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Gene SLC5A2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
70 supporting clones for gene SLC5A2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
M95549 Kidney .a 1 to 2272 1 to 2272 exact tiling clone,   2272/2273
(99 %)
2 diff
(100.0 %id)
NM_003041.3   .a 2 to 2280 1 to 2279 exact RefSeq,   2279/2279
(100 %)
6 diff
(99.8 %id)
AI628969 Kidney .a 85 to 428 344 to 1       344/344
(100 %)
0 diff
(100 %id)
AW194973 Kidney .a 99 to 379 282 to 1       282/282
(100 %)
2 diff
(99.3 %id)
DA633132 Kidney .a 146 to 734 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA633169 Kidney .a 146 to 679 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
AI244989 Kidney .a 465 to 997 1 to 530     Submitted on the opposite strand 530/553
(95 %)
7 diff
(98.8 %id)
AI915879 Kidney .a 465 to 905 1 to 443     Submitted on the opposite strand 443/443
(100 %)
4 diff
(99.1 %id)
AW271314 Kidney .a 465 to 690 1 to 226     Submitted on the opposite strand 226/226
(100 %)
0 diff
(100 %id)
BM069853 Islets of Langerhans, Pancreas .a 565 to 1148 1 to 584       584/584
(100 %)
0 diff
(100 %id)
TI_45236587   .a 678 to 1083 626 to 219     Submitted on the opposite strand 408/816
(50 %)
4 diff
(99.6 %id)
BI763504 pooled colon, kidney, stomach .a 1428 to 2272 1 to 844       844/939
(89 %)
10 diff
(99.0 %id)
TI_57152150   .a 1428 to 2272 73 to 916   AAA   844/971
(86 %)
16 diff
(98.4 %id)
BX280245 pooled colon, kidney, stomach .a 1435 to 1948 1 to 514       514/514
(100 %)
0 diff
(100 %id)
AI207344 Kidney .a 1468 to 2273 809 to 1       809/938
(86 %)
54 diff
(94.3 %id)
BM069605 Islets of Langerhans, Pancreas .a 1686 to 2271 592 to 7       586/592
(98 %)
1 diff
(99.9 %id)
BM923748 pooled colon, kidney, stomach .a 1703 to 2273 1 to 572       572/1363
(41 %)
6 diff
(99.6 %id)
AI222550 Kidney .a 1758 to 2274 523 to 7   tiling clone,   517/523
(98 %)
1 diff
(99.9 %id)
DB519223 testis .a 1798 to 2271 1 to 474     Submitted on the opposite strand 474/476
(99 %)
1 diff
(99.8 %id)
BQ368252 placenta_normal .a 1877 to 2020 1 to 142       142/142
(100 %)
7 diff
(95.1 %id)
BX119242 Kidney .a 1936 to 2123 1 to 188       188/188
(100 %)
5 diff
(97.4 %id)
BC131542 PCR rescued clones .b 1 to 1852 1 to 1852 exact tiling clone,   1852/1852
(100 %)
0 diff
(100 %id)
AA864871 Kidney .b 1529 to 1952 431 to 7       425/456
(93 %)
0 diff
(100 %id)
BF594800 Kidney .b 1530 to 1951 425 to 4       422/425
(99 %)
0 diff
(100 %id)
BF431568 Kidney .b 1553 to 1952 403 to 4   tiling clone,   400/408
(98 %)
0 diff
(100 %id)
BE833185 ovary .b 1695 to 2019 10 to 341       332/341
(97 %)
21 diff
(93.9 %id)
AI636228 Kidney .b 1716 to 1941 238 to 11       228/238
(95 %)
0 diff
(100 %id)
BF594836 Kidney .b 1724 to 1951 233 to 6       228/233
(97 %)
0 diff
(100 %id)
AW612545 Kidney .b 1758 to 1951 194 to 1       194/194
(100 %)
0 diff
(100 %id)
BF955899 nervous_normal .b 1791 to 2084 1 to 294   tiling clone,   294/294
(100 %)
12 diff
(96.0 %id)
BF955900 nervous_normal .b 1821 to 2066 1 to 248       248/248
(100 %)
11 diff
(95.6 %id)
BG399890 Kidney .c 1 to 655 1 to 678 P15A C16L S17L L18T P20S ... tiling clone,   678/839
(80 %)
28 diff
(96.7 %id)
DA159571 amygdala .d 1 to 553 5 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AK054830 cerebellum .d 1 to 2466 2 to 2467 exact tiling clone, available from FLJ,   2467/2467
(100 %)
0 diff
(100 %id)
DA056376 cerebellum .d 1 to 547 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
BI007415 kidney_tumor .d 844 to 1319 13 to 488       476/488
(97 %)
6 diff
(98.8 %id)
BF115079 Kidney .d 1008 to 1301 298 to 5       294/298
(98 %)
0 diff
(100 %id)
DB577554 hypothalamus .d 1186 to 1665 480 to 1       480/489
(98 %)
0 diff
(100 %id)
DB547901 hippocampus .d 1190 to 1621 432 to 1       432/433
(99 %)
0 diff
(100 %id)
BP393017 pancreatic islet .d 1191 to 1548 358 to 1       358/358
(100 %)
0 diff
(100 %id)
BQ940413 epidermoid carcinoma, cell line, lung .d 1193 to 1939 1 to 750       750/970
(77 %)
15 diff
(98.5 %id)
AW067953 Bone, Hip .d 1218 to 1624 1 to 409       409/409
(100 %)
8 diff
(98.1 %id)
BF155241 breast .d 1395 to 1656 21 to 291       271/291
(93 %)
6 diff
(98.0 %id)
BF945929 nervous_normal .d 1395 to 1656 6 to 266       261/266
(98 %)
6 diff
(97.8 %id)
BF155226 breast .d 1400 to 1656 33 to 290       258/290
(88 %)
6 diff
(98.0 %id)
BF155240 breast .d 1400 to 1656 33 to 289       257/289
(88 %)
6 diff
(98.0 %id)
BF943992 nervous_normal .d 1400 to 1643 12 to 255       244/266
(91 %)
4 diff
(98.5 %id)
BF945905 nervous_normal .d 1400 to 1656 15 to 270       256/270
(94 %)
17 diff
(93.8 %id)
AW375741 colon .d 1410 to 1601 14 to 205       192/207
(92 %)
5 diff
(97.6 %id)
BF945906 nervous_normal .d 1429 to 1656 16 to 241       226/241
(93 %)
17 diff
(93.0 %id)
AI940516 colon .d 1454 to 1787 1 to 334       334/334
(100 %)
4 diff
(98.9 %id)
AW238218 carcinoma in situ from retromolar trigone .d 1514 to 1878 386 to 22       365/386
(94 %)
0 diff
(100 %id)
BQ367845 placenta_normal .d 1705 to 2050 1 to 347       347/405
(85 %)
9 diff
(97.8 %id)
BQ367848 placenta_normal .d 1705 to 2050 1 to 347       347/405
(85 %)
9 diff
(97.8 %id)
CU445669 epidermis .d 1718 to 2428 1 to 711       711/711
(100 %)
7 diff
(99.1 %id)
BQ327830 kidney_tumor .d 1808 to 2236 30 to 459       430/473
(90 %)
13 diff
(97.3 %id)
BG996813 head_neck .d 1824 to 2096 1 to 275       275/275
(100 %)
9 diff
(96.8 %id)
BG015124 placenta_normal .d 1866 to 2329 1 to 469       469/469
(100 %)
19 diff
(96.0 %id)
DB296614 cerebellum .d 1919 to 2466 548 to 1       548/548
(100 %)
0 diff
(100 %id)
BF508561   .e 1 to 347 352 to -4       352/362
(97 %)
1 diff
(99.8 %id)
DA621624 Kidney .e 1 to 531 2 to 532 exact tiling clone, capped   531/531
(100 %)
0 diff
(100 %id)
DB636379 testis .f 1 to 661 1 to 661 exact tiling clone,   661/661
(100 %)
2 diff
(99.7 %id)
TI_57150953   .g 1 to 958 32 to 995 exact tiling clone,   964/1024
(94 %)
40 diff
(96.1 %id)
BI761897 pooled colon, kidney, stomach .g 4 to 958 1 to 961       961/990
(97 %)
34 diff
(96.6 %id)
BX090234 B-cell, chronic lymphotic leukemia .g 433 to 905 1 to 473       473/473
(100 %)
2 diff
(99.6 %id)
AI380509 B-cell, chronic lymphotic leukemia .g 691 to 1215 525 to 1   tiling clone,   525/525
(100 %)
0 diff
(100 %id)
AI651297 Kidney .g 701 to 1173 473 to 1       473/473
(100 %)
0 diff
(100 %id)
BF224456 Kidney .g 864 to 1165 302 to 1       302/302
(100 %)
0 diff
(100 %id)
DA170859 amygdala .h 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
CA433471 mixed .i 1 to 329 15 to 343 exact tiling clone, Submitted on the opposite strand 329/329
(100 %)
0 diff
(100 %id)
AW879741 ovary Gene SLC5A2, variant not shown         Suspected internal deletion, this clone was ignored    
AI245728 Kidney Gene SLC5A2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC