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Gene SLC9A7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
37 supporting clones for gene SLC9A7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CF593538 Human Placenta, placenta .a 1 to 746 25 to 774   tiling clone,   750/799
(93 %)
21 diff
(97.4 %id)
BC094742 Placenta, normal .a 5 to 2578 1 to 2573   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 2573/2573
(100 %)
4 diff
(99.9 %id)
AA215679 germinal center B cell .a 253 to 823 1 to 572     Submitted on the opposite strand 572/573
(99 %)
19 diff
(96.7 %id)
AI241084 Kidney .a 253 to 665 1 to 413     Submitted on the opposite strand 413/413
(100 %)
1 diff
(99.8 %id)
AI685285 pooled .a 253 to 870 1 to 618     Submitted on the opposite strand 618/618
(100 %)
3 diff
(99.6 %id)
AW664732 pooled .a 253 to 807 1 to 555     Submitted on the opposite strand 555/555
(100 %)
1 diff
(99.9 %id)
AA769118 germinal center B cell .a 307 to 667 1 to 361     Submitted on the opposite strand 361/361
(100 %)
4 diff
(98.9 %id)
AA278532 germinal center B cell .a 311 to 414 1 to 103     Submitted on the opposite strand 103/103
(100 %)
5 diff
(95.2 %id)
AA648924 germinal center B cell .a 323 to 840 1 to 517     Submitted on the opposite strand 517/517
(100 %)
4 diff
(99.3 %id)
AA810311 germinal center B cell .a 328 to 597 1 to 269     Submitted on the opposite strand 269/269
(100 %)
3 diff
(98.9 %id)
AA810583 germinal center B cell .a 331 to 738 1 to 403     Submitted on the opposite strand 403/403
(100 %)
5 diff
(98.8 %id)
DA028258   .a 523 to 1098 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
AI885510 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 524 to 879 1 to 356     Submitted on the opposite strand 356/356
(100 %)
1 diff
(99.8 %id)
AK056599 tongue .a 680 to 2586 1 to 1907   tiling clone, available from FLJ,   1907/1907
(100 %)
1 diff
(100.0 %id)
DA761335 tongue .a 681 to 1205 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
BP233600 coronary artery .a 886 to 1467 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CN264025 embryonic stem cells, cell lines H1, H7, andH9 .a 1498 to 2209 1 to 712       712/712
(100 %)
2 diff
(99.8 %id)
W47115 senescent fibroblast .a 1671 to 2099 1 to 434       434/434
(100 %)
8 diff
(98.2 %id)
BX112873 senescent fibroblast .a 1672 to 1823 1 to 155       155/156
(99 %)
7 diff
(95.6 %id)
BQ447812 Knee, Osteoarthritic Cartilage .a 1983 to 2595 613 to 1       613/613
(100 %)
2 diff
(99.7 %id)
BF061440 pooled .a 2047 to 2597 557 to 7   tiling clone,   551/557
(98 %)
0 diff
(100 %id)
DB325325 tongue .a 2050 to 2586 537 to 1       537/537
(100 %)
0 diff
(100 %id)
AA278194.
matches multiple genes
germinal center B cell .a 2065 to 2578 513 to 1     Submitted on the opposite strand, also hits gene PDIA5andSEC22A 513/513
(100 %)
2 diff
(99.7 %id)
BF752077 breast_normal .a 2123 to 2341 223 to 1     Submitted on the opposite strand 223/223
(100 %)
10 diff
(95.6 %id)
AW297646   .a 2125 to 2595 479 to 5       475/479
(99 %)
0 diff
(100 %id)
BF093907 uterus_tumor .a 2214 to 2630 428 to 10       419/430
(97 %)
0 diff
(100 %id)
W47116 senescent fibroblast .a 2222 to 2606 385 to 1       385/385
(100 %)
4 diff
(99.0 %id)
AF298591   .b 1 to 2200 1 to 2200 exact tiling clone,   2200/2200
(100 %)
0 diff
(100 %id)
NM_032591.1   .b 1 to 2200 1 to 2200 exact RefSeq,   2200/2200
(100 %)
0 diff
(100 %id)
AW817227 stomach .c 1 to 632 1 to 627 T6P L7F L8S I9L V10C ... tiling clone,   627/644
(97 %)
18 diff
(97.3 %id)
AW938113 denis_drash .c 214 to 715 514 to 13   tiling clone, Submitted on the opposite strand 502/516
(97 %)
5 diff
(99.1 %id)
BQ018779 lung, Metastatic Chondrosarcoma .d 1 to 716 733 to 15 G2X V3S E4R E5A P6L ... tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 716/747
(95 %)
7 diff
(99.1 %id)
AW749645 breast .d 327 to 646 463 to 143   tiling clone,   321/463
(69 %)
1 diff
(99.8 %id)
AI378153 B-cell, chronic lymphotic leukemia .e 1 to 491 491 to 1   tiling clone,   491/491
(100 %)
2 diff
(99.6 %id)
CF272707   .e 350 to 799 450 to 1   tiling clone, Submitted on the opposite strand 450/450
(100 %)
1 diff
(99.8 %id)
AA279477 germinal center B cell .e 637 to 1075 442 to 6 C12A G13D F14L T15Q G16V ... tiling clone, Submitted on the opposite strand 437/442
(98 %)
1 diff
(99.8 %id)
AA832156 germinal center B cell .f-u 1 to 278 361 to 85 exact tiling clone, AAA   277/344
(80 %)
0 diff
(100 %id)
AA662537 normal prostate, Prostate Gene SLC9A7, variant not shown         Suspected internal deletion, this clone was ignored    
DB327704   Gene SLC9A7, variant not shown         This clone was ignored    
DA817177   Gene SLC9A7, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI