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Gene SLC25A28TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
276 supporting clones for gene SLC25A28 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR590395 Neuroblastoma Cot 50-normalized .a 1 to 1517 1 to 1517 exact tiling clone,   1517/1517
(100 %)
0 diff
(100 %id)
AL530804 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1 to 708 1 to 702   fully sequenced,   702/702
(100 %)
9 diff
(98.8 %id)
CD672723 eye, Iris .a 3 to 626 1 to 624       624/624
(100 %)
0 diff
(100 %id)
NM_031212.3   .a 3 to 1557 1 to 1555 exact RefSeq, AAA   1555/1555
(100 %)
0 diff
(100 %id)
BM544930 ovary (pool of 3) .a 4 to 631 20 to 646       627/1275
(49 %)
28 diff
(97.9 %id)
CX166730 human embryonic stem cells differentiated toan early endodermal cell type .a 11 to 680 1 to 670       670/670
(100 %)
0 diff
(100 %id)
BX353461 Neuroblastoma Cot 25-normalized .a 12 to 990 1 to 964       964/966
(99 %)
21 diff
(97.9 %id)
CV805391 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 20 to 653 1 to 637       637/729
(87 %)
62 diff
(91.5 %id)
BQ876765 sympathetic trunk .a 44 to 421 1 to 379       379/989
(38 %)
4 diff
(99.6 %id)
BX331866 Neuroblastoma Cot 25-normalized .a 50 to 1024 1 to 965       965/1009
(95 %)
27 diff
(97.4 %id)
BC047312 Brain, adult, 6 pooled whole brains .a 56 to 1550 1 to 1495   tiling clone, available from MGC, AAA   1495/1495
(100 %)
0 diff
(100 %id)
BC076399 Brain, hippocampus .a 63 to 1550 1 to 1487   available from MGC, AAA   1487/1487
(100 %)
1 diff
(100.0 %id)
BM544472 brain, hippocampus .a 63 to 651 25 to 618       594/1168
(50 %)
21 diff
(98.3 %id)
CR605062 Placenta Cot 25-normalized .a 66 to 1538 1 to 1473       1473/1473
(100 %)
0 diff
(100 %id)
BX398481 Placenta Cot 25-normalized .a 66 to 695 1 to 628   fully sequenced,   628/628
(100 %)
3 diff
(99.6 %id)
BX363434   .a 66 to 1045 1 to 976       976/976
(100 %)
15 diff
(98.5 %id)
BM546221 ovary (pool of 3) .a 81 to 511 9 to 439       431/1106
(38 %)
10 diff
(99.1 %id)
BC058937 Eye, retinoblastoma .a 94 to 1550 1 to 1457   available from MGC, AAA   1457/1457
(100 %)
0 diff
(100 %id)
AF327402   .a 103 to 1550 1 to 1448       1448/1448
(100 %)
0 diff
(100 %id)
AJ303077   .a 103 to 1550 1 to 1448       1448/1448
(100 %)
0 diff
(100 %id)
CX167404 human embryonic stem cells differentiated toan early endodermal cell type .a 150 to 653 1 to 504       504/504
(100 %)
0 diff
(100 %id)
BI757180 brain .a 242 to 710 207 to 698   available from MGC,   625/916
(68 %)
52 diff
(94.4 %id)
TI_57219960   .a 242 to 892 286 to 989       750/995
(75 %)
64 diff
(93.6 %id)
CB852545 Human Lung Epithelial cells, lung .a 275 to 986 1 to 712     Submitted on the opposite strand 712/712
(100 %)
5 diff
(99.3 %id)
DN994855 brain, whole brain .a 277 to 812 9 to 543       535/543
(98 %)
7 diff
(98.8 %id)
TI_159716783   .a 281 to 1146 49 to 908     Submitted on the opposite strand 860/1057
(81 %)
18 diff
(98.3 %id)
BQ670347 epidermoid carcinoma, cell line, salivary gland .a 289 to 802 1 to 514       514/1048
(49 %)
1 diff
(100.0 %id)
CN366026 embryonic stem cells, DMSO-treated H9 cellline .a 291 to 896 12 to 617       606/617
(98 %)
6 diff
(99.1 %id)
BC094821 Salivary gland, epidermoid carcinoma .a 320 to 1550 1 to 1231   AAA   1231/1231
(100 %)
0 diff
(100 %id)
BQ671641 epidermoid carcinoma, cell line, salivary gland .a 322 to 1262 1 to 952       952/972
(97 %)
42 diff
(95.7 %id)
BQ673420 epidermoid carcinoma, cell line, salivary gland .a 322 to 1160 1 to 845       845/911
(92 %)
13 diff
(98.6 %id)
BI045863 prostate_normal .a 357 to 834 1 to 480       480/480
(100 %)
14 diff
(97.1 %id)
CN366025 embryonic stem cells, DMSO-treated H9 cellline .a 449 to 1202 1 to 754       754/754
(100 %)
0 diff
(100 %id)
TI_227715521   .a 587 to 1550 1045 to 95   AAA   951/1020
(93 %)
22 diff
(97.9 %id)
CR601821 Placenta Cot 25-normalized .a 595 to 1553 1 to 959       959/959
(100 %)
0 diff
(100 %id)
BX382628 Placenta Cot 25-normalized .a 595 to 1553 1 to 957       957/957
(100 %)
13 diff
(98.7 %id)
BE764956 nervous_tumor .a 605 to 751 147 to 1       147/147
(100 %)
3 diff
(98.0 %id)
BG331197 large cell carcinoma, lung .a 614 to 1399 1 to 776       776/986
(78 %)
33 diff
(96.7 %id)
BX282582 cervical carcinoma cell line, cervix .a 628 to 1109 1 to 482       482/482
(100 %)
0 diff
(100 %id)
BI254253 cervical carcinoma cell line, cervix .a 628 to 1451 1 to 821       821/826
(99 %)
10 diff
(98.8 %id)
T50158 ovary .a 641 to 934 1 to 295       295/297
(99 %)
4 diff
(98.7 %id)
BX380978 Placenta Cot 25-normalized .a 665 to 1538 875 to 1   fully sequenced,   875/875
(100 %)
7 diff
(99.2 %id)
AL563845 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 678 to 1517 841 to 1   fully sequenced,   841/841
(100 %)
25 diff
(97.1 %id)
T50106 ovary .a 1075 to 1550 516 to 17   AAA   500/504
(99 %)
32 diff
(93.7 %id)
DB027959 testis .b 1 to 530 2 to 531   tiling clone, capped   530/530
(100 %)
1 diff
(99.9 %id)
BI827322 brain, medulla .b 333 to 1076 1 to 747   tiling clone,   747/747
(100 %)
5 diff
(99.4 %id)
TI_57174867   .b 333 to 1076 62 to 808       747/808
(92 %)
11 diff
(98.7 %id)
DB336758 testis .b 968 to 1537 572 to 1   tiling clone,   572/572
(100 %)
2 diff
(99.7 %id)
AL713123 human skeletal muscle .c 1 to 508 7 to 514   tiling clone,   514/514
(100 %)
6 diff
(98.9 %id)
BI755152 brain .c 161 to 1008 1 to 841       841/844
(99 %)
17 diff
(98.0 %id)
TI_57215588   .c 161 to 1008 29 to 869       841/872
(96 %)
17 diff
(98.1 %id)
CR591608 fetal liver .c 409 to 3310 1 to 2902 exact tiling clone,   2902/2902
(100 %)
0 diff
(100 %id)
BX422581 fetal liver, Liver .c 409 to 1453 1 to 1033       1033/1140
(90 %)
18 diff
(98.5 %id)
AA557738 Prostate, prostatic intraepithelial neoplasia - highgrade .c 426 to 651 7 to 232       226/267
(84 %)
3 diff
(98.9 %id)
DA529465 brain .c 442 to 1054 2 to 614   capped   613/613
(100 %)
1 diff
(99.9 %id)
DB164311 thymus .c 504 to 1081 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB209900 trachea .c 929 to 1487 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
BX431954 fetal liver, Liver .c 1188 to 2106 1 to 909       909/909
(100 %)
32 diff
(96.5 %id)
DB127334 thymus .c 1206 to 1775 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BJ997891 Wilms tumor .c 1478 to 2077 1 to 600       600/600
(100 %)
0 diff
(100 %id)
DB242626 stomach, tumor tissue .c 1618 to 2133 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
BG290483 bladder, transitional cell papilloma, cell line .c 1622 to 2330 1 to 707       707/778
(90 %)
12 diff
(98.5 %id)
BF899634 marrow .c 1661 to 2064 404 to 1     Submitted on the opposite strand 404/404
(100 %)
0 diff
(100 %id)
BX453723 fetal liver, Liver .c 1690 to 2538 851 to 1       851/945
(90 %)
44 diff
(95.4 %id)
AA401601   .c 1706 to 1993 1 to 288       288/288
(100 %)
1 diff
(99.7 %id)
BF170088 blood .c 1816 to 2138 1 to 326       326/328
(99 %)
25 diff
(92.4 %id)
CN366024 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1840 to 2460 1 to 621       621/621
(100 %)
3 diff
(99.6 %id)
AW361541 colon .c 1875 to 2381 506 to 2       505/513
(98 %)
0 diff
(100 %id)
CN366023 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1958 to 2683 13 to 738       726/738
(98 %)
6 diff
(99.2 %id)
TI_157598032   .c 1983 to 2490 555 to 50       506/1011
(50 %)
0 diff
(100 %id)
TI_157609673   .c 1983 to 2490 581 to 74       508/682
(74 %)
0 diff
(100 %id)
BE766821 nervous_tumor .c 1998 to 2538 548 to 11       538/562
(95 %)
0 diff
(100 %id)
BF849599 lung_normal .c 2053 to 2288 1 to 236       236/236
(100 %)
7 diff
(97.1 %id)
BI046645 prostate_normal .c 2054 to 2538 1 to 486       486/544
(89 %)
22 diff
(96.0 %id)
CU444203 epidermis .c 2068 to 2244 14 to 190       177/190
(93 %)
6 diff
(96.9 %id)
CU449349 epidermis .c 2068 to 2745 13 to 690       678/690
(98 %)
6 diff
(99.2 %id)
CU449909 epidermis .c 2068 to 2827 13 to 771       759/771
(98 %)
7 diff
(99.1 %id)
CU450150 epidermis .c 2068 to 2818 13 to 763       751/763
(98 %)
7 diff
(99.1 %id)
CU451291 epidermis .c 2068 to 2793 13 to 738       726/738
(98 %)
6 diff
(99.2 %id)
CU455159 epidermis .c 2068 to 2810 13 to 754       742/754
(98 %)
7 diff
(99.1 %id)
CU455197 epidermis .c 2068 to 2783 13 to 728       716/728
(98 %)
6 diff
(99.2 %id)
AA298105   .c 2132 to 2433 1 to 309       309/312
(99 %)
9 diff
(97.2 %id)
AW956325   .c 2164 to 2850 1 to 684       684/684
(100 %)
10 diff
(98.6 %id)
AA298599 lung .c 2170 to 2438 1 to 270       270/270
(100 %)
1 diff
(99.7 %id)
BQ334064 marrow .c 2216 to 2708 499 to 8       492/499
(98 %)
1 diff
(99.8 %id)
BQ334193 marrow .c 2216 to 2692 479 to 1       479/480
(99 %)
26 diff
(94.6 %id)
BM691447 eye, RPE and Choroid .c 2231 to 2763 1 to 533       533/533
(100 %)
6 diff
(98.9 %id)
BG697119 skin .c 2237 to 3135 1 to 905 N99I Q101P R102E R103T Y104V ...     905/908
(99 %)
18 diff
(98.1 %id)
AA449277   .c 2256 to 2768 1 to 509       509/512
(99 %)
6 diff
(98.9 %id)
BM728449 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2279 to 3007 1 to 728       728/728
(100 %)
2 diff
(99.8 %id)
BX422580 fetal liver, Liver .c 2309 to 3310 991 to 1 S2L W3S S4C A5P L6Y ...     991/1021
(97 %)
15 diff
(98.6 %id)
CD633031   .c 2318 to 3031 1 to 711       711/712
(99 %)
12 diff
(98.4 %id)
BE179142 head_neck .c 2340 to 2478 11 to 151       141/151
(93 %)
6 diff
(96.1 %id)
BE179149 head_neck .c 2351 to 2482 1 to 130       130/140
(92 %)
3 diff
(97.9 %id)
TI_159711485   .c 2354 to 3219 50 to 906 K195X Q202X   Submitted on the opposite strand 857/1091
(78 %)
19 diff
(98.3 %id)
CB852131 Human Lung Epithelial cells, lung .c 2356 to 3137 1 to 781 K195X Q202X   Submitted on the opposite strand 781/781
(100 %)
8 diff
(99.0 %id)
BE706405 head_neck .c 2368 to 2681 323 to 11       313/330
(94 %)
3 diff
(99.1 %id)
BE706437 head_neck .c 2377 to 2681 15 to 317       303/319
(94 %)
11 diff
(96.6 %id)
H70032 nose, olfactory epithelium .c 2395 to 2822 1 to 430       430/437
(98 %)
22 diff
(95.0 %id)
CD633035   .c 2449 to 3101 1 to 658       658/679
(96 %)
13 diff
(98.1 %id)
BI057218 placenta_normal .c 2453 to 3029 576 to 1       576/576
(100 %)
5 diff
(99.2 %id)
CD633034   .c 2468 to 3101 654 to 21       634/671
(94 %)
1 diff
(99.9 %id)
DB317619 brain .c 2814 to 3380 572 to 1       572/572
(100 %)
6 diff
(99.0 %id)
BM662505 eye, RPE and Choroid .c 2865 to 3380 533 to 18   AAA   516/516
(100 %)
0 diff
(100 %id)
AA449223   .c 2898 to 3383 489 to 4       486/489
(99 %)
0 diff
(100 %id)
AA401473   .c 2922 to 3383 462 to 1   tiling clone,   462/462
(100 %)
3 diff
(99.4 %id)
BP307356 brain .d 1 to 592 1 to 592 C83R E179G Y191D tiling clone,   592/592
(100 %)
3 diff
(99.5 %id)
BF916224 uterus_tumor .d 168 to 577 45 to 453   tiling clone,   409/453
(90 %)
6 diff
(98.7 %id)
CR977134 T-Lymphocytes .e 1 to 570 1 to 570 S188I tiling clone,   570/575
(99 %)
2 diff
(99.7 %id)
AL703504 human skeletal muscle .e 121 to 701 1 to 581   tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
DA556315   .f-u 1 to 582 2 to 583   tiling clone, to resequence, capped   582/582
(100 %)
2 diff
(99.7 %id)
DA362986 subthalamic nucleus .f-u 1239 to 1799 2 to 564   tiling clone, capped   563/563
(100 %)
4 diff
(99.3 %id)
CK430270 eye, lacrimal gland .f-u 1607 to 2228 1 to 622       622/622
(100 %)
1 diff
(99.9 %id)
DA923380 small intestine .f-u 1725 to 2288 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
BQ716623 sympathetic trunk .f-u 1758 to 2709 1 to 958   tiling clone,   958/958
(100 %)
28 diff
(97.1 %id)
BF346191 anaplastic oligodendroglioma with 1p/19qloss, brain .f-u 1837 to 2602 1 to 758       758/938
(80 %)
23 diff
(97.6 %id)
AK056782 placenta .f-u 1884 to 3470 1 to 1588 D22G available from FLJ,   1588/1588
(100 %)
6 diff
(99.7 %id)
DA837773 placenta .f-u 1885 to 2428 2 to 545   capped   544/544
(100 %)
3 diff
(99.5 %id)
AF267854 normal pituitary .f-u 2233 to 3473 1 to 1238 exact tiling clone,   1238/1244
(99 %)
6 diff
(99.6 %id)
AW375812 colon .f-u 2233 to 2917 1 to 681       681/701
(97 %)
6 diff
(99.2 %id)
R01295 liver and spleen .f-u 2312 to 2593 1 to 285       285/415
(68 %)
8 diff
(98.1 %id)
BM699449 eye, fetal eyes .f-u 2321 to 2968 1 to 648       648/648
(100 %)
0 diff
(100 %id)
AL831943 brain .f-u 2360 to 3477 1 to 1117 A35P Y37T R38A S39A Y40T ... tiling clone, available from DKFZ, AAA   1117/1117
(100 %)
1 diff
(100.0 %id)
AV748411 Pituitary .f-u 2400 to 2805 1 to 396       396/399
(99 %)
7 diff
(98.3 %id)
H30227.
matches multiple genes
brain .f-u 2435 to 2670 1 to 239     also hits gene feeplorbu 239/309
(77 %)
2 diff
(99.4 %id)
AI797101 carcinoid, lung .f-u 2530 to 3017 1 to 488     Submitted on the opposite strand 488/488
(100 %)
0 diff
(100 %id)
AI797100 carcinoid, lung .f-u 2533 to 3058 1 to 526     Submitted on the opposite strand 526/526
(100 %)
0 diff
(100 %id)
AI797090 carcinoid, lung .f-u 2533 to 3059 1 to 527     Submitted on the opposite strand 527/527
(100 %)
1 diff
(99.9 %id)
AW341177 carcinoid, lung .f-u 2533 to 3112 1 to 580     Submitted on the opposite strand 580/581
(99 %)
8 diff
(98.7 %id)
H30632 eye, retina .f-u 2543 to 2912 16 to 385       370/385
(96 %)
7 diff
(98.2 %id)
AI743110 pooled .f-u 2631 to 3473 848 to 7       842/848
(99 %)
0 diff
(100 %id)
CR601812 B cells (Ramos cell line) Cot 25-normalized .f-u 2658 to 3473 1 to 816       816/816
(100 %)
0 diff
(100 %id)
BX385126   .f-u 2658 to 3473 1 to 817       817/817
(100 %)
3 diff
(99.7 %id)
N76656 liver and spleen .f-u 2668 to 2937 1 to 270       270/270
(100 %)
5 diff
(98.2 %id)
BF847813 lung_normal .f-u 2674 to 2991 1 to 318       318/318
(100 %)
1 diff
(99.7 %id)
AA361317   .f-u 2698 to 3019 1 to 322       322/323
(99 %)
2 diff
(99.4 %id)
AA431276   .f-u 2698 to 3036 1 to 338   fully sequenced,   338/338
(100 %)
3 diff
(99.2 %id)
AA383015 testis .f-u 2699 to 2878 1 to 180       180/180
(100 %)
0 diff
(100 %id)
EL952423 eyeball .f-u 2700 to 3260 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
TI_159714879   .f-u 2710 to 3470 876 to 121   AAA   756/948
(79 %)
33 diff
(96.6 %id)
CK004135 brain/CNS, Human Brain - Cerebellar Cortex .f-u 2716 to 3391 1 to 672       672/673
(99 %)
16 diff
(97.7 %id)
BM843278 stomach .f-u 2723 to 3237 1 to 515       515/515
(100 %)
0 diff
(100 %id)
BM818302 stomach .f-u 2723 to 3240 1 to 518       518/518
(100 %)
0 diff
(100 %id)
CA426558 cell lines, Chondrosarcoma .f-u 2733 to 3470 756 to 19   AAA   738/738
(100 %)
2 diff
(99.8 %id)
CD366651 Alveolar Macrophage, lung .f-u 2738 to 3470 751 to 19   AAA   733/733
(100 %)
1 diff
(99.9 %id)
AI208913   .f-u 2743 to 3465 730 to 9       722/732
(98 %)
0 diff
(100 %id)
BU631719 cell lines, Chondrosarcoma .f-u 2752 to 3470 737 to 19   AAA   719/719
(100 %)
2 diff
(99.8 %id)
CD365597 Alveolar Macrophage, lung .f-u 2759 to 3470 730 to 19   AAA   712/712
(100 %)
3 diff
(99.6 %id)
AW084526 colon, colonic mucosa from 3 patients with Crohn'sdisease .f-u 2761 to 3473 711 to 1       711/712
(99 %)
15 diff
(97.9 %id)
BE645109 pooled .f-u 2781 to 3469 690 to 1       690/690
(100 %)
21 diff
(97.0 %id)
AA054837   .f-u 2785 to 3058 1 to 265       265/265
(100 %)
10 diff
(96.3 %id)
BQ016990 lung, Metastatic Chondrosarcoma .f-u 2794 to 3470 695 to 19   AAA   677/677
(100 %)
2 diff
(99.8 %id)
BU742228 eye, fetal eye .f-u 2797 to 3470 692 to 19   AAA   674/674
(100 %)
0 diff
(100 %id)
CD367898 Alveolar Macrophage, lung .f-u 2798 to 3470 691 to 19   AAA   673/673
(100 %)
2 diff
(99.8 %id)
CU453687 epidermis .f-u 2801 to 3279 18 to 496       479/499
(95 %)
9 diff
(98.2 %id)
AA234450 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2808 to 3105 7 to 303   fully sequenced,   297/303
(98 %)
6 diff
(98.1 %id)
AA861616   .f-u 2813 to 3436 622 to 1       622/627
(99 %)
20 diff
(96.9 %id)
CA311281 Human Lung Epithelial cells, lung .f-u 2813 to 3470 677 to 19   AAA   659/659
(100 %)
1 diff
(99.9 %id)
CA425665 cell lines, Chondrosarcoma .f-u 2814 to 3470 675 to 19   AAA   657/657
(100 %)
0 diff
(100 %id)
BU628751 Bone, Enchondroma cell line .f-u 2816 to 3470 673 to 19   AAA   655/655
(100 %)
0 diff
(100 %id)
AW027945 Kidney .f-u 2829 to 3470 653 to 12   AAA   642/642
(100 %)
1 diff
(99.9 %id)
AW516247 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .f-u 2832 to 3473 649 to 7       643/651
(98 %)
0 diff
(100 %id)
AI339294 pooled germ cell tumors .f-u 2841 to 3470 641 to 12   AAA   630/636
(99 %)
12 diff
(98.2 %id)
CB528741 Aveolar Macrophage, lung .f-u 2853 to 3470 638 to 19   AAA   620/620
(100 %)
2 diff
(99.7 %id)
BE547885 cervical carcinoma cell line, cervix .f-u 2882 to 3471 1 to 586       586/597
(98 %)
7 diff
(98.9 %id)
EL950157 eyeball .f-u 2897 to 3415 1 to 519       519/519
(100 %)
6 diff
(98.9 %id)
AW835278 leiomios .f-u 2903 to 3372 1 to 471       471/471
(100 %)
8 diff
(98.4 %id)
DB318488   .f-u 2911 to 3470 561 to 1   to resequence,   561/561
(100 %)
1 diff
(99.9 %id)
DB328302 placenta .f-u 2915 to 3470 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
AW300670 colon, moderately differentiated adenocarcinoma .f-u 2934 to 3470 537 to 1       537/537
(100 %)
2 diff
(99.7 %id)
AA644048 colon, colon tumor RER+ .f-u 2936 to 3473 540 to 3       538/540
(99 %)
0 diff
(100 %id)
CA414461 Chondrosarcoma Grade II, Left Pelvis .f-u 2938 to 3470 551 to 19   AAA   533/533
(100 %)
0 diff
(100 %id)
BG231587 blood, lymphocyte .f-u 2940 to 3473 534 to 1       534/534
(100 %)
1 diff
(99.9 %id)
CB322022 Human Lung Epithelial cells, lung .f-u 2946 to 3470 540 to 14   AAA   527/527
(100 %)
4 diff
(99.3 %id)
AA777632 liver and spleen .f-u 2955 to 3465 511 to 1       511/511
(100 %)
0 diff
(100 %id)
AA906194 pooled .f-u 2955 to 3434 481 to 1       481/481
(100 %)
4 diff
(99.2 %id)
AV652444 corresponding non cancerous liver tissue .f-u 2966 to 3470 1 to 505   AAA Submitted on the opposite strand 505/505
(100 %)
2 diff
(99.7 %id)
AA707230 liver and spleen .f-u 2970 to 3111 142 to 1       142/142
(100 %)
7 diff
(95.1 %id)
AA626213 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2970 to 3111 142 to 1       142/142
(100 %)
2 diff
(98.6 %id)
AI219671 pooled .f-u 2970 to 3473 507 to 4       504/507
(99 %)
0 diff
(100 %id)
AW513341 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f-u 2970 to 3473 506 to 3       504/506
(99 %)
0 diff
(100 %id)
AA314176 colon .f-u 2972 to 3393 1 to 422       422/422
(100 %)
0 diff
(100 %id)
BU145856 dorsal root ganglia .f-u 2984 to 3471 26 to 512       487/560
(86 %)
3 diff
(99.5 %id)
BM670093 eye, fetal eyes .f-u 2984 to 3470 505 to 19   AAA   487/487
(100 %)
2 diff
(99.6 %id)
AI148405 heart .f-u 2988 to 3470 483 to 1       483/483
(100 %)
0 diff
(100 %id)
AI352204   .f-u 2988 to 3473 489 to 3       487/489
(99 %)
0 diff
(100 %id)
BE832838 ovary .f-u 2992 to 3361 8 to 374       367/374
(98 %)
6 diff
(98.4 %id)
CD633033   .f-u 2997 to 3469 1 to 469       469/471
(99 %)
8 diff
(98.4 %id)
AW881026 ovary .f-u 3002 to 3369 8 to 373       366/385
(95 %)
5 diff
(98.8 %id)
AA432281   .f-u 3006 to 3478 472 to 2   fully sequenced,   471/472
(99 %)
6 diff
(98.8 %id)
BI829790 brain, medulla .f-u 3007 to 3473 1 to 467       467/791
(59 %)
2 diff
(99.8 %id)
TI_57176355   .f-u 3007 to 3473 67 to 533       467/857
(54 %)
2 diff
(99.8 %id)
AA628564   .f-u 3009 to 3473 466 to 1       466/466
(100 %)
2 diff
(99.6 %id)
AA872576 germinal center B cell .f-u 3009 to 3111 103 to 1       103/103
(100 %)
0 diff
(100 %id)
AI074683 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 3009 to 3470 460 to 1       460/460
(100 %)
2 diff
(99.6 %id)
AA577616 colon, colon tumor .f-u 3012 to 3470 484 to 27   AAA   458/458
(100 %)
1 diff
(99.8 %id)
W79168 heart .f-u 3013 to 3468 1 to 459   fully sequenced,   459/459
(100 %)
5 diff
(99.0 %id)
AA948463 pooled .f-u 3018 to 3470 449 to 1       449/449
(100 %)
5 diff
(98.9 %id)
AA970937 pooled .f-u 3018 to 3473 461 to 6       456/461
(98 %)
0 diff
(100 %id)
AI079588 senescent fibroblast .f-u 3026 to 3473 453 to 7       447/458
(97 %)
0 diff
(100 %id)
AI082178 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 3027 to 3471 445 to 1       445/445
(100 %)
3 diff
(99.4 %id)
AA564429 colon .f-u 3030 to 3470 441 to 1       441/441
(100 %)
2 diff
(99.6 %id)
AW572590 adenocarcinoma, Pancreas .f-u 3032 to 3473 445 to 5       441/445
(99 %)
0 diff
(100 %id)
AA878052 pharynx, squamous cell carcinoma .f-u 3033 to 3443 411 to 1       411/411
(100 %)
3 diff
(99.3 %id)
AI076711 liver and spleen .f-u 3033 to 3473 443 to 3       441/443
(99 %)
0 diff
(100 %id)
AI479370 pooled .f-u 3036 to 3473 443 to 6       438/443
(98 %)
0 diff
(100 %id)
AW663631 pooled .f-u 3036 to 3473 440 to 3       438/440
(99 %)
0 diff
(100 %id)
AI142605 pooled .f-u 3039 to 3470 431 to 1       431/431
(100 %)
4 diff
(99.1 %id)
AI218509 pooled .f-u 3039 to 3472 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
F19229 pectoral muscle (after mastectomy) .f-u 3041 to 3348 1 to 308       308/308
(100 %)
0 diff
(100 %id)
AA157005   .f-u 3057 to 3473 420 to 2       419/420
(99 %)
0 diff
(100 %id)
AA576400 breast, breast tumor .f-u 3059 to 3471 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AI741306 pooled .f-u 3067 to 3470 415 to 12   AAA   404/404
(100 %)
0 diff
(100 %id)
AA234114 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 3075 to 3470 395 to 1   fully sequenced,   395/395
(100 %)
1 diff
(99.8 %id)
AI536998 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f-u 3075 to 3471 397 to 1       397/397
(100 %)
1 diff
(99.8 %id)
AA983966 pooled germ cell tumors .f-u 3080 to 3470 391 to 1       391/391
(100 %)
0 diff
(100 %id)
AA502282 colon .f-u 3084 to 3470 387 to 1       387/387
(100 %)
0 diff
(100 %id)
AI973267 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f-u 3085 to 3470 385 to 1       385/385
(100 %)
1 diff
(99.8 %id)
AJ705584 bone marrow .f-u 3086 to 3462 3 to 379       377/379
(99 %)
4 diff
(99.0 %id)
AA654259 epithelium (cell line), Prostate .f-u 3097 to 3443 344 to 1       344/344
(100 %)
4 diff
(98.9 %id)
AA654249 epithelium (cell line), Prostate .f-u 3100 to 3443 343 to 1       343/343
(100 %)
1 diff
(99.8 %id)
AW841448 colon_normal .f-u 3105 to 3334 19 to 248       230/248
(92 %)
6 diff
(97.6 %id)
AW070794 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .f-u 3106 to 3470 366 to 1       366/367
(99 %)
6 diff
(98.4 %id)
BQ008062 Chondrosarcoma, Left Pelvis .f-u 3115 to 3470 374 to 19   AAA   356/356
(100 %)
0 diff
(100 %id)
BQ002924 Chondrosarcoma, Left Pelvis .f-u 3117 to 3470 372 to 19   AAA   354/359
(98 %)
0 diff
(100 %id)
AI203491   .f-u 3121 to 3473 354 to 2       353/354
(99 %)
0 diff
(100 %id)
N54575 liver and spleen .f-u 3124 to 3465 344 to 1       344/348
(98 %)
2 diff
(99.5 %id)
AA614115 adrenal adenoma, adrenal gland .f-u 3128 to 3471 344 to 1       344/344
(100 %)
1 diff
(99.8 %id)
F36993 pectoral muscle (after mastectomy) .f-u 3128 to 3470 1 to 342   AAA   342/342
(100 %)
5 diff
(98.6 %id)
F32137 pectoral muscle (after mastectomy) .f-u 3140 to 3465 1 to 326       326/326
(100 %)
2 diff
(99.4 %id)
AW956078   .f-u 3144 to 3432 1 to 289       289/289
(100 %)
20 diff
(93.1 %id)
AA335858 epididymis .f-u 3146 to 3460 1 to 315       315/325
(96 %)
1 diff
(99.7 %id)
AA972130 pooled .f-u 3151 to 3473 327 to 5       323/327
(98 %)
0 diff
(100 %id)
AI934408 Kidney .f-u 3167 to 3468 314 to 4       311/314
(99 %)
0 diff
(100 %id)
AI934398 Kidney .f-u 3167 to 3470 304 to 1       304/304
(100 %)
1 diff
(99.7 %id)
W74297 heart .f-u 3175 to 3470 298 to 1   fully sequenced,   298/298
(100 %)
0 diff
(100 %id)
AA632252 breast .f-u 3188 to 3466 279 to 1       279/279
(100 %)
0 diff
(100 %id)
BM690653 eye, Retina Foveal and Macular .f-u 3191 to 3470 8 to 289   AAA   282/289
(97 %)
2 diff
(99.4 %id)
AA812578   .f-u 3196 to 3434 238 to 1       238/238
(100 %)
1 diff
(99.6 %id)
AA598856   .f-u 3199 to 3471 273 to 1       273/273
(100 %)
0 diff
(100 %id)
AI061164   .f-u 3199 to 3473 279 to 5       275/279
(98 %)
0 diff
(100 %id)
AI270620 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f-u 3212 to 3470 295 to 37   AAA   259/259
(100 %)
6 diff
(97.7 %id)
BM194355 leukopheresis .f-u 3224 to 3465 263 to 22   AAA   242/245
(98 %)
3 diff
(98.8 %id)
AI446805 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f-u 3235 to 3470 236 to 1       236/236
(100 %)
0 diff
(100 %id)
AI538788 serous papillary carcinoma, high grade, 2pooled tumors, uterus .f-u 3236 to 3470 253 to 19   AAA   235/235
(100 %)
0 diff
(100 %id)
AA861925 parathyroid gland, parathyroid tumor .f-u 3259 to 3434 175 to 1       175/175
(100 %)
3 diff
(98.3 %id)
EC540006 Prostate .f-u 3270 to 3382 1 to 112       112/112
(100 %)
5 diff
(95.6 %id)
AA994456 pooled .f-u 3281 to 3470 190 to 1       190/190
(100 %)
0 diff
(100 %id)
AA828089 colon, colon tumor .f-u 3312 to 3443 132 to 1       132/132
(100 %)
1 diff
(99.3 %id)
T25504   .f-u 3331 to 3470 139 to 1       139/139
(100 %)
1 diff
(99.3 %id)
BC015951.
matches multiple genes
leiomyosarcoma, uterus, Uterus, leiomyosarcoma .f-u 3352 to 3473 1 to 122   available from MGC, also hits gene CDS2 122/158
(77 %)
1 diff
(99.4 %id)
BE886870 leiomyosarcoma, uterus .f-u 3372 to 3473 1 to 102       102/123
(82 %)
1 diff
(99.2 %id)
BF816673 colon_ins .g-u 1 to 503 1 to 503   tiling clone,   503/503
(100 %)
7 diff
(98.7 %id)
AW631023 2 pooled high-grade transitional celltumors, genitourinary tract .g-u 4 to 357 15 to 368   tiling clone,   354/368
(96 %)
5 diff
(98.7 %id)
BF813700 colon_ins .g-u 8 to 511 517 to 14   tiling clone, Submitted on the opposite strand 504/520
(96 %)
0 diff
(100 %id)
BF816734 colon_ins .g-u 8 to 484 476 to 1   tiling clone, Submitted on the opposite strand 476/478
(99 %)
4 diff
(99.2 %id)
BF826452 head_normal .g-u 8 to 476 472 to 5     Submitted on the opposite strand 468/488
(95 %)
0 diff
(100 %id)
BF818005 colon_ins .g-u 13 to 511 523 to 15     Submitted on the opposite strand 509/524
(97 %)
0 diff
(100 %id)
BF816735 colon_ins .g-u 16 to 500 18 to 503   tiling clone,   486/503
(96 %)
5 diff
(99.1 %id)
AK094405 cerebellum .g-u 514 to 3294 1 to 2780 E55* tiling clone, available from FLJ,   2780/2789
(99 %)
4 diff
(99.9 %id)
BI038372 nervous_tumor .g-u 514 to 878 382 to 15       368/382
(96 %)
0 diff
(100 %id)
DA067020 cerebellum .g-u 515 to 1090 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
AW627717 2 pooled high-grade transitional celltumors, genitourinary tract .g-u 1022 to 1360 346 to 8       339/346
(97 %)
0 diff
(100 %id)
DB297329 cerebellum .g-u 2765 to 3294 540 to 10       531/540
(98 %)
0 diff
(100 %id)
BI042347 nervous_tumor .g-u 3153 to 3657 510 to 5   tiling clone,   506/511
(99 %)
0 diff
(100 %id)
BQ787134.
matches multiple genes
Pancreas, Purified pancreatic islet .g-u 3234 to 3751 1 to 518   tiling clone, also hits gene C9orf78 518/518
(100 %)
6 diff
(98.9 %id)
AV704087 adrenal gland .h 1 to 681 1 to 681 V42E tiling clone,   681/681
(100 %)
6 diff
(99.2 %id)
BU942368 mixed (pool of 40 RNAs) .i 1 to 328 1 to 328 T64S tiling clone, AAA   328/328
(100 %)
3 diff
(99.1 %id)
BC064541 Brain, hippocampus .j 1 to 1501 1 to 1501 exact tiling clone, available from MGC, AAA   1501/1501
(100 %)
0 diff
(100 %id)
BM807350 brain, hippocampus .j 1 to 879 12 to 912   available from MGC,   901/1186
(75 %)
40 diff
(96.7 %id)
BF515180   .j 599 to 1036 14 to 451     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
BM705014 eye, lens .j 616 to 1164 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
R47369   .j 630 to 776 150 to 5       146/150
(97 %)
1 diff
(99.4 %id)
TI_227715101   .j 631 to 1501 957 to 97 N2X P3L A4R E5K V6C ... AAA   861/980
(87 %)
13 diff
(98.7 %id)
BU734587 eye, lens .j 1367 to 1501 153 to 19   AAA   135/135
(100 %)
0 diff
(100 %id)
BG325430 Kidney, renal cell adenocarcinoma .k 1 to 759 1 to 765 P138L A139H G141A F142S E143N ... tiling clone,   765/900
(85 %)
26 diff
(97.2 %id)
BX508235   .l 1 to 679 1 to 678 exact tiling clone,   678/689
(98 %)
2 diff
(99.8 %id)
BI831943 brain, medulla .m 1 to 673 29 to 701 exact tiling clone,   673/701
(96 %)
7 diff
(99.1 %id)
TI_57174071   .m 1 to 673 29 to 701 exact     673/701
(96 %)
7 diff
(99.1 %id)
DB033273 testis .n 1 to 583 2 to 584 exact tiling clone, capped   583/583
(100 %)
1 diff
(99.9 %id)
DB456120 testis .n 15 to 480 1 to 467       467/467
(100 %)
6 diff
(98.8 %id)
DA327354 hippocampus .o 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DB000061 breast, tumor tissue .p 1 to 501 2 to 502 G43W tiling clone, capped   501/501
(100 %)
1 diff
(99.9 %id)
AF327403   Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
AJ303078   Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
AV699472 hepatocellular carcinoma Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
AV695399 hepatocellular carcinoma Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
AV697405 hepatocellular carcinoma Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
AA233896 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene SLC25A28, variant not shown       fully sequenced, This clone was ignored    
AA234031 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus Gene SLC25A28, variant not shown       fully sequenced, This clone was ignored    
AI370724   Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
BG055067 Prostate Gene SLC25A28, variant not shown         Suspected internal deletion, this clone was ignored    
BM990836 lung, Lung Focal Fibrosis Gene SLC25A28, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BM797919 Ascites, stomach Gene SLC25A28, variant not shown         This clone was ignored    
TI_227713737   Gene SLC25A28, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CD742577 Alveolar Macrophage, lung Gene SLC25A28, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g-u, .h, .i, .j, .k, .l, .m, .n, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C