
4 diff
(99.3 %id)
AL542272 placenta .a 467 to 1616 1 to 1142       1142/1143
(99 %)
30 diff
(97.4 %id)
BQ060846 lymph, lymphoma, cell line .a 467 to 1359 29 to 925       897/1003
(89 %)
13 diff
(98.8 %id)
DR159638 human embryonic stem cells differentiated toan early endodermal cell type .a 467 to 1218 1 to 752       752/752
(100 %)
0 diff
(100 %id)
CD632792   .a 474 to 1052 625 to 42       584/634
(92 %)
12 diff
(98.2 %id)
CD632794   .a 479 to 1173 731 to 21       619/731
(84 %)
22 diff
(97.0 %id)
CN423567 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 486 to 1050 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BY795473 eye .a 495 to 1113 1 to 618       618/618
(100 %)
1 diff
(99.9 %id)
BQ434957 melanotic melanoma, skin .a 506 to 1187 1 to 691       691/834
(82 %)
12 diff
(98.6 %id)
BP298337   .a 555 to 1132 1 to 579       579/579
(100 %)
3 diff
(99.5 %id)
CB150061 Liver .a 571 to 1244 1 to 674       674/674
(100 %)
0 diff
(100 %id)
AW364013 colon .a 596 to 1132 11 to 564       565/564
(100 %)
77 diff
(86.4 %id)
BP335559 coronary artery .a 631 to 1214 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CN423574 embryonic stem cells, cell lines H1, H7, andH9 .a 680 to 1229 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
TI_1948090580   .a 694 to 1214 647 to 127   fully sequenced,   521/647
(80 %)
0 diff
(100 %id)
TI_1948090679   .a 694 to 1214 646 to 126   fully sequenced,   521/646
(80 %)
0 diff
(100 %id)
CB143262 Liver .a 738 to 1314 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BU199255   .a 780 to 1604 1 to 830       830/913
(90 %)
44 diff
(95.2 %id)
BG541795 lung .a 793 to 1391 1 to 599       599/600
(99 %)
2 diff
(99.7 %id)
CD632805   .a 800 to 1575 780 to 1       780/780
(100 %)
11 diff
(98.6 %id)
BF035681 adenocarcinoma, ovary .a 809 to 1548 1 to 713       713/911
(78 %)
38 diff
(95.9 %id)
CN423571 embryonic stem cells, cell lines H1, H7, andH9 .a 839 to 1312 1 to 473       473/473
(100 %)
1 diff
(99.8 %id)
CF264676 Brain glioblastoma .a 840 to 1692 1 to 864       864/879
(98 %)
16 diff
(98.2 %id)
TI_1948090767   .a 840 to 1214 500 to 126   fully sequenced,   375/500
(75 %)
0 diff
(100 %id)
AA373289 lung .a 882 to 1294 1 to 413       413/413
(100 %)
0 diff
(100 %id)
AL711707 human skeletal muscle .a 897 to 1454 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
BP264733 umbilical vein .a 905 to 1477 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
BP204841 coronary artery .a 948 to 1526 1 to 579       579/579
(100 %)
7 diff
(98.8 %id)
BI860915 breast, mammary adenocarcinoma, cell line .a 960 to 1777 1 to 818       818/820
(99 %)
11 diff
(98.7 %id)
TI_57192409   .a 960 to 1777 58 to 875       818/820
(99 %)
11 diff
(98.7 %id)
CD579753 brain .a 964 to 1594 1 to 636       636/642
(99 %)
19 diff
(97.1 %id)
CB130813 Liver .a 967 to 1557 1 to 591       591/591
(100 %)
0 diff
(100 %id)
TI_1948090501   .a 977 to 1214 363 to 126       238/265
(89 %)
0 diff
(100 %id)
AB014733 heart .a 981 to 3445 1 to 2469   tiling clone,   2469/2469
(100 %)
8 diff
(99.7 %id)
CN423565 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 981 to 1537 23 to 579       557/579
(96 %)
9 diff
(98.5 %id)
BM009206 amelanotic melanoma, cell line, skin .a 1000 to 1781 1 to 785       785/785
(100 %)
7 diff
(99.2 %id)
BM556539 amelanotic melanoma, cell line, skin .a 1001 to 1880 1 to 886   AAA   886/950
(93 %)
41 diff
(95.7 %id)
BM913160 amelanotic melanoma, cell line, skin .a 1001 to 1713 23 to 738       716/1100
(65 %)
21 diff
(98.1 %id)
BM562472 amelanotic melanoma, cell line, skin .a 1001 to 1905 1 to 908       908/998
(90 %)
14 diff
(98.6 %id)
TI_59383925   .a 1001 to 1781 101 to 884       784/784
(100 %)
6 diff
(99.3 %id)
CB113077 Liver .a 1003 to 1440 1 to 437       437/437
(100 %)
9 diff
(98.0 %id)
BF371992 prostate_tumor .a 1008 to 1307 33 to 332       300/332
(90 %)
6 diff
(98.2 %id)
BI260815 cervical carcinoma cell line, cervix .a 1059 to 1735 38 to 713       676/713
(94 %)
6 diff
(99.2 %id)
AW364017 colon .a 1060 to 1703 648 to 10       639/670
(95 %)
0 diff
(100 %id)
BQ930717 sciatic nerve .a 1062 to 1800 1 to 746       746/860
(86 %)
17 diff
(98.1 %id)
AW364018 colon .a 1073 to 1678 610 to 5       606/610
(99 %)
0 diff
(100 %id)
BU959068 mixed (pool of 40 RNAs) .a 1088 to 1769 1 to 689       689/809
(85 %)
19 diff
(97.7 %id)
BI223371 cervical carcinoma cell line, cervix .a 1119 to 1800 1 to 686       686/697
(98 %)
11 diff
(98.5 %id)
BF832747 head_neck .a 1137 to 1408 11 to 281       271/290
(93 %)
13 diff
(95.6 %id)
BX505945   .a 1138 to 1767 1 to 630       630/630
(100 %)
1 diff
(99.9 %id)
DA832720 placenta .a 1158 to 1784 2 to 629   capped   628/634
(99 %)
3 diff
(99.6 %id)
BP206311 coronary artery .a 1189 to 1750 1 to 562       562/562
(100 %)
11 diff
(98.1 %id)
CN423572 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1200 to 1888 11 to 699       689/699
(98 %)
6 diff
(99.2 %id)
CA420878 Bone, Enchondroma cell line .a 1206 to 1889 702 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 684/693
(98 %)
1 diff
(99.9 %id)
BP294088 Liver .a 1210 to 1800 1 to 591       591/592
(99 %)
9 diff
(98.5 %id)
BP294120 Liver .a 1210 to 1800 1 to 587       587/587
(100 %)
11 diff
(98.2 %id)
BP356458 mammary gland .a 1239 to 1818 1 to 582       582/582
(100 %)
31 diff
(94.7 %id)
BX645079   .a 1243 to 1889 1 to 649   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 649/649
(100 %)
5 diff
(99.3 %id)
CV371130 uterus .a 1257 to 1411 1 to 156       156/162
(96 %)
14 diff
(91.4 %id)
CD365961 Alveolar Macrophage, lung .a 1271 to 1889 637 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 619/619
(100 %)
0 diff
(100 %id)
BI038297 nervous_tumor .a 1313 to 1780 1 to 468       468/468
(100 %)
0 diff
(100 %id)
DB356959.
matches multiple genes
whole embryo, mainly head .a 1317 to 1889 572 to 1     also hits gene RHOJ 572/574
(99 %)
2 diff
(99.7 %id)
BG993255 head_neck .a 1329 to 1780 451 to 1       451/456
(98 %)
4 diff
(99.2 %id)
FN086356 breast carcinoma .a 1354 to 1447 94 to 1     Submitted on the opposite strand 94/94
(100 %)
2 diff
(97.9 %id)
CK825254 Pancreas, Purified pancreatic islet .a 1354 to 1854 501 to 1     Submitted on the opposite strand 501/501
(100 %)
0 diff
(100 %id)
DB334880 synovial membrane tissue from rheumatioidarthritis .a 1808 to 2337 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
AL569342 placenta .a 2331 to 3379 1038 to 1   tiling clone,   1038/1038
(100 %)
34 diff
(96.8 %id)
DB379046 placenta .a 2906 to 3445 531 to 1       531/578
(91 %)
15 diff
(97.5 %id)
NM_030799.7   .b 1 to 3194 1 to 3194 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 3194/3194
(100 %)
0 diff
(100 %id)
BP205725 coronary artery .b 20 to 603 1 to 583   tiling clone,   583/583
(100 %)
4 diff
(99.4 %id)
BJ996186 hepatoblastoma .b 49 to 583 1 to 535       535/535
(100 %)
0 diff
(100 %id)
BP363627 lung .b 49 to 630 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
DA066986 cerebellum .b 50 to 622 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
BP223355 colon mucosa .b 50 to 808 1 to 780       780/823
(94 %)
31 diff
(96.3 %id)
DA613235   .b 50 to 619 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA831500 placenta .b 50 to 723 2 to 675   capped   674/674
(100 %)
2 diff
(99.8 %id)
BG699161 brain, hippocampus .b 51 to 774 1 to 726       726/729
(99 %)
15 diff
(98.0 %id)
DB056667 testis .b 53 to 504 90 to 541   capped   452/540
(83 %)
7 diff
(98.8 %id)
BP222054   .b 54 to 635 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CK001228 brain/CNS, Bulk tissue from Human Spinal cord .b 54 to 716 1 to 662       662/663
(99 %)
8 diff
(98.8 %id)
DA889184   .b 54 to 605 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
BF246319 brain, glioblastoma .b 55 to 596 1 to 544       546/833
(65 %)
30 diff
(96.4 %id)
BF794230 lymph, lymphoma, cell line .b 55 to 802 7 to 758       752/883
(85 %)
24 diff
(97.3 %id)
DA614157   .b 55 to 647 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
BP207798 coronary artery .b 56 to 627 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
BP213214 cerebrum .b 56 to 631 1 to 576       576/576
(100 %)
3 diff
(99.5 %id)
BP220587 colon .b 56 to 617 1 to 562       562/562
(100 %)
3 diff
(99.5 %id)
BX421185 B cells (Ramos cell line) .b 56 to 1132 1 to 1065 E124X     1065/1065
(100 %)
19 diff
(98.3 %id)
DB459395 testis .b 56 to 537 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
DB469071 hippocampus .b 56 to 491 1 to 435       435/435
(100 %)
2 diff
(99.6 %id)
BP360033 thalamus .b 56 to 620 1 to 566       566/581
(97 %)
4 diff
(99.4 %id)
BP374720 umbilical cord .b 56 to 636 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
DA362572 subthalamic nucleus .b 57 to 619 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA611785   .b 57 to 634 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA890121 rectum .b 57 to 445 2 to 390   capped   389/389
(100 %)
0 diff
(100 %id)
DA594378 lung .b 58 to 618 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA268308 caudate nucleus .b 59 to 624 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DB267588 uterus .b 59 to 644 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
BP211270 cerebellum .b 60 to 655 1 to 594       594/594
(100 %)
4 diff
(99.4 %id)
BP229338 brain .b 60 to 641 1 to 582       582/582
(100 %)
8 diff
(98.7 %id)
DA886642   .b 60 to 609 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
BP277931   .b 61 to 647 1 to 588       588/588
(100 %)
3 diff
(99.5 %id)
BP195061 brain .b 62 to 643 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP195582 brain .b 62 to 643 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BX647859 human adipose .b 62 to 2086 1 to 2025 P52L P53S D54R M55H M56D ... available from DKFZ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2025/2025
(100 %)
4 diff
(99.9 %id)
BP204749 coronary artery .b 62 to 643 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CR749463 adipose .b 62 to 2086 1 to 2024 exact available from DKFZ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2024/2024
(100 %)
3 diff
(99.9 %id)
BG472579 eye, retinoblastoma .b 62 to 512 1 to 461       461/482
(95 %)
15 diff
(96.9 %id)
BM050421 eye, normal pigmented retinal epithelium .b 62 to 709 1 to 648       648/648
(100 %)
7 diff
(99.0 %id)
CB140497 Liver .b 62 to 493 1 to 432       432/432
(100 %)
1 diff
(99.8 %id)
DA005232   .b 63 to 626 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BC014253 Eye, retinoblastoma .b 63 to 1638 1 to 1577 exact available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1577/1577
(100 %)
2 diff
(99.9 %id)
DA405618 thalamus .b 63 to 630 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BP203786 coronary artery .b 63 to 619 1 to 557       557/574
(97 %)
17 diff
(97.1 %id)
BP204240 coronary artery .b 63 to 645 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DW408530 Liver .b 63 to 385 19 to 343       325/343
(94 %)
11 diff
(96.8 %id)
DW408531 Liver .b 63 to 387 19 to 343       325/343
(94 %)
8 diff
(97.7 %id)
ES310694 scalp interfollicular dermis, skin .b 63 to 486 1 to 424       424/424
(100 %)
0 diff
(100 %id)
BP259571 heart .b 63 to 631 1 to 569       569/569
(100 %)
0 diff
(100 %id)
BM911300 astrocytoma grade IV, cell line, brain .b 63 to 802 18 to 760       743/1091
(68 %)
24 diff
(97.9 %id)
CB124930 Liver .b 63 to 649 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
DA819931   .b 63 to 624 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA829535 placenta .b 63 to 801 2 to 743   capped   742/800
(92 %)
10 diff
(98.8 %id)
DA831342 placenta .b 63 to 664 2 to 603   capped   602/614
(98 %)
7 diff
(98.9 %id)
DA832083 placenta .b 63 to 776 2 to 720   capped   719/719
(100 %)
16 diff
(97.8 %id)
DA873567 Prostate .b 63 to 618 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BM788707 stomach .b 63 to 672 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
DN995852 breast cancer, Mammary gland (cancer tissue) .b 63 to 297 9 to 243       235/243
(96 %)
6 diff
(97.6 %id)
DB114702 thymus .b 63 to 618 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB129360 thymus .b 63 to 615 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BP363479 lung .b 63 to 646 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP365357 lung .b 63 to 653 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
DA018503   .b 64 to 624 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
AK054576   .b 64 to 1638 1 to 1575 exact available from FLJ,   1575/1575
(100 %)
3 diff
(99.9 %id)
DA341434 substantia nigra .b 64 to 650 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DA475993   .b 64 to 639 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA520967 brain .b 64 to 618 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA530133 brain .b 64 to 668 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
CX753814 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 64 to 760 1 to 691     Submitted on the opposite strand 691/834
(82 %)
11 diff
(98.7 %id)
DR155561 human embryonic stem cells differentiated toan early endodermal cell type .b 64 to 847 1 to 784       784/784
(100 %)
0 diff
(100 %id)
DA631394 Kidney .b 64 to 640 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
DA948615 Spleen .b 64 to 623 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB034391 testis .b 64 to 639 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DB183366 liver, tumor tissue .b 64 to 638 2 to 581   capped   580/580
(100 %)
5 diff
(99.2 %id)
DB205242 trachea .b 64 to 541 2 to 479   capped   478/478
(100 %)
1 diff
(99.8 %id)
DA000420   .b 65 to 595 2 to 533   capped   532/532
(100 %)
3 diff
(99.5 %id)
BP206301 coronary artery .b 65 to 636 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
CD693075 normal nasopharynx .b 65 to 650 1 to 587       587/587
(100 %)
6 diff
(99.0 %id)
DA615002   .b 65 to 634 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
CB136518 Liver .b 65 to 551 1 to 487       487/487
(100 %)
0 diff
(100 %id)
CB149513 Liver .b 65 to 573 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
BP352184   .b 65 to 639 1 to 576       576/576
(100 %)
8 diff
(98.7 %id)
BP370804 testis .b 65 to 624 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BC024737 Cervix, carcinoma .b 66 to 1638 1 to 1574 exact available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1574/1574
(100 %)
2 diff
(99.9 %id)
DA060286 cerebellum .b 66 to 619 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
BP204659 coronary artery .b 66 to 649 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BP236818 coronary artery .b 66 to 646 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP254249 Kidney .b 66 to 648 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA618193   .b 66 to 663 2 to 601   capped   600/600
(100 %)
2 diff
(99.7 %id)
BP277102 Kidney .b 66 to 647 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
CB106391 Liver .b 66 to 462 1 to 398       398/398
(100 %)
2 diff
(99.5 %id)
CB131246 Liver .b 66 to 671 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BP289659 lung .b 66 to 621 1 to 557       557/586
(95 %)
15 diff
(97.5 %id)
DB057964 testis .b 66 to 613 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA063999 cerebellum .b 67 to 620 2 to 555   capped   554/562
(98 %)
1 diff
(99.9 %id)
DA385189 thalamus .b 67 to 584 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
DA625024 Kidney .b 67 to 613 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA655299   .b 67 to 650 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA783743 brain .b 67 to 639 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA902136   .b 67 to 649 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA980009 synovial membrane tissue from rheumatioidarthritis .b 67 to 619 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DB046739 testis .b 67 to 622 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB090374 testis .b 67 to 638 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB208654 trachea .b 67 to 519 2 to 457   capped   456/456
(100 %)
3 diff
(99.4 %id)
DB243694 stomach, tumor tissue .b 67 to 619 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
CN423570 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 68 to 707 1 to 639       639/639
(100 %)
6 diff
(99.1 %id)
BX458543 placenta .b 72 to 1126 1 to 1041 exact     1041/1041
(100 %)
19 diff
(98.2 %id)
AY037152   .b 73 to 1270 5 to 1202 C187W AAA   1198/1644
(72 %)
8 diff
(99.6 %id)
BU950527 Pancreas, Purified pancreatic islet .b 73 to 739 8 to 674       667/674
(98 %)
6 diff
(99.2 %id)
CB955658 Pooled-Glandular .b 73 to 588 1 to 512       512/577
(88 %)
8 diff
(98.7 %id)
BP278885   .b 73 to 620 1 to 547       547/577
(94 %)
14 diff
(97.6 %id)
BG682599 skin, squamous cell carcinoma .b 74 to 920 1 to 861       782/941
(83 %)
23 diff
(97.6 %id)
DA070908 cerebellum .b 75 to 647 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BX428063 fetal liver, Liver .b 75 to 913 1 to 838       838/838
(100 %)
2 diff
(99.8 %id)
BF675022 Prostate .b 75 to 619 1 to 544       546/870
(62 %)
18 diff
(98.0 %id)
BG424866 Kidney, renal cell adenocarcinoma .b 75 to 805 1 to 723       725/844
(85 %)
36 diff
(95.8 %id)
CD632797   .b 76 to 615 543 to 5       539/550
(98 %)
2 diff
(99.7 %id)
CD632798   .b 76 to 619 8 to 552       545/554
(98 %)
13 diff
(97.7 %id)
CD632799   .b 76 to 615 545 to 5       541/552
(98 %)
0 diff
(100 %id)
CD632800   .b 76 to 619 8 to 553       546/555
(98 %)
13 diff
(97.7 %id)
CD632801   .b 76 to 615 545 to 5       541/552
(98 %)
0 diff
(100 %id)
CD632802   .b 76 to 619 8 to 553       546/555
(98 %)
13 diff
(97.7 %id)
CD632803   .b 76 to 615 545 to 6       540/552
(97 %)
0 diff
(100 %id)
CD632804   .b 76 to 619 8 to 552       545/554
(98 %)
12 diff
(97.9 %id)
BP222609   .b 76 to 650 1 to 575       575/582
(98 %)
1 diff
(99.9 %id)
BP281362 bone marrow .b 76 to 646 1 to 575       575/575
(100 %)
18 diff
(96.9 %id)
BP281864 bone marrow .b 76 to 652 1 to 578       578/583
(99 %)
4 diff
(99.4 %id)
DR422888 eye, Pterygium .b 76 to 797 1 to 722       722/722
(100 %)
2 diff
(99.8 %id)
BP307952 brain .b 76 to 652 1 to 578       578/581
(99 %)
3 diff
(99.5 %id)
AA305800 colon .b 77 to 416 1 to 339       339/339
(100 %)
5 diff
(98.6 %id)
DA115508 cerebellum .b 77 to 586 2 to 513   capped   512/512
(100 %)
2 diff
(99.7 %id)
BX418371 brain, fetal brain .b 77 to 964 1 to 887 S2X F4X F11X Y12D Y16X ...     887/887
(100 %)
13 diff
(98.6 %id)
BX423242 brain, fetal brain .b 77 to 1050 1 to 965 K115X     965/1021
(94 %)
11 diff
(99.0 %id)
DA604048   .b 77 to 584 2 to 509   capped   508/508
(100 %)
1 diff
(99.9 %id)
DA906311   .b 77 to 650 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB043055 testis .b 77 to 635 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB091592 testis .b 77 to 636 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BP202518 amygdala .b 78 to 658 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP204721 coronary artery .b 78 to 545 1 to 467       467/550
(84 %)
23 diff
(95.9 %id)
R57135   .b 78 to 222 1 to 148       148/151
(98 %)
7 diff
(95.4 %id)
DB483816 hippocampus .b 78 to 534 1 to 457       457/457
(100 %)
1 diff
(99.8 %id)
BP235233 coronary artery .b 78 to 659 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP236790 coronary artery .b 78 to 651 1 to 575       575/582
(98 %)
3 diff
(99.5 %id)
BP252674 Kidney .b 78 to 625 1 to 549       549/581
(94 %)
16 diff
(97.3 %id)
BP278733   .b 78 to 665 1 to 589       589/589
(100 %)
8 diff
(98.7 %id)
BP278780   .b 78 to 659 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP297791   .b 78 to 660 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP323274 Pancreas .b 78 to 659 1 to 582       582/583
(99 %)
10 diff
(98.3 %id)
DA020233   .b 79 to 637 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA030514   .b 79 to 635 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA123653 cerebellum .b 79 to 624 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DA570979 whole embryo, mainly head .b 79 to 928 2 to 851   capped   850/850
(100 %)
1 diff
(99.9 %id)
DA603552   .b 79 to 871 2 to 796   capped   795/795
(100 %)
4 diff
(99.5 %id)
DA919122 small intestine .b 79 to 641 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DB135064 thymus .b 79 to 624 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB188471 liver, tumor tissue .b 79 to 649 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BG249406 hypernephroma, cell line, Kidney .b 80 to 787 1 to 713       713/776
(91 %)
24 diff
(97.0 %id)
BG742644 skin .b 80 to 935 1 to 858       858/858
(100 %)
18 diff
(98.0 %id)
BG717275 testis .b 80 to 543 1 to 462       462/464
(99 %)
6 diff
(98.8 %id)
DB086211 testis .b 80 to 639 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BI091083 cervix .b 81 to 677 1 to 606       604/820
(73 %)
29 diff
(96.5 %id)
BQ716925 sympathetic trunk .b 81 to 971 1 to 894 W218M C219V S220*     894/895
(99 %)
4 diff
(99.6 %id)
CV808905 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 81 to 823 1 to 743       743/743
(100 %)
3 diff
(99.6 %id)
CX754838 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 81 to 799 1 to 719     Submitted on the opposite strand 719/719
(100 %)
0 diff
(100 %id)
BP269722 thyroid .b 81 to 659 1 to 580       580/580
(100 %)
3 diff
(99.5 %id)
DA346064 substantia nigra .b 82 to 667 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA424048   .b 82 to 627 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BP200051 amygdala .b 83 to 666 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BC007829 Uterus, endometrium adenocarcinoma .b 83 to 1638 1 to 1558 exact available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1558/1558
(100 %)
3 diff
(99.9 %id)
BG699067 brain, hippocampus .b 83 to 801 1 to 718       718/732
(98 %)
15 diff
(98.0 %id)
BG699678 brain, hippocampus .b 83 to 767 1 to 685       685/814
(84 %)
22 diff
(97.3 %id)
BQ710963 Spleen .b 84 to 936 1 to 867       867/964
(89 %)
30 diff
(96.9 %id)
BP192995 brain .b 85 to 666 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
AY640925   .b 85 to 2086 1 to 2002 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2002/2002
(100 %)
1 diff
(100.0 %id)
AY640926   .b 85 to 3194 1 to 3110 exact tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 3110/3110
(100 %)
0 diff
(100 %id)
AY640927   .b 85 to 1638 1 to 1554 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1554/1554
(100 %)
0 diff
(100 %id)
BP206129 coronary artery .b 85 to 665 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
AU279904   .b 85 to 658 1 to 574       574/574
(100 %)
0 diff
(100 %id)
BQ949791 large cell carcinoma, lung .b 85 to 926 1 to 844       844/847
(99 %)
8 diff
(99.1 %id)
BP377342 uterus .b 85 to 660 1 to 577       577/584
(98 %)
6 diff
(99.0 %id)
BP194744 brain .b 86 to 669 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DA029195   .b 86 to 649 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA031159   .b 86 to 638 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA125668 cerebellum .b 86 to 649 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA163343 amygdala .b 86 to 649 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BP208016 cerebellum .b 86 to 665 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BP211193 cerebellum .b 86 to 674 1 to 588       588/588
(100 %)
5 diff
(99.2 %id)
DA519824 brain .b 86 to 645 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA553036   .b 86 to 641 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA571458 whole embryo, mainly head .b 86 to 906 2 to 824   capped   823/825
(99 %)
9 diff
(99.0 %id)
BP264110 small intestine .b 86 to 556 1 to 472       472/580
(81 %)
25 diff
(95.7 %id)
BF793125 adrenal cortex carcinoma, cell line, adrenal gland .b 86 to 800 1 to 721       721/918
(78 %)
8 diff
(99.2 %id)
BI770458 pooled lung and spleen .b 86 to 844 1 to 749       749/750
(99 %)
12 diff
(98.4 %id)
DA614291   .b 86 to 653 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA651263   .b 86 to 629 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA818563   .b 86 to 652 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BP320229 placenta .b 86 to 693 1 to 609       609/609
(100 %)
5 diff
(99.2 %id)
DB043525 testis .b 86 to 651 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB082973 testis .b 86 to 638 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BP362156 thalamus .b 86 to 665 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BP366071 lung .b 86 to 667 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DB199394 trachea .b 86 to 661 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA412846 thalamus .b 87 to 623 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
BU150881 dorsal root ganglia .b 87 to 980 1 to 898 K146R F227L I228F S229L A230H ...     898/908
(98 %)
13 diff
(98.6 %id)
TI_57179728   .b 87 to 844 58 to 805       748/806
(92 %)
14 diff
(98.3 %id)
BF967229 brain, hypothalamus .b 88 to 769 10 to 678       671/800
(83 %)
24 diff
(97.0 %id)
CD705453 normal nasopharynx .b 91 to 383 18 to 310       293/310
(94 %)
9 diff
(97.1 %id)
CD705635 normal nasopharynx .b 91 to 442 21 to 371       353/371
(95 %)
9 diff
(97.6 %id)
AL599810   .b 91 to 711 20 to 642       623/642
(97 %)
6 diff
(99.1 %id)
BF245290 brain, glioblastoma .b 93 to 651 1 to 556       556/556
(100 %)
11 diff
(98.1 %id)
BQ650570 hepatocellular carcinoma, cell line, Liver .b 95 to 798 1 to 705       705/888
(79 %)
8 diff
(99.1 %id)
BQ645505 hepatocellular carcinoma, cell line, Liver .b 95 to 886 1 to 800       800/947
(84 %)
23 diff
(97.6 %id)
BQ646289 hepatocellular carcinoma, cell line, Liver .b 95 to 933 1 to 849       849/916
(92 %)
18 diff
(98.1 %id)
BQ652735 hepatocellular carcinoma, cell line, Liver .b 95 to 994 1 to 904 Q204P G208X C219G I226Y F227L ...     904/947
(95 %)
23 diff
(97.6 %id)
CB131276 Liver .b 95 to 700 1 to 607       607/607
(100 %)
3 diff
(99.6 %id)
EL948672 eyeball .b 98 to 473 1 to 378       378/380
(99 %)
12 diff
(96.9 %id)
BE896822 melanotic melanoma, skin .b 98 to 773 1 to 690       690/794
(86 %)
17 diff
(97.9 %id)
CN423569 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 100 to 832 9 to 741       733/745
(98 %)
10 diff
(98.7 %id)
AW401534 lymph .b 101 to 268 8 to 175       168/175
(96 %)
6 diff
(96.6 %id)
AA375715 lung .b 102 to 388 1 to 287       287/287
(100 %)
2 diff
(99.4 %id)
BP204531 coronary artery .b 102 to 686 1 to 585       585/585
(100 %)
4 diff
(99.4 %id)
CN423564 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 102 to 782 1 to 682       682/682
(100 %)
6 diff
(99.2 %id)
BE395704 endometrium, adenocarcinoma cell line, uterus .b 102 to 730 1 to 624       624/624
(100 %)
7 diff
(98.9 %id)
DA678787   .b 103 to 389 2 to 288   capped   287/320
(89 %)
1 diff
(99.7 %id)
BF382749 brain, primitive neuroectoderm .b 104 to 806 1 to 697       699/874
(79 %)
39 diff
(95.6 %id)
EC551516 Prostate .b 106 to 212 1 to 101       101/102
(99 %)
8 diff
(92.2 %id)
AA356684   .b 107 to 420 1 to 313       313/313
(100 %)
1 diff
(99.7 %id)
EC498053 Prostate .b 107 to 212 1 to 105       105/105
(100 %)
1 diff
(99.1 %id)
CD657305 Embryonic Stem cells .b 107 to 893 12 to 791       780/807
(96 %)
18 diff
(97.8 %id)
AW964084   .b 108 to 708 1 to 599       599/599
(100 %)
5 diff
(99.2 %id)
BP205523 coronary artery .b 109 to 691 1 to 584       584/584
(100 %)
15 diff
(97.5 %id)
CD519297 White Matter .b 109 to 977 1 to 875 I226Y F227L I228F S229L A230H ...     875/875
(100 %)
10 diff
(98.9 %id)
DA141658 alzheimer cortex .b 110 to 651 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BP205342 coronary artery .b 110 to 692 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA544480   .b 111 to 649 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
AF318329   .b 112 to 1638 1 to 1530 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1530/1530
(100 %)
7 diff
(99.6 %id)
DA578556   .b 112 to 678 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BM310949 Pancreas, Purified pancreatic islet .b 113 to 742 1 to 630       630/630
(100 %)
0 diff
(100 %id)
BG505011 embryonal carcinoma, testis .b 113 to 799 1 to 687       687/805
(85 %)
12 diff
(98.6 %id)
DA603082   .b 115 to 679 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
AA171435   .b 115 to 543 1 to 429       429/430
(99 %)
2 diff
(99.6 %id)
BF668388 brain, primitive neuroectoderm .b 115 to 696 1 to 569       574/824
(69 %)
28 diff
(96.7 %id)
DA548366   .b 116 to 672 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
AY358863   .b 117 to 2092 1 to 1976 exact     1976/1976
(100 %)
1 diff
(100.0 %id)
CD632806   .b 117 to 805 1 to 681       683/686
(99 %)
18 diff
(97.4 %id)
BG745237 Spleen .b 124 to 761 1 to 641       641/1012
(63 %)
19 diff
(98.2 %id)
BP204546 coronary artery .b 125 to 708 1 to 586       586/588
(99 %)
4 diff
(99.4 %id)
BU949478 Pancreas, Purified pancreatic islet .b 125 to 758 1 to 633       633/633
(100 %)
9 diff
(98.6 %id)
DA363040 subthalamic nucleus .b 126 to 677 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BQ710172 Spleen .b 126 to 1009 1 to 890 G208X S255F V256R F257L     890/900
(98 %)
11 diff
(98.8 %id)
CV803260 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 126 to 802 1 to 675       675/859
(78 %)
3 diff
(99.7 %id)
CN423568 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 128 to 769 1 to 643       643/643
(100 %)
2 diff
(99.7 %id)
CN423573 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 132 to 782 1 to 652       652/652
(100 %)
2 diff
(99.7 %id)
CN423566 embryonic stem cells, DMSO-treated H9 cellline .b 134 to 723 1 to 590       590/590
(100 %)
0 diff
(100 %id)
BU941511 mixed (pool of 40 RNAs) .b 135 to 620 1 to 495       495/771
(64 %)
17 diff
(97.8 %id)
CB120933 Liver .b 135 to 273 1 to 139       139/139
(100 %)
0 diff
(100 %id)
DA690872   .b 136 to 708 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA708805   .b 136 to 739 2 to 605   capped   604/604
(100 %)
3 diff
(99.6 %id)
BP253743 Kidney .b 137 to 719 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
BP194094 brain .b 138 to 718 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AK223515   .b 138 to 1656 1 to 1520 C244R     1520/1525
(99 %)
7 diff
(99.6 %id)
BP204401 coronary artery .b 138 to 717 1 to 582       582/582
(100 %)
9 diff
(98.5 %id)
BP204562 coronary artery .b 138 to 720 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
BP204837 coronary artery .b 138 to 769 1 to 632       632/632
(100 %)
20 diff
(96.9 %id)
BP205134 coronary artery .b 138 to 720 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
BP205418 coronary artery .b 138 to 717 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BP205679 coronary artery .b 138 to 719 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP206020 coronary artery .b 138 to 717 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP207468 coronary artery .b 138 to 718 1 to 581       581/582
(99 %)
1 diff
(99.9 %id)
BP207741 coronary artery .b 138 to 720 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
BP207960 coronary artery .b 138 to 716 1 to 579       579/581
(99 %)
4 diff
(99.4 %id)
BP208304 cerebellum .b 138 to 720 1 to 583       583/583
(100 %)
0 diff
(100 %id)
CB106516 Liver .b 138 to 651 1 to 514       514/514
(100 %)
0 diff
(100 %id)
DB169221 kidney, tumor tissue .b 138 to 719 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA543883   .b 139 to 695 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA568808 whole embryo, mainly head .b 139 to 994 2 to 852 C187X C219W S220K S222F A223C ... capped   851/853
(99 %)
14 diff
(98.4 %id)
DA601872   .b 139 to 647 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DA885699   .b 139 to 704 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BP336090 coronary artery .b 139 to 739 1 to 601       601/601
(100 %)
0 diff
(100 %id)
BP336354 coronary artery .b 139 to 722 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BQ694872 adipose .b 140 to 750 1 to 612       612/612
(100 %)
1 diff
(99.9 %id)
BP206802 coronary artery .b 141 to 716 1 to 576       576/581
(99 %)
6 diff
(99.0 %id)
BM011688 brain, neuroblastoma, cell line .b 141 to 946 1 to 806       806/807
(99 %)
7 diff
(99.2 %id)
TI_59380861   .b 141 to 946 95 to 900       806/807
(99 %)
7 diff
(99.2 %id)
BM721122 eye, fetal eye .b 141 to 837 1 to 697     Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 697/697
(100 %)
1 diff
(99.9 %id)
BM887934 eye .b 146 to 664 1 to 528       528/544
(97 %)
10 diff
(98.2 %id)
CD632791   .b 159 to 793 1 to 637       639/640
(99 %)
19 diff
(97.1 %id)
CD632793   .b 159 to 799 1 to 636       636/647
(98 %)
6 diff
(99.1 %id)
CD632795   .b 159 to 780 1 to 626       626/628
(99 %)
13 diff
(98.0 %id)
BQ932724 sciatic nerve .b 161 to 994 1 to 844 I216M G217E C219G S220G F221X ...     844/891
(94 %)
21 diff
(97.7 %id)
BG746105 Spleen .b 802 to 1564 798 to 26       773/814
(94 %)
0 diff
(100 %id)
BM679547 eye, fetal eye .b 978 to 1638 678 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 661/661
(100 %)
0 diff
(100 %id)
AA169752   .b 1088 to 1638 551 to 1       551/552
(99 %)
9 diff
(98.4 %id)
DB355367 whole embryo, mainly head .b 1089 to 1638 550 to 1       550/552
(99 %)
10 diff
(98.2 %id)
DB376973 placenta .b 1089 to 1638 550 to 1       550/552
(99 %)
14 diff
(97.5 %id)
DB358314 whole embryo, mainly head .b 1108 to 1638 532 to 1       532/549
(96 %)
16 diff
(97.1 %id)
DB377195 placenta .b 1124 to 1638 515 to 1       515/517
(99 %)
4 diff
(99.3 %id)
DB294926   .b 1126 to 1638 513 to 1       513/513
(100 %)
0 diff
(100 %id)
DB378076 placenta .b 1136 to 1638 502 to 1       502/572
(87 %)
11 diff
(98.1 %id)
DB357789 whole embryo, mainly head .b 1142 to 1638 498 to 1       498/498
(100 %)
5 diff
(99.0 %id)
DB374403 placenta .b 1188 to 1638 452 to 1       452/452
(100 %)
6 diff
(98.7 %id)
BX428062 fetal liver, Liver .b 1210 to 2055 848 to 1       848/860
(98 %)
33 diff
(96.2 %id)
BJ996187 hepatoblastoma .b 1213 to 1602 391 to 1       391/391
(100 %)
2 diff
(99.5 %id)
BU950236 Pancreas, Purified pancreatic islet .b 1229 to 1637 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
BU949237 Pancreas, Purified pancreatic islet .b 1324 to 1637 314 to 1       314/314
(100 %)
0 diff
(100 %id)
CA389327 eye, RPE/choroid .c 1 to 684 1 to 684   tiling clone,   684/684
(100 %)
0 diff
(100 %id)
BX338306 Placenta Cot 25-normalized .c 8 to 930 1 to 912 exact tiling clone, fully sequenced,   912/912
(100 %)
13 diff
(98.6 %id)
BX338305 Placenta Cot 25-normalized .c 911 to 1832 906 to 1   tiling clone, fully sequenced,   906/906
(100 %)
20 diff
(97.8 %id)
AY640929   .d 1 to 2132 2 to 2133 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 2133/2133
(100 %)
1 diff
(100.0 %id)
BU959761 mixed (pool of 40 RNAs) .d 1169 to 1808 1 to 648       648/758
(85 %)
22 diff
(97.1 %id)
DA571511 whole embryo, mainly head .d 1195 to 2022 2 to 833   capped   832/832
(100 %)
9 diff
(99.0 %id)
AI983855 adenocarcinoma, Pancreas .d 1201 to 1685 487 to 1       487/487
(100 %)
5 diff
(99.0 %id)
AI925556 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 1206 to 1685 480 to 1       480/480
(100 %)
0 diff
(100 %id)
BE677197 dorsal root ganglia .d 1220 to 1687 469 to 1       469/469
(100 %)
2 diff
(99.6 %id)
AA622018 colon, colon tumor RER+ .d 1233 to 1683 450 to 1       450/450
(100 %)
3 diff
(99.4 %id)
AW069481 bone marrow stroma .d 1245 to 1684 458 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 440/440
(100 %)
0 diff
(100 %id)
AA826793 invasive tumor (cell line), Prostate .d 1246 to 1684 439 to 1       439/439
(100 %)
8 diff
(98.2 %id)
BM310652 Pancreas, Purified pancreatic islet .d 1261 to 1683 423 to 1       423/423
(100 %)
0 diff
(100 %id)
AI352114   .d 1263 to 1687 426 to 1       426/426
(100 %)
3 diff
(99.3 %id)
BX117068 liver and spleen .d 1266 to 1987 1 to 722       722/722
(100 %)
7 diff
(99.1 %id)
BE677196 dorsal root ganglia .d 1266 to 1687 423 to 1       423/423
(100 %)
2 diff
(99.6 %id)
AA630606   .d 1277 to 1682 405 to 1       405/405
(100 %)
13 diff
(96.8 %id)
N76577 liver and spleen .d 1290 to 1450 1 to 162       162/162
(100 %)
3 diff
(98.2 %id)
BF382750 brain, primitive neuroectoderm .d 1296 to 1775 1 to 483       483/815
(59 %)
25 diff
(97.0 %id)
TI_154110764   .d 1330 to 2131 886 to 87       800/1033
(77 %)
0 diff
(100 %id)
BU930726 Prostate .d 1405 to 1876 1 to 478       478/1030
(46 %)
8 diff
(99.3 %id)
AV726728 hypothalamus .d 1507 to 2014 16 to 523   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 508/523
(97 %)
6 diff
(98.9 %id)
BQ009703 Chondrosarcoma, Left Pubic Bone .d 1525 to 2132 626 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 608/608
(100 %)
0 diff
(100 %id)
AW970436   .d 1593 to 2037 31 to 475       445/593
(75 %)
9 diff
(98.5 %id)
BX503537   .d 1594 to 2134 541 to 2       540/541
(99 %)
0 diff
(100 %id)
CD638897 pooled .d 1606 to 2134 18 to 546       529/552
(95 %)
7 diff
(98.8 %id)
BF882969 lung_tumor .d 1628 to 1963 336 to 1     Submitted on the opposite strand 336/336
(100 %)
3 diff
(99.2 %id)
BF883778 lung_tumor .d 1628 to 1963 337 to 1     Submitted on the opposite strand 337/337
(100 %)
2 diff
(99.5 %id)
BU564969 mixed (pool of 40 RNAs) .d 1654 to 2014 1 to 366       366/401
(91 %)
8 diff
(98.1 %id)
AW473802 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 1661 to 2139 480 to 1       480/480
(100 %)
2 diff
(99.6 %id)
AB083072 thyroid .d 1674 to 2128 1 to 457   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 457/457
(100 %)
3 diff
(99.4 %id)
BF590308 pooled .d 1682 to 2134 460 to 7       454/460
(98 %)
0 diff
(100 %id)
N54466 liver and spleen .d 1685 to 2132 449 to 1       449/450
(99 %)
5 diff
(98.9 %id)
CA428285 Bone, Subchondral Bone .d 1685 to 2132 466 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 448/450
(99 %)
1 diff
(99.8 %id)
AI341115 pooled germ cell tumors .d 1687 to 2134 453 to 6       448/453
(98 %)
0 diff
(100 %id)
AW069100 bone marrow stroma .d 1690 to 2132 461 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 443/443
(100 %)
0 diff
(100 %id)
DB522041 testis .d 1695 to 2132 1 to 438   AAA Submitted on the opposite strand 438/438
(100 %)
9 diff
(98.0 %id)
H02646 placenta .d 1707 to 2133 1 to 438       438/442
(99 %)
23 diff
(94.8 %id)
AI167674 parathyroid gland, parathyroid tumor .d 1708 to 2134 431 to 6       426/431
(98 %)
0 diff
(100 %id)
CD677707 eye, Trabecular meshwork .d 1709 to 2131 1 to 423       423/423
(100 %)
0 diff
(100 %id)
BM090855 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .d 1714 to 2014 328 to 28   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 301/301
(100 %)
4 diff
(98.7 %id)
AI695553 colon .d 1715 to 2139 424 to 1       424/446
(95 %)
16 diff
(96.5 %id)
TI_151764692   .d 1716 to 2134 105 to 523       419/1288
(32 %)
8 diff
(99.4 %id)
AI335907 uterus .d 1717 to 2132 416 to 1       416/416
(100 %)
0 diff
(100 %id)
BE074542 breast .d 1718 to 2007 298 to 8     Submitted on the opposite strand 291/298
(97 %)
4 diff
(98.7 %id)
AI377478   .d 1718 to 2134 419 to 3       417/419
(99 %)
0 diff
(100 %id)
AA443946   .d 1719 to 2134 416 to 2       415/416
(99 %)
0 diff
(100 %id)
AA768408 germinal center B cell .d 1738 to 2132 411 to 31   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 381/381
(100 %)
6 diff
(98.5 %id)
BU676254 lung, Primary Lung Epithelial Cells .d 1739 to 2014 294 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 276/276
(100 %)
1 diff
(99.7 %id)
CN255815 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 1740 to 2005 1 to 266       266/266
(100 %)
0 diff
(100 %id)
AI274003 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 1750 to 2134 384 to 1       384/384
(100 %)
1 diff
(99.8 %id)
AA431454   .d 1758 to 2140 390 to 8       383/390
(98 %)
0 diff
(100 %id)
AA621404   .d 1763 to 2134 381 to 7       375/381
(98 %)
0 diff
(100 %id)
BF031441 hypernephroma, Kidney .d 1766 to 2485 1 to 706       706/801
(88 %)
37 diff
(95.4 %id)
AA593091 Prostate, prostatic intraepithelial neoplasia - highgrade .d 1773 to 2129 364 to 7       358/364
(98 %)
0 diff
(100 %id)
BU674476 lung, Primary Lung Epithelial Cells .d 1780 to 2135 371 to 16   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 356/356
(100 %)
6 diff
(98.4 %id)
BF727025 eye, lens .d 1781 to 2474 1 to 694   tiling clone,   694/694
(100 %)
0 diff
(100 %id)
AA127838 uterus .d 1781 to 2146 1 to 368       368/371
(99 %)
8 diff
(97.9 %id)
AA132208 uterus .d 1781 to 2249 1 to 471       471/471
(100 %)
2 diff
(99.6 %id)
AA807643 pooled germ cell tumors .d 1845 to 2134 295 to 6       290/295
(98 %)
0 diff
(100 %id)
BG527040 lung, mucoepidermoid carcinoma .d 1850 to 2487 1 to 641       641/741
(86 %)
20 diff
(97.4 %id)
BF701115 brain, primitive neuroectoderm .d 1851 to 2501 1 to 639       639/833
(76 %)
16 diff
(98.1 %id)
BF739818 Kidney .d 1855 to 2140 292 to 8       285/292
(97 %)
0 diff
(100 %id)
AA535949 colon .d 1876 to 2015 140 to 1       140/140
(100 %)
0 diff
(100 %id)
BU588560 mixed (pool of 40 RNAs) .d 1889 to 2014 1 to 126   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 126/126
(100 %)
2 diff
(98.5 %id)
DR979277 placenta .d 1913 to 2014 1 to 101   AAA Submitted on the opposite strand 101/101
(100 %)
6 diff
(94.1 %id)
BF698579 brain, primitive neuroectoderm .d 1917 to 2432 1 to 518       518/518
(100 %)
5 diff
(99.1 %id)
BF211337 bone marrow, from chronic myelogenous leukemia .d 1962 to 2573 1 to 621       621/698
(88 %)
32 diff
(95.5 %id)
BY999141   .d 1999 to 2134 1 to 136     Submitted on the opposite strand 136/137
(99 %)
2 diff
(98.6 %id)
D20477   .d 1999 to 2134 1 to 137     Submitted on the opposite strand 137/138
(99 %)
2 diff
(98.6 %id)
BF670512 muscle (skeletal) .d 2142 to 2776 1 to 633       633/865
(73 %)
61 diff
(93.0 %id)
BX423241 brain, fetal brain .d 2149 to 3230 1074 to 1       1074/1131
(94 %)
19 diff
(98.4 %id)
FN057120 breast carcinoma .d 2237 to 2344 108 to 1     Submitted on the opposite strand 108/108
(100 %)
0 diff
(100 %id)
CD101836 Blood vessels - aorta, basilar and artery .d 2246 to 2754 1 to 522       522/858
(60 %)
24 diff
(97.3 %id)
BG899036 cartilage .d 2273 to 2598 86 to 411       326/343
(95 %)
6 diff
(98.3 %id)
BX434530 brain, fetal brain .d 2340 to 3236 896 to 1   tiling clone,   896/896
(100 %)
13 diff
(98.6 %id)
BI334004 cervical carcinoma cell line, cervix .d 2402 to 3132 1 to 730       730/733
(99 %)
39 diff
(94.7 %id)
BX434142 placenta .d 2459 to 3223 778 to 1       778/898
(86 %)
41 diff
(95.5 %id)
TI_149282330   .d 2478 to 3240 882 to 124   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 759/1035
(73 %)
9 diff
(99.2 %id)
BG149717 carcinoid, lung .d 2490 to 2885 1 to 397     Submitted on the opposite strand 397/397
(100 %)
2 diff
(99.5 %id)
BF110249 carcinoid, lung .d 2490 to 2963 1 to 474     Submitted on the opposite strand 474/474
(100 %)
1 diff
(99.8 %id)
AA040621 uterus .d 2494 to 2895 1 to 404     Submitted on the opposite strand 404/405
(99 %)
3 diff
(99.3 %id)
BE551124 carcinoid, lung .d 2494 to 2756 1 to 263     Submitted on the opposite strand 263/263
(100 %)
4 diff
(98.5 %id)
R64534 placenta .d 2520 to 2890 1 to 374       374/377
(99 %)
5 diff
(98.7 %id)
BG548348 lung .d 2520 to 3144 1 to 626       626/626
(100 %)
5 diff
(99.3 %id)
FN074533 breast carcinoma .d 2547 to 2648 1 to 97       97/108
(89 %)
8 diff
(92.6 %id)
BU165730 testis .d 2574 to 3239 1 to 669       669/806
(83 %)
9 diff
(98.9 %id)
FN147891 breast carcinoma .d 2576 to 2690 111 to 1     Submitted on the opposite strand 111/118
(94 %)
3 diff
(97.5 %id)
BG925715 cartilage .d 2578 to 3213 81 to 716       636/648
(98 %)
6 diff
(99.1 %id)
BM983766 lung, Primary Lung Epithelial Cells .d 2586 to 3240 672 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 654/654
(100 %)
4 diff
(99.4 %id)
FN135404 breast carcinoma .d 2617 to 2696 79 to 1     Submitted on the opposite strand 79/79
(100 %)
1 diff
(98.8 %id)
FN054325 breast carcinoma .d 2657 to 2798 1 to 142       142/142
(100 %)
0 diff
(100 %id)
DB358372 whole embryo, mainly head .d 2661 to 3238 574 to 3       572/574
(99 %)
0 diff
(100 %id)
BX418370 brain, fetal brain .d 2679 to 3209 537 to 1       909/939
(96 %)
43 diff
(95.5 %id)
AW977767   .d 2688 to 3239 552 to 1     Submitted on the opposite strand 552/552
(100 %)
7 diff
(98.8 %id)
DB552784 hippocampus .d 2761 to 3238 1 to 478     Submitted on the opposite strand 478/480
(99 %)
2 diff
(99.6 %id)
N40203 multiple sclerosis lesions .d 2776 to 3240 475 to 1       475/481
(98 %)
15 diff
(96.9 %id)
FN141794 breast carcinoma .d 2796 to 2918 125 to 2     Submitted on the opposite strand 124/126
(98 %)
0 diff
(100 %id)
AA811265 germinal center B cell .d 2799 to 3247 460 to 12   tiling clone, AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 449/449
(100 %)
0 diff
(100 %id)
AI582161 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d 2805 to 3240 455 to 20   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 436/436
(100 %)
1 diff
(99.8 %id)
AA040620 uterus .d 2831 to 3240 463 to 52   AAA Submitted on the opposite strand 412/412
(100 %)
2 diff
(99.6 %id)
AA132065 uterus .d 2836 to 3240 408 to 1       408/437
(93 %)
5 diff
(98.9 %id)
FN073174 breast carcinoma .d 2842 to 2945 101 to 1     Submitted on the opposite strand 101/102
(99 %)
3 diff
(97.1 %id)
AW001618 Kidney .d 2847 to 3245 402 to 3       400/402
(99 %)
0 diff
(100 %id)
DB536554 hippocampus .d 2850 to 3240 19 to 411     Submitted on the opposite strand 393/411
(95 %)
14 diff
(96.6 %id)
AI222332 pooled .d 2866 to 3247 382 to 1       382/382
(100 %)
1 diff
(99.8 %id)
AI796277 Kidney .d 2871 to 3242 370 to 1       370/370
(100 %)
2 diff
(99.5 %id)
FN152265 breast carcinoma .d 2887 to 2985 97 to 1     Submitted on the opposite strand 97/98
(98 %)
2 diff
(98.0 %id)
BQ024390 placenta .d 2896 to 3240 363 to 19   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 345/345
(100 %)
0 diff
(100 %id)
AW886032 ovary .d 2913 to 3148 244 to 9       236/291
(81 %)
0 diff
(100 %id)
C21544   .d 2948 to 3240 1 to 293       293/293
(100 %)
0 diff
(100 %id)
AI626127 colon .d 3035 to 3240 225 to 20   AAA Possibly primed on the genome, locally A rich (14/16 A in genome downstream of last aligned base) 206/206
(100 %)
5 diff
(97.6 %id)
AW019878.
matches multiple genes
cochlea, ear .d 3064 to 3245 1 to 182     also hits gene GCFC1 182/184
(98 %)
6 diff
(96.8 %id)
Z25204 leg muscle, skeletal muscle .d 3066 to 3239 1 to 174       174/174
(100 %)
2 diff
(98.9 %id)
DB185090 liver, tumor tissue .e 1 to 568 2 to 570   tiling clone, capped   569/569
(100 %)
1 diff
(99.9 %id)
CA772577 Pancreas, Purified pancreatic islet .e 5 to 784 1 to 780 exact tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 780/780
(100 %)
5 diff
(99.4 %id)
BQ269248 Pancreas, Purified pancreatic islet .e 63 to 565 1 to 503   fully sequenced,   503/503
(100 %)
4 diff
(99.3 %id)
DB162141 thymus .e 76 to 655 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
CA771736 Pancreas, Purified pancreatic islet .e 204 to 789 591 to 5   fully sequenced, Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 587/591
(99 %)
0 diff
(100 %id)
AI418308 pooled .e 318 to 782 465 to 1       465/465
(100 %)
5 diff
(99.0 %id)
AA654812   .e 370 to 702 1 to 333       333/333
(100 %)
2 diff
(99.4 %id)
BQ285890 Pancreas, Purified pancreatic islet .e 535 to 791 257 to 1   fully sequenced,   257/257
(100 %)
0 diff
(100 %id)
DA006700   .f 1 to 572 2 to 574 D10G Y12L Q13P T14D S15K ... tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
BP310538 brain .g 1 to 588 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
BF213417 bone marrow, from acute myelogenous leukemia .g 61 to 657 1 to 590 L73W A74Q G75V P76Q M77W ...     590/875
(67 %)
20 diff
(97.8 %id)
BP276169 Kidney .g 66 to 615 1 to 549       549/581
(94 %)
6 diff
(99.0 %id)
DB193770 ovary, tumor tissue .g 66 to 626 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DB208282 trachea .g 79 to 616 2 to 540   capped   539/546
(98 %)
2 diff
(99.7 %id)
DA424520   .g 84 to 653 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
AV713741   Gene YIPF5, variant not shown         This clone was ignored    
AV661198 corresponding non cancerous liver tissue Gene YIPF5, variant not shown         Submitted on the opposite strand    
CD678669 eye, Trabecular meshwork Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
AV714350   Gene YIPF5, variant not shown         This clone was ignored    
BP307272 brain Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
BP307530 brain Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
AY640934   Gene YIPF5, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DC424156   Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
DB321707   Gene YIPF5, variant not shown         This clone was ignored    
DA651493   Gene YIPF5, variant not shown       capped This clone was ignored    
CD695794 normal nasopharynx Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
AK307251   Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
BF965857 Bone, osteosarcoma, cell line Gene YIPF5, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI