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Gene SLC4A9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
63 supporting clones for gene SLC4A9 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF313465 Kidney .a 1 to 3258 1 to 3258 exact tiling clone,   3258/3258
(100 %)
0 diff
(100 %id)
TI_1971555921   .a 1664 to 3097 1271 to 57     Submitted on the opposite strand 1093/1287
(84 %)
17 diff
(98.7 %id)
TI_2194578293   .a 2036 to 3104 1130 to 62       1069/1290
(82 %)
13 diff
(99.0 %id)
TI_2194578295   .a 2098 to 3104 1059 to 62       998/1138
(87 %)
19 diff
(98.4 %id)
TI_2194578674   .a 2111 to 3109 1 to 1000       1000/1236
(80 %)
9 diff
(99.3 %id)
TI_1971559191   .a 2119 to 3109 9 to 1000   AAA   992/1223
(81 %)
13 diff
(99.0 %id)
TI_1971559223   .a 2219 to 3108 1 to 889       889/1116
(79 %)
13 diff
(98.9 %id)
TI_2194578675   .a 2497 to 3104 1 to 609       609/1269
(47 %)
12 diff
(99.1 %id)
TI_2194578549   .a 2519 to 3104 22 to 608       587/1203
(48 %)
12 diff
(99.1 %id)
AI183992   .a 2552 to 3258 721 to 14   AAA   708/708
(100 %)
20 diff
(97.2 %id)
AW779828 Kidney .a 2764 to 3389 626 to 1       626/640
(97 %)
5 diff
(99.3 %id)
TI_154076748   .a 2875 to 3258 491 to 108   AAA   384/494
(77 %)
2 diff
(99.6 %id)
AI928209 Kidney .a 2906 to 3392 487 to 1   tiling clone,   487/487
(100 %)
0 diff
(100 %id)
AI498467 Kidney .a 2969 to 3388 420 to 1       420/420
(100 %)
4 diff
(99.1 %id)
BE048480 Kidney .a 3007 to 3258 264 to 13   AAA   252/252
(100 %)
1 diff
(99.7 %id)
AF332961   .b 1 to 2995 1 to 2995 R77T tiling clone,   2995/2995
(100 %)
1 diff
(100.0 %id)
NM_031467.2   .c 1 to 3271 1 to 3271 exact RefSeq, AAA   3271/3271
(100 %)
0 diff
(100 %id)
TI_1971555223   .c 10 to 384 65 to 439     Submitted on the opposite strand 375/441
(85 %)
12 diff
(97.3 %id)
TI_2194576187   .c 10 to 1101 47 to 1130   tiling clone,   1084/1248
(86 %)
22 diff
(98.3 %id)
TI_2194578289   .c 10 to 1098 46 to 1132       1087/1180
(92 %)
44 diff
(96.3 %id)
TI_2194578291   .c 10 to 1106 47 to 1133       1087/1232
(88 %)
22 diff
(98.3 %id)
AB032762 testis .c 42 to 3144 1 to 3103   tiling clone,   3103/3107
(99 %)
1 diff
(100.0 %id)
TI_2194578786   .c 552 to 1695 13 to 1174       1162/1299
(89 %)
57 diff
(95.7 %id)
TI_2194578670   .c 555 to 1572 15 to 1036       1022/1247
(81 %)
20 diff
(98.4 %id)
TI_2194580002   .c 571 to 1047 1 to 477       477/477
(100 %)
11 diff
(97.7 %id)
TI_1971556181   .c 595 to 1687 14 to 1103       1090/1275
(85 %)
11 diff
(99.2 %id)
TI_2194575253   .c 792 to 1234 453 to 9       445/482
(92 %)
8 diff
(98.4 %id)
TI_2194575242   .c 801 to 1228 444 to 16       429/444
(96 %)
2 diff
(99.6 %id)
TI_1971559199   .c 889 to 1716 22 to 847       826/847
(97 %)
8 diff
(99.1 %id)
TI_2194580003   .c 1091 to 1524 436 to 3       434/436
(99 %)
4 diff
(99.1 %id)
TI_2194575244   .c 1203 to 1670 479 to 10       470/479
(98 %)
1 diff
(99.8 %id)
TI_2194575255   .c 1216 to 1668 467 to 15       453/520
(87 %)
8 diff
(98.5 %id)
TI_2194580004   .c 1275 to 1742 479 to 3       486/479
(101 %)
61 diff
(87.3 %id)
AI434423 Kidney .c 1890 to 3272 553 to 13   tiling clone, AAA   493/542
(90 %)
18 diff
(96.7 %id)
TI_2194578548   .c 2055 to 2969 1 to 910       910/1111
(81 %)
18 diff
(98.4 %id)
TI_2194579999   .c 2135 to 2652 517 to 1       517/519
(99 %)
8 diff
(98.5 %id)
BX090920   .c 2293 to 2799 1 to 506       506/506
(100 %)
2 diff
(99.7 %id)
AW195628 Kidney .c 2445 to 3144 702 to 5       698/702
(99 %)
6 diff
(99.2 %id)
AI927652 Kidney .c 2461 to 3144 688 to 5       684/689
(99 %)
5 diff
(99.3 %id)
AA917682 Kidney .c 3032 to 3272 241 to 1       241/241
(100 %)
0 diff
(100 %id)
AF336237 kidney; testis .d 1 to 3085 1 to 3085 V418M R757K tiling clone, AAA   3085/3085
(100 %)
3 diff
(100.0 %id)
BC136262 Testicle, PCR rescued clones .e 1 to 2837 1 to 2837 G23W tiling clone,   2837/2837
(100 %)
3 diff
(99.9 %id)
BC143602 Lung and placenta, PCR rescued clones .e 1 to 2839 1 to 2839 G23W tiling clone,   2839/2839
(100 %)
3 diff
(99.9 %id)
TI_2194578671   .e 860 to 1945 1 to 1099       1099/1100
(99 %)
26 diff
(97.7 %id)
TI_2194578787   .e 862 to 1904 1 to 1042       1042/1047
(99 %)
28 diff
(97.4 %id)
TI_2194578672   .e 1321 to 2185 20 to 887       868/890
(97 %)
15 diff
(98.4 %id)
TI_2194575245   .e 1592 to 2103 517 to 7       511/517
(98 %)
1 diff
(99.9 %id)
TI_2194575256   .e 1630 to 2102 480 to 9       472/481
(98 %)
5 diff
(99.0 %id)
TI_2194580000   .e 1636 to 2063 444 to 16   tiling clone,   429/444
(96 %)
3 diff
(99.4 %id)
TI_1971555923   .e 1678 to 2840 1200 to 57     Submitted on the opposite strand 1122/1285
(87 %)
16 diff
(98.8 %id)
TI_1971559201   .e 1704 to 2670 1 to 972       972/1046
(92 %)
33 diff
(96.9 %id)
TI_1971559207   .e 1704 to 2661 1 to 969       967/975
(99 %)
39 diff
(96.0 %id)
TI_2194578673   .e 1704 to 2840 1 to 1144   tiling clone,   1144/1291
(88 %)
20 diff
(98.5 %id)
TI_2194576568   .e 1708 to 2847 1189 to 60       1130/1284
(88 %)
17 diff
(98.7 %id)
TI_1971559167   .e 1710 to 2840 1177 to 57     Submitted on the opposite strand 1123/1230
(91 %)
18 diff
(98.6 %id)
DA102495 cerebellum .f 1 to 588 2 to 589 A37G tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
CB046221 2 pooled tumors (clear cell type), Kidney .g 1 to 549 9 to 557 exact tiling clone, fully sequenced,   557/557
(100 %)
5 diff
(99.2 %id)
CB046220 2 pooled tumors (clear cell type), Kidney .g 488 to 886 425 to 27   tiling clone, fully sequenced, AAA   399/399
(100 %)
0 diff
(100 %id)
AW058525 Kidney .g 514 to 756 245 to 3       243/249
(97 %)
0 diff
(100 %id)
BF826315 head_normal .h-u 1 to 353 22 to 373   tiling clone,   352/373
(94 %)
6 diff
(98.4 %id)
CK002375 brain/CNS, Bulk tissue from Human Spinal cord .h-u 259 to 869 1 to 611   tiling clone,   611/611
(100 %)
4 diff
(99.4 %id)
BF197548 Kidney .i 1 to 528 533 to 6 exact tiling clone,   528/533
(99 %)
3 diff
(99.5 %id)
AI762331 Kidney .j-u 1 to 455 457 to 3 exact tiling clone,   455/457
(99 %)
0 diff
(100 %id)
TI_1971559169   Gene SLC4A9, variant not shown         Submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C