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Gene SLC48A1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
364 supporting clones for gene SLC48A1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA335273 epididymis .b 1230 to 1589 1 to 361       361/361
(100 %)
4 diff
(98.9 %id)
AA335303 epididymis .b 1437 to 1687 1 to 250       250/251
(99 %)
3 diff
(98.9 %id)
AA335317 epididymis .b 1437 to 1806 1 to 372       372/372
(100 %)
10 diff
(97.4 %id)
AA336012 epididymis .b 1437 to 1758 1 to 323       323/323
(100 %)
5 diff
(98.5 %id)
AA365021 pineal body .b 1362 to 1628 1 to 270       270/278
(97 %)
9 diff
(96.8 %id)
AA585107   .b 1831 to 1963 1 to 133       133/133
(100 %)
0 diff
(100 %id)
BP196555 adrenal gland .b 108 to 688 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA010653 adrenal gland .e 1 to 576 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA017612 adrenal gland .d 1 to 576 2 to 577   tiling clone, capped   576/576
(100 %)
1 diff
(99.9 %id)
BP382576 adipose tissue .b 960 to 1575 1 to 616       616/618
(99 %)
4 diff
(99.4 %id)
AK000496   .b 37 to 1962 1 to 1926 R110G available from FLJ, AAA   1926/1926
(100 %)
4 diff
(99.8 %id)
AK025856   .b 1396 to 3045 1 to 1650   available from FLJ, AAA   1650/1650
(100 %)
6 diff
(99.7 %id)
AW800654 uterus .b 1697 to 1851 2 to 154       153/164
(93 %)
7 diff
(95.8 %id)
AW958160   .b 1229 to 1926 1 to 698       698/698
(100 %)
7 diff
(99.0 %id)
AW965514   .b 1229 to 1764 1 to 536       536/536
(100 %)
14 diff
(97.4 %id)
AW965533   .b 1229 to 1703 1 to 475       475/475
(100 %)
6 diff
(98.8 %id)
CB156399 brain .b 1534 to 2028 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
BC026344 Brain, hypothalamus .b 67 to 3043 1 to 2977   tiling clone, available from MGC, AAA   2977/2977
(100 %)
4 diff
(99.9 %id)
BC065033 Skin, melanotic melanoma. .b 65 to 1962 1 to 1899   available from MGC, AAA   1899/1899
(100 %)
2 diff
(99.9 %id)
BE170238 head_neck .b 503 to 786 1 to 284       284/284
(100 %)
4 diff
(98.6 %id)
BF738567 bladder_tumor .d 394 to 927 20 to 549 S6N Y12T R13D S14L V15S ... tiling clone,   530/553
(95 %)
28 diff
(95.0 %id)
BF820387 kidney_tumor .b 1318 to 1637 324 to 2     Submitted on the opposite strand 323/324
(99 %)
0 diff
(100 %id)
BF924457 nervous_tumor .b 1255 to 1586 1 to 332       332/332
(100 %)
2 diff
(99.4 %id)
BF929460 nervous_tumor .b 1334 to 1834 1 to 501       501/501
(100 %)
7 diff
(98.7 %id)
BF956635 nervous_normal .b 1480 to 1937 20 to 474       455/497
(91 %)
6 diff
(98.8 %id)
BF957926 nervous_normal .b 1327 to 1471 148 to 4       145/148
(97 %)
0 diff
(100 %id)
BI003503 head_normal .b 1646 to 1962 1 to 314   AAA   314/314
(100 %)
8 diff
(97.5 %id)
BI009768 kidney_tumor .b 1238 to 1473 25 to 259       235/259
(90 %)
6 diff
(97.7 %id)
BI051215 placenta_normal .b 975 to 1429 455 to 1       455/455
(100 %)
10 diff
(97.9 %id)
BQ361554 ovary .e 539 to 711 1 to 175       175/176
(99 %)
10 diff
(94.4 %id)
DA062011 cerebellum .b 69 to 619 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA069366 cerebellum .b 34 to 499 2 to 467   capped   466/466
(100 %)
1 diff
(99.8 %id)
DA071033 cerebellum .b 71 to 613 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA076744 cerebellum .b 90 to 657 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA077700 cerebellum .b 70 to 623 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA098718 cerebellum .b 1916 to 2405 2 to 491   capped   490/490
(100 %)
3 diff
(99.4 %id)
DA111377 cerebellum .b 37 to 594 2 to 559 exact capped   558/558
(100 %)
0 diff
(100 %id)
DA127692 cerebellum .b 753 to 1346 2 to 593   capped   592/592
(100 %)
5 diff
(99.2 %id)
DA159204 amygdala .b 87 to 645 2 to 563   capped   562/562
(100 %)
4 diff
(99.3 %id)
DA163301 amygdala .b 1044 to 1495 2 to 453   capped   452/452
(100 %)
2 diff
(99.6 %id)
DA179016 amygdala .b 318 to 836 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
DA184654 amygdala .k 1 to 458 2 to 459 exact tiling clone, capped   458/458
(100 %)
0 diff
(100 %id)
DA198826 brain .b 38 to 606 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA198954 brain .b 49 to 615 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA204583 brain .b 69 to 647 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA216212 brain .b 1808 to 2141 2 to 335   capped   334/334
(100 %)
3 diff
(99.2 %id)
DA235023 brain .b 89 to 612 2 to 525   capped   524/524
(100 %)
1 diff
(99.9 %id)
DA252588 caudate nucleus .b 74 to 558 2 to 486   capped   485/485
(100 %)
1 diff
(99.8 %id)
DA254295 caudate nucleus .b 69 to 528 2 to 461   capped   460/460
(100 %)
1 diff
(99.8 %id)
DA254590 caudate nucleus .b 74 to 612 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA255215 caudate nucleus .b 71 to 626 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA256200 caudate nucleus .b 1039 to 1602 2 to 565   capped   564/566
(99 %)
2 diff
(99.7 %id)
DA258016 caudate nucleus .b 71 to 649 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA261665 caudate nucleus .b 68 to 578 2 to 512   capped   511/511
(100 %)
1 diff
(99.9 %id)
DA262256 caudate nucleus .b 71 to 612 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA265475 caudate nucleus .b 89 to 612 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA266183 caudate nucleus .i 23 to 567 2 to 547 exact capped   546/546
(100 %)
1 diff
(99.9 %id)
DA267027 caudate nucleus .b 71 to 621 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA269789 caudate nucleus .b 71 to 624 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA271617 caudate nucleus .b 38 to 610 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA277160 corpus callosum .b 425 to 1003 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
DA277490 corpus callosum .b 71 to 612 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
DA281138 corpus callosum .b 69 to 646 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA284914 corpus callosum .b 70 to 610 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA288657 corpus callosum .b 61 to 467 2 to 409   capped   408/408
(100 %)
1 diff
(99.8 %id)
DA291486 hippocampus .b 70 to 578 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DA293398 hippocampus .b 87 to 657 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA293939 hippocampus .b 71 to 612 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA296586 hippocampus .b 68 to 621 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA316733 hippocampus .j-u 1 to 546 2 to 548 exact tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
DA328960 hippocampus .b 65 to 613 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA333984 hippocampus .b 1736 to 2307 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DA337422 hippocampus .b 1339 to 1922 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA350894 substantia nigra .b 71 to 609 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DA351329 substantia nigra .b 69 to 653 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA357460 subthalamic nucleus .b 71 to 628 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA365742 subthalamic nucleus .b 504 to 946 2 to 444   capped   443/443
(100 %)
2 diff
(99.6 %id)
DA386704 thalamus .b 70 to 655 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA388629 thalamus .b 70 to 644 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BX112572 brain .b 1206 to 1385 1 to 180       180/180
(100 %)
3 diff
(98.4 %id)
BP213275 cerebrum .b 88 to 648 1 to 561       561/561
(100 %)
0 diff
(100 %id)
AV733041 pheochromocytoma .b 1578 to 1959 1 to 382   AAA   382/382
(100 %)
1 diff
(99.8 %id)
CN427417 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 564 to 776 15 to 227       213/227
(93 %)
6 diff
(97.4 %id)
CN427418 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 63 to 484 1 to 422       422/422
(100 %)
2 diff
(99.6 %id)
CN427419 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 957 to 1377 1 to 421       421/421
(100 %)
2 diff
(99.6 %id)
CR618506 B cells (Ramos cell line) Cot 25-normalized .b 76 to 1923 1 to 1848   tiling clone,   1848/1848
(100 %)
0 diff
(100 %id)
CR747841 astrocytoma grade IV, cell line, brain .b 852 to 1330 40 to 521       482/521
(92 %)
6 diff
(98.9 %id)
BX416293 neuroblastoma .b 76 to 940 1 to 866       866/866
(100 %)
8 diff
(99.1 %id)
AL520299 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 62 to 1055 1 to 991       991/1126
(88 %)
11 diff
(99.1 %id)
AL561869 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 920 to 1942 1014 to 1       1014/1077
(94 %)
23 diff
(97.9 %id)
BX366087 Neuroblastoma Cot 10-normalized .b 62 to 898 1 to 830       830/830
(100 %)
6 diff
(99.3 %id)
BX387142 Neuroblastoma Cot 10-normalized .b 889 to 1931 1036 to 1       1036/1076
(96 %)
33 diff
(97.0 %id)
BX387143 Neuroblastoma Cot 10-normalized .b 62 to 928 1 to 864       864/1038
(83 %)
17 diff
(98.4 %id)
BX439331 placenta .b 86 to 1075 1 to 1001       952/1001
(95 %)
34 diff
(96.7 %id)
BX454453 placenta .b 1249 to 1959 713 to 1       713/756
(94 %)
30 diff
(96.1 %id)
BX366965   .b 1132 to 1898 767 to 1       767/767
(100 %)
4 diff
(99.5 %id)
BX387906   .b 51 to 805 1 to 756   tiling clone,   756/756
(100 %)
2 diff
(99.8 %id)
AL582814 B cells from Burkitt lymphoma .b 836 to 1902 1070 to 17       1054/1070
(98 %)
0 diff
(100 %id)
BX370686   .b 739 to 1645 1 to 908       908/974
(93 %)
26 diff
(97.4 %id)
CA391150 eye, RPE/choroid .b 925 to 1292 1 to 368       368/368
(100 %)
1 diff
(99.8 %id)
CV028460 mixed .b 519 to 890 1 to 372       372/493
(75 %)
7 diff
(98.6 %id)
CV029931 mixed .e 489 to 762 1 to 273   tiling clone,   273/452
(60 %)
3 diff
(99.4 %id)
CV398602 colon_ins .b 2114 to 2425 20 to 334       315/334
(94 %)
6 diff
(98.3 %id)
BX471022   .b 1052 to 1334 1 to 279       279/279
(100 %)
9 diff
(96.8 %id)
BX950920   .g 1 to 619 1 to 619 S51G tiling clone,   619/619
(100 %)
3 diff
(99.6 %id)
DT216678 brain .b 2122 to 2777 1 to 656   tiling clone,   656/656
(100 %)
0 diff
(100 %id)
EL735129 mixed .b 134 to 578 1 to 444       444/603
(73 %)
3 diff
(99.6 %id)
DA498570 brain .b 38 to 584 2 to 548 D61G capped   547/547
(100 %)
1 diff
(99.9 %id)
BP232406 muscle .b 308 to 881 1 to 573       573/582
(98 %)
10 diff
(98.3 %id)
DB528633 hippocampus .b 1272 to 1965 1 to 694     Submitted on the opposite strand 694/694
(100 %)
6 diff
(99.2 %id)
DB727796 hippocampus .b 70 to 767 1 to 693       693/693
(100 %)
6 diff
(99.2 %id)
DB530381 hippocampus .b 1309 to 1962 1 to 654     Submitted on the opposite strand 654/654
(100 %)
2 diff
(99.7 %id)
DB727812 hippocampus .b 63 to 463 1 to 401       401/401
(100 %)
0 diff
(100 %id)
DB727834.
matches multiple genes
hippocampus .b 70 to 723 1 to 655     also hits gene HDAC7 655/655
(100 %)
1 diff
(99.9 %id)
DB471472 hippocampus .b 73 to 562 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
DB540202 hippocampus .b 1455 to 1962 1 to 508     Submitted on the opposite strand 508/508
(100 %)
2 diff
(99.7 %id)
DB475350 hippocampus .b 14 to 491 1 to 478       478/478
(100 %)
2 diff
(99.6 %id)
DB544173 hippocampus .b 1249 to 1965 1 to 712     Submitted on the opposite strand 712/712
(100 %)
11 diff
(98.5 %id)
DB480347 hippocampus .d 89 to 578 1 to 490   tiling clone,   490/490
(100 %)
3 diff
(99.4 %id)
DB549101 hippocampus .b 1522 to 1965 1 to 444     Submitted on the opposite strand 444/444
(100 %)
2 diff
(99.6 %id)
DB559506 hypothalamus .b 1238 to 1962 1 to 725     Submitted on the opposite strand 725/725
(100 %)
2 diff
(99.8 %id)
DB727985 hypothalamus .b 73 to 803 1 to 731       731/731
(100 %)
1 diff
(99.9 %id)
DB489863.
matches multiple genes
hypothalamus .a-u 1 to 740 1 to 740 G127S P147Q A162X G163W R164S ... tiling clone, also hits gene slyjeyby 740/740
(100 %)
9 diff
(98.8 %id)
DB496670.
matches multiple genes
hypothalamus .b 70 to 564 1 to 495     also hits gene HDAC7 495/495
(100 %)
0 diff
(100 %id)
DB568515 hypothalamus .b 1493 to 1962 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
DB728030 hypothalamus .b 73 to 760 1 to 690       690/691
(99 %)
13 diff
(98.2 %id)
DB497836.
matches multiple genes
hypothalamus .b 70 to 555 1 to 486     also hits gene HDAC7 486/488
(99 %)
4 diff
(99.2 %id)
DB498088 hypothalamus .b 73 to 571 1 to 499       499/499
(100 %)
0 diff
(100 %id)
DB569181 hypothalamus .b 1487 to 1960 1 to 473     Submitted on the opposite strand 473/475
(99 %)
3 diff
(99.4 %id)
DB499156 hypothalamus .b 73 to 548 1 to 476       476/476
(100 %)
2 diff
(99.6 %id)
DB570264 hypothalamus .b 1244 to 1962 1 to 714     Submitted on the opposite strand 714/714
(100 %)
8 diff
(98.9 %id)
DB499469 hypothalamus .b 37 to 512 1 to 476       476/476
(100 %)
4 diff
(99.2 %id)
DB501727.
matches multiple genes
hypothalamus .b 70 to 540 1 to 471     also hits gene HDAC7 471/473
(99 %)
3 diff
(99.4 %id)
DB502316.
matches multiple genes
hypothalamus .a-u 1 to 474 1 to 474   tiling clone, also hits gene slyjeyby 474/474
(100 %)
3 diff
(99.4 %id)
BQ639725 eye, retina .b 993 to 1585 9 to 602       594/602
(98 %)
6 diff
(99.1 %id)
T08343   .b 166 to 560 1 to 400       400/407
(98 %)
6 diff
(98.6 %id)
BP252490 Kidney .b 1396 to 1977 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA600313   .b 62 to 629 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
R60876 whole brain .b 2724 to 3044 328 to 8       321/328
(97 %)
0 diff
(100 %id)
R67299 whole brain .b 1783 to 2200 1 to 421       421/423
(99 %)
14 diff
(96.7 %id)
T78490 liver and spleen .b 2845 to 3044 198 to 4       195/198
(98 %)
0 diff
(100 %id)
T78574 liver and spleen .b 2035 to 2380 1 to 349       349/349
(100 %)
14 diff
(96.0 %id)
H14189.
matches multiple genes
brain .b 2640 to 3019 379 to 1     also hits gene CREB3L1 379/379
(100 %)
18 diff
(95.3 %id)
H14185 brain .b 1594 to 2015 1 to 430       430/430
(100 %)
15 diff
(96.6 %id)
H14242 brain .b 2711 to 3004 295 to 1       295/295
(100 %)
10 diff
(96.7 %id)
H14266 brain .b 1594 to 1986 1 to 409       409/479
(85 %)
25 diff
(94.8 %id)
R88236 brain .b 1661 to 2099 1 to 444       444/447
(99 %)
8 diff
(98.3 %id)
R88237 brain .b 2698 to 3033 345 to 11       335/345
(97 %)
6 diff
(98.3 %id)
H18096 brain .b 1507 to 1963 459 to 1   fully sequenced,   459/459
(100 %)
7 diff
(98.5 %id)
H18136 brain .b 1207 to 1537 1 to 335   fully sequenced,   335/335
(100 %)
7 diff
(98.0 %id)
H40500 brain .b 2675 to 3042 375 to 1       375/375
(100 %)
19 diff
(95.0 %id)
H44906 brain .b 2522 to 2873 1 to 358       358/369
(97 %)
10 diff
(97.3 %id)
H51931 brain .b 1603 to 2052 1 to 466       466/499
(93 %)
37 diff
(92.6 %id)
H30304 brain .b 1661 to 2087 1 to 431       431/434
(99 %)
10 diff
(97.7 %id)
N53583 liver and spleen .b 1464 to 1962 505 to 1       505/505
(100 %)
11 diff
(97.9 %id)
N72544 liver and spleen .b 1033 to 1295 1 to 260       260/263
(98 %)
13 diff
(95.1 %id)
N52011 multiple sclerosis lesions .b 1807 to 1966 167 to 1   fully sequenced,   167/167
(100 %)
4 diff
(97.7 %id)
N54625 multiple sclerosis lesions .b 1580 to 1837 1 to 259   fully sequenced,   259/259
(100 %)
1 diff
(99.7 %id)
AA292297 ovarian tumor, ovary .b 2866 to 3042 176 to 1       176/176
(100 %)
2 diff
(98.9 %id)
AA399199 ovarian tumor, ovary .b 2842 to 3043 9 to 208       200/208
(96 %)
6 diff
(97.2 %id)
AA477736 ovarian tumor, ovary .b 2927 to 3044 118 to 1   fully sequenced,   118/118
(100 %)
2 diff
(98.4 %id)
AA477841 ovarian tumor, ovary .b 2844 to 3043 1 to 197   fully sequenced,   197/197
(100 %)
3 diff
(98.5 %id)
AA477354 ovarian tumor, ovary .b 2875 to 3043 1 to 168       168/168
(100 %)
6 diff
(96.5 %id)
AA477109 ovarian tumor, ovary .b 2867 to 3044 178 to 1       178/178
(100 %)
1 diff
(99.5 %id)
AA400951 ovarian tumor, ovary .b 2913 to 3044 129 to 1   fully sequenced,   129/129
(100 %)
2 diff
(98.5 %id)
AA401030 ovarian tumor, ovary .b 2842 to 3043 10 to 206   fully sequenced,   197/206
(95 %)
6 diff
(97.1 %id)
AA421998 ovarian tumor, ovary .b 2843 to 3027 1 to 182       182/182
(100 %)
6 diff
(96.8 %id)
AA480054 ovarian tumor, ovary .b 2910 to 3042 132 to 1   fully sequenced,   132/132
(100 %)
2 diff
(98.5 %id)
AA481908 ovarian tumor, ovary .b 2845 to 3043 14 to 210   fully sequenced,   197/210
(93 %)
6 diff
(97.2 %id)
AA444052 ovarian tumor, ovary .b 2864 to 3044 180 to 1       180/180
(100 %)
3 diff
(98.4 %id)
AA431621   .b 1488 to 1922 1 to 434       434/434
(100 %)
2 diff
(99.6 %id)
AA563601 colon .b 2612 to 3046 436 to 3       434/436
(99 %)
0 diff
(100 %id)
AA931421 Kidney .b 1792 to 1962 171 to 1       171/171
(100 %)
0 diff
(100 %id)
AI091459 pooled .b 1529 to 1962 449 to 16   AAA   434/434
(100 %)
5 diff
(98.9 %id)
AA975921 carcinoid, lung .b 1522 to 1965 456 to 8       449/479
(93 %)
0 diff
(100 %id)
AA938896 pooled .b 1645 to 1965 320 to 1       320/320
(100 %)
2 diff
(99.4 %id)
AI025281   .b 1625 to 1965 345 to 4       342/345
(99 %)
0 diff
(100 %id)
AI051959 liver and spleen .b 1487 to 1965 479 to 1       479/479
(100 %)
2 diff
(99.6 %id)
AI085035 liver and spleen .b 1687 to 1965 278 to 1       278/280
(99 %)
3 diff
(99.0 %id)
AI090613 heart .b 1681 to 1965 285 to 1       285/285
(100 %)
1 diff
(99.7 %id)
AI365373 pooled germ cell tumors .b 2738 to 3045 308 to 1       308/308
(100 %)
0 diff
(100 %id)
AI360169 anaplastic oligodendroglioma, brain .b 1501 to 1962 462 to 1       462/462
(100 %)
1 diff
(99.8 %id)
AI261280 Kidney .b 1487 to 1962 476 to 1       476/476
(100 %)
1 diff
(99.8 %id)
AI399636 Prostate .b 1605 to 1960 356 to 1       356/356
(100 %)
0 diff
(100 %id)
AI439225 lymph node, lymphoma, follicular mixed small and largecell .b 1691 to 1962 302 to 31   AAA   272/280
(97 %)
13 diff
(95.4 %id)
AI800320 Kidney .b 1600 to 1960 362 to 2       361/362
(99 %)
0 diff
(100 %id)
AI536975 anaplastic oligodendroglioma, brain .b 1673 to 1965 305 to 13   AAA   293/293
(100 %)
1 diff
(99.7 %id)
AI500379 anaplastic oligodendroglioma, brain .b 2738 to 3043 306 to 1       306/306
(100 %)
0 diff
(100 %id)
AI538345 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 1727 to 1962 273 to 38   AAA   236/236
(100 %)
9 diff
(96.2 %id)
AI658637 Prostate .b 1605 to 1959 355 to 1       355/355
(100 %)
2 diff
(99.5 %id)
AI610091 brain, tumor, 5 pooled (see description) .b 2680 to 3009 331 to 1       331/331
(100 %)
10 diff
(97.0 %id)
AI631013 carcinoid, lung .b 1514 to 1965 459 to 8       452/459
(98 %)
0 diff
(100 %id)
AI631025 carcinoid, lung .b 1515 to 1965 458 to 8       451/458
(98 %)
0 diff
(100 %id)
AI654433 pooled germ cell tumors .b 1606 to 1965 371 to 12   AAA   360/360
(100 %)
3 diff
(99.2 %id)
AI669910 Prostate .b 1724 to 1958 235 to 1       235/235
(100 %)
2 diff
(99.2 %id)
AI761098 2 pooled tumors (clear cell type), Kidney .b 1199 to 1492 321 to 29       293/321
(91 %)
0 diff
(100 %id)
AI970917 Prostate .b 1723 to 1959 254 to 18   AAA   237/239
(99 %)
2 diff
(99.2 %id)
AW044642 pooled .b 1489 to 1962 499 to 26   AAA   474/474
(100 %)
21 diff
(95.6 %id)
AW005692 anaplastic oligodendroglioma, brain .b 1610 to 1962 369 to 17   AAA   353/358
(98 %)
16 diff
(95.6 %id)
AW149696 brain, medulloblastoma .b 2583 to 3045 464 to 1       464/464
(100 %)
2 diff
(99.6 %id)
AW139764   .b 2726 to 3043 335 to 18   AAA   318/318
(100 %)
0 diff
(100 %id)
AW449302   .b 2726 to 3043 335 to 18   AAA   318/318
(100 %)
0 diff
(100 %id)
AW261833 brain, three pooled meningiomas .b 2730 to 3009 280 to 1       280/280
(100 %)
0 diff
(100 %id)
AW262880 brain, three pooled meningiomas .b 2722 to 3009 288 to 1       288/502
(57 %)
0 diff
(100 %id)
AW328370 cervix .b 1011 to 1558 2 to 549   fully sequenced,   548/549
(99 %)
5 diff
(99.1 %id)
AW328371 cervix .b 1528 to 1962 455 to 21   fully sequenced, AAA   435/435
(100 %)
1 diff
(99.8 %id)
AW418812 2 pooled tumors (clear cell type), Kidney .b 2722 to 3044 325 to 3       323/325
(99 %)
0 diff
(100 %id)
BE300611 carcinoma cell line, cervix .b 459 to 806 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
BE336713 Kidney, renal cell adenocarcinoma .b 96 to 623 1 to 527       527/527
(100 %)
4 diff
(99.3 %id)
AW780013 Kidney .b 1697 to 1955 265 to 7       259/265
(97 %)
0 diff
(100 %id)
BF512115   .b 2726 to 3045 335 to 16   AAA   320/320
(100 %)
0 diff
(100 %id)
BF510591   .b 1856 to 1965 127 to 18   AAA   110/112
(98 %)
5 diff
(95.6 %id)
BE046050 follicular carcinoma, thyroid .b 1553 to 1963 411 to 1       411/411
(100 %)
2 diff
(99.6 %id)
BE219786 carcinoid, lung .b 1504 to 1965 469 to 8       462/469
(98 %)
0 diff
(100 %id)
BE550127 carcinoid, lung .b 2730 to 3044 319 to 5       315/321
(98 %)
0 diff
(100 %id)
CB047884 Prostate .b 1173 to 1796 10 to 633       624/633
(98 %)
6 diff
(99.1 %id)
BF939836 brain, glioblastoma (pooled) .b 2727 to 3044 320 to 3       318/320
(99 %)
0 diff
(100 %id)
BE295778 muscle, rhabdomyosarcoma .b 1212 to 1771 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
BF195234 carcinoid, lung .b 1462 to 1965 514 to 11       504/526
(95 %)
0 diff
(100 %id)
BE379503 endometrium, adenocarcinoma cell line, uterus .b 2033 to 2735 45 to 746       702/810
(86 %)
15 diff
(98.2 %id)
BE379398 endometrium, adenocarcinoma cell line, uterus .b 268 to 959 42 to 735       694/738
(94 %)
20 diff
(97.3 %id)
BE379095 endometrium, adenocarcinoma cell line, uterus .b 1632 to 2430 1 to 803       803/1075
(74 %)
36 diff
(96.7 %id)
BE378189 endometrium, adenocarcinoma cell line, uterus .b 1162 to 1874 1 to 705       705/731
(96 %)
14 diff
(98.1 %id)
BE391429 endometrium, adenocarcinoma cell line, uterus .b 1443 to 1963 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
BE390668 endometrium, adenocarcinoma cell line, uterus .b 1270 to 1959 1 to 686       686/781
(87 %)
33 diff
(95.8 %id)
BE388191 endometrium, adenocarcinoma cell line, uterus .b 2021 to 2727 1 to 709       709/783
(90 %)
18 diff
(97.8 %id)
BE393043 endometrium, adenocarcinoma cell line, uterus .b 2021 to 2505 1 to 484       484/484
(100 %)
1 diff
(99.8 %id)
BE395531 endometrium, adenocarcinoma cell line, uterus .b 940 to 1496 1 to 557       557/557
(100 %)
0 diff
(100 %id)
BE395475 endometrium, adenocarcinoma cell line, uterus .b 1121 to 1436 1 to 315       315/315
(100 %)
1 diff
(99.7 %id)
BE393542 endometrium, adenocarcinoma cell line, uterus .b 2521 to 3042 1 to 523       523/523
(100 %)
5 diff
(99.1 %id)
BC002759 Uterus, endometrium adenocarcinoma .c 1 to 1023 1 to 1023 exact tiling clone, available from MGC, AAA   1023/1023
(100 %)
0 diff
(100 %id)
BE394410 endometrium, adenocarcinoma cell line, uterus .c 20 to 573 1 to 554 exact available from MGC,   554/554
(100 %)
6 diff
(99.0 %id)
BE394013 endometrium, adenocarcinoma cell line, uterus .b 1019 to 1667 1 to 643       643/688
(93 %)
11 diff
(98.5 %id)
BC011823 Uterus, endometrium adenocarcinoma .b 187 to 1962 1 to 1777   AAA   1777/1777
(100 %)
1 diff
(100.0 %id)
BE563089 endometrium, adenocarcinoma cell line, uterus .b 189 to 776 47 to 633       587/633
(92 %)
6 diff
(99.1 %id)
BE742497 adenocarcinoma cell line, ovary .b 2079 to 2923 1 to 829       829/860
(96 %)
55 diff
(93.7 %id)
BE789444 large cell carcinoma, lung .b 100 to 769 1 to 681       679/682
(99 %)
28 diff
(95.9 %id)
BF967168 brain, hypothalamus .b 1 to 241 1 to 237   tiling clone,   237/237
(100 %)
16 diff
(93.3 %id)
BG164568 hypernephroma, cell line, Kidney .b 2066 to 2889 1 to 808       808/911
(88 %)
21 diff
(97.7 %id)
BG285113 adenocarcinoma, cell line, Prostate .b 1125 to 1478 280 to 632       353/645
(54 %)
4 diff
(99.4 %id)
BG331067 large cell carcinoma, lung .b 2047 to 2735 1 to 688       688/794
(86 %)
14 diff
(98.3 %id)
BG432623 Kidney .b 67 to 740 1 to 680       680/681
(99 %)
27 diff
(96.1 %id)
BG436769 large cell carcinoma, lung .i 45 to 812 1 to 768 exact tiling clone,   768/805
(95 %)
17 diff
(97.9 %id)
BG437664 large cell carcinoma, lung .b 83 to 808 1 to 730       730/900
(81 %)
10 diff
(98.9 %id)
BG706031 brain, hypothalamus .b 62 to 851 1 to 794       794/822
(96 %)
20 diff
(97.6 %id)
BG715291 brain, hypothalamus .b 62 to 836 1 to 826       686/878
(78 %)
42 diff
(95.3 %id)
BG700298 brain, hippocampus .b 83 to 677 1 to 595       595/595
(100 %)
4 diff
(99.4 %id)
BG700535 brain, hippocampus .b 46 to 831 1 to 788   AAA   788/823
(95 %)
22 diff
(97.4 %id)
BG701175 brain, hippocampus .b 59 to 771 1 to 714       714/931
(76 %)
16 diff
(98.3 %id)
BG699740 brain, hippocampus .b 7 to 810 1 to 802 E96D D97G L98P A99G Q100S ...     802/810
(99 %)
21 diff
(97.5 %id)
BG704154 brain, hippocampus .b 33 to 779 1 to 744 L164I     744/771
(96 %)
18 diff
(97.7 %id)
BG749025 eye, normal pigmented retinal epithelium .b 84 to 674 1 to 591       591/593
(99 %)
4 diff
(99.4 %id)
BG824138 adenocarcinoma cell line, colon .e 33 to 784 1 to 761 E39R D40G L41P A42G Q43S ... tiling clone,   761/768
(99 %)
14 diff
(98.2 %id)
BG818930 anaplastic oligodendroglioma with 1p/19qloss, brain .b 13 to 562 1 to 543 P7R A8W G9R G10F F11G ...     543/543
(100 %)
12 diff
(97.8 %id)
BG910598 anaplastic oligodendroglioma with 1p/19qloss, brain .b 2798 to 3044 18 to 262       245/277
(88 %)
3 diff
(99.0 %id)
BI489938 pooled brain, lung, testis .b 1051 to 1749 57 to 753       697/754
(92 %)
34 diff
(95.5 %id)
BI490084 pooled brain, lung, testis .b 1097 to 1727 106 to 729       624/729
(85 %)
26 diff
(96.5 %id)
BI818578 pooled brain, lung, testis .b 66 to 830 1 to 773       773/861
(89 %)
9 diff
(99.0 %id)
BI819172 pooled brain, lung, testis .b 90 to 851 1 to 769       769/932
(82 %)
26 diff
(97.3 %id)
BI760918 pooled colon, kidney, stomach .b 2234 to 3002 1 to 770       770/770
(100 %)
5 diff
(99.4 %id)
BI761530 pooled colon, kidney, stomach .e 1 to 580 8 to 587   tiling clone,   587/587
(100 %)
1 diff
(99.9 %id)
BI757285 brain .b 90 to 856 1 to 773       773/890
(86 %)
16 diff
(98.3 %id)
BI770244 pooled lung and spleen .h 1 to 882 1 to 889 exact tiling clone,   889/889
(100 %)
12 diff
(98.7 %id)
BI545872 brain, hippocampus .b 62 to 679 1 to 611       611/611
(100 %)
11 diff
(98.2 %id)
BI548780 brain, hippocampus .b 9 to 564 1 to 557 R44S     557/557
(100 %)
4 diff
(99.3 %id)
BI549178 brain, hippocampus .b 33 to 675 1 to 642 H72M R74G A75L R76A R77G ...     642/642
(100 %)
7 diff
(99.0 %id)
BI551070 brain, hippocampus .b 62 to 799 1 to 738       738/738
(100 %)
8 diff
(99.0 %id)
BI457968 brain, hypothalamus .b 62 to 737 1 to 676       676/677
(99 %)
6 diff
(99.2 %id)
BI596333 brain, hypothalamus .b 64 to 834 1 to 768       768/769
(99 %)
8 diff
(99.0 %id)
BI604223 brain, hypothalamus .b 32 to 836 1 to 805 exact     805/805
(100 %)
11 diff
(98.7 %id)
BI600918 brain, hypothalamus .b 61 to 831 1 to 751       751/870
(86 %)
23 diff
(97.4 %id)
BI603129 brain, hypothalamus .b 62 to 831 1 to 770       770/771
(99 %)
13 diff
(98.4 %id)
BI670201 brain, hypothalamus .b 62 to 776 1 to 709       709/922
(76 %)
18 diff
(98.1 %id)
BI668229 brain, hypothalamus .b 32 to 773 1 to 740 exact     740/740
(100 %)
11 diff
(98.6 %id)
BM908385 astrocytoma grade IV, cell line, brain .b 837 to 1643 1 to 803       803/1104
(72 %)
7 diff
(99.4 %id)
BM910158 astrocytoma grade IV, cell line, brain .b 852 to 1389 19 to 564       546/1001
(54 %)
16 diff
(98.5 %id)
BM799601 eye, retinoblastoma .i 1 to 385 6 to 390 exact tiling clone,   866/1093
(79 %)
10 diff
(99.1 %id)
BM471539 leiomyosarcoma, uterus .b 1820 to 2559 40 to 787       748/1137
(65 %)
28 diff
(97.6 %id)
BM023605 Islets of Langerhans, Pancreas .b 1366 to 1926 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
CK904502 Islets of Langerhans, Pancreas .b 1350 to 1895 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
BM544793 brain, hippocampus .b 109 to 1033 22 to 953       932/1064
(87 %)
37 diff
(96.6 %id)
BM805284 brain, hippocampus .b 73 to 774 64 to 770       707/1244
(56 %)
22 diff
(98.3 %id)
BM551269 duodenal adenocarcinoma, cell line, small intestine .g 494 to 1427 1 to 942   tiling clone,   942/1073
(87 %)
41 diff
(96.2 %id)
BQ014881 Chondrosarcoma, Left Pubic Bone .b 1366 to 1962 615 to 19   AAA   597/597
(100 %)
16 diff
(97.4 %id)
BM990843 lung, Lung Focal Fibrosis .b 837 to 1494 23 to 680     Submitted on the opposite strand 658/680
(96 %)
6 diff
(99.2 %id)
BQ029319 lung, Metastatic Chondrosarcoma .b 1474 to 1962 507 to 19   AAA   489/489
(100 %)
7 diff
(98.6 %id)
BM992255 Bone, Subchondral Bone .b 1366 to 1962 615 to 19   AAA   597/597
(100 %)
0 diff
(100 %id)
BQ001812 Fibrosarcoma .b 2637 to 3043 426 to 19   AAA   408/408
(100 %)
3 diff
(99.3 %id)
BQ221544 large cell carcinoma, lung .b 1874 to 2612 1 to 743       743/809
(91 %)
9 diff
(98.9 %id)
BU159425 epithelioid carcinoma, Pancreas .b 30 to 691 1 to 668 exact     668/851
(78 %)
12 diff
(98.6 %id)
BU193023 eye, retinoblastoma .b 264 to 1136 1 to 884       884/899
(98 %)
30 diff
(96.7 %id)
BU155333 melanotic melanoma, skin .b 67 to 877 1 to 819       819/904
(90 %)
25 diff
(97.3 %id)
BU839129 melanotic melanoma, cell line, skin .b 1264 to 1965 1 to 703       703/708
(99 %)
3 diff
(99.6 %id)
BU539079 adenocarcinoma, cell line, breast .b 333 to 1205 13 to 899       887/1007
(88 %)
36 diff
(96.5 %id)
CB959994 Human Placenta, placenta .b 50 to 800 24 to 786       763/817
(93 %)
30 diff
(96.4 %id)
CK000146 mixed .b 2304 to 3043 1 to 740   AAA   740/740
(100 %)
5 diff
(99.4 %id)
TI_57221592   .b 83 to 856 54 to 833       780/950
(82 %)
19 diff
(98.0 %id)
TI_43960656   .b 1109 to 1749 205 to 843       754/844
(89 %)
20 diff
(97.7 %id)
TI_43961017   .b 1097 to 1727 169 to 792     Submitted on the opposite strand 624/792
(78 %)
26 diff
(96.8 %id)
TI_57196612   .b 66 to 830 30 to 802       773/890
(86 %)
14 diff
(98.5 %id)
TI_57199565   .b 83 to 851 53 to 828       776/991
(78 %)
31 diff
(96.9 %id)
TI_57146422   .b 2234 to 3002 35 to 804       770/804
(95 %)
6 diff
(99.3 %id)
TI_57149334   .e 1 to 580 38 to 617       587/617
(95 %)
7 diff
(98.9 %id)
TI_57180102   .h 1 to 882 69 to 957 exact     889/957
(92 %)
18 diff
(98.2 %id)
TI_44165883   .b 67 to 679 141 to 746       606/746
(81 %)
12 diff
(98.4 %id)
TI_44166801   .b 11 to 564 120 to 674 R44S     555/674
(82 %)
7 diff
(99.0 %id)
TI_44166879   .b 34 to 675 117 to 757 H72M R74G A75L R76A R77G ...     641/757
(84 %)
7 diff
(99.1 %id)
TI_45208936   .b 65 to 834 84 to 850       767/851
(90 %)
13 diff
(98.5 %id)
TI_45213660   .b 37 to 836 89 to 888 exact     800/888
(90 %)
13 diff
(98.6 %id)
TI_45214198   .b 67 to 831 79 to 823       745/942
(79 %)
22 diff
(97.7 %id)
TI_45216549   .b 67 to 831 128 to 892       765/893
(85 %)
14 diff
(98.5 %id)
TI_44344903   .b 67 to 776 88 to 791       704/1004
(70 %)
20 diff
(98.1 %id)
TI_44346371   .b 37 to 773 85 to 819 exact     735/819
(89 %)
13 diff
(98.5 %id)
BP272974   .b 37 to 599 1 to 563 A8V G10V P23S R110G     563/563
(100 %)
6 diff
(99.0 %id)
BP273263   .b 37 to 614 1 to 578 T15F R110G     578/578
(100 %)
4 diff
(99.4 %id)
BY995117   .b 1436 to 1961 13 to 538       526/538
(97 %)
4 diff
(99.3 %id)
BP300514   .b 86 to 651 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BP304452   .b 55 to 637 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
BP306043   .b 38 to 618 1 to 581 exact     581/581
(100 %)
4 diff
(99.4 %id)
EB386361 eye, optic nerve .c 296 to 973 1 to 678       678/678
(100 %)
0 diff
(100 %id)
EB386845 eye, optic nerve .b 366 to 841 1 to 476       476/476
(100 %)
3 diff
(99.4 %id)
NM_017842.2   .b 13 to 3046 1 to 3034 exact RefSeq,   3034/3034
(100 %)
0 diff
(100 %id)
DA701866   .b 64 to 516 2 to 454   capped   453/453
(100 %)
1 diff
(99.8 %id)
DA718021   .b 69 to 625 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA808831 brain .b 43 to 578 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BP332034 renal proximal tubule .b 1747 to 2326 1 to 580       580/580
(100 %)
9 diff
(98.5 %id)
CR976467 T-Lymphocytes .b 65 to 828 1 to 764       764/769
(99 %)
5 diff
(99.4 %id)
BM746983 stomach .b 1355 to 1951 1 to 594       594/594
(100 %)
5 diff
(99.2 %id)
BM744701 stomach .b 1355 to 1932 1 to 575       575/575
(100 %)
4 diff
(99.4 %id)
BM793356 Ascites, stomach .b 2412 to 3020 1 to 610       610/611
(99 %)
12 diff
(98.1 %id)
TI_1948098187   .b 519 to 914 126 to 524       399/1413
(28 %)
19 diff
(98.7 %id)
TI_1948214100   .b 133 to 578 152 to 596       445/1304
(34 %)
12 diff
(99.1 %id)
TI_1948214675   .b 133 to 573 126 to 566       441/1391
(31 %)
11 diff
(99.3 %id)
TI_1948214676   .b 133 to 573 135 to 576       442/581
(76 %)
8 diff
(98.7 %id)
DA917668 small intestine .b 895 to 1454 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DR006824 Spleen .b 89 to 672 8 to 592       585/592
(98 %)
7 diff
(98.9 %id)
DB010591 colon, tumor tissue .b 87 to 652 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB013693 esophageal, tumor tissue .b 55 to 618 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB049681 testis .f 1 to 566 2 to 567 D82N tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB115746 thymus .b 71 to 528 2 to 459   capped   458/458
(100 %)
2 diff
(99.6 %id)
DB125617 thymus .b 70 to 558 2 to 491   capped   490/490
(100 %)
1 diff
(99.8 %id)
DB131454 thymus .b 38 to 583 2 to 547 F150S capped   546/551
(99 %)
2 diff
(99.7 %id)
DB134783 thymus .b 85 to 638 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
TI_149272553   .b 1075 to 1962 958 to 84   AAA   875/1016
(86 %)
19 diff
(98.2 %id)
TI_154036092   .b 2308 to 3043 820 to 87   AAA   734/939
(78 %)
26 diff
(97.3 %id)
DB169602 kidney, tumor tissue .b 37 to 488 38 to 489   capped   452/488
(92 %)
6 diff
(98.8 %id)
DB171738 kidney, tumor tissue .b 89 to 647 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BQ022758 placenta .b 1740 to 1962 241 to 19   AAA   223/223
(100 %)
2 diff
(99.2 %id)
BU675157 lung, Primary Lung Epithelial Cells .b 1258 to 1962 722 to 19   AAA   704/704
(100 %)
1 diff
(99.9 %id)
CA310633 Human Lung Epithelial cells, lung .b 2338 to 3043 724 to 19   AAA   706/706
(100 %)
4 diff
(99.5 %id)
CA312076 Human Lung Epithelial cells, lung .b 2338 to 3043 724 to 19   AAA   706/706
(100 %)
2 diff
(99.8 %id)
CN478476 eye, lens .b 2723 to 3043 339 to 19   AAA   321/321
(100 %)
1 diff
(99.7 %id)
BM698761 eye, fetal eyes .b 2065 to 2479 1 to 415       415/415
(100 %)
3 diff
(99.3 %id)
BU737221 eye, fetal eyes .b 2610 to 3045 452 to 17   AAA   436/438
(99 %)
5 diff
(98.9 %id)
BU737434 eye, fetal eyes .b 2727 to 3045 335 to 17   AAA   319/319
(100 %)
0 diff
(100 %id)
BM713478 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1148 to 1761 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
BM726407 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2549 to 3045 1 to 497   AAA   497/497
(100 %)
0 diff
(100 %id)
CA436533 Bone, Subchondral Bone .b 1643 to 1962 338 to 19   AAA   320/320
(100 %)
5 diff
(98.5 %id)
CA440541 lung, Lung Focal Fibrosis .b 1729 to 1962 1 to 234   AAA Submitted on the opposite strand 234/234
(100 %)
6 diff
(97.5 %id)
CN480465 lung, Lung Focal Fibrosis .b 1729 to 1962 1 to 234   AAA Submitted on the opposite strand 234/234
(100 %)
6 diff
(97.5 %id)
CA444321 lung, Metastatic Chondrosarcoma .b 2724 to 3043 338 to 19   AAA   320/320
(100 %)
0 diff
(100 %id)
BU625226 cell lines, Enchondroma .b 2736 to 3043 326 to 19   AAA   308/308
(100 %)
0 diff
(100 %id)
BU625285 cell lines, Enchondroma .b 1459 to 1962 522 to 19   AAA   504/504
(100 %)
1 diff
(99.9 %id)
BU625550 cell lines, Enchondroma .b 1209 to 1962 771 to 19   AAA   753/753
(100 %)
2 diff
(99.8 %id)
TI_151773916.
matches multiple genes
  .b 2058 to 2602 102 to 649     also hits gene METAP1 548/890
(61 %)
10 diff
(98.9 %id)
TI_151772913   .b 2065 to 2710 79 to 728       650/1320
(49 %)
10 diff
(99.3 %id)
BP380468   .i 50 to 799 1 to 748 I40T I61T tiling clone,   748/750
(99 %)
23 diff
(97.0 %id)
AK294075 alzheimer cortex .b 1820 to 2559 40 to 787     Suspected internal deletion, this clone was ignored 748/1137
(65 %)
28 diff
(97.6 %id)
BF809579 colon_ins .b 1366 to 1926 1 to 561     This clone was ignored 561/561
(100 %)
1 diff
(99.9 %id)
DC311164 alzheimer cortex .b 1366 to 1926 1 to 561     Suspected internal deletion, this clone was ignored 561/561
(100 %)
1 diff
(99.9 %id)
DA258229 caudate nucleus .b 1350 to 1895 1 to 546   capped Suspected internal deletion, this clone was ignored 546/546
(100 %)
1 diff
(99.9 %id)
BP212268 cerebrum .b 1350 to 1895 1 to 546     Suspected internal deletion, this clone was ignored 546/546
(100 %)
1 diff
(99.9 %id)
AL561663 B cells from Burkitt lymphoma .b 109 to 1033 22 to 953     This clone was ignored 932/1064
(87 %)
37 diff
(96.6 %id)
DB571293.
matches multiple genes
hypothalamus .b 109 to 1033 22 to 953     Suspected internal deletion, this clone was ignored, also hits gene HDAC7 932/1064
(87 %)
37 diff
(96.6 %id)
DB571293.
matches multiple genes
hypothalamus .b 73 to 774 64 to 770     Suspected internal deletion, this clone was ignored, also hits gene HDAC7 707/1244
(56 %)
22 diff
(98.3 %id)
DB728034.
matches multiple genes
hypothalamus .b 73 to 774 64 to 770     Suspected internal deletion, this clone was ignored, also hits gene HDAC7 707/1244
(56 %)
22 diff
(98.3 %id)
DB728034.
matches multiple genes
hypothalamus .g 494 to 1427 1 to 942   tiling clone, Suspected internal deletion, this clone was ignored, also hits gene HDAC7 942/1073
(87 %)
41 diff
(96.2 %id)
BM908403 astrocytoma grade IV, cell line, brain .g 494 to 1427 1 to 942   tiling clone, Suspected internal deletion, this clone was ignored 942/1073
(87 %)
41 diff
(96.2 %id)
BP362386 thalamus .b 1366 to 1962 615 to 19     Suspected internal deletion, this clone was ignored 597/597
(100 %)
16 diff
(97.4 %id)
BP368376 thymus .b 1366 to 1962 615 to 19     Suspected internal deletion, this clone was ignored 597/597
(100 %)
16 diff
(97.4 %id)
BM990843 lung, Lung Focal Fibrosis .b 837 to 1494 23 to 680     Submitted on the opposite strand 658/680
(96 %)
6 diff
(99.2 %id)
BM990843 lung, Lung Focal Fibrosis .b 837 to 1494 23 to 680     Submitted on the opposite strand 658/680
(96 %)
6 diff
(99.2 %id)
BQ029319 lung, Metastatic Chondrosarcoma .b 1474 to 1962 507 to 19   AAA   489/489
(100 %)
7 diff
(98.6 %id)
BQ029319 lung, Metastatic Chondrosarcoma .b 1474 to 1962 507 to 19   AAA   489/489
(100 %)
7 diff
(98.6 %id)
BM992255 Bone, Subchondral Bone .b 1366 to 1962 615 to 19   AAA   597/597
(100 %)
0 diff
(100 %id)
BM992255 Bone, Subchondral Bone .b 1366 to 1962 615 to 19   AAA   597/597
(100 %)
0 diff
(100 %id)
BQ001812 Fibrosarcoma .b 2637 to 3043 426 to 19   AAA   408/408
(100 %)
3 diff
(99.3 %id)
BQ221544 large cell carcinoma, lung .b 1874 to 2612 1 to 743       743/809
(91 %)
9 diff
(98.9 %id)
BQ221544 large cell carcinoma, lung .b 1874 to 2612 1 to 743       743/809
(91 %)
9 diff
(98.9 %id)
BU159425 epithelioid carcinoma, Pancreas .b 30 to 691 1 to 668 exact     668/851
(78 %)
12 diff
(98.6 %id)
BU159425 epithelioid carcinoma, Pancreas .b 30 to 691 1 to 668 exact     668/851
(78 %)
12 diff
(98.6 %id)
BU193023 eye, retinoblastoma .b 264 to 1136 1 to 884       884/899
(98 %)
30 diff
(96.7 %id)
BU193023 eye, retinoblastoma .b 264 to 1136 1 to 884       884/899
(98 %)
30 diff
(96.7 %id)
BU155333 melanotic melanoma, skin .b 67 to 877 1 to 819       819/904
(90 %)
25 diff
(97.3 %id)
BU155333 melanotic melanoma, skin .b 67 to 877 1 to 819       819/904
(90 %)
25 diff
(97.3 %id)
BU839129 melanotic melanoma, cell line, skin .b 1264 to 1965 1 to 703       703/708
(99 %)
3 diff
(99.6 %id)
BU839129 melanotic melanoma, cell line, skin .b 1264 to 1965 1 to 703       703/708
(99 %)
3 diff
(99.6 %id)
BU539079 adenocarcinoma, cell line, breast .b 333 to 1205 13 to 899       887/1007
(88 %)
36 diff
(96.5 %id)
BU539079 adenocarcinoma, cell line, breast .b 333 to 1205 13 to 899       887/1007
(88 %)
36 diff
(96.5 %id)
CB959994 Human Placenta, placenta .b 50 to 800 24 to 786       763/817
(93 %)
30 diff
(96.4 %id)
CB959994 Human Placenta, placenta .b 50 to 800 24 to 786       763/817
(93 %)
30 diff
(96.4 %id)
CK000146 mixed .b 2304 to 3043 1 to 740   AAA   740/740
(100 %)
5 diff
(99.4 %id)
TI_57221592   .b 83 to 856 54 to 833       780/950
(82 %)
19 diff
(98.0 %id)
TI_43960656   .b 1109 to 1749 205 to 843       754/844
(89 %)
20 diff
(97.7 %id)
TI_43961017   .b 1097 to 1727 169 to 792     Submitted on the opposite strand 624/792
(78 %)
26 diff
(96.8 %id)
TI_57196612   .b 66 to 830 30 to 802       773/890
(86 %)
14 diff
(98.5 %id)
TI_57199565   .b 83 to 851 53 to 828       776/991
(78 %)
31 diff
(96.9 %id)
TI_57146422   .b 2234 to 3002 35 to 804       770/804
(95 %)
6 diff
(99.3 %id)
TI_57149334   .e 1 to 580 38 to 617       587/617
(95 %)
7 diff
(98.9 %id)
TI_57180102   .h 1 to 882 69 to 957 exact     889/957
(92 %)
18 diff
(98.2 %id)
TI_44165883   .b 67 to 679 141 to 746       606/746
(81 %)
12 diff
(98.4 %id)
TI_44166801   .b 11 to 564 120 to 674 R44S     555/674
(82 %)
7 diff
(99.0 %id)
TI_44166879   .b 34 to 675 117 to 757 H72M R74G A75L R76A R77G ...     641/757
(84 %)
7 diff
(99.1 %id)
TI_45208936   .b 65 to 834 84 to 850       767/851
(90 %)
13 diff
(98.5 %id)
TI_45213660   .b 37 to 836 89 to 888 exact     800/888
(90 %)
13 diff
(98.6 %id)
TI_45214198   .b 67 to 831 79 to 823       745/942
(79 %)
22 diff
(97.7 %id)
TI_45216549   .b 67 to 831 128 to 892       765/893
(85 %)
14 diff
(98.5 %id)
TI_44344903   .b 67 to 776 88 to 791       704/1004
(70 %)
20 diff
(98.1 %id)
TI_44346371   .b 37 to 773 85 to 819 exact     735/819
(89 %)
13 diff
(98.5 %id)
BP272974   .b 37 to 599 1 to 563 A8V G10V P23S R110G     563/563
(100 %)
6 diff
(99.0 %id)
BP273263   .b 37 to 614 1 to 578 T15F R110G     578/578
(100 %)
4 diff
(99.4 %id)
BY995117   .b 1436 to 1961 13 to 538       526/538
(97 %)
4 diff
(99.3 %id)
BP300514   .b 86 to 651 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BP304452   .b 55 to 637 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
BP306043   .b 38 to 618 1 to 581 exact     581/581
(100 %)
4 diff
(99.4 %id)
EB386361 eye, optic nerve .c 296 to 973 1 to 678       678/678
(100 %)
0 diff
(100 %id)
EB386361 eye, optic nerve .c 296 to 973 1 to 678       678/678
(100 %)
0 diff
(100 %id)
EB386845 eye, optic nerve .b 366 to 841 1 to 476       476/476
(100 %)
3 diff
(99.4 %id)
EB386845 eye, optic nerve .b 366 to 841 1 to 476       476/476
(100 %)
3 diff
(99.4 %id)
NM_017842.2   .b 13 to 3046 1 to 3034 exact RefSeq,   3034/3034
(100 %)
0 diff
(100 %id)
DA701866   .b 64 to 516 2 to 454   capped   453/453
(100 %)
1 diff
(99.8 %id)
DA718021   .b 69 to 625 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA808831 brain .b 43 to 578 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BP332034 renal proximal tubule .b 1747 to 2326 1 to 580       580/580
(100 %)
9 diff
(98.5 %id)
CR976467 T-Lymphocytes .b 65 to 828 1 to 764       764/769
(99 %)
5 diff
(99.4 %id)
BM746983 stomach .b 1355 to 1951 1 to 594       594/594
(100 %)
5 diff
(99.2 %id)
BM744701 stomach .b 1355 to 1932 1 to 575       575/575
(100 %)
4 diff
(99.4 %id)
BM793356 Ascites, stomach .b 2412 to 3020 1 to 610       610/611
(99 %)
12 diff
(98.1 %id)
BM793356 Ascites, stomach .b 2412 to 3020 1 to 610       610/611
(99 %)
12 diff
(98.1 %id)
TI_1948098187   .b 519 to 914 126 to 524       399/1413
(28 %)
19 diff
(98.7 %id)
TI_1948214100   .b 133 to 578 152 to 596       445/1304
(34 %)
12 diff
(99.1 %id)
TI_1948214675   .b 133 to 573 126 to 566       441/1391
(31 %)
11 diff
(99.3 %id)
TI_1948214676   .b 133 to 573 135 to 576       442/581
(76 %)
8 diff
(98.7 %id)
DA917668 small intestine .b 895 to 1454 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DR006824 Spleen .b 89 to 672 8 to 592       585/592
(98 %)
7 diff
(98.9 %id)
DB010591 colon, tumor tissue .b 87 to 652 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB013693 esophageal, tumor tissue .b 55 to 618 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB049681 testis .f 1 to 566 2 to 567 D82N tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
DB115746 thymus .b 71 to 528 2 to 459   capped   458/458
(100 %)
2 diff
(99.6 %id)
DB125617 thymus .b 70 to 558 2 to 491   capped   490/490
(100 %)
1 diff
(99.8 %id)
DB131454 thymus .b 38 to 583 2 to 547 F150S capped   546/551
(99 %)
2 diff
(99.7 %id)
DB134783 thymus .b 85 to 638 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
TI_149272553   .b 1075 to 1962 958 to 84   AAA   875/1016
(86 %)
19 diff
(98.2 %id)
TI_154036092   .b 2308 to 3043 820 to 87   AAA   734/939
(78 %)
26 diff
(97.3 %id)
DB169602 kidney, tumor tissue .b 37 to 488 38 to 489   capped   452/488
(92 %)
6 diff
(98.8 %id)
DB171738 kidney, tumor tissue .b 89 to 647 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BQ022758 placenta .b 1740 to 1962 241 to 19   AAA   223/223
(100 %)
2 diff
(99.2 %id)
BU675157 lung, Primary Lung Epithelial Cells .b 1258 to 1962 722 to 19   AAA   704/704
(100 %)
1 diff
(99.9 %id)
BU675157 lung, Primary Lung Epithelial Cells .b 1258 to 1962 722 to 19   AAA   704/704
(100 %)
1 diff
(99.9 %id)
CA310633 Human Lung Epithelial cells, lung .b 2338 to 3043 724 to 19   AAA   706/706
(100 %)
4 diff
(99.5 %id)
CA310633 Human Lung Epithelial cells, lung .b 2338 to 3043 724 to 19   AAA   706/706
(100 %)
4 diff
(99.5 %id)
CA312076 Human Lung Epithelial cells, lung .b 2338 to 3043 724 to 19   AAA   706/706
(100 %)
2 diff
(99.8 %id)
CA312076 Human Lung Epithelial cells, lung .b 2338 to 3043 724 to 19   AAA   706/706
(100 %)
2 diff
(99.8 %id)
CN478476 eye, lens .b 2723 to 3043 339 to 19   AAA   321/321
(100 %)
1 diff
(99.7 %id)
CN478476 eye, lens .b 2723 to 3043 339 to 19   AAA   321/321
(100 %)
1 diff
(99.7 %id)
BM698761 eye, fetal eyes .b 2065 to 2479 1 to 415       415/415
(100 %)
3 diff
(99.3 %id)
BM698761 eye, fetal eyes .b 2065 to 2479 1 to 415       415/415
(100 %)
3 diff
(99.3 %id)
BU737221 eye, fetal eyes .b 2610 to 3045 452 to 17   AAA   436/438
(99 %)
5 diff
(98.9 %id)
BU737221 eye, fetal eyes .b 2610 to 3045 452 to 17   AAA   436/438
(99 %)
5 diff
(98.9 %id)
BU737434 eye, fetal eyes .b 2727 to 3045 335 to 17   AAA   319/319
(100 %)
0 diff
(100 %id)
BU737434 eye, fetal eyes .b 2727 to 3045 335 to 17   AAA   319/319
(100 %)
0 diff
(100 %id)
BM713478 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1148 to 1761 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
BM713478 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1148 to 1761 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
BM726407 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2549 to 3045 1 to 497   AAA   497/497
(100 %)
0 diff
(100 %id)
BM726407 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2549 to 3045 1 to 497   AAA   497/497
(100 %)
0 diff
(100 %id)
CA436533 Bone, Subchondral Bone .b 1643 to 1962 338 to 19   AAA   320/320
(100 %)
5 diff
(98.5 %id)
CA436533 Bone, Subchondral Bone .b 1643 to 1962 338 to 19   AAA   320/320
(100 %)
5 diff
(98.5 %id)
CA440541 lung, Lung Focal Fibrosis .b 1729 to 1962 1 to 234   AAA Submitted on the opposite strand 234/234
(100 %)
6 diff
(97.5 %id)
CA440541 lung, Lung Focal Fibrosis .b 1729 to 1962 1 to 234   AAA Submitted on the opposite strand 234/234
(100 %)
6 diff
(97.5 %id)
CN480465 lung, Lung Focal Fibrosis .b 1729 to 1962 1 to 234   AAA Submitted on the opposite strand 234/234
(100 %)
6 diff
(97.5 %id)
CN480465 lung, Lung Focal Fibrosis .b 1729 to 1962 1 to 234   AAA Submitted on the opposite strand 234/234
(100 %)
6 diff
(97.5 %id)
CA444321 lung, Metastatic Chondrosarcoma .b 2724 to 3043 338 to 19   AAA   320/320
(100 %)
0 diff
(100 %id)
CA444321 lung, Metastatic Chondrosarcoma .b 2724 to 3043 338 to 19   AAA   320/320
(100 %)
0 diff
(100 %id)
BU625226 cell lines, Enchondroma .b 2736 to 3043 326 to 19   AAA   308/308
(100 %)
0 diff
(100 %id)
BU625226 cell lines, Enchondroma .b 2736 to 3043 326 to 19   AAA   308/308
(100 %)
0 diff
(100 %id)
BU625285 cell lines, Enchondroma .b 1459 to 1962 522 to 19   AAA   504/504
(100 %)
1 diff
(99.9 %id)
BU625285 cell lines, Enchondroma .b 1459 to 1962 522 to 19   AAA   504/504
(100 %)
1 diff
(99.9 %id)
BU625550 cell lines, Enchondroma .b 1209 to 1962 771 to 19   AAA   753/753
(100 %)
2 diff
(99.8 %id)
BU625550 cell lines, Enchondroma .b 1209 to 1962 771 to 19   AAA   753/753
(100 %)
2 diff
(99.8 %id)
TI_151773916.
matches multiple genes
  .b 2058 to 2602 102 to 649     also hits gene METAP1 548/890
(61 %)
10 diff
(98.9 %id)
TI_151772913   .b 2065 to 2710 79 to 728       650/1320
(49 %)
10 diff
(99.3 %id)
BP380468   .i 50 to 799 1 to 748 I40T I61T tiling clone,   748/750
(99 %)
23 diff
(97.0 %id)
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C