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Gene SLC33A1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
452 supporting clones for gene SLC33A1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001190992.1   .a 1 to 2449 1 to 2449 exact RefSeq,   2449/2449
(100 %)
0 diff
(100 %id)
BM193859 leukopheresis .a 4 to 274 1 to 267   tiling clone,   267/281
(95 %)
12 diff
(95.8 %id)
DB481949 hippocampus .a 19 to 447 1 to 429       429/429
(100 %)
2 diff
(99.6 %id)
DB488563 hypothalamus .a 23 to 486 1 to 462       462/462
(100 %)
2 diff
(99.6 %id)
BP357586 mammary gland .a 23 to 603 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA114243 cerebellum .a 24 to 563 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA242177 brain .a 24 to 609 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA321474 hippocampus .a 24 to 561 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
DA450907 tongue, tumor tissue .a 24 to 598 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA453097 tongue, tumor tissue .a 24 to 576 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA460143 tongue, tumor tissue .a 24 to 586 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA461003 tongue, tumor tissue .a 24 to 586 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB216038 trachea .a 24 to 572 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB091671 testis .a 27 to 584 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BP235438 coronary artery .a 28 to 608 1 to 581       581/581
(100 %)
11 diff
(98.2 %id)
DB080139 testis .a 28 to 545 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA012918 adrenal gland .a 30 to 596 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA170992 amygdala .a 30 to 547 2 to 519   capped   518/518
(100 %)
1 diff
(99.9 %id)
DA201277 brain .a 30 to 608 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA445338 tongue, tumor tissue .a 30 to 605 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA953017 Spleen .a 30 to 600 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB045973 testis .a 30 to 594 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB207125 trachea .a 30 to 595 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB211796 trachea .a 30 to 568 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DB218278 trachea .a 30 to 264 2 to 236   capped   235/235
(100 %)
2 diff
(99.2 %id)
DB220899 trachea .a 30 to 600 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB239934 trachea .a 30 to 599 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
AK312268   .a 31 to 2112 1 to 2082 exact     2082/2082
(100 %)
1 diff
(100.0 %id)
AU098947   .a 31 to 329 1 to 300       300/300
(100 %)
2 diff
(99.4 %id)
AU103920   .a 31 to 80 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BP239846 Liver .a 31 to 646 1 to 617       617/617
(100 %)
2 diff
(99.7 %id)
BM924974 pooled lung and spleen .a 31 to 1065 1 to 1042       1042/1044
(99 %)
31 diff
(97.1 %id)
BP278434   .a 31 to 613 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA024220   .a 32 to 596 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA034248   .a 32 to 560 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DA040660 bladder .a 32 to 582 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA043883 bladder .a 32 to 583 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA131620 alzheimer cortex .a 32 to 669 2 to 639   capped   638/638
(100 %)
2 diff
(99.7 %id)
DA131625 alzheimer cortex .a 32 to 669 2 to 639   capped   638/638
(100 %)
2 diff
(99.7 %id)
DA185799 amygdala .a 32 to 573 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA212861 brain .a 32 to 545 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
DA218338 brain .a 32 to 579 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA388628 thalamus .a 32 to 588 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA399307 thalamus .a 32 to 596 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA652933   .a 32 to 571 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA657305   .a 32 to 601 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA658579   .a 32 to 589 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA706204   .a 32 to 618 2 to 589   capped   588/589
(99 %)
5 diff
(99.2 %id)
DA806441 brain .a 32 to 587 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA949428 Spleen .a 32 to 593 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
BE246400 leukopheresis .a 32 to 340 1 to 309       309/309
(100 %)
11 diff
(96.5 %id)
DB039958 testis .a 32 to 610 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DB110101 thymus .a 32 to 613 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DB133566 thymus .a 32 to 591 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB136883 thymus .a 32 to 570 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DB143413 thymus .a 32 to 570 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DB150190 thymus .a 32 to 608 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB159157 thymus .a 32 to 588 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB227580 trachea .a 32 to 591 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB230632 trachea .a 32 to 618 2 to 588   capped   587/588
(99 %)
4 diff
(99.4 %id)
DB233702 trachea .a 32 to 588 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB238656 trachea .a 32 to 636 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
DB238754 trachea .a 32 to 604 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DB239555 trachea .a 32 to 618 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DB240663 trachea .a 32 to 634 2 to 604   capped   603/603
(100 %)
0 diff
(100 %id)
DB240889 trachea .a 32 to 622 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DB266581 uterus .a 32 to 608 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB281056 uterus .a 32 to 586 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
BP233134 muscle .a 33 to 615 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BM752189 Ascites, stomach .a 33 to 458 1 to 426       426/426
(100 %)
1 diff
(99.8 %id)
BP357669 mammary gland .a 33 to 613 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BP358898 mammary gland .a 33 to 612 1 to 582       582/582
(100 %)
10 diff
(98.3 %id)
DA034432   .a 34 to 510 2 to 478   capped   477/477
(100 %)
1 diff
(99.8 %id)
DA184384 amygdala .a 34 to 598 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA232642 brain .a 34 to 604 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA253492 caudate nucleus .a 34 to 601 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA333520 hippocampus .a 34 to 611 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA333969 hippocampus .a 34 to 627 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA340585 hippocampus .a 34 to 621 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DA352240 substantia nigra .a 34 to 600 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA380772 thalamus .a 34 to 602 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA380827 thalamus .a 34 to 572 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA396958 thalamus .a 34 to 626 2 to 594   capped   593/593
(100 %)
2 diff
(99.7 %id)
DA447103 tongue, tumor tissue .a 34 to 614 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA455773 tongue, tumor tissue .a 34 to 582 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA455786 tongue, tumor tissue .a 34 to 603 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA456917 tongue, tumor tissue .a 34 to 585 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
DA471356   .a 34 to 563 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
DA473389   .a 34 to 584 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA476625   .a 34 to 602 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA619520   .a 34 to 586 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA658508   .a 34 to 563 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DA724028   .a 34 to 584 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA859720 placenta .a 34 to 600 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DB064220 testis .a 34 to 575 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB130932 thymus .a 34 to 521 2 to 489   capped   488/488
(100 %)
1 diff
(99.8 %id)
DB133055 thymus .a 34 to 583 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB199504 trachea .a 34 to 596 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DB213511 trachea .a 34 to 578 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DB215220 trachea .a 34 to 583 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DB217303 trachea .a 34 to 545 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
DB221788 trachea .a 34 to 563 2 to 532   capped   531/531
(100 %)
3 diff
(99.5 %id)
DB225733 trachea .a 34 to 601 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB228794 trachea .a 34 to 613 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DB232786 trachea .a 34 to 584 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB239201 trachea .a 34 to 623 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DB240845 trachea .a 34 to 563 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
CR622424 fetal liver .a 36 to 2401 1 to 2366 exact tiling clone,   2366/2366
(100 %)
0 diff
(100 %id)
AL532294 brain, fetal liver, Liver, neuroblastoma cells .a 36 to 1169 1 to 1120       1120/1131
(99 %)
23 diff
(98.0 %id)
DA944906 Spleen .a 36 to 586 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA409491 thalamus .a 39 to 583 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
CN410106 embryonic stem cells, DMSO-treated H9 cellline .a 47 to 470 1 to 424       424/424
(100 %)
2 diff
(99.6 %id)
BP280899   .a 47 to 629 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DB223889 trachea .a 47 to 600 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB282317 uterus .a 47 to 589 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
AI878900 brain, frontal lobe .a 48 to 564 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
BI823976 pooled brain, lung, testis .a 48 to 841 1 to 791       791/792
(99 %)
23 diff
(97.1 %id)
DA456692 tongue, tumor tissue .a 51 to 563 2 to 514   capped   513/513
(100 %)
3 diff
(99.5 %id)
AU118593 whole embryo, mainly head .a 53 to 862 2 to 813   capped   812/812
(100 %)
8 diff
(99.1 %id)
BG323480 Kidney, renal cell adenocarcinoma .a 53 to 871 1 to 814       814/816
(99 %)
20 diff
(97.6 %id)
BC014416 Kidney, renal cell adenocarcinoma .a 54 to 2432 1 to 2379 exact tiling clone, available from MGC, AAA   2379/2379
(100 %)
0 diff
(100 %id)
DA292448 hippocampus .a 54 to 637 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DB446930 testis .a 54 to 496 1 to 443       443/443
(100 %)
1 diff
(99.8 %id)
AU103922   .a 54 to 104 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
DA102805 cerebellum .a 55 to 602 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA316885 hippocampus .a 55 to 597 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA378733 thalamus .a 55 to 613 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA385157 thalamus .a 55 to 631 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA394938 thalamus .a 55 to 634 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA434530 tongue, tumor tissue .a 55 to 588 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
DA658966   .a 55 to 612 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB060331 testis .a 55 to 593 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DB226577 trachea .a 55 to 632 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DB230565 trachea .a 55 to 647 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
DB285427 uterus .a 56 to 599 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA651509   .a 58 to 596 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA652169   .a 58 to 425 2 to 373   capped   372/372
(100 %)
6 diff
(98.4 %id)
CF593427 Human Placenta, placenta .a 59 to 813 23 to 780       758/782
(96 %)
15 diff
(98.1 %id)
DB220374 trachea .a 59 to 606 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BP239283 Liver .a 60 to 609 1 to 550       550/550
(100 %)
8 diff
(98.6 %id)
DB079396 testis .a 60 to 563 2 to 505   capped   504/504
(100 %)
3 diff
(99.5 %id)
DA249035 brain .a 61 to 637 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BQ049095 lymph, lymphoma, cell line .a 61 to 911 12 to 871       860/1033
(83 %)
19 diff
(98.2 %id)
DB154413 thymus .a 61 to 650 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
TI_57241305   .a 65 to 967 29 to 925       897/925
(96 %)
6 diff
(99.4 %id)
DB252639 uterus .a 65 to 563 2 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
BI913685 brain .a 66 to 967 1 to 896       896/896
(100 %)
19 diff
(97.9 %id)
DA220136 brain .a 67 to 626 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA937084 Spleen .a 67 to 663 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA970607 synovial membrane tissue from rheumatioidarthritis .a 67 to 617 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CN410105 embryonic stem cells, cell lines H1, H7, andH9 .a 73 to 769 1 to 698       698/698
(100 %)
4 diff
(99.5 %id)
AU103921   .a 75 to 124 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
BP244019 Liver .a 75 to 645 1 to 571       571/571
(100 %)
21 diff
(96.4 %id)
CF272235 Brain glioblastoma .a 75 to 922 1 to 848       848/956
(88 %)
33 diff
(96.6 %id)
BP270247 small intestine .a 75 to 658 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
BP358316 mammary gland .a 75 to 651 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
AL526700 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 76 to 979 1 to 900       900/907
(99 %)
13 diff
(98.6 %id)
DA562575 heart .a 76 to 637 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA660867   .a 76 to 652 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA717406   .a 76 to 626 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA759161   .a 76 to 539 2 to 465   capped   464/464
(100 %)
1 diff
(99.8 %id)
DB097122 testis .a 76 to 661 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DB133432 thymus .a 76 to 625 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB235010 trachea .a 76 to 651 2 to 578   capped   577/579
(99 %)
4 diff
(99.4 %id)
DB241090 trachea .a 76 to 669 2 to 595   capped   594/595
(99 %)
2 diff
(99.7 %id)
DB260177 uterus .a 76 to 641 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BP351240   .a 77 to 657 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA472085   .a 78 to 811 2 to 735   capped   734/734
(100 %)
6 diff
(99.2 %id)
DA653525   .a 78 to 620 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
BP321310 placenta .a 78 to 660 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DB146131 thymus .a 79 to 561 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
DB162217 thymus .a 79 to 661 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DB465313 hippocampus .a 81 to 515 1 to 435       435/435
(100 %)
2 diff
(99.6 %id)
DB481939 hippocampus .a 81 to 503 1 to 423       423/423
(100 %)
2 diff
(99.6 %id)
CX759623 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 83 to 793 1 to 709     Submitted on the opposite strand 709/839
(84 %)
3 diff
(99.7 %id)
CA488169   .a 84 to 536 1 to 461       461/848
(54 %)
14 diff
(98.4 %id)
CR984082 T-Lymphocytes .a 90 to 842 1 to 757       757/757
(100 %)
5 diff
(99.4 %id)
CN410107 embryonic stem cells, cell lines H1, H7, andH9 .a 91 to 740 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
AL042111 testis .a 91 to 525 1 to 434       434/434
(100 %)
11 diff
(97.5 %id)
AA333841   .a 107 to 373 1 to 267       267/275
(97 %)
6 diff
(97.9 %id)
DN996438 breast cancer, Mammary gland (cancer tissue) .a 107 to 679 1 to 574       574/576
(99 %)
7 diff
(98.8 %id)
AW965390   .a 108 to 720 1 to 620       620/626
(99 %)
23 diff
(96.4 %id)
W49603 senescent fibroblast .a 110 to 502 1 to 391       391/391
(100 %)
4 diff
(99.0 %id)
BU188773 melanotic melanoma, skin .a 184 to 1016 12 to 847       836/848
(98 %)
10 diff
(98.9 %id)
BI598813 brain, hypothalamus .a 302 to 1003 1 to 705       705/705
(100 %)
7 diff
(99.1 %id)
BI598304 brain, hypothalamus .a 302 to 1044 1 to 744       744/744
(100 %)
11 diff
(98.6 %id)
TI_45211032   .a 305 to 1044 83 to 823       741/823
(90 %)
6 diff
(99.3 %id)
TI_45211130   .a 305 to 1003 88 to 789       702/789
(88 %)
6 diff
(99.3 %id)
DB492634 hypothalamus .a 311 to 731 1 to 427       427/427
(100 %)
16 diff
(96.3 %id)
BQ301222 bocio_tumor .a 377 to 625 1 to 252       252/252
(100 %)
8 diff
(96.9 %id)
CK819252 Islets of Langerhans, Pancreas .a 423 to 1000 1 to 578       578/578
(100 %)
2 diff
(99.7 %id)
BM128266 Islets of Langerhans, Pancreas .a 439 to 1023 1 to 585       585/585
(100 %)
0 diff
(100 %id)
TI_1948137098   .a 459 to 1236 127 to 906       780/1358
(57 %)
25 diff
(98.2 %id)
TI_1948137099   .a 459 to 1158 127 to 828       702/1348
(52 %)
14 diff
(99.0 %id)
TI_1948137436   .a 459 to 1064 130 to 735       606/1459
(41 %)
4 diff
(99.8 %id)
TI_1948137437   .a 459 to 1281 127 to 958       830/1351
(61 %)
12 diff
(99.2 %id)
TI_1948137782   .a 459 to 1237 132 to 921       790/1414
(55 %)
32 diff
(97.8 %id)
TI_1948138131   .a 459 to 1232 121 to 894       774/1380
(56 %)
29 diff
(97.9 %id)
TI_1948138132   .a 459 to 1094 123 to 763       641/1389
(46 %)
14 diff
(99.0 %id)
CV028660 mixed .a 463 to 1108 1 to 646       646/649
(99 %)
1 diff
(99.9 %id)
CA773877 Pancreas, Purified pancreatic islet .a 465 to 687 1 to 223       223/223
(100 %)
7 diff
(96.9 %id)
BE468171 carcinoid, lung .a 466 to 1002 1 to 537     Submitted on the opposite strand 537/537
(100 %)
7 diff
(98.7 %id)
TI_1948137783   .a 467 to 1089 130 to 762       633/1440
(43 %)
44 diff
(97.0 %id)
AJ706697 heart .a 537 to 1015 479 to 3     Submitted on the opposite strand 477/484
(98 %)
0 diff
(100 %id)
AJ707512 heart .a 537 to 1023 488 to 1     Submitted on the opposite strand 488/493
(98 %)
1 diff
(99.8 %id)
AL042742 testis .a 600 to 1356 1 to 759       759/761
(99 %)
7 diff
(99.1 %id)
BQ960683 sciatic nerve .a 662 to 1523 11 to 881       871/883
(98 %)
23 diff
(97.4 %id)
BX433403 fetal liver, Liver .a 721 to 1596 880 to 1       880/880
(100 %)
4 diff
(99.6 %id)
AI243640 pooled .a 724 to 1019 294 to 1       294/294
(100 %)
12 diff
(96.0 %id)
AA814587 germinal center B cell .a 799 to 1302 506 to 4       503/506
(99 %)
2 diff
(99.7 %id)
BF240648 bone marrow, from acute myelogenous leukemia .a 827 to 1502 1 to 665       665/810
(82 %)
27 diff
(96.7 %id)
DB021160 testis .a 829 to 1377 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
BX452475 fetal liver, Liver .a 890 to 1700 10 to 816       807/973
(82 %)
23 diff
(97.7 %id)
AU279889   .a 930 to 1489 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BM551586 melanotic melanoma, skin .a 931 to 1540 1 to 622       622/1419
(43 %)
46 diff
(96.8 %id)
BM714766 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1021 to 1554 1 to 534       534/534
(100 %)
0 diff
(100 %id)
AI276719 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1033 to 1295 263 to 1       263/263
(100 %)
0 diff
(100 %id)
AA703187 liver and spleen .a 1042 to 1322 282 to 1       282/282
(100 %)
5 diff
(98.3 %id)
AI032088 liver and spleen .a 1042 to 1322 282 to 1       282/282
(100 %)
6 diff
(97.9 %id)
DB145098 thymus .a 1045 to 1602 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
BG167052 hypernephroma, cell line, Kidney .a 1093 to 1696 1 to 604       604/872
(69 %)
8 diff
(99.1 %id)
BF813572 colon_ins .a 1242 to 1566 8 to 330       323/339
(95 %)
27 diff
(92.1 %id)
BG287668 bladder, transitional cell papilloma, cell line .a 1291 to 2052 1 to 767       767/861
(89 %)
29 diff
(96.7 %id)
TI_1948137785   .a 1299 to 2111 953 to 144       810/1344
(60 %)
20 diff
(98.6 %id)
DA718813   .a 1353 to 1912 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
TI_1948138134   .a 1353 to 2111 905 to 145       761/1429
(53 %)
15 diff
(99.0 %id)
TI_1948137438   .a 1424 to 2111 812 to 120       693/1071
(64 %)
11 diff
(99.0 %id)
AL532293 brain, fetal liver, Liver, neuroblastoma cells .a 1429 to 2401 970 to 1       970/975
(99 %)
7 diff
(99.3 %id)
AL562731 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1449 to 2422 974 to 1       974/974
(100 %)
8 diff
(99.2 %id)
BG989984 head_neck .a 1454 to 1943 525 to 37       489/525
(93 %)
7 diff
(98.7 %id)
DR422675 eye, Pterygium .a 1455 to 2050 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
BE005262 breast_normal .a 1459 to 1781 331 to 10     Submitted on the opposite strand 322/331
(97 %)
1 diff
(99.7 %id)
BQ311117 breast_normal .a 1459 to 1781 352 to 16       337/354
(95 %)
19 diff
(94.7 %id)
TI_1948137784   .a 1466 to 2111 796 to 139       659/1055
(62 %)
54 diff
(94.9 %id)
TI_1948138133   .a 1467 to 2111 796 to 147       650/1111
(58 %)
23 diff
(98.0 %id)
TI_1948137100   .a 1476 to 2111 873 to 219       655/1258
(52 %)
23 diff
(98.2 %id)
FN072659 breast carcinoma .a 1491 to 1576 86 to 2     Submitted on the opposite strand 85/90
(94 %)
0 diff
(100 %id)
TI_1948137101   .a 1544 to 2111 694 to 124       569/932
(61 %)
13 diff
(98.7 %id)
BP290546 lung .a 1626 to 2046 1 to 421       421/547
(76 %)
3 diff
(99.5 %id)
AI970270 pooled germ cell tumors .a 1630 to 1918 289 to 1       289/289
(100 %)
10 diff
(96.6 %id)
BF367589 placenta_normal .a 1778 to 2208 1 to 430       430/432
(99 %)
3 diff
(99.4 %id)
AL044679 testis .a 1795 to 2001 1 to 207       207/207
(100 %)
0 diff
(100 %id)
AA360820   .a 1830 to 2117 1 to 289       289/289
(100 %)
1 diff
(99.7 %id)
AA847135 germinal center B cell .a 1954 to 2432 502 to 22   AAA   481/481
(100 %)
25 diff
(94.9 %id)
AI652697 pooled germ cell tumors .a 2036 to 2422 397 to 11       387/397
(97 %)
0 diff
(100 %id)
AI962716 pooled germ cell tumors .a 2036 to 2107 72 to 1       72/72
(100 %)
3 diff
(95.9 %id)
BF062222 pooled germ cell tumors .a 2036 to 2432 397 to 1       397/397
(100 %)
0 diff
(100 %id)
H71434 liver and spleen .a 2133 to 2439 309 to 3     Submitted on the opposite strand 307/309
(99 %)
0 diff
(100 %id)
AI824610 Prostate .a 2148 to 2440 294 to 5       290/294
(98 %)
0 diff
(100 %id)
BE466499 Kidney .a 2182 to 2440 266 to 8       259/266
(97 %)
0 diff
(100 %id)
R83711 liver and spleen .a 2193 to 2433 241 to 1     Submitted on the opposite strand 241/246
(97 %)
2 diff
(99.2 %id)
DB350580.
matches multiple genes
trachea .a 2206 to 2443 238 to 1     also hits gene kinu 238/238
(100 %)
0 diff
(100 %id)
EC457521 Prostate .a 2232 to 2319 14 to 101       88/101
(87 %)
11 diff
(89.2 %id)
AA886536 metastatic prostate bone lesion .a 2264 to 2448 185 to 1       185/189
(97 %)
4 diff
(97.9 %id)
CB105974 Liver .a 2292 to 2434 1 to 143       143/146
(97 %)
1 diff
(99.4 %id)
BG772430 testis .b 1 to 768 1 to 769   tiling clone,   769/769
(100 %)
15 diff
(98.1 %id)
CB959684 Human Placenta, placenta .b 61 to 706 28 to 679       652/800
(81 %)
11 diff
(98.7 %id)
BI669501 brain, hypothalamus .b 137 to 529 1 to 395       395/577
(68 %)
7 diff
(98.8 %id)
BI668038 brain, hypothalamus .b 137 to 709 1 to 571       571/571
(100 %)
11 diff
(98.1 %id)
NM_004733.3   .b 139 to 3949 1 to 3811 exact RefSeq,   3811/3811
(100 %)
0 diff
(100 %id)
DA458307 tongue, tumor tissue .b 140 to 696 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB078853 testis .b 140 to 705 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB134458 thymus .b 140 to 709 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DB286963 uterus .b 140 to 702 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
BM148982 leukopheresis .b 141 to 639 1 to 499       499/499
(100 %)
5 diff
(99.0 %id)
BM148239 leukopheresis .b 141 to 626 1 to 486       486/486
(100 %)
5 diff
(99.0 %id)
TI_44345038   .b 142 to 529 89 to 478       390/660
(59 %)
4 diff
(99.4 %id)
TI_44346447   .b 142 to 709 89 to 654       566/654
(86 %)
6 diff
(99.1 %id)
BP232197 muscle .b 147 to 729 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CB044067 colon, juvenile granulosa tumor .b 172 to 824 12 to 663     Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 652/663
(98 %)
6 diff
(99.1 %id)
DA396682 thalamus .b 174 to 756 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DA546561   .b 174 to 757 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
BQ889229 dorsal root ganglia .b 174 to 909 1 to 743       743/878
(84 %)
14 diff
(98.5 %id)
BQ897784 dorsal root ganglia .b 174 to 980 1 to 813   tiling clone,   813/950
(85 %)
9 diff
(99.1 %id)
DB258485 uterus .b 174 to 739 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA645497   .b 175 to 745 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
TI_57201231   .b 177 to 979 20 to 819   tiling clone,   800/820
(97 %)
26 diff
(96.9 %id)
DA876714 Prostate .b 177 to 753 2 to 578   capped   577/578
(99 %)
2 diff
(99.7 %id)
DB264882 uterus .b 177 to 765 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
BF840570 head_neck .b 178 to 525 10 to 361       352/415
(84 %)
29 diff
(93.1 %id)
DA715218   .b 178 to 683 2 to 509   capped   508/508
(100 %)
3 diff
(99.5 %id)
DB132018 thymus .b 178 to 736 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB160074 thymus .b 178 to 748 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA437391 tongue, tumor tissue .b 181 to 799 2 to 622   capped   621/621
(100 %)
2 diff
(99.7 %id)
DA043464 bladder .b 184 to 726 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA229411 brain .b 184 to 735 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA320995 hippocampus .b 184 to 733 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
BJ995004 hepatoblastoma .b 184 to 783 1 to 600       600/600
(100 %)
2 diff
(99.7 %id)
DB229995 trachea .b 185 to 762 2 to 579   tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
DB236865 trachea .b 185 to 738 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CD671864 eye, Iris .b 1154 to 1726 1 to 573   tiling clone, Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 573/573
(100 %)
1 diff
(99.9 %id)
AU117408 whole embryo, mainly head .b 1164 to 1990 2 to 825   tiling clone, capped   824/824
(100 %)
5 diff
(99.4 %id)
BF701802 brain, primitive neuroectoderm .b 1748 to 2399 1 to 643       643/895
(71 %)
12 diff
(98.7 %id)
BG741231 skin .b 1899 to 2757 1 to 859   tiling clone,   859/864
(99 %)
26 diff
(97.0 %id)
AW992916 breast_normal .b 2033 to 2614 1 to 589       589/589
(100 %)
28 diff
(95.3 %id)
CD104691 Pooled-Skin .b 2046 to 2725 1 to 676       676/758
(89 %)
7 diff
(99.1 %id)
AA094587   .b 2080 to 2357 1 to 274       274/274
(100 %)
8 diff
(97.1 %id)
AW629817 2 pooled high-grade transitional celltumors, genitourinary tract .b 2090 to 2528 10 to 448       439/448
(97 %)
6 diff
(98.7 %id)
AI983862 adenocarcinoma, Pancreas .b 2092 to 2883 793 to 1       793/793
(100 %)
19 diff
(97.7 %id)
N46018 melanocyte .b 2173 to 2590 1 to 420       420/424
(99 %)
6 diff
(98.6 %id)
FN155440 breast carcinoma .b 2215 to 2319 1 to 107       107/107
(100 %)
2 diff
(98.2 %id)
CK429609 eye, lacrimal gland .b 2264 to 2873 1 to 610       610/610
(100 %)
5 diff
(99.2 %id)
BP337851 coronary artery .b 2272 to 2857 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
CD242649 brain, Pituitary .b 2286 to 2982 1 to 704       704/966
(72 %)
12 diff
(98.8 %id)
AW992907 breast_normal .b 2291 to 2927 662 to 25     Submitted on the opposite strand 638/662
(96 %)
0 diff
(100 %id)
CB163202 Liver .b 2312 to 2899 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
BP218510 caudate nucleus .b 2319 to 2891 1 to 574       574/574
(100 %)
16 diff
(97.3 %id)
BE813399 breast_normal .b 2320 to 2642 11 to 335       325/335
(97 %)
6 diff
(98.3 %id)
AW993454 breast_normal .b 2324 to 2910 651 to 65     Submitted on the opposite strand 587/651
(90 %)
0 diff
(100 %id)
AU144245 whole embryo, mainly head .b 2328 to 2889 578 to 1       578/578
(100 %)
27 diff
(95.4 %id)
AW298664   .b 2328 to 2826 507 to 9       499/507
(98 %)
0 diff
(100 %id)
CA314020 Human Lung Epithelial cells, lung .b 2415 to 3128 1 to 714   AAA Submitted on the opposite strand 714/714
(100 %)
2 diff
(99.8 %id)
AI753181 bone marrow stroma .b 2420 to 2883 482 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 464/464
(100 %)
0 diff
(100 %id)
R60186 whole brain .b 2441 to 2928 1 to 492       492/497
(98 %)
10 diff
(98.0 %id)
H20240 brain .b 2450 to 2833 1 to 388   fully sequenced,   388/388
(100 %)
4 diff
(99.0 %id)
BX110971 brain .b 2451 to 3119 1 to 669   AAA   669/678
(98 %)
1 diff
(99.9 %id)
AI074625 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2469 to 2899 431 to 1       431/431
(100 %)
0 diff
(100 %id)
BQ373118 prostate_tumor .b 2480 to 2851 372 to 1       372/372
(100 %)
2 diff
(99.5 %id)
AI784090 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2482 to 2889 408 to 1       408/408
(100 %)
0 diff
(100 %id)
H11285 whole brain .b 2489 to 2801 1 to 318     Submitted on the opposite strand 318/414
(76 %)
6 diff
(98.6 %id)
CB044066 colon, juvenile granulosa tumor .b 2489 to 3128 656 to 17   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 640/640
(100 %)
0 diff
(100 %id)
H49783 brain .b 2499 to 2914 1 to 423       423/467
(90 %)
18 diff
(96.2 %id)
BF340888 brain, glioblastoma with EGFR amplification .b 2512 to 3152 28 to 660       633/810
(78 %)
6 diff
(99.3 %id)
AI636112 Kidney .b 2516 to 3126 613 to 3       611/613
(99 %)
0 diff
(100 %id)
BJ995005 hepatoblastoma .b 2526 to 2878 353 to 1       353/353
(100 %)
1 diff
(99.8 %id)
BG697232 skin .b 2526 to 3318 1 to 788       788/788
(100 %)
6 diff
(99.3 %id)
BE348479 carcinoid, lung .b 2531 to 2890 360 to 1       360/360
(100 %)
3 diff
(99.2 %id)
AV742990 cord Blood .b 2540 to 2891 13 to 357   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 345/359
(96 %)
7 diff
(98.1 %id)
AV753115 Pituitary .b 2540 to 3123 6 to 585   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 580/589
(98 %)
6 diff
(99.0 %id)
TI_157606805   .b 2571 to 3128 662 to 105   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 558/558
(100 %)
1 diff
(99.9 %id)
CD671863 eye, Iris .b 2572 to 3128 574 to 18   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 557/557
(100 %)
0 diff
(100 %id)
AA295037 Pancreas .b 2598 to 2874 1 to 277       277/277
(100 %)
0 diff
(100 %id)
AI141376 parathyroid gland, parathyroid tumor .b 2600 to 2887 287 to 5       283/287
(98 %)
0 diff
(100 %id)
BP337455 coronary artery .b 2612 to 3192 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DB550792 hippocampus .b 2631 to 3128 1 to 498     Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
DB550804 hippocampus .b 2635 to 3126 1 to 492     Submitted on the opposite strand 492/494
(99 %)
1 diff
(99.8 %id)
N35274 melanocyte .b 2642 to 2988 1 to 347       347/348
(99 %)
2 diff
(99.5 %id)
D59688   .b 2666 to 3017 1 to 346       346/346
(100 %)
9 diff
(97.4 %id)
D80301 brain .b 2666 to 2878 1 to 213       213/213
(100 %)
0 diff
(100 %id)
D59790   .b 2666 to 3128 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
D59817   .b 2666 to 3017 1 to 350       350/351
(99 %)
6 diff
(98.3 %id)
DB563705 hypothalamus .b 2668 to 3128 1 to 462     Submitted on the opposite strand 462/463
(99 %)
9 diff
(98.1 %id)
AW197288 pooled germ cell tumors .b 2673 to 3128 459 to 1       459/469
(97 %)
5 diff
(99.0 %id)
BE873707 large cell carcinoma, undifferentiated, lung .b 2673 to 3397 1 to 707       707/878
(80 %)
31 diff
(96.5 %id)
AI953999 normal epithelium, ovary .b 2676 to 3128 453 to 1       453/453
(100 %)
0 diff
(100 %id)
DB512081 testis .b 2691 to 3128 1 to 439     Submitted on the opposite strand 439/439
(100 %)
8 diff
(98.2 %id)
AI376721   .b 2694 to 3130 443 to 6       438/443
(98 %)
0 diff
(100 %id)
DB521226 testis .b 2696 to 3131 1 to 436     Submitted on the opposite strand 436/439
(99 %)
11 diff
(97.5 %id)
DB531882 hippocampus .b 2699 to 3128 1 to 430     Submitted on the opposite strand 430/430
(100 %)
0 diff
(100 %id)
BU564306 mixed (pool of 40 RNAs) .b 2712 to 3128 1 to 417   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 417/417
(100 %)
7 diff
(98.4 %id)
AA873261 Kidney .b 2716 to 3128 426 to 1       426/426
(100 %)
21 diff
(95.1 %id)
AW007454 anaplastic oligodendroglioma, brain .b 2718 to 3077 1 to 360     Submitted on the opposite strand 360/360
(100 %)
3 diff
(99.2 %id)
BE246363 leukopheresis .b 2750 to 3126 379 to 3       377/379
(99 %)
0 diff
(100 %id)
BF196176 carcinoid, lung .b 2754 to 2890 141 to 5       137/141
(97 %)
0 diff
(100 %id)
CA435620 lung, Metastatic Chondrosarcoma .b 2770 to 3128 377 to 19   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 359/359
(100 %)
1 diff
(99.8 %id)
AA883632 pooled .b 2791 to 3130 341 to 2       340/341
(99 %)
0 diff
(100 %id)
H41189 brain .b 2798 to 3107 312 to 1       312/321
(97 %)
2 diff
(99.4 %id)
H20145 brain .b 2803 to 3128 332 to 1   fully sequenced,   332/332
(100 %)
2 diff
(99.4 %id)
AI097559 brain, glioblastoma (pooled) .b 2812 to 3128 351 to 35   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 317/317
(100 %)
1 diff
(99.7 %id)
AI418185 brain, glioblastoma (pooled) .b 2816 to 3128 335 to 23   AAA Possibly primed on the genome, locally A rich (22/22 A in genome downstream of last aligned base) 313/313
(100 %)
2 diff
(99.4 %id)
AA853028 Bone, Hip .b 2817 to 3102 303 to 18       286/303
(94 %)
0 diff
(100 %id)
AI275180 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 2832 to 3129 298 to 1       298/298
(100 %)
0 diff
(100 %id)
W63764 parathyroid gland, parathyroid tumor .b 2833 to 3355 1 to 519       519/525
(98 %)
10 diff
(98.1 %id)
H11286 whole brain .b 2855 to 3128 285 to 12   AAA Submitted on the opposite strand 274/274
(100 %)
0 diff
(100 %id)
AW006410 normal prostate, Prostate .b 2873 to 3117 256 to 12       245/256
(95 %)
0 diff
(100 %id)
AA374764 lung .b 2883 to 3249 16 to 384       369/384
(96 %)
6 diff
(98.5 %id)
AW957647   .b 2883 to 3561 15 to 692   tiling clone,   678/697
(97 %)
15 diff
(97.9 %id)
BM818272 stomach .b 2916 to 3472 1 to 557       557/557
(100 %)
0 diff
(100 %id)
H49539 brain .b 2919 to 3117 211 to 13       199/211
(94 %)
0 diff
(100 %id)
AA878711 carcinoid, lung .b 3024 to 3128 105 to 1       105/105
(100 %)
0 diff
(100 %id)
BE082638 breast .b 3060 to 3471 1 to 412       412/412
(100 %)
9 diff
(97.9 %id)
TI_149308021   .b 3139 to 3939 932 to 135   AAA   798/918
(86 %)
25 diff
(97.3 %id)
BX324306 Neuroblastoma Cot 25-normalized .b 3160 to 3896 739 to 1       739/739
(100 %)
3 diff
(99.6 %id)
BX324307 Neuroblastoma Cot 25-normalized .b 3160 to 3939 1 to 780   AAA   780/780
(100 %)
1 diff
(99.9 %id)
BX353762 Neuroblastoma Cot 25-normalized .b 3160 to 3939 1 to 780   AAA   780/780
(100 %)
5 diff
(99.4 %id)
TI_157613177   .b 3226 to 3939 807 to 94   AAA   714/715
(99 %)
5 diff
(99.4 %id)
BQ774178 Bone, Human Chondrosarcoma Cell Line .b 3229 to 3939 729 to 19   AAA   711/711
(100 %)
0 diff
(100 %id)
CA430022 Cell Line, Chondrosarcoma .b 3229 to 3932 722 to 19   AAA   704/704
(100 %)
3 diff
(99.6 %id)
BQ771965 Chondrosarcoma Grade II, Left Pelvis .b 3231 to 3939 727 to 19   AAA   709/709
(100 %)
1 diff
(99.9 %id)
BM803285 duodenal adenocarcinoma, cell line, small intestine .b 3241 to 3932 1 to 692   AAA   692/692
(100 %)
0 diff
(100 %id)
TI_149274021   .b 3300 to 3939 740 to 101   AAA   640/963
(66 %)
2 diff
(99.8 %id)
CF528049 placenta .b 3321 to 3939 636 to 18   AAA   619/619
(100 %)
2 diff
(99.7 %id)
BU675959 lung, Primary Lung Epithelial Cells .b 3322 to 3939 636 to 19   AAA   618/618
(100 %)
0 diff
(100 %id)
BP872649 embryonal kidney .b 3330 to 3839 1 to 509       509/510
(99 %)
24 diff
(95.3 %id)
BP872670 embryonal kidney .b 3330 to 3839 1 to 510       510/511
(99 %)
3 diff
(99.5 %id)
BU686908 lung, Primary Lung Epithelial Cells .b 3337 to 3939 621 to 19   AAA   603/603
(100 %)
12 diff
(98.1 %id)
H72050 liver and spleen .b 3338 to 3642 1 to 306     Submitted on the opposite strand 306/306
(100 %)
2 diff
(99.4 %id)
BQ003351 Chondrosarcoma, Left Pelvis .b 3338 to 3939 620 to 19   AAA   602/602
(100 %)
0 diff
(100 %id)
H66943 liver and spleen .b 3358 to 3727 1 to 379     Submitted on the opposite strand 379/388
(97 %)
14 diff
(96.4 %id)
H71435 liver and spleen .b 3358 to 3759 1 to 413     Submitted on the opposite strand 413/413
(100 %)
16 diff
(96.2 %id)
H71912 liver and spleen .b 3358 to 3692 1 to 344     Submitted on the opposite strand 344/345
(99 %)
18 diff
(94.8 %id)
H79288 liver and spleen .b 3383 to 3675 1 to 298     Submitted on the opposite strand 298/299
(99 %)
6 diff
(98.0 %id)
AI632236 pooled germ cell tumors .b 3383 to 3914 532 to 1       532/532
(100 %)
0 diff
(100 %id)
FN159295 breast carcinoma .b 3387 to 3493 107 to 1     Submitted on the opposite strand 107/107
(100 %)
0 diff
(100 %id)
BE464756 carcinoid, lung .b 3404 to 3940 543 to 7       537/543
(98 %)
0 diff
(100 %id)
AA401419   .b 3408 to 3899 1 to 492       492/492
(100 %)
0 diff
(100 %id)
AI806232 pooled .b 3420 to 3931 523 to 11   AAA   513/513
(100 %)
10 diff
(98.1 %id)
AI279533 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3423 to 3940 519 to 2   tiling clone,   518/519
(99 %)
0 diff
(100 %id)
BE326660 Kidney .b 3424 to 3934 515 to 5       511/515
(99 %)
0 diff
(100 %id)
BF055562 pooled .b 3424 to 3940 523 to 7       517/523
(98 %)
0 diff
(100 %id)
BE550051 carcinoid, lung .b 3433 to 3940 510 to 3       508/510
(99 %)
0 diff
(100 %id)
AI339379 pooled germ cell tumors .b 3444 to 3940 504 to 8       497/504
(98 %)
0 diff
(100 %id)
TI_154067343   .b 3452 to 3924 559 to 79       481/559
(86 %)
0 diff
(100 %id)
AI356680 brain, glioblastoma (pooled) .b 3454 to 3939 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AW662831 pooled .b 3465 to 3934 470 to 1       470/470
(100 %)
1 diff
(99.8 %id)
AW614919 2 pooled high-grade transitional celltumors, genitourinary tract .b 3472 to 3939 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AW008336 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 3475 to 3934 467 to 8       460/467
(98 %)
0 diff
(100 %id)
AW051296 pooled .b 3475 to 3943 481 to 13   AAA   469/469
(100 %)
1 diff
(99.8 %id)
AW664743 pooled .b 3475 to 3934 461 to 2       460/461
(99 %)
0 diff
(100 %id)
AW593239 pooled .b 3476 to 3934 460 to 2       459/460
(99 %)
0 diff
(100 %id)
AI096764 brain, glioblastoma (pooled) .b 3479 to 3939 473 to 13   AAA   461/461
(100 %)
3 diff
(99.4 %id)
CF124545 CNCAP(3)T-225 cell line, Prostate .b 3482 to 3914 29 to 461   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 433/461
(93 %)
5 diff
(99.0 %id)
TI_154184877   .b 3482 to 3932 98 to 546       449/552
(81 %)
6 diff
(99.0 %id)
AI419077 brain, glioblastoma (pooled) .b 3489 to 3939 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AI423753 brain, glioblastoma (pooled) .b 3494 to 3939 446 to 1       446/446
(100 %)
0 diff
(100 %id)
R60187 whole brain .b 3496 to 3932 456 to 14   AAA   443/443
(100 %)
11 diff
(97.6 %id)
AA507360 Prostate .b 3499 to 3833 1 to 335       335/335
(100 %)
1 diff
(99.8 %id)
AA507323 Prostate .b 3499 to 3790 1 to 294       294/294
(100 %)
14 diff
(95.3 %id)
AI435531 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3502 to 3933 432 to 1       432/432
(100 %)
0 diff
(100 %id)
AI276550 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3505 to 3939 435 to 1       435/435
(100 %)
0 diff
(100 %id)
AW205745   .b 3513 to 3943 448 to 18   AAA   431/441
(97 %)
3 diff
(99.4 %id)
AI806411 pooled .b 3520 to 3898 414 to 37       378/414
(91 %)
0 diff
(100 %id)
AW104726 ovary, tumor, 5 pooled (see description) .b 3523 to 3939 432 to 15   AAA   418/418
(100 %)
8 diff
(98.1 %id)
H81492 liver and spleen .b 3530 to 3915 398 to 1     Submitted on the opposite strand 398/401
(99 %)
12 diff
(97.1 %id)
BF526850 brain, glioblastoma with EGFR amplification .b 3535 to 3934 1 to 405   AAA   405/428
(94 %)
17 diff
(96.1 %id)
H72137 liver and spleen .b 3541 to 3915 380 to 1     Submitted on the opposite strand 380/392
(96 %)
5 diff
(98.8 %id)
BE222130 carcinoid, lung .b 3545 to 3938 394 to 1       394/394
(100 %)
0 diff
(100 %id)
BE328112 carcinoid, lung .b 3545 to 3938 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AA830892 germinal center B cell .b 3550 to 3932 395 to 13   AAA   383/383
(100 %)
0 diff
(100 %id)
AI081767 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 3558 to 3939 394 to 13   AAA   382/382
(100 %)
1 diff
(99.8 %id)
W03327 liver and spleen .b 3559 to 3933 377 to 1     Submitted on the opposite strand 377/386
(97 %)
1 diff
(99.8 %id)
AI917002 pooled germ cell tumors .b 3560 to 3940 384 to 4       381/384
(99 %)
0 diff
(100 %id)
H66942 liver and spleen .b 3565 to 3929 370 to 2     Submitted on the opposite strand 369/370
(99 %)
0 diff
(100 %id)
BF434766 Kidney .b 3565 to 3940 383 to 8       376/383
(98 %)
0 diff
(100 %id)
BE464321 Kidney .b 3567 to 3939 373 to 1       373/373
(100 %)
4 diff
(99.0 %id)
BF431812 pooled .b 3579 to 3944 369 to 4       366/369
(99 %)
0 diff
(100 %id)
H71911 liver and spleen .b 3581 to 3949 372 to 1   tiling clone, Submitted on the opposite strand 372/430
(86 %)
4 diff
(99.1 %id)
AW134602   .b 3582 to 3939 375 to 18   AAA   358/368
(97 %)
0 diff
(100 %id)
H79399 liver and spleen .b 3587 to 3933 349 to 1     Submitted on the opposite strand 349/349
(100 %)
2 diff
(99.5 %id)
AA829202 ovary .b 3594 to 3889 1 to 296       296/339
(87 %)
10 diff
(97.1 %id)
N32176 melanocyte .b 3618 to 3911 295 to 1       295/295
(100 %)
3 diff
(99.0 %id)
BX456487 thymus .c 1 to 1060 1 to 1050 K53X K217R K253X tiling clone,   1050/1050
(100 %)
16 diff
(98.5 %id)
BM452540 lymph, lymphoma, cell line .d-u 1 to 883 1 to 895 N239T K240N Y241I L242C R243G ... tiling clone,   895/1038
(86 %)
21 diff
(98.0 %id)
BM127941 Islets of Langerhans, Pancreas .d-u 356 to 952 598 to 2   tiling clone,   597/598
(99 %)
0 diff
(100 %id)
CK819251 Islets of Langerhans, Pancreas .d-u 380 to 803 424 to 1       424/424
(100 %)
8 diff
(98.2 %id)
CF593986 Human Placenta, placenta .e 1 to 753 29 to 788 F232I W235V F236V F237L L238F ... tiling clone,   760/806
(94 %)
15 diff
(98.2 %id)
BE788014 large cell carcinoma, lung .f 1 to 739 1 to 729 F54L A55Q I56L I57* tiling clone,   731/927
(78 %)
19 diff
(98.0 %id)
BE551202 carcinoid, lung .g 1 to 555 1 to 555 exact tiling clone, Submitted on the opposite strand 555/555
(100 %)
0 diff
(100 %id)
BE669843 carcinoid, lung .g 1 to 409 1 to 409     Submitted on the opposite strand 409/409
(100 %)
2 diff
(99.6 %id)
W24298 lung .g 29 to 209 1 to 180       180/185
(97 %)
2 diff
(99.0 %id)
BX509837   .h-u 1 to 550 1 to 550   tiling clone,   550/550
(100 %)
1 diff
(99.9 %id)
AK130481 salivary gland .h-u 360 to 2212 1 to 1849 F82C L83I Y84F F85Q S86* tiling clone, available from FLJ,   1849/1849
(100 %)
3 diff
(99.9 %id)
DW448105 Liver .h-u 1506 to 1698 17 to 209       193/209
(92 %)
7 diff
(96.7 %id)
CR741693 2 pooled tumors (clear cell type), Kidney .i 1 to 499 1 to 499 exact tiling clone,   499/499
(100 %)
0 diff
(100 %id)
BF879945 lung_tumor Gene SLC33A1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand, submitted on the opposite strand    
D88152   Gene SLC33A1, variant not shown         This clone was ignored    
AV689823 hepatocellular carcinoma Gene SLC33A1, variant not shown         Suspected internal deletion, this clone was ignored    
AI867689 pooled germ cell tumors Gene SLC33A1, variant not shown         This clone was ignored    
AI652883 pooled germ cell tumors Gene SLC33A1, variant not shown         This clone was ignored    
AI991575 pooled germ cell tumors Gene SLC33A1, variant not shown         This clone was ignored    
BF059342 pooled germ cell tumors Gene SLC33A1, variant not shown         This clone was ignored    
DB225706 trachea Gene SLC33A1, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h-u, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC