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Gene MRPS6andSLC5A3andC21orf82TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
544 supporting clones for gene MRPS6andSLC5A3andC21orf82 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AX750578   .a 1 to 10294 1 to 10297 exact tiling clone,   10297/10302
(99 %)
37 diff
(99.7 %id)
NM_006933.4   .a 1 to 11579 1 to 11579 exact RefSeq,   11579/11579
(100 %)
3 diff
(100.0 %id)
DA723865   .a 8 to 534 2 to 527   tiling clone, capped   526/526
(100 %)
3 diff
(99.5 %id)
DA511408 brain .a 9 to 570 2 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DA510954 brain .a 10 to 590 2 to 580   capped   579/579
(100 %)
3 diff
(99.5 %id)
DA570729 whole embryo, mainly head .a 10 to 824 2 to 814   capped   813/813
(100 %)
8 diff
(99.1 %id)
AX750579   .a 513 to 2669 1 to 2157 exact     2157/2157
(100 %)
0 diff
(100 %id)
CV391258 nervous_normal .a 646 to 1162 14 to 533       520/533
(97 %)
6 diff
(98.9 %id)
BF375312 stomach .a 1077 to 1377 20 to 320       301/369
(81 %)
15 diff
(96.0 %id)
BE089541 breast .a 1175 to 1522 1 to 348       348/348
(100 %)
10 diff
(97.2 %id)
BP290336 lung .a 1227 to 1752 1 to 526       526/534
(98 %)
4 diff
(99.3 %id)
BM839239 Ascites, stomach .a 1288 to 1803 1 to 515       515/515
(100 %)
4 diff
(99.3 %id)
DA570585 whole embryo, mainly head .a 1506 to 2161 2 to 657   capped   656/699
(93 %)
3 diff
(99.6 %id)
AA157355 Pancreas .a 2021 to 2084 1 to 64       64/64
(100 %)
0 diff
(100 %id)
BF507722   .a 2064 to 2238 11 to 185     Submitted on the opposite strand 175/185
(94 %)
6 diff
(96.8 %id)
AL833562 human amygdala .a 2443 to 8629 1 to 6189   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 6189/6189
(100 %)
13 diff
(99.8 %id)
CN303345 embryonic stem cells, cell lines H1, H7, andH9 .a 2692 to 3423 1 to 735       735/735
(100 %)
9 diff
(98.8 %id)
CA392094 eye, RPE/choroid .a 3233 to 3702 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
X83558 fetal brain .a 3866 to 4950 1 to 1087       1087/1091
(99 %)
24 diff
(97.9 %id)
M78393   .a 3870 to 4248 1 to 382       382/382
(100 %)
3 diff
(99.3 %id)
BM562952 duodenal adenocarcinoma, cell line, small intestine .a 3994 to 4941 1 to 951       951/1058
(89 %)
27 diff
(97.5 %id)
FN126445 breast carcinoma .a 4358 to 4446 1 to 88       88/88
(100 %)
4 diff
(95.5 %id)
DA496842 brain .a 4464 to 5035 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
DA736946   .a 4584 to 5398 2 to 819   tiling clone, capped   818/818
(100 %)
13 diff
(98.5 %id)
DA320522 hippocampus .a 4773 to 5218 2 to 448   capped   447/447
(100 %)
3 diff
(99.4 %id)
AL700649 human skeletal muscle .a 4966 to 5445 1 to 480       480/480
(100 %)
2 diff
(99.6 %id)
DB238031 trachea .a 5216 to 5806 2 to 593   capped   592/592
(100 %)
1 diff
(99.9 %id)
BX498679 Liver .a 5321 to 5865 1 to 545       545/545
(100 %)
3 diff
(99.5 %id)
DA783014 brain .a 5711 to 6283 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA158634 amygdala .a 5714 to 6222 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
DA859190 placenta .a 5755 to 6296 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
AA489889   .a 5776 to 6195 1 to 420       420/420
(100 %)
1 diff
(99.8 %id)
AK092248   .a 6010 to 8628 1 to 2619   available from FLJ,   2619/2620
(99 %)
5 diff
(99.9 %id)
DA741739   .a 6011 to 6530 2 to 523   capped   522/522
(100 %)
2 diff
(99.7 %id)
BG569470 Liver .a 6310 to 7087 1 to 772       772/801
(96 %)
13 diff
(98.4 %id)
DA484176 brain .a 6399 to 6869 2 to 472   capped   471/471
(100 %)
0 diff
(100 %id)
CD250640 Blood vessels - aorta, basilar and artery .a 6414 to 7131 1 to 725       725/731
(99 %)
13 diff
(98.3 %id)
Z45933 brain, total brain .a 6439 to 6728 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
BM472758 duodenal adenocarcinoma, cell line, small intestine .a 6481 to 7378 1 to 917       917/1002
(91 %)
24 diff
(97.7 %id)
D53651   .a 6499 to 6977 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
DN912120   .a 6526 to 7186 1 to 661       661/662
(99 %)
3 diff
(99.6 %id)
DA568042 whole embryo, mainly head .a 6661 to 7370 2 to 719   capped   718/722
(99 %)
13 diff
(98.2 %id)
CN303347 embryonic stem cells, DMSO-treated H9 cellline .a 6663 to 7189 1 to 527       527/527
(100 %)
0 diff
(100 %id)
DA812113 ovary, tumor tissue .a 6674 to 7352 2 to 679   capped   678/678
(100 %)
2 diff
(99.8 %id)
DB165905 thyroid gland .a 6692 to 7431 2 to 738   capped   737/738
(99 %)
8 diff
(99.0 %id)
DA819081   .a 6786 to 7339 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA063300 cerebellum .a 6831 to 7389 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA330244 hippocampus .a 6833 to 7291 2 to 461   capped   460/460
(100 %)
1 diff
(99.8 %id)
BG287582 bladder, transitional cell papilloma, cell line .a 6890 to 7536 1 to 646       646/927
(69 %)
9 diff
(99.1 %id)
DA568625 whole embryo, mainly head .a 6938 to 7799 2 to 856   capped   855/875
(97 %)
19 diff
(97.9 %id)
DA358215 subthalamic nucleus .a 6952 to 7521 2 to 573   capped   572/572
(100 %)
4 diff
(99.4 %id)
BE177668 head_neck .a 7101 to 7728 2 to 625       624/625
(99 %)
6 diff
(99.1 %id)
DA327694 hippocampus .a 7189 to 7662 2 to 474   capped   473/473
(100 %)
2 diff
(99.6 %id)
DA307192 hippocampus .a 7284 to 7745 2 to 464   capped   463/463
(100 %)
2 diff
(99.6 %id)
BQ232870 large cell carcinoma, lung .a 7367 to 8371 1 to 1008   tiling clone,   1008/1048
(96 %)
19 diff
(98.2 %id)
F05432 brain, total brain .a 7388 to 7622 1 to 234       234/234
(100 %)
4 diff
(98.3 %id)
Z44108 brain, total brain .a 7388 to 7718 1 to 331       331/331
(100 %)
3 diff
(99.1 %id)
F11694 brain, total brain .a 7388 to 7686 1 to 300       300/300
(100 %)
10 diff
(96.7 %id)
AW955106   .a 7421 to 8050 1 to 627       627/627
(100 %)
13 diff
(98.0 %id)
BG993944 head_neck .a 7479 to 7638 159 to 3       157/189
(83 %)
0 diff
(100 %id)
CA392093 eye, RPE/choroid .a 7519 to 8029 527 to 17   AAA   511/511
(100 %)
8 diff
(98.5 %id)
FN148557 breast carcinoma .a 7608 to 7715 107 to 1     Submitted on the opposite strand 107/107
(100 %)
1 diff
(99.1 %id)
DB064440 testis .a 7638 to 8205 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BI494523 cochlea, ear .a 7676 to 8038 1 to 363   fully sequenced,   363/363
(100 %)
5 diff
(98.7 %id)
BF381997 brain, primitive neuroectoderm .a 7681 to 8430 1 to 741       741/802
(92 %)
33 diff
(95.9 %id)
W72666 heart .a 7752 to 8277 1 to 538     Submitted on the opposite strand 538/584
(92 %)
18 diff
(97.0 %id)
BG254534 adenocarcinoma, cell line, Prostate .a 7776 to 8515 1 to 745       745/1252
(59 %)
19 diff
(98.5 %id)
AI871766 carcinoid, lung .a 7785 to 8277 1 to 493     Submitted on the opposite strand 493/493
(100 %)
0 diff
(100 %id)
DA756696   .a 7807 to 8322 2 to 517   capped   516/516
(100 %)
3 diff
(99.5 %id)
AW770731 carcinoid, lung .a 7809 to 8255 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
DB288068 uterus .a 7820 to 8379 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
FN088614 breast carcinoma .a 7828 to 7927 99 to 1     Submitted on the opposite strand 99/99
(100 %)
2 diff
(98.0 %id)
DA213959 brain .a 7865 to 8397 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DB217312 trachea .a 7891 to 8455 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DA211956 brain .a 7996 to 8547 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BI494522 cochlea, ear .a 8008 to 8646 639 to 1   fully sequenced,   639/639
(100 %)
3 diff
(99.6 %id)
DN912121   .a 8045 to 8620 576 to 1       576/576
(100 %)
2 diff
(99.7 %id)
BF195231 carcinoid, lung .a 8049 to 8320 17 to 288     Submitted on the opposite strand 272/288
(94 %)
6 diff
(98.0 %id)
DN919191   .a 8069 to 8549 498 to 18       481/498
(96 %)
0 diff
(100 %id)
BX118830 placenta .a 8073 to 8629 1 to 556   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 556/556
(100 %)
1 diff
(99.9 %id)
DB142970 thymus .a 8075 to 8536 2 to 463   capped   462/462
(100 %)
1 diff
(99.8 %id)
DB354504 whole embryo, mainly head .a 8076 to 8629 556 to 1       556/556
(100 %)
10 diff
(98.3 %id)
DB350427 trachea .a 8076 to 8629 555 to 1       555/555
(100 %)
1 diff
(99.9 %id)
DB355157 whole embryo, mainly head .a 8081 to 8629 549 to 1       549/552
(99 %)
6 diff
(99.0 %id)
DB381758 thyroid gland .a 8081 to 8629 547 to 1       547/552
(99 %)
11 diff
(98.1 %id)
DB315672 brain .a 8082 to 8629 552 to 1       552/552
(100 %)
4 diff
(99.3 %id)
DB369516   .a 8085 to 8629 548 to 1       548/549
(99 %)
19 diff
(96.6 %id)
DB371415 ovary, tumor tissue .a 8085 to 8629 548 to 1       548/592
(92 %)
10 diff
(98.4 %id)
DB297136 cerebellum .a 8096 to 8629 536 to 1       536/536
(100 %)
2 diff
(99.7 %id)
BG056536 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .a 8096 to 8630 535 to 1       535/535
(100 %)
1 diff
(99.9 %id)
DA802624 brain .a 8135 to 8679 2 to 546   tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
DA802687 brain .a 8135 to 8688 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
AI867198 Kidney .a 8149 to 8629 481 to 1       484/484
(100 %)
0 diff
(100 %id)
DA218790 brain .a 8159 to 8707 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DB357367 whole embryo, mainly head .a 8160 to 8629 471 to 1       471/471
(100 %)
10 diff
(97.9 %id)
FN112805 breast carcinoma .a 8197 to 8262 66 to 1     Submitted on the opposite strand 66/66
(100 %)
0 diff
(100 %id)
BF509918   .a 8207 to 8629 440 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 423/424
(99 %)
1 diff
(99.8 %id)
W76424 heart .a 8208 to 8629 431 to 1     Submitted on the opposite strand 431/436
(98 %)
10 diff
(97.8 %id)
AW104950 pooled .a 8210 to 8633 424 to 1       424/424
(100 %)
0 diff
(100 %id)
AI244880 Kidney .a 8212 to 8629 418 to 1       418/418
(100 %)
2 diff
(99.6 %id)
DB139884 thymus .a 8215 to 8724 2 to 513   capped   512/512
(100 %)
1 diff
(99.9 %id)
AW241378 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .a 8227 to 8630 404 to 1       404/404
(100 %)
0 diff
(100 %id)
AI640590 Kidney .a 8238 to 8764 530 to 2       529/530
(99 %)
0 diff
(100 %id)
DA407558 thalamus .a 8241 to 8796 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA503769 brain .a 8244 to 8779 2 to 539   capped   538/538
(100 %)
1 diff
(99.9 %id)
AA490044   .a 8251 to 8628 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AI991426 Kidney .a 8270 to 8629 360 to 1       360/360
(100 %)
0 diff
(100 %id)
AI399928 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 8287 to 8767 482 to 1       482/482
(100 %)
1 diff
(99.8 %id)
Z40123 brain, total brain .a 8313 to 8629 317 to 1       317/317
(100 %)
0 diff
(100 %id)
F09353 brain, total brain .a 8315 to 8629 315 to 1       315/315
(100 %)
0 diff
(100 %id)
CA390529 eye, RPE/choroid .a 8322 to 8871 1 to 550       550/550
(100 %)
0 diff
(100 %id)
F01696 brain, total brain .a 8338 to 8629 292 to 1       292/292
(100 %)
0 diff
(100 %id)
DA122569 cerebellum .a 8339 to 8860 2 to 524   capped   523/523
(100 %)
3 diff
(99.5 %id)
FN067469 breast carcinoma .a 8343 to 8396 54 to 1     Submitted on the opposite strand 54/55
(98 %)
0 diff
(100 %id)
DA518317 brain .a 8350 to 8900 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA144213 amygdala .a 8376 to 8943 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
FN126592 breast carcinoma .a 8379 to 8475 100 to 1     Submitted on the opposite strand 100/101
(99 %)
3 diff
(97.1 %id)
CN303346 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 8407 to 9062 1 to 657       657/657
(100 %)
1 diff
(99.9 %id)
F04791 brain, total brain .a 8418 to 8629 213 to 2       212/213
(99 %)
0 diff
(100 %id)
D60544   .a 8419 to 8629 211 to 1       211/212
(99 %)
3 diff
(98.6 %id)
AA523328 metastatic prostate bone lesion .a 8446 to 8635 190 to 1       190/197
(96 %)
3 diff
(98.5 %id)
FN151730 breast carcinoma .a 8462 to 8541 81 to 2     Submitted on the opposite strand 80/81
(98 %)
0 diff
(100 %id)
DA779905 brain .a 8526 to 9101 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA513521 brain .a 8540 to 9098 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA781695 brain .a 8541 to 9107 2 to 571   capped   570/570
(100 %)
3 diff
(99.5 %id)
DR158454 human embryonic stem cells differentiated toan early endodermal cell type .a 8599 to 9392 1 to 794   tiling clone,   794/794
(100 %)
0 diff
(100 %id)
W16611 lung .a 8686 to 9154 1 to 465       465/489
(95 %)
10 diff
(98.0 %id)
DA654217   .a 8717 to 9307 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DA781802 brain .a 8754 to 9344 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA010309 adrenal gland .a 8816 to 9363 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
BX505522   .a 8908 to 9578 1 to 672       672/672
(100 %)
2 diff
(99.8 %id)
BM457528 embryonal carcinoma, cell line, testis .a 8990 to 9662 11 to 683       673/1182
(56 %)
23 diff
(98.1 %id)
AA621183   .a 9045 to 9492 461 to 14   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 448/448
(100 %)
0 diff
(100 %id)
CD653745 Embryonic Stem cells .a 9092 to 9929 3 to 837       835/839
(99 %)
6 diff
(99.3 %id)
DA629555 Kidney .a 9147 to 9682 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BQ228934 melanotic melanoma, skin .a 9212 to 9972 1 to 771   AAA   771/869
(88 %)
23 diff
(97.4 %id)
CN314471 embryonic stem cells, cell lines H1, H7, andH9 .a 9216 to 9855 1 to 641       641/641
(100 %)
3 diff
(99.6 %id)
AA449060   .a 9317 to 9886 1 to 570     Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 570/570
(100 %)
0 diff
(100 %id)
AW373631 breast .a 9340 to 9936 599 to 3       597/631
(94 %)
0 diff
(100 %id)
AW373773 breast .a 9340 to 9924 585 to 3       583/595
(97 %)
0 diff
(100 %id)
DB166016 thyroid gland .a 9391 to 10159 2 to 770   tiling clone, capped   769/849
(90 %)
6 diff
(99.3 %id)
DA155301 amygdala .a 9415 to 9986 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AA570382 Schwannoma tumor .a 9447 to 9766 1 to 320     Submitted on the opposite strand 320/320
(100 %)
0 diff
(100 %id)
AB074183   .a 9499 to 11576 1 to 2078   tiling clone,   2078/2081
(99 %)
2 diff
(100.0 %id)
AU253668 neuroblastoma .a 9499 to 10150 49 to 700       652/687
(94 %)
6 diff
(99.2 %id)
BQ722584 sympathetic trunk .a 9538 to 10431 1 to 901       901/981
(91 %)
31 diff
(96.9 %id)
BE696753 colon .a 9562 to 9744 185 to 6       180/185
(97 %)
0 diff
(100 %id)
BE696754 colon .a 9562 to 9754 198 to 5       194/198
(97 %)
0 diff
(100 %id)
BF375832 testis_normal .a 9562 to 9741 184 to 6       179/184
(97 %)
0 diff
(100 %id)
CB959259 Pooled-Glandular .a 9600 to 10249 1 to 657   AAA   657/794
(82 %)
9 diff
(98.9 %id)
Z41910 brain, total brain .a 9615 to 9898 1 to 284       284/284
(100 %)
2 diff
(99.3 %id)
BG286986 bladder, transitional cell papilloma, cell line .a 9672 to 10363 1 to 695       695/978
(71 %)
12 diff
(98.8 %id)
BE708320 head_neck .a 9711 to 9878 1 to 168       168/168
(100 %)
0 diff
(100 %id)
AK024896 colon .a 9712 to 11573 1 to 1862   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1862/1862
(100 %)
2 diff
(99.9 %id)
DB023687 testis .a 9740 to 10282 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
CD109106 brain, Pituitary .a 9891 to 10665 26 to 803       778/871
(89 %)
16 diff
(98.2 %id)
BF826559 head_normal .a 9932 to 10286 356 to 3     Submitted on the opposite strand 354/358
(98 %)
0 diff
(100 %id)
BF826571 head_normal .a 9932 to 10248 331 to 14     Submitted on the opposite strand 318/333
(95 %)
0 diff
(100 %id)
BF826626 head_normal .a 9932 to 10278 353 to 8     Submitted on the opposite strand 346/355
(97 %)
0 diff
(100 %id)
BF826630 head_normal .a 9932 to 10238 308 to 2     Submitted on the opposite strand 307/310
(99 %)
0 diff
(100 %id)
BF826733 head_normal .a 9932 to 10055 134 to 14     Submitted on the opposite strand 121/136
(88 %)
0 diff
(100 %id)
BF826737 head_normal .a 9932 to 10181 250 to 4     Submitted on the opposite strand 247/253
(97 %)
0 diff
(100 %id)
BF827757 head_normal .a 9932 to 10181 254 to 6     Submitted on the opposite strand 249/256
(97 %)
0 diff
(100 %id)
BF827760 head_normal .a 9932 to 10236 305 to 1     Submitted on the opposite strand 305/307
(99 %)
0 diff
(100 %id)
BF834652 head_neck .a 9932 to 10180 255 to 6     Submitted on the opposite strand 250/257
(97 %)
0 diff
(100 %id)
BF834658 head_neck .a 9932 to 10246 321 to 4     Submitted on the opposite strand 318/323
(98 %)
0 diff
(100 %id)
BF834664 head_neck .a 9932 to 10278 351 to 7     Submitted on the opposite strand 345/353
(97 %)
0 diff
(100 %id)
BF836814 head_neck .a 9932 to 10164 284 to 49     Submitted on the opposite strand 236/286
(82 %)
0 diff
(100 %id)
BF836819 head_neck .a 9932 to 10196 271 to 7     Submitted on the opposite strand 265/273
(97 %)
0 diff
(100 %id)
BF836828 head_neck .a 9932 to 10248 322 to 6     Submitted on the opposite strand 317/324
(97 %)
0 diff
(100 %id)
BF879147 lung_tumor .a 9932 to 10148 220 to 3     Submitted on the opposite strand 218/222
(98 %)
0 diff
(100 %id)
BQ354397 head_neck .a 9932 to 10245 365 to 48       318/367
(86 %)
0 diff
(100 %id)
BQ354398 head_neck .a 9932 to 10278 354 to 4       351/356
(98 %)
0 diff
(100 %id)
BF834663 head_neck .a 9935 to 10156 250 to 29     Submitted on the opposite strand 222/250
(88 %)
8 diff
(96.8 %id)
BF834660 head_neck .a 9957 to 10273 1 to 318       318/318
(100 %)
2 diff
(99.4 %id)
CD357148 Blood vessels - aorta, basilar and artery .a 10069 to 10796 1 to 738       738/747
(98 %)
16 diff
(97.9 %id)
AK026169   .a 10077 to 11573 1 to 1496   available from FLJ, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1496/1496
(100 %)
5 diff
(99.7 %id)
BM705661 eye, lens .a 10127 to 10492 1 to 366     Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 366/366
(100 %)
0 diff
(100 %id)
FN096158 breast carcinoma .a 10163 to 10252 88 to 1     Submitted on the opposite strand 88/89
(98 %)
3 diff
(96.7 %id)
ES316282 pool of melanoma cell lines .a 10177 to 10698 67 to 587       521/587
(88 %)
4 diff
(99.4 %id)
CD299220 Blood vessels - aorta, basilar and artery .a 10206 to 10926 1 to 729       729/821
(88 %)
20 diff
(97.6 %id)
DN912062   .a 10223 to 10893 1 to 671       671/671
(100 %)
3 diff
(99.6 %id)
BU156601 eye, retinoblastoma .a 10282 to 11157 1 to 886       886/889
(99 %)
17 diff
(98.1 %id)
BG426564 Kidney .a 10432 to 11188 1 to 758       758/878
(86 %)
33 diff
(96.3 %id)
BM083590 Kidney .a 10433 to 10995 1 to 563       563/563
(100 %)
3 diff
(99.5 %id)
AA029258.
matches multiple genes
uterus .a 10437 to 10609 1 to 173     also hits gene ORMDL3 173/173
(100 %)
0 diff
(100 %id)
BQ014703 Chondrosarcoma, Left Pubic Bone .a 10568 to 11345 794 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 776/776
(100 %)
3 diff
(99.7 %id)
CD356074 Blood vessels - aorta, basilar and artery .a 10576 to 11244 1 to 676       676/759
(89 %)
18 diff
(97.7 %id)
FN061057 breast carcinoma .a 10584 to 10650 67 to 1     Submitted on the opposite strand 67/68
(98 %)
1 diff
(98.6 %id)
CA313245 Human Lung Epithelial cells, lung .a 10601 to 11327 732 to 5       728/742
(98 %)
0 diff
(100 %id)
AW770987 carcinoid, lung .a 10631 to 11020 1 to 390     Submitted on the opposite strand 390/390
(100 %)
2 diff
(99.5 %id)
CD104043 Pooled-Skin .a 10660 to 11391 1 to 737       737/785
(93 %)
14 diff
(98.3 %id)
BF033754 adenocarcinoma, ovary .a 10670 to 11319 1 to 650       650/811
(80 %)
10 diff
(98.8 %id)
FN087493 breast carcinoma .a 10788 to 10893 1 to 109       109/109
(100 %)
3 diff
(97.3 %id)
TI_157612844   .a 10817 to 11573 862 to 108   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 755/755
(100 %)
13 diff
(98.3 %id)
CD675371 eye, lens .a 10861 to 11471 611 to 1     Submitted on the opposite strand 611/611
(100 %)
0 diff
(100 %id)
DA831126 placenta .a 10875 to 11575 2 to 702   fully sequenced, capped   701/701
(100 %)
15 diff
(97.9 %id)
BM997002 Chondrosarcoma, Left Pubic Bone .a 10890 to 11573 701 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 683/683
(100 %)
4 diff
(99.5 %id)
BQ003126 Chondrosarcoma, Left Pelvis .a 10910 to 11573 682 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 664/664
(100 %)
1 diff
(99.9 %id)
BG401754 Kidney .a 10941 to 11573 1 to 626       626/777
(80 %)
16 diff
(98.0 %id)
CV414315 testis_normal .a 10946 to 11224 1 to 284       284/284
(100 %)
24 diff
(91.6 %id)
FN048913 breast carcinoma .a 10964 to 11025 62 to 1     Submitted on the opposite strand 62/62
(100 %)
0 diff
(100 %id)
CB250671 Human Lung Epithelial cells, lung .a 10996 to 11573 597 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 579/579
(100 %)
1 diff
(99.9 %id)
DB320792 Kidney .a 11006 to 11573 569 to 1       569/569
(100 %)
1 diff
(99.9 %id)
BU734941 eye, lens .a 11015 to 11573 577 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 559/565
(98 %)
0 diff
(100 %id)
DN912061   .a 11023 to 11559 537 to 1       537/537
(100 %)
0 diff
(100 %id)
DB381922 thyroid gland .a 11023 to 11573 549 to 1       549/549
(100 %)
7 diff
(98.8 %id)
AI935495 Kidney .a 11035 to 11573 539 to 1       539/539
(100 %)
0 diff
(100 %id)
AI819745 2 pooled tumors (clear cell type), Kidney .a 11041 to 11574 538 to 3       536/538
(99 %)
0 diff
(100 %id)
BE858479 brain, glioblastoma (pooled) .a 11046 to 11572 529 to 3       527/529
(99 %)
0 diff
(100 %id)
BE349513 malignant melanoma, metastatic to lymphnode, skin .a 11054 to 11573 520 to 1       520/520
(100 %)
1 diff
(99.9 %id)
BF431203 Kidney .a 11055 to 11566 511 to 1       511/511
(100 %)
1 diff
(99.9 %id)
TI_149279655   .a 11057 to 11573 59 to 575   AAA Submitted on the opposite strand 517/575
(89 %)
4 diff
(99.4 %id)
BF939562 brain, glioblastoma (pooled) .a 11058 to 11565 508 to 1       508/508
(100 %)
0 diff
(100 %id)
BM969678 lung, Primary Lung Epithelial Cells .a 11059 to 11573 1 to 515   AAA Submitted on the opposite strand 515/515
(100 %)
2 diff
(99.7 %id)
CA314093 Human Lung Epithelial cells, lung .a 11059 to 11573 1 to 515   AAA Submitted on the opposite strand 515/515
(100 %)
2 diff
(99.7 %id)
CA311809 Human Lung Epithelial cells, lung .a 11059 to 11573 1 to 515   AAA Submitted on the opposite strand 515/515
(100 %)
2 diff
(99.7 %id)
AI422744 brain, glioblastoma (pooled) .a 11065 to 11573 509 to 1       509/509
(100 %)
0 diff
(100 %id)
AI423415 brain, glioblastoma (pooled) .a 11065 to 11565 501 to 1       501/501
(100 %)
0 diff
(100 %id)
AW771111 colon, juvenile granulosa tumor .a 11068 to 11556 489 to 1       489/489
(100 %)
1 diff
(99.8 %id)
BG054840 brain, glioblastoma (pooled) .a 11069 to 11573 505 to 1       505/505
(100 %)
0 diff
(100 %id)
AI140447 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 11080 to 11573 494 to 1       494/494
(100 %)
2 diff
(99.6 %id)
BG285457 bladder, transitional cell papilloma, cell line .a 11080 to 11573 1 to 490   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 490/490
(100 %)
6 diff
(98.8 %id)
BF509654   .a 11082 to 11573 509 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 492/492
(100 %)
1 diff
(99.8 %id)
AI332649 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 11088 to 11573 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AI969550 malignant melanoma, metastatic to lymphnode, skin .a 11088 to 11574 490 to 4       487/490
(99 %)
0 diff
(100 %id)
BX105035 whole brain .a 11089 to 11572 498 to 15   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 484/484
(100 %)
2 diff
(99.6 %id)
FN161487 breast carcinoma .a 11106 to 11215 1 to 106       106/108
(98 %)
5 diff
(95.4 %id)
AI942442 anaplastic oligodendroglioma, brain .a 11112 to 11573 476 to 15   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 462/462
(100 %)
0 diff
(100 %id)
AI199841 placenta .a 11118 to 11574 458 to 2       457/458
(99 %)
0 diff
(100 %id)
AI129261 uterus .a 11119 to 11573 455 to 1       455/455
(100 %)
0 diff
(100 %id)
AI422431 brain, glioblastoma (pooled) .a 11119 to 11574 457 to 2       456/457
(99 %)
0 diff
(100 %id)
AI140453 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 11122 to 11573 452 to 1       452/452
(100 %)
0 diff
(100 %id)
AI419482 brain, glioblastoma (pooled) .a 11122 to 11565 444 to 1       444/444
(100 %)
0 diff
(100 %id)
AI050878 brain, glioblastoma (pooled) .a 11125 to 11574 450 to 1       450/450
(100 %)
0 diff
(100 %id)
AI080121 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 11138 to 11573 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AI280479 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 11145 to 11573 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AI423608 brain, glioblastoma (pooled) .a 11162 to 11565 403 to 1       403/403
(100 %)
1 diff
(99.8 %id)
AI372882 uterus .a 11172 to 11573 415 to 14   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 402/402
(100 %)
0 diff
(100 %id)
CA393235 eye, RPE/choroid .a 11175 to 11573 1 to 399   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 399/399
(100 %)
1 diff
(99.8 %id)
AA678475   .a 11187 to 11573 387 to 1       387/387
(100 %)
0 diff
(100 %id)
AI221599 placenta .a 11203 to 11574 373 to 2       372/373
(99 %)
0 diff
(100 %id)
BE551776 pooled germ cell tumors .a 11207 to 11570 368 to 4       365/368
(99 %)
0 diff
(100 %id)
AA807943 normal prostate, Prostate .a 11208 to 11573 399 to 34   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 366/366
(100 %)
0 diff
(100 %id)
N79574 lung .a 11212 to 11576 365 to 1       365/365
(100 %)
0 diff
(100 %id)
AI375330 brain, glioblastoma (pooled) .a 11219 to 11565 347 to 1       347/347
(100 %)
0 diff
(100 %id)
AA449772   .a 11233 to 11573 351 to 11   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 341/341
(100 %)
0 diff
(100 %id)
AI094106 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 11243 to 11573 344 to 14   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 331/331
(100 %)
0 diff
(100 %id)
AW627793 2 pooled high-grade transitional celltumors, genitourinary tract .a 11249 to 11573 354 to 29   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 326/326
(100 %)
2 diff
(99.4 %id)
DB376630 placenta .a 11267 to 11575 305 to 1   fully sequenced,   305/305
(100 %)
0 diff
(100 %id)
AI014757 germ cell tumor .a 11323 to 11573 251 to 1       251/251
(100 %)
0 diff
(100 %id)
BE245261 leukopheresis .a 11365 to 11574 212 to 3       210/212
(99 %)
0 diff
(100 %id)
T24879   .a 11382 to 11563 179 to 1       179/179
(100 %)
9 diff
(95.0 %id)
Z38205 brain, total brain .a 11391 to 11573 184 to 1       184/184
(100 %)
1 diff
(99.5 %id)
AI540756 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 11401 to 11573 173 to 1       173/174
(99 %)
0 diff
(100 %id)
TI_154110336   .b 1 to 951 973 to 35 G2M A5L L6S M7W G8* tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 939/985
(95 %)
19 diff
(98.1 %id)
BG759899 B-cells, primary B-cells from tonsils (cell line) .c 1 to 605 33 to 637 exact tiling clone,   605/638
(94 %)
7 diff
(99.0 %id)
TI_57166238   .d 1 to 823 27 to 847 exact tiling clone,   821/847
(96 %)
14 diff
(98.4 %id)
AY061855   .d 5 to 994 1 to 990 exact tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 990/990
(100 %)
1 diff
(99.9 %id)
BI835068 pooled pancreas and spleen .d 5 to 823 1 to 817 exact     817/817
(100 %)
10 diff
(98.8 %id)
NM_032476.3   .d 5 to 994 1 to 990 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 990/990
(100 %)
0 diff
(100 %id)
DB484286 hypothalamus .d 9 to 454 1 to 446       446/446
(100 %)
0 diff
(100 %id)
DB487590 hypothalamus .d 9 to 450 1 to 442       442/442
(100 %)
1 diff
(99.8 %id)
DB495285 hypothalamus .d 9 to 497 1 to 489       489/489
(100 %)
3 diff
(99.4 %id)
CB128613 Liver .d 29 to 566 1 to 538 exact     538/538
(100 %)
0 diff
(100 %id)
BM563952 blood, natural killer cells, cell line .d 45 to 961 1 to 927 exact     927/1160
(79 %)
30 diff
(97.5 %id)
TI_45209084   .d 54 to 944 87 to 977 exact     891/1022
(87 %)
20 diff
(98.1 %id)
TI_44343522   .d 54 to 880 121 to 947 P97H E104N C105V E106K I108L ...     827/947
(87 %)
17 diff
(98.3 %id)
BG714495 brain, hypothalamus .d 55 to 856 1 to 801 P97H E104N C105V E106K I108L ...     801/802
(99 %)
10 diff
(98.8 %id)
BG714571 brain, hypothalamus .d 55 to 804 1 to 757 exact     757/757
(100 %)
19 diff
(97.5 %id)
BG706954 brain, hypothalamus .d 55 to 740 1 to 685 exact     685/686
(99 %)
4 diff
(99.5 %id)
BG714757 brain, hypothalamus .d 55 to 884 1 to 829 I93X     829/830
(99 %)
16 diff
(98.1 %id)
BG709078 brain, hypothalamus .d 55 to 875 1 to 820 R90T G91R N92E I93Y V94C ...     820/824
(99 %)
12 diff
(98.6 %id)
BG715315 brain, hypothalamus .d 55 to 757 1 to 704 exact     704/707
(99 %)
7 diff
(99.1 %id)
BG703468 brain, hippocampus .d 55 to 917 1 to 856 P16T K116T L117I Y118I S119F ...     856/882
(97 %)
21 diff
(97.7 %id)
BG720377 testis .d 55 to 733 1 to 679 exact     679/679
(100 %)
2 diff
(99.8 %id)
BI596656 brain, hypothalamus .d 55 to 944 1 to 890 exact     890/911
(97 %)
19 diff
(98.0 %id)
BI667563 brain, hypothalamus .d 55 to 880 1 to 826 P97H E104N C105V E106K I108L ...     826/826
(100 %)
12 diff
(98.6 %id)
BP197721 adrenal gland .d 58 to 639 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
BG684737 B-cells, primary B-cells from tonsils (cell line) .d 58 to 944 1 to 892 exact     892/917
(97 %)
21 diff
(97.8 %id)
AB049942   .d 59 to 686 1 to 628 exact     628/628
(100 %)
1 diff
(99.9 %id)
BE439855 Trabecular meshwork .d 59 to 820 1 to 747 exact     747/747
(100 %)
18 diff
(97.6 %id)
BP225803   .d 59 to 639 1 to 581 exact     581/581
(100 %)
2 diff
(99.7 %id)
AK312084   .d 60 to 560 1 to 501 exact     501/501
(100 %)
0 diff
(100 %id)
BM834091 stomach .d 60 to 617 1 to 558 exact     558/558
(100 %)
0 diff
(100 %id)
BM830659 stomach .d 60 to 617 1 to 558 exact     558/558
(100 %)
0 diff
(100 %id)
BM831419 stomach .d 60 to 617 1 to 558 K116X     558/558
(100 %)
0 diff
(100 %id)
DA554872   .d 61 to 628 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
BM821506 stomach .d 61 to 651 1 to 592 exact     592/592
(100 %)
3 diff
(99.5 %id)
DA898464 skeletal muscle .d 61 to 612 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DB459929 testis .d 62 to 513 1 to 452       452/452
(100 %)
0 diff
(100 %id)
DB462109 testis .d 62 to 534 1 to 473       473/474
(99 %)
1 diff
(99.8 %id)
DB473873 hippocampus .d 62 to 542 1 to 483       483/483
(100 %)
2 diff
(99.6 %id)
DB489660 hypothalamus .d 62 to 522 1 to 461       461/461
(100 %)
0 diff
(100 %id)
DB492765 hypothalamus .d 62 to 519 1 to 458       458/459
(99 %)
3 diff
(99.4 %id)
DB495279 hypothalamus .d 62 to 553 1 to 492       492/492
(100 %)
4 diff
(99.2 %id)
DB500157 hypothalamus .d 62 to 563 1 to 504 L22*     504/504
(100 %)
10 diff
(98.1 %id)
DB502810 hypothalamus .d 62 to 263 1 to 204       204/204
(100 %)
5 diff
(97.6 %id)
DB505131 hypothalamus .d 62 to 519 1 to 458       458/458
(100 %)
0 diff
(100 %id)
DB505132 hypothalamus .d 62 to 521 1 to 460       460/460
(100 %)
0 diff
(100 %id)
DB495421 hypothalamus .d 64 to 570 1 to 507 P112A     507/507
(100 %)
1 diff
(99.9 %id)
BM464948 lymph, lymphoma, cell line .d 65 to 719 6 to 662 exact     657/1188
(55 %)
24 diff
(98.0 %id)
CN368391 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 66 to 763 1 to 699 exact     699/699
(100 %)
5 diff
(99.3 %id)
BQ672514 epidermoid carcinoma, cell line, salivary gland .d 68 to 992 1 to 935 exact     935/936
(99 %)
19 diff
(98.0 %id)
BF684993 leiomyosarcoma cell line, uterus .d 70 to 855 1 to 794 P16Q E17R T18L A19L A20L ...     794/878
(90 %)
29 diff
(96.7 %id)
BF686572 leiomyosarcoma cell line, uterus .d 70 to 955 1 to 881 I93X I108M     881/1075
(81 %)
60 diff
(94.5 %id)
BQ071658 brain, neuroblastoma, cell line .d 70 to 986 1 to 918 exact     918/923
(99 %)
6 diff
(99.4 %id)
TI_57147732   .d 70 to 856 60 to 846 exact     787/847
(92 %)
10 diff
(98.9 %id)
BC004976 Kidney, renal cell adenocarcinoma .d 71 to 988 1 to 918 exact available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 918/918
(100 %)
1 diff
(99.9 %id)
BC010076 Uterus, leiomyosarcoma .d 71 to 988 1 to 918 exact available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 918/919
(99 %)
2 diff
(99.8 %id)
CR590691 HeLa cells Cot 25-normalized .d 71 to 944 1 to 874 exact     874/874
(100 %)
0 diff
(100 %id)
AL555227 placenta .d 71 to 944 1 to 874 exact fully sequenced,   874/874
(100 %)
3 diff
(99.7 %id)
DN991004 brain, whole brain .d 71 to 770 1 to 700 exact     700/700
(100 %)
4 diff
(99.5 %id)
CV569210 cornea, eye .d 72 to 665 1 to 594 exact     594/594
(100 %)
0 diff
(100 %id)
BC000547 Brain, neuroblastoma .d 73 to 994 1 to 922 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 922/922
(100 %)
0 diff
(100 %id)
BM040734 Kidney, Wilms' tumor, cell line .d 73 to 928 1 to 855 P16Q E17R T18L A19L A20L ... fully sequenced,   855/855
(100 %)
47 diff
(94.6 %id)
BQ708576 Spleen .d 73 to 984 1 to 922 exact     922/951
(96 %)
22 diff
(97.7 %id)
BG025229 lymph, lymphoma, cell line .d 74 to 805 1 to 734 G33E A34S I35N V36S R37E ...     734/968
(75 %)
15 diff
(98.5 %id)
BG339365 leiomyosarcoma cell line, uterus .d 74 to 864 1 to 774 exact     774/892
(86 %)
28 diff
(96.9 %id)
TI_154194100   .d 74 to 971 46 to 929 exact     884/1006
(87 %)
20 diff
(98.1 %id)
BU174789 ductal carcinoma, cell line, Pancreas .d 76 to 798 1 to 727 G33*     727/901
(80 %)
13 diff
(98.6 %id)
BQ690956 ductal carcinoma, cell line, Pancreas .d 76 to 773 1 to 703 G33*     703/783
(89 %)
7 diff
(99.2 %id)
CF128254 Chondrosarcoma Lung Metastasis cell lines, lung .d 76 to 853 1 to 776 exact     776/776
(100 %)
4 diff
(99.5 %id)
BI760749 pooled colon, kidney, stomach .d 77 to 856 1 to 779 exact     779/780
(99 %)
5 diff
(99.4 %id)
BQ672980 epidermoid carcinoma, cell line, salivary gland .d 78 to 988 1 to 916 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 916/916
(100 %)
13 diff
(98.6 %id)
BM705169 eye, RPE and Choroid .d 78 to 438 1 to 361     Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 361/361
(100 %)
1 diff
(99.8 %id)
CB267538 adipose .d 80 to 666 1 to 587 exact     587/587
(100 %)
1 diff
(99.9 %id)
CB268539 adipose .d 82 to 638 1 to 557 exact     557/557
(100 %)
1 diff
(99.9 %id)
TI_57218275   .d 84 to 560 33 to 515 I86T D87R V88L I89*     483/519
(93 %)
19 diff
(96.4 %id)
BQ947008 epidermoid carcinoma, cell line, lung .d 91 to 981 1 to 901 exact     901/948
(95 %)
17 diff
(98.3 %id)
DB472414 hippocampus .d 92 to 582 1 to 491 exact     491/491
(100 %)
0 diff
(100 %id)
BE392153 endometrium, adenocarcinoma cell line, uterus .d 92 to 584 1 to 493 exact     493/493
(100 %)
0 diff
(100 %id)
BE742413 adenocarcinoma cell line, ovary .d 92 to 728 1 to 636 I108X     636/636
(100 %)
2 diff
(99.7 %id)
BE407596 choriocarcinoma, placenta .d 96 to 853 1 to 754 exact     754/826
(91 %)
18 diff
(97.9 %id)
BE901584 choriocarcinoma, placenta .d 96 to 871 1 to 763 exact     763/921
(82 %)
19 diff
(98.0 %id)
BY796297 eye .d 97 to 673 1 to 577 exact     577/577
(100 %)
1 diff
(99.9 %id)
BE910040 epithelioid carcinoma, Pancreas .d 97 to 626 1 to 529 exact     529/529
(100 %)
1 diff
(99.9 %id)
BM455076 lymph, lymphoma, cell line .d 97 to 995 13 to 913 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 901/913
(98 %)
18 diff
(98.1 %id)
CN368392 embryonic stem cells, DMSO-treated H9 cellline .d 100 to 784 1 to 685 exact     685/685
(100 %)
0 diff
(100 %id)
BG339944 leiomyosarcoma cell line, uterus .d 100 to 869 1 to 759 I93M V94S K95N H96T P97L ...     759/784
(96 %)
20 diff
(97.5 %id)
R32117 placenta .d 101 to 469 1 to 370       370/370
(100 %)
5 diff
(98.7 %id)
BM477310 lymph, lymphoma, cell line .d 102 to 990 1 to 886 exact     886/1044
(84 %)
16 diff
(98.5 %id)
BX280448 adenocarcinoma, ovary .d 103 to 580 1 to 478 exact     478/478
(100 %)
0 diff
(100 %id)
CN368396 embryonic stem cells, DMSO-treated H9 cellline .d 103 to 607 1 to 505 exact     505/505
(100 %)
0 diff
(100 %id)
AA127733 uterus .d 103 to 544 1 to 438   fully sequenced,   438/438
(100 %)
3 diff
(99.4 %id)
AA133391 uterus .d 103 to 495 1 to 394   fully sequenced,   394/394
(100 %)
3 diff
(99.3 %id)
CR980035 T-Lymphocytes .d 104 to 987 1 to 885 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 885/885
(100 %)
2 diff
(99.8 %id)
TI_59381411   .d 105 to 919 102 to 912 I108M V109S P110Q V111S P112H ...     811/890
(91 %)
26 diff
(97.1 %id)
CF128900 Chondrosarcoma Lung Metastasis cell lines, lung .d 107 to 779 1 to 673 exact     673/673
(100 %)
1 diff
(99.9 %id)
TI_154189053   .d 107 to 987 51 to 916 exact AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 866/866
(100 %)
25 diff
(97.2 %id)
BQ673266 epidermoid carcinoma, cell line, salivary gland .d 108 to 977 1 to 890 exact     890/940
(94 %)
40 diff
(95.8 %id)
DA737819   .d 123 to 461 2 to 340   fully sequenced, capped   339/339
(100 %)
1 diff
(99.8 %id)
CB270163 adipose .d 124 to 652 1 to 529 exact     529/529
(100 %)
0 diff
(100 %id)
BF034318 adenocarcinoma, ovary .d 125 to 920 1 to 789 exact     789/829
(95 %)
27 diff
(96.8 %id)
BE383056 brain, neuroblastoma .d 143 to 852 1 to 709 exact     709/710
(99 %)
8 diff
(98.9 %id)
BU502372 mixed (pool of 40 RNAs) .d 160 to 920 1 to 766 exact     766/768
(99 %)
15 diff
(98.1 %id)
BC051302 Primary B-Cells from Tonsils .d 164 to 994 1 to 831 exact available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 831/831
(100 %)
0 diff
(100 %id)
CR597333 Neuroblastoma Cot 10-normalized .d 168 to 988 1 to 821 exact     821/821
(100 %)
0 diff
(100 %id)
BF827990 head_normal .d 178 to 552 382 to 8     Submitted on the opposite strand 375/382
(98 %)
3 diff
(99.3 %id)
TI_1948083487   .d 180 to 567 121 to 508 exact     388/1026
(37 %)
11 diff
(99.0 %id)
BG567405 Liver .d 220 to 869 218 to 860       643/867
(74 %)
43 diff
(95.1 %id)
BI828382 brain, medulla .d 221 to 944 9 to 732       724/792
(91 %)
13 diff
(98.4 %id)
TI_57175150   .d 221 to 944 36 to 759   AAA   724/810
(89 %)
12 diff
(98.6 %id)
BG219316   .d 227 to 987 4 to 763   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 760/763
(99 %)
14 diff
(98.2 %id)
AI193110 lung .d 227 to 990 772 to 7       766/803
(95 %)
8 diff
(99.1 %id)
TI_149301033   .d 227 to 988 871 to 110   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 762/950
(80 %)
6 diff
(99.4 %id)
BG185500   .d 228 to 982 1 to 755       755/784
(96 %)
8 diff
(99.0 %id)
BG203573   .d 228 to 977 1 to 748       748/775
(96 %)
18 diff
(97.7 %id)
BG209867   .d 228 to 971 1 to 741       741/741
(100 %)
11 diff
(98.6 %id)
BG212071   .d 228 to 976 1 to 745       745/767
(97 %)
22 diff
(97.2 %id)
TI_154105493   .d 228 to 994 849 to 84   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 766/950
(80 %)
3 diff
(99.7 %id)
BQ069591 brain, neuroblastoma, cell line .d 235 to 988 1 to 763       763/1085
(70 %)
16 diff
(98.6 %id)
CA308098 Alveolar Macrophage, lung .d 250 to 994 763 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 745/745
(100 %)
0 diff
(100 %id)
CD743040 Alveolar Macrophage, lung .d 250 to 988 757 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 739/739
(100 %)
3 diff
(99.6 %id)
AL555226 placenta .d 282 to 897 616 to 1   fully sequenced,   616/616
(100 %)
1 diff
(99.9 %id)
BF362271 nervous_normal .d 312 to 496 184 to 1       184/184
(100 %)
3 diff
(98.4 %id)
CA446660 Chondrosarcoma, Left Pubic Bone .d 314 to 994 698 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 680/680
(100 %)
2 diff
(99.8 %id)
FN073759 breast carcinoma .d 318 to 412 95 to 1     Submitted on the opposite strand 95/95
(100 %)
0 diff
(100 %id)
BE394786 endometrium, adenocarcinoma cell line, uterus .d 318 to 982 1 to 658       658/746
(88 %)
10 diff
(98.7 %id)
BG572756 placenta .d 331 to 901 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
BQ771747 Chondrosarcoma Grade II, Left Pelvis .d 331 to 988 676 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 658/661
(99 %)
5 diff
(99.3 %id)
CA420934 Bone, Enchondroma cell line .d 340 to 943 621 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 603/603
(100 %)
1 diff
(99.9 %id)
BM976913 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 341 to 988 663 to 16   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 648/648
(100 %)
3 diff
(99.6 %id)
CA421941 Bone, Enchondroma cell line .d 341 to 988 662 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 644/644
(100 %)
4 diff
(99.4 %id)
BU629719 cell lines, Chondrosarcoma .d 341 to 988 665 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 647/647
(100 %)
3 diff
(99.6 %id)
BG217817   .d 364 to 985 629 to 5     Submitted on the opposite strand 625/766
(81 %)
0 diff
(100 %id)
TI_154055835   .d 364 to 988 711 to 88   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 624/851
(73 %)
5 diff
(99.5 %id)
CB242996 Human Lung Epithelial cells, lung .d 364 to 992 647 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 629/636
(98 %)
2 diff
(99.7 %id)
BG201010   .d 365 to 978 650 to 39     Submitted on the opposite strand 612/985
(62 %)
0 diff
(100 %id)
BG206744   .d 365 to 980 654 to 41     Submitted on the opposite strand 614/656
(93 %)
0 diff
(100 %id)
BG220344   .d 365 to 977 651 to 41     Submitted on the opposite strand 611/980
(62 %)
0 diff
(100 %id)
BG193880   .d 367 to 977 651 to 44     Submitted on the opposite strand 608/953
(63 %)
0 diff
(100 %id)
TI_149299398   .d 367 to 988 701 to 83   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 619/815
(75 %)
16 diff
(98.1 %id)
BE858118 brain, glioblastoma (pooled) .d 368 to 943 577 to 1       577/577
(100 %)
1 diff
(99.9 %id)
BG207800   .d 370 to 977 650 to 44     Submitted on the opposite strand 607/651
(93 %)
0 diff
(100 %id)
BF916053 uterus_tumor .d 374 to 665 293 to 2     Submitted on the opposite strand 292/293
(99 %)
0 diff
(100 %id)
BG198940   .d 375 to 977 633 to 45     Submitted on the opposite strand 589/917
(64 %)
0 diff
(100 %id)
AA748042 germinal center B cell .d 378 to 943 581 to 16   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 566/566
(100 %)
1 diff
(99.9 %id)
BM041489 Kidney, Wilms' tumor, cell line .d 392 to 868 481 to 1   fully sequenced,   481/481
(100 %)
5 diff
(99.0 %id)
FN130871 breast carcinoma .d 399 to 471 1 to 73       73/73
(100 %)
5 diff
(93.2 %id)
AI300529 2 pooled tumors (clear cell type), Kidney .d 411 to 990 582 to 3       580/582
(99 %)
0 diff
(100 %id)
AA099271 uterus .d 422 to 992 1 to 570   fully sequenced,   570/570
(100 %)
3 diff
(99.5 %id)
FN142655 breast carcinoma .d 425 to 530 1 to 109       109/109
(100 %)
3 diff
(97.3 %id)
CA418734 Chondrosarcoma Grade II, Left Pelvis .d 430 to 988 577 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 559/559
(100 %)
1 diff
(99.9 %id)
DB370439   .d 434 to 994 558 to 1   fully sequenced,   558/558
(100 %)
15 diff
(97.4 %id)
CB108844 Liver .d 439 to 988 1 to 550   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 550/550
(100 %)
1 diff
(99.9 %id)
BE092679 breast .d 455 to 652 204 to 10     Submitted on the opposite strand 195/205
(95 %)
0 diff
(100 %id)
BE092692 breast .d 461 to 657 202 to 6     Submitted on the opposite strand 197/202
(97 %)
0 diff
(100 %id)
BE395461 endometrium, adenocarcinoma cell line, uterus .d 463 to 978 1 to 515       515/516
(99 %)
3 diff
(99.5 %id)
AA115634 uterus .d 465 to 992 545 to 1   fully sequenced,   545/545
(100 %)
19 diff
(96.6 %id)
BF197135 pooled .d 467 to 990 527 to 4       524/527
(99 %)
0 diff
(100 %id)
AW975854   .d 470 to 987 518 to 1     Submitted on the opposite strand 518/519
(99 %)
44 diff
(91.6 %id)
AW380356 head_neck .d 478 to 894 422 to 6       417/435
(95 %)
0 diff
(100 %id)
AW380375 head_neck .d 478 to 883 408 to 1       408/421
(96 %)
7 diff
(98.4 %id)
AW380377 head_neck .d 478 to 830 352 to 1       352/365
(96 %)
7 diff
(98.1 %id)
AW380384 head_neck .d 478 to 884 410 to 4       407/423
(96 %)
0 diff
(100 %id)
BG210924   .d 480 to 992 517 to 5     Submitted on the opposite strand 513/726
(70 %)
0 diff
(100 %id)
BE350408 leukoplakia of the buccal mucosa, mouth .d 480 to 911 452 to 22     Submitted on the opposite strand 431/452
(95 %)
0 diff
(100 %id)
AI808491 pooled .d 481 to 988 524 to 17   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 508/508
(100 %)
2 diff
(99.7 %id)
R32118 placenta .d 482 to 974 504 to 12       493/507
(97 %)
0 diff
(100 %id)
AI336265 lung .d 482 to 990 509 to 1       509/509
(100 %)
1 diff
(99.9 %id)
AI832813 colon .d 482 to 990 510 to 2       509/510
(99 %)
0 diff
(100 %id)
AI160012 uterus .d 485 to 990 506 to 1       506/506
(100 %)
1 diff
(99.9 %id)
AW380370 head_neck .d 487 to 810 351 to 21       331/376
(88 %)
0 diff
(100 %id)
AI359397 brain, glioblastoma (pooled) .d 487 to 943 457 to 1       457/457
(100 %)
1 diff
(99.8 %id)
AW294804   .d 487 to 988 519 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 502/502
(100 %)
4 diff
(99.3 %id)
DB541171 hippocampus .d 488 to 949 1 to 462     Submitted on the opposite strand 462/464
(99 %)
1 diff
(99.8 %id)
AA029612 heart .d 492 to 994 1 to 504   fully sequenced,   504/504
(100 %)
3 diff
(99.5 %id)
BE745425 adenocarcinoma cell line, ovary .d 492 to 992 1 to 499       499/499
(100 %)
4 diff
(99.2 %id)
AI336001 lung .d 501 to 944 448 to 5       444/448
(99 %)
0 diff
(100 %id)
AA722195 pineal gland .d 507 to 990 485 to 2       484/485
(99 %)
0 diff
(100 %id)
BU553076 ovary, teratocarcinoma, cell line .d 508 to 988 1 to 481   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 481/481
(100 %)
1 diff
(99.8 %id)
AI570532 anaplastic oligodendroglioma, brain .d 513 to 988 476 to 1       476/476
(100 %)
4 diff
(99.2 %id)
AA121508 uterus .d 514 to 992 472 to 1   fully sequenced,   472/472
(100 %)
3 diff
(99.4 %id)
AA865682 2 pooled tumors (clear cell type), Kidney .d 514 to 953 442 to 3       440/442
(99 %)
0 diff
(100 %id)
DB566332 hypothalamus .d 519 to 988 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
DB571303 hypothalamus .d 519 to 994 1 to 476     Submitted on the opposite strand 476/476
(100 %)
0 diff
(100 %id)
DB576401 hypothalamus .d 520 to 987 1 to 468     Submitted on the opposite strand 468/468
(100 %)
3 diff
(99.4 %id)
DB571304 hypothalamus .d 521 to 994 1 to 474     Submitted on the opposite strand 474/474
(100 %)
2 diff
(99.6 %id)
AI911906 colon .d 522 to 947 426 to 1       426/426
(100 %)
1 diff
(99.8 %id)
DB576402 hypothalamus .d 523 to 987 1 to 465     Submitted on the opposite strand 465/465
(100 %)
3 diff
(99.4 %id)
AI141465 heart .d 523 to 990 470 to 3       468/470
(99 %)
0 diff
(100 %id)
AI680468 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 523 to 944 427 to 6       422/427
(98 %)
0 diff
(100 %id)
DB574012 hypothalamus .d 524 to 989 1 to 466     Submitted on the opposite strand 466/468
(99 %)
3 diff
(99.4 %id)
AI190286 heart .d 524 to 944 422 to 2       421/422
(99 %)
0 diff
(100 %id)
AI857944 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .d 524 to 990 467 to 1       467/467
(100 %)
1 diff
(99.8 %id)
DB527542 testis .d 525 to 988 1 to 464     Submitted on the opposite strand 464/464
(100 %)
0 diff
(100 %id)
AI342221 uterus .d 525 to 988 464 to 1       464/464
(100 %)
2 diff
(99.6 %id)
DB563822 hypothalamus .d 528 to 988 1 to 460     Submitted on the opposite strand 460/460
(100 %)
4 diff
(99.2 %id)
DB566326 hypothalamus .d 528 to 994 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
BE350073 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .d 528 to 987 477 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 460/460
(100 %)
2 diff
(99.6 %id)
DB566478 hypothalamus .d 529 to 988 1 to 459     Submitted on the opposite strand 459/459
(100 %)
2 diff
(99.6 %id)
AI862033 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 529 to 988 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
DB542652 hippocampus .d 530 to 987 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
AI096365 uterus .d 531 to 990 463 to 4       460/463
(99 %)
0 diff
(100 %id)
BG656477 Pancreas, Purified pancreatic islet .d 542 to 989 448 to 1     Submitted on the opposite strand 448/448
(100 %)
2 diff
(99.6 %id)
BM975659 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 542 to 988 465 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 447/447
(100 %)
1 diff
(99.8 %id)
AI361255 brain, glioblastoma (pooled) .d 543 to 989 447 to 1       447/447
(100 %)
1 diff
(99.8 %id)
AI954960 four pooled poorly-differentiatedadenocarcinomas, lung .d 543 to 988 460 to 15   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 446/446
(100 %)
2 diff
(99.6 %id)
AI371048 lung .d 544 to 988 445 to 1       445/445
(100 %)
0 diff
(100 %id)
DB525374 testis .d 545 to 988 1 to 444     Submitted on the opposite strand 444/444
(100 %)
1 diff
(99.8 %id)
DB556974 hypothalamus .d 546 to 988 1 to 444     Submitted on the opposite strand 444/444
(100 %)
9 diff
(98.0 %id)
DB553627 hypothalamus .d 549 to 987 1 to 439     Submitted on the opposite strand 439/439
(100 %)
3 diff
(99.4 %id)
AI091483 pooled .d 551 to 988 450 to 13   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 438/438
(100 %)
2 diff
(99.6 %id)
AI559677 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 551 to 988 459 to 22   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 438/438
(100 %)
1 diff
(99.8 %id)
BU191142 melanotic melanoma, cell line, skin .d 561 to 994 1 to 434   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 434/434
(100 %)
1 diff
(99.8 %id)
AI346804 adenocarcinoma, colon .d 570 to 988 419 to 1       419/419
(100 %)
1 diff
(99.8 %id)
AI130942 heart .d 571 to 994 426 to 3       424/426
(99 %)
0 diff
(100 %id)
DB562981 hypothalamus .d 574 to 988 1 to 415     Submitted on the opposite strand 415/416
(99 %)
2 diff
(99.6 %id)
DB559222 hypothalamus .d 580 to 989 1 to 410     Submitted on the opposite strand 410/412
(99 %)
3 diff
(99.3 %id)
AA688307 normal prostate, Prostate .d 580 to 988 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AW189276 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 581 to 990 412 to 4       409/412
(99 %)
0 diff
(100 %id)
AI189025 placenta .d 582 to 987 407 to 1       407/407
(100 %)
2 diff
(99.6 %id)
AI767694 Kidney .d 584 to 988 405 to 1       405/405
(100 %)
2 diff
(99.6 %id)
AW614333 Kidney .d 604 to 990 388 to 2       387/388
(99 %)
0 diff
(100 %id)
AI354954 lung .d 609 to 987 379 to 1       379/379
(100 %)
1 diff
(99.8 %id)
H99705 melanocyte .d 623 to 988 378 to 11   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 368/368
(100 %)
3 diff
(99.2 %id)
EC492758 Prostate .d 635 to 740 1 to 106       106/106
(100 %)
0 diff
(100 %id)
AA470877 colon .d 635 to 946 312 to 1       312/312
(100 %)
1 diff
(99.7 %id)
AA564293 normal prostate, Prostate .d 648 to 954 308 to 1       308/308
(100 %)
2 diff
(99.4 %id)
AI301595 carcinoid, lung .d 649 to 989 341 to 1       341/341
(100 %)
3 diff
(99.2 %id)
AI982790 pooled germ cell tumors .d 660 to 988 329 to 1       329/329
(100 %)
1 diff
(99.7 %id)
AW237470 Kidney .d 660 to 987 328 to 1       328/328
(100 %)
0 diff
(100 %id)
BE671766 pooled germ cell tumors .d 660 to 988 329 to 1       329/329
(100 %)
1 diff
(99.7 %id)
BE671907 pooled germ cell tumors .d 660 to 988 329 to 1       329/329
(100 %)
3 diff
(99.1 %id)
BF059385 pooled germ cell tumors .d 660 to 988 329 to 1       329/329
(100 %)
1 diff
(99.7 %id)
AW271629 Kidney .d 665 to 988 340 to 17   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 324/324
(100 %)
1 diff
(99.7 %id)
AA026111 heart .d 666 to 993 328 to 1   fully sequenced,   328/328
(100 %)
1 diff
(99.7 %id)
FN096737 breast carcinoma .d 671 to 730 9 to 68       60/69
(86 %)
1 diff
(98.6 %id)
AA853830 Bone, Hip .d 671 to 964 299 to 6       294/299
(98 %)
0 diff
(100 %id)
BU734441 eye, RPE and Choroid .d 686 to 988 321 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 303/303
(100 %)
2 diff
(99.4 %id)
CN368395 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 688 to 899 1 to 212       212/212
(100 %)
2 diff
(99.1 %id)
AA098892 uterus .d 692 to 994 311 to 1   fully sequenced,   311/311
(100 %)
5 diff
(98.4 %id)
AA468597 colon .d 703 to 990 288 to 1       288/288
(100 %)
0 diff
(100 %id)
BF348966 denis_drash .d 709 to 912 204 to 1       204/204
(100 %)
9 diff
(95.6 %id)
BE175251 head_neck .d 736 to 951 246 to 30     Submitted on the opposite strand 217/260
(83 %)
0 diff
(100 %id)
FN109062 breast carcinoma .d 741 to 843 102 to 1     Submitted on the opposite strand 102/102
(100 %)
2 diff
(98.1 %id)
AI758913 Kidney .d 762 to 988 227 to 1       227/227
(100 %)
0 diff
(100 %id)
DV462638 cochlea, ear .d 766 to 987 254 to 33   AAA Submitted on the opposite strand 222/223
(99 %)
0 diff
(100 %id)
C00620   .d 773 to 988 1 to 216       216/216
(100 %)
0 diff
(100 %id)
BM768223 stomach .d 790 to 988 1 to 199   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 199/199
(100 %)
0 diff
(100 %id)
EB362761 eye, lens .d 821 to 994 208 to 35   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 174/174
(100 %)
0 diff
(100 %id)
BE708601 head_neck .d 841 to 981 141 to 1       141/163
(86 %)
4 diff
(97.6 %id)
EH355778   .d 914 to 990 1 to 76       76/76
(100 %)
4 diff
(94.8 %id)
CN368394 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1 to 649 1 to 650 exact tiling clone,   650/650
(100 %)
6 diff
(99.1 %id)
BF726865 eye, lens .f 1 to 534 1 to 534 exact tiling clone,   534/534
(100 %)
0 diff
(100 %id)
DA854348 placenta .g 1 to 594 2 to 595   tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
BG718840 testis .g 69 to 813 1 to 740   available from MGC,   740/747
(99 %)
27 diff
(96.4 %id)
BC042752 testis .g 74 to 4001 1 to 3926 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 3926/3926
(100 %)
3 diff
(100.0 %id)
DB136330 thymus .g 272 to 663 2 to 392   capped   391/391
(100 %)
1 diff
(99.8 %id)
DB157912 thymus .g 315 to 894 2 to 581   tiling clone, capped   580/580
(100 %)
2 diff
(99.7 %id)
DB229690 trachea .g 570 to 1143 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
AA834090 Kidney, kidney tumor .g 628 to 743 1 to 116       116/116
(100 %)
1 diff
(99.2 %id)
DA549345   .g 1368 to 1939 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA960439 Spleen .g 1496 to 2039 2 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
DA374220 thalamus .g 1501 to 2052 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
CV370749 testis_normal .g 1753 to 1895 148 to 2     Submitted on the opposite strand 147/154
(95 %)
0 diff
(100 %id)
DA747572   .g 1854 to 2415 2 to 563   tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
BG961522 colon .g 2462 to 2604 156 to 13       144/156
(92 %)
0 diff
(100 %id)
AA827788 germinal center B cell .g 2496 to 2790 294 to 1       294/294
(100 %)
3 diff
(99.0 %id)
CD101808 Blood vessels - aorta, basilar and artery .g 2627 to 3317 1 to 694       694/743
(93 %)
4 diff
(99.5 %id)
BI042406 nervous_tumor .g 2802 to 2971 6 to 179       174/183
(95 %)
11 diff
(94.0 %id)
CV423249 nervous_tumor .g 2802 to 2971 6 to 179       174/183
(95 %)
11 diff
(94.0 %id)
BM713560 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 2908 to 3411 1 to 504   fully sequenced, Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 504/504
(100 %)
0 diff
(100 %id)
BM798363 Ascites, stomach .g 3106 to 3559 1 to 454       454/454
(100 %)
3 diff
(99.4 %id)
CB128704 Liver .g 3196 to 3797 1 to 602 exact     602/602
(100 %)
1 diff
(99.9 %id)
BU739587 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 3353 to 4001 667 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 649/649
(100 %)
0 diff
(100 %id)
DB325013   .g 3462 to 4001 541 to 1       541/541
(100 %)
2 diff
(99.7 %id)
DB345026 thymus .g 3465 to 4007 543 to 1       543/543
(100 %)
3 diff
(99.5 %id)
CB106520 Liver .h 1 to 422 2 to 424 exact tiling clone,   424/424
(100 %)
1 diff
(99.8 %id)
BP198334 adrenal gland .h 2 to 583 1 to 582 exact     582/582
(100 %)
1 diff
(99.9 %id)
BU622555 cell lines, Chondrosarcoma .h 92 to 790 717 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 699/699
(100 %)
0 diff
(100 %id)
AF426258   .i 1 to 654 1 to 654 exact tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 654/654
(100 %)
0 diff
(100 %id)
NR_027267.1   .i 1 to 654 1 to 654 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 654/654
(100 %)
0 diff
(100 %id)
AA007432 liver and spleen .i 42 to 314 1 to 275 K61R L63T     275/283
(97 %)
6 diff
(97.9 %id)
BX098800 lung .i 46 to 645 1 to 600 exact     600/600
(100 %)
0 diff
(100 %id)
BC093749 Brain, cerebellum, PCR rescued clones .i 71 to 346 1 to 276 exact     276/276
(100 %)
0 diff
(100 %id)
BC111996 Brain, cerebellum, PCR rescued clones .i 71 to 353 1 to 283 exact     283/283
(100 %)
0 diff
(100 %id)
AI423249 brain, glioblastoma (pooled) .i 207 to 654 448 to 1       448/448
(100 %)
2 diff
(99.6 %id)
BF477347 brain, glioblastoma (pooled) .i 225 to 654 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AI919214 brain, glioblastoma (pooled) .i 230 to 654 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI027483 brain, glioblastoma (pooled) .i 288 to 655 370 to 3       368/370
(99 %)
0 diff
(100 %id)
AW139993   .i 288 to 654 384 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 367/367
(100 %)
0 diff
(100 %id)
N79996 lung .i 353 to 654 306 to 1       306/306
(100 %)
5 diff
(98.4 %id)
AI471119 brain, glioblastoma (pooled) .i 522 to 654 133 to 1       133/133
(100 %)
0 diff
(100 %id)
AK055913   .j-u 1 to 2882 2 to 2885 exact tiling clone, available from FLJ,   2885/2885
(100 %)
27 diff
(99.1 %id)
DA647710   .j-u 1 to 563 2 to 566   capped   565/565
(100 %)
10 diff
(98.3 %id)
BF753979 colon .j-u 519 to 921 1 to 403       403/403
(100 %)
12 diff
(97.1 %id)
DB321595   .j-u 2337 to 2882 549 to 1   tiling clone,   549/549
(100 %)
17 diff
(97.0 %id)
AK096374   .k 1 to 1949 2 to 1951 exact tiling clone, available from FLJ,   1951/1951
(100 %)
2 diff
(99.9 %id)
DA666669   .l 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
CD512568 Pooled-Skin .l 299 to 1026 1 to 735   tiling clone,   735/758
(96 %)
12 diff
(98.5 %id)
W65378 heart .l 971 to 1428 1 to 459   tiling clone, fully sequenced,   459/459
(100 %)
1 diff
(99.8 %id)
W61117 heart .l 1398 to 1773 375 to 1   tiling clone, fully sequenced,   375/375
(100 %)
1 diff
(99.8 %id)
NR_027266.1   .m 1 to 1269 1 to 1269 exact RefSeq, tiling clone,   1269/1269
(100 %)
0 diff
(100 %id)
AK092704 skeletal muscle .m 72 to 1269 1 to 1198 exact available from FLJ,   1198/1198
(100 %)
0 diff
(100 %id)
DA900437 skeletal muscle .m 73 to 641 2 to 571 D33* capped   570/570
(100 %)
1 diff
(99.9 %id)
BM695339 eye, optic nerve .m 104 to 737 1 to 634 exact fully sequenced,   634/634
(100 %)
0 diff
(100 %id)
DA727829   .m 178 to 512 2 to 336   capped   335/338
(99 %)
2 diff
(99.5 %id)
BI002334 head_normal .m 259 to 699 1 to 438       438/438
(100 %)
8 diff
(98.2 %id)
BM664988 eye, optic nerve .m 707 to 1264 587 to 29   fully sequenced,   559/587
(95 %)
1 diff
(99.9 %id)
DB331117 skeletal muscle .m 731 to 1269 539 to 1       539/539
(100 %)
0 diff
(100 %id)
DB450512 testis .n 1 to 434 1 to 434 Q45K tiling clone,   434/434
(100 %)
7 diff
(98.4 %id)
BX282240 brain, medulla .n 26 to 570 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BI829895 brain, medulla .n 26 to 856 1 to 830   tiling clone,   830/830
(100 %)
7 diff
(99.2 %id)
TI_57176479   .n 26 to 856 40 to 869       830/869
(95 %)
13 diff
(98.6 %id)
BU508954 leiomyosarcoma, uterus .o 1 to 797 1 to 807 exact tiling clone,   807/926
(87 %)
22 diff
(97.7 %id)
BE384195 melanotic melanoma, skin .o 21 to 748 1 to 721 exact tiling clone,   721/723
(99 %)
14 diff
(98.1 %id)
BE384048 melanotic melanoma, skin .o 21 to 540 1 to 520 exact     520/520
(100 %)
0 diff
(100 %id)
BG199472   .p 1 to 784 5 to 788 H25L tiling clone,   788/789
(99 %)
23 diff
(97.1 %id)
BI087343 cervix .q 1 to 766 1 to 779 exact tiling clone,   777/779
(99 %)
18 diff
(97.7 %id)
BG462147   .q 420 to 668 50 to 297   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 248/297
(83 %)
6 diff
(98.0 %id)
DA406094 thalamus .r 1 to 603 2 to 604 exact tiling clone, capped   603/603
(100 %)
1 diff
(99.9 %id)
ES308294 beard hair, skin .r 69 to 202 1 to 131       131/133
(98 %)
4 diff
(97.0 %id)
DB080492 testis .s 1 to 574 2 to 573 T50A tiling clone, capped   572/572
(100 %)
3 diff
(99.5 %id)
Z36963   .t 1 to 391 6 to 396 exact tiling clone,   396/396
(100 %)
0 diff
(100 %id)
DB484631 hypothalamus Gene MRPS6andSLC5A3andC21orf82, variant not shown         This clone was ignored    
AV727688 hypothalamus Gene MRPS6andSLC5A3andC21orf82, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BF826686 head_normal Gene MRPS6andSLC5A3andC21orf82, variant not shown         Suspected internal deletion, this clone was ignored    
DA706316   Gene MRPS6andSLC5A3andC21orf82, variant not shown       capped      
DB323996   Gene MRPS6andSLC5A3andC21orf82, variant not shown              
DA706330   Gene MRPS6andSLC5A3andC21orf82, variant not shown       capped      
CA337294 posterior rhombomeres 5-8 (4 pooled) Gene MRPS6andSLC5A3andC21orf82, variant not shown         Submitted on the opposite strand    
TI_57166317   Gene MRPS6andSLC5A3andC21orf82, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI