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Gene SLC25A20TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
275 supporting clones for gene SLC25A20 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC360427   .a 1 to 564 1 to 565   tiling clone,   565/565
(100 %)
2 diff
(99.7 %id)
TI_57232590   .a 21 to 695 28 to 701       674/701
(96 %)
8 diff
(98.9 %id)
BI907390 leukocyte .a 25 to 695 1 to 670       670/670
(100 %)
3 diff
(99.6 %id)
NM_000387.4   .a 25 to 1891 1 to 1867 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1867/1867
(100 %)
0 diff
(100 %id)
DC297620   .a 32 to 609 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BE907002 epithelioid carcinoma, Pancreas .a 34 to 681 1 to 654       654/654
(100 %)
24 diff
(96.4 %id)
DC297963   .a 43 to 529 1 to 487       487/487
(100 %)
0 diff
(100 %id)
DC365364 ovary .a 49 to 595 1 to 547       547/547
(100 %)
0 diff
(100 %id)
CX870867 embryonic stem .a 56 to 780 1 to 725       725/725
(100 %)
0 diff
(100 %id)
DB460225 testis .a 57 to 509 1 to 453       453/453
(100 %)
2 diff
(99.6 %id)
TI_57241483   .a 87 to 925 22 to 863       842/871
(96 %)
18 diff
(98.0 %id)
BX487101   .a 98 to 740 1 to 643       643/647
(99 %)
8 diff
(98.8 %id)
BI913588 brain .a 98 to 925 1 to 831       831/839
(99 %)
12 diff
(98.6 %id)
DB114507 thymus .a 98 to 621 2 to 526   capped   525/525
(100 %)
5 diff
(99.1 %id)
DB488157 hypothalamus .a 100 to 511 1 to 416       416/419
(99 %)
36 diff
(91.5 %id)
DA045782 bladder .a 101 to 666 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BP218903 caudate nucleus .a 101 to 682 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA610269   .a 101 to 645 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA729290   .a 101 to 849 2 to 752   capped   751/761
(98 %)
11 diff
(98.6 %id)
DA894011 skeletal muscle .a 101 to 579 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
DA935747 Spleen .a 101 to 700 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
DA007768   .a 102 to 648 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA561423 heart .a 102 to 666 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA565797 heart .a 102 to 668 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BP264014 small intestine .a 102 to 688 1 to 587       587/587
(100 %)
5 diff
(99.2 %id)
DA612508   .a 102 to 677 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
CB117017 Liver .a 102 to 454 1 to 353       353/353
(100 %)
0 diff
(100 %id)
DA637433 Liver .a 102 to 657 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA824948 pericardium .a 102 to 648 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA827553 pericardium .a 102 to 662 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB005783 breast, tumor tissue .a 102 to 656 2 to 559   capped   558/558
(100 %)
4 diff
(99.3 %id)
DB259584 uterus .a 102 to 681 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BI603415 brain, hypothalamus .a 103 to 908 9 to 813       805/821
(98 %)
17 diff
(98.0 %id)
TI_45212629   .a 103 to 908 100 to 904       805/912
(88 %)
22 diff
(97.6 %id)
BG743578 skin .a 106 to 974 1 to 877       877/983
(89 %)
22 diff
(97.8 %id)
DA912337   .a 106 to 656 10 to 560   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB108851 thymus .a 106 to 671 9 to 574   capped   566/566
(100 %)
1 diff
(99.9 %id)
AK312962   .a 108 to 1105 1 to 998 exact     998/998
(100 %)
0 diff
(100 %id)
DA031992   .a 109 to 670 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BP198278 adrenal gland .a 110 to 691 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BG282339 melanotic melanoma, skin .a 111 to 808 1 to 711       711/714
(99 %)
22 diff
(97.0 %id)
DA979404 synovial membrane tissue from rheumatioidarthritis .a 111 to 677 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA565054 heart .a 112 to 675 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BP246967 Kidney .a 112 to 690 1 to 580       580/581
(99 %)
6 diff
(99.0 %id)
DA625343 Kidney .a 112 to 661 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA000999   .a 113 to 616 2 to 506   capped   505/511
(98 %)
2 diff
(99.7 %id)
DA007148   .a 113 to 685 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA428448 colon .a 113 to 405 2 to 295   capped   294/294
(100 %)
1 diff
(99.7 %id)
DA469978   .a 113 to 691 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA567256 heart .a 113 to 664 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BM452152 melanotic melanoma, skin .a 113 to 1048 1 to 938       939/1092
(85 %)
30 diff
(97.3 %id)
DA607931   .a 113 to 616 2 to 505   capped   504/519
(97 %)
2 diff
(99.7 %id)
DA618920   .a 113 to 586 2 to 477   capped   476/476
(100 %)
3 diff
(99.4 %id)
DA640556 Liver .a 113 to 631 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
DA667383 esophagus .a 113 to 657 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DB243237 stomach, tumor tissue .a 113 to 670 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA036354 breast .a 114 to 683 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA928358 small intestine .a 114 to 685 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DB272398 uterus .a 114 to 659 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BI912106 leukocyte .a 115 to 932 1 to 828       826/828
(99 %)
20 diff
(97.6 %id)
TI_57236612   .a 115 to 932 1 to 828       826/828
(99 %)
20 diff
(97.6 %id)
BM193444 leukopheresis .a 115 to 518 1 to 406       406/406
(100 %)
22 diff
(94.6 %id)
BE246659 leukopheresis .a 115 to 479 1 to 365       365/366
(99 %)
7 diff
(98.1 %id)
BI765055 pooled colon, kidney, stomach .a 117 to 935 1 to 833       724/836
(86 %)
31 diff
(96.3 %id)
TI_57152944   .a 117 to 919 65 to 880       816/900
(90 %)
44 diff
(95.2 %id)
DR760531 embryonic stem .a 118 to 888 1 to 771       771/771
(100 %)
0 diff
(100 %id)
TI_57146986   .a 118 to 917 20 to 816       797/826
(96 %)
9 diff
(99.0 %id)
BI918616 brain .a 119 to 914 1 to 796       796/817
(97 %)
6 diff
(99.3 %id)
BQ440702 melanotic melanoma, skin .a 119 to 917 1 to 805       805/904
(89 %)
11 diff
(98.8 %id)
TI_57238540   .a 119 to 914 1 to 796       796/817
(97 %)
6 diff
(99.3 %id)
AU098746   .a 120 to 401 17 to 298       282/298
(94 %)
6 diff
(98.0 %id)
BX378340 Placenta Cot 25-normalized .a 123 to 1042 1 to 923       923/923
(100 %)
12 diff
(98.7 %id)
BX464318 adult brain, brain .a 125 to 1042 1 to 904       904/904
(100 %)
17 diff
(98.2 %id)
BX428106 adult brain, brain .a 125 to 912 1 to 788       788/788
(100 %)
0 diff
(100 %id)
BE795144 lung, small cell carcinoma .a 125 to 1031 1 to 900       900/1102
(81 %)
38 diff
(96.6 %id)
BI760788 pooled colon, kidney, stomach .a 125 to 917 1 to 790       790/800
(98 %)
4 diff
(99.5 %id)
DA892333 rectum .a 127 to 693 2 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
BG281636 melanotic melanoma, skin .a 128 to 804 1 to 677       677/678
(99 %)
28 diff
(95.9 %id)
BG281952 melanotic melanoma, skin .a 128 to 954 1 to 825       825/825
(100 %)
12 diff
(98.6 %id)
BC001689 Skin, melanotic melanoma. .a 129 to 1882 1 to 1754 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1754/1754
(100 %)
0 diff
(100 %id)
CD703564 normal nasopharynx .a 129 to 588 31 to 490       460/490
(93 %)
14 diff
(97.2 %id)
BJ995127 hepatoblastoma .a 129 to 728 1 to 600       600/600
(100 %)
1 diff
(99.9 %id)
BE410508 choriocarcinoma, placenta .a 130 to 521 10 to 402       393/402
(97 %)
6 diff
(98.6 %id)
BX498669 Liver .a 131 to 542 1 to 412       412/412
(100 %)
9 diff
(97.9 %id)
DA588209 lung .a 131 to 711 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
BM922847 leukocyte .a 131 to 916 1 to 796       796/1047
(76 %)
27 diff
(97.5 %id)
BP226152   .a 132 to 705 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
BF125245 melanotic melanoma, skin .a 132 to 808 1 to 678       678/697
(97 %)
18 diff
(97.5 %id)
DA372828 thalamus .a 133 to 665 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
BP223904 colon mucosa .a 133 to 804 1 to 681       681/789
(86 %)
15 diff
(98.1 %id)
DA424982 colon .a 133 to 702 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA930242 small intestine .a 133 to 706 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB116230 thymus .a 133 to 676 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB182331 liver, tumor tissue .a 133 to 693 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BP377821 uterus .a 137 to 708 1 to 570       570/570
(100 %)
5 diff
(99.2 %id)
DA686350   .a 138 to 683 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BM272438 Pancreas, Purified pancreatic islet .a 140 to 772 1 to 633       633/633
(100 %)
10 diff
(98.5 %id)
BF976071 B-cells, primary B-cells from tonsils (cell line) .a 146 to 851 1 to 714       714/1044
(68 %)
21 diff
(98.0 %id)
DA925792 small intestine .a 146 to 732 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
CB154943 brain .a 147 to 778 1 to 632       632/632
(100 %)
0 diff
(100 %id)
BE276312 melanotic melanoma, skin .a 147 to 808 1 to 661       661/676
(97 %)
4 diff
(99.5 %id)
BE387806 endometrium, adenocarcinoma cell line, uterus .a 148 to 734 1 to 586       586/659
(88 %)
10 diff
(98.5 %id)
BE387987 endometrium, adenocarcinoma cell line, uterus .a 148 to 706 1 to 561       561/561
(100 %)
3 diff
(99.5 %id)
BE388758 endometrium, adenocarcinoma cell line, uterus .a 148 to 740 1 to 593       593/619
(95 %)
12 diff
(98.1 %id)
BE389186 endometrium, adenocarcinoma cell line, uterus .a 148 to 698 1 to 551       551/551
(100 %)
0 diff
(100 %id)
BF125671 melanotic melanoma, skin .a 148 to 812 1 to 657       657/916
(71 %)
17 diff
(98.2 %id)
DA969035 stomach .a 148 to 727 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB007384 cervix, tumor tissue .a 148 to 723 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
CR620282 B cells (Ramos cell line) Cot 25-normalized .a 149 to 1855 1 to 1707 exact     1707/1707
(100 %)
0 diff
(100 %id)
BX346282   .a 149 to 995 1 to 847   fully sequenced,   847/847
(100 %)
4 diff
(99.6 %id)
TI_57170853   .a 149 to 810 32 to 693       662/693
(95 %)
6 diff
(99.2 %id)
R11780 whole brain .a 150 to 525 1 to 376       376/433
(86 %)
5 diff
(98.9 %id)
CN409636 embryonic stem cells, DMSO-treated H9 cellline .a 152 to 820 1 to 668       668/668
(100 %)
2 diff
(99.8 %id)
AL553233 placenta, Placenta Cot 25-normalized .a 152 to 661 1 to 510       510/510
(100 %)
6 diff
(98.9 %id)
BI830155 brain, medulla .a 152 to 810 1 to 659       659/659
(100 %)
1 diff
(99.9 %id)
Y10319   .a 152 to 1382 15 to 1245 exact     1231/1245
(98 %)
6 diff
(99.6 %id)
BI909571 leukocyte .a 153 to 847 1 to 698       698/807
(86 %)
16 diff
(98.1 %id)
BG696795 skin .a 154 to 872 1 to 718       718/718
(100 %)
2 diff
(99.8 %id)
BI758341 brain .a 154 to 680 11 to 541       531/649
(81 %)
10 diff
(98.5 %id)
TI_57218138   .a 154 to 680 11 to 541       531/649
(81 %)
10 diff
(98.5 %id)
TI_57237844   .a 154 to 847 35 to 731       697/840
(82 %)
20 diff
(97.7 %id)
DR004382 placenta .a 154 to 850 17 to 712       696/712
(97 %)
8 diff
(98.9 %id)
CA487919   .a 157 to 895 1 to 745       745/797
(93 %)
19 diff
(97.7 %id)
BU190740 ductal carcinoma, cell line, Pancreas .a 158 to 1041 1 to 889       889/1055
(84 %)
12 diff
(98.9 %id)
BQ687270 ductal carcinoma, cell line, Pancreas .a 158 to 1015 1 to 866       866/883
(98 %)
13 diff
(98.6 %id)
BI518441 leukocyte .a 159 to 1095 1 to 956       826/957
(86 %)
17 diff
(98.3 %id)
TI_44460077   .a 159 to 917 29 to 790       762/985
(77 %)
11 diff
(98.9 %id)
TI_57235730   .a 160 to 894 28 to 762       735/762
(96 %)
6 diff
(99.3 %id)
AL528874 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 163 to 1042 1 to 881       881/881
(100 %)
0 diff
(100 %id)
CD672668 eye, Iris .a 163 to 782 1 to 620       620/621
(99 %)
1 diff
(99.9 %id)
BI910439 leukocyte .a 164 to 894 1 to 731       731/731
(100 %)
0 diff
(100 %id)
BQ073117 leukocyte .a 168 to 808 1 to 642       642/1069
(60 %)
10 diff
(99.1 %id)
BE779072 eye, retinoblastoma .a 174 to 808 1 to 640       640/994
(64 %)
17 diff
(98.3 %id)
BM550444 melanotic melanoma, skin .a 174 to 1042 1 to 874       874/1071
(81 %)
7 diff
(99.4 %id)
BP280345   .a 187 to 700 1 to 514       514/519
(99 %)
2 diff
(99.7 %id)
TI_1948103806   .a 199 to 647 129 to 577   fully sequenced,   449/577
(77 %)
6 diff
(99.0 %id)
CV028270 mixed .a 200 to 759 1 to 562       562/562
(100 %)
15 diff
(97.4 %id)
BF213497 bone marrow, from acute myelogenous leukemia .a 360 to 902 1 to 540       540/540
(100 %)
3 diff
(99.5 %id)
BP296644   .a 392 to 976 1 to 585       585/585
(100 %)
0 diff
(100 %id)
TI_1948103661   .a 397 to 1104 838 to 124       715/1472
(48 %)
11 diff
(99.3 %id)
BG252775 adenocarcinoma, cell line, Liver .a 402 to 1192 1 to 782       782/971
(80 %)
25 diff
(97.5 %id)
BQ335505 marrow .a 439 to 791 1 to 349       349/349
(100 %)
4 diff
(98.9 %id)
AA378439 synovial membrane .a 488 to 759 1 to 272       272/272
(100 %)
0 diff
(100 %id)
BG431499 Kidney .a 506 to 1240 1 to 742       742/742
(100 %)
15 diff
(98.0 %id)
BM313304 Pancreas, Purified pancreatic islet .a 539 to 1074 1 to 536       536/537
(99 %)
5 diff
(99.1 %id)
CK822273 Pancreas, Purified pancreatic islet .a 544 to 917 1 to 374     Submitted on the opposite strand 374/415
(90 %)
6 diff
(98.6 %id)
CF596147 Stomach, adenocarcinoma .a 580 to 1305 1 to 727       727/731
(99 %)
6 diff
(99.2 %id)
TI_1948103807   .a 586 to 1104 641 to 123   fully sequenced,   519/641
(80 %)
0 diff
(100 %id)
BG216965   .a 617 to 1229 1 to 613       613/799
(76 %)
30 diff
(96.3 %id)
BM554726 duodenal adenocarcinoma, cell line, small intestine .a 644 to 1644 1 to 1009       1009/1041
(96 %)
29 diff
(97.3 %id)
CD172506 White Matter .a 644 to 1484 1 to 844       844/844
(100 %)
6 diff
(99.3 %id)
EC562978 Prostate .a 694 to 790 97 to 1       97/97
(100 %)
0 diff
(100 %id)
EC445705 Prostate .a 703 to 800 96 to 1       96/96
(100 %)
2 diff
(98.0 %id)
EC474541 Prostate .a 703 to 800 95 to 1       95/95
(100 %)
3 diff
(96.9 %id)
EC445425 Prostate .a 708 to 800 92 to 1       92/96
(95 %)
1 diff
(99.0 %id)
EC503756 Prostate .a 708 to 800 91 to 1       91/95
(95 %)
2 diff
(97.9 %id)
EC565115 Prostate .a 711 to 808 98 to 1       98/98
(100 %)
0 diff
(100 %id)
CF596450 Stomach, adenocarcinoma .a 713 to 1243 1 to 538       538/942
(57 %)
22 diff
(97.7 %id)
Z28872 leg muscle, skeletal muscle .a 746 to 1040 1 to 295       295/295
(100 %)
1 diff
(99.7 %id)
F08483 brain, total brain .a 756 to 1085 1 to 330       330/330
(100 %)
0 diff
(100 %id)
AL576290 placenta, Placenta Cot 25-normalized .a 807 to 1858 1049 to 1       1049/1108
(94 %)
11 diff
(99.1 %id)
BU959615 mixed (pool of 40 RNAs) .a 814 to 1322 1 to 513       513/823
(62 %)
17 diff
(98.0 %id)
BX464316 adult brain, brain .a 847 to 1844 980 to 1       980/996
(98 %)
36 diff
(96.4 %id)
BX344524   .a 882 to 1850 968 to 1       968/968
(100 %)
5 diff
(99.5 %id)
AA305590 colon .a 886 to 1332 8 to 454       447/454
(98 %)
6 diff
(98.7 %id)
AW955509   .a 887 to 1511 1 to 626       626/633
(98 %)
9 diff
(98.6 %id)
BQ326264 colon_normal .a 917 to 1293 383 to 10       374/384
(97 %)
1 diff
(99.8 %id)
AV688103 hepatocellular carcinoma .a 928 to 1302 1 to 375       375/384
(97 %)
6 diff
(98.5 %id)
CD722123 eye, lacrimal gland .a 947 to 1537 1 to 591       591/591
(100 %)
0 diff
(100 %id)
BX346281   .a 965 to 1845 891 to 11   fully sequenced,   881/891
(98 %)
9 diff
(99.0 %id)
BM853106 Ascites, stomach .a 972 to 1485 1 to 515       515/515
(100 %)
1 diff
(99.9 %id)
N87428   .a 973 to 1142 1 to 169       169/170
(99 %)
10 diff
(94.2 %id)
N77642 liver and spleen .a 1024 to 1239 1 to 216       216/216
(100 %)
4 diff
(98.2 %id)
BX374010   .a 1042 to 1879 844 to 1       844/927
(91 %)
31 diff
(96.7 %id)
TI_149315596   .a 1043 to 1882 919 to 83   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 837/1031
(81 %)
19 diff
(98.2 %id)
BX341850   .a 1044 to 1855 814 to 5       810/814
(99 %)
0 diff
(100 %id)
BG110872 Bone, osteosarcoma, cell line .a 1046 to 1661 13 to 633       621/947
(65 %)
8 diff
(99.2 %id)
BX392543 Placenta Cot 25-normalized .a 1048 to 1886 839 to 1       839/847
(99 %)
4 diff
(99.6 %id)
BF856071 prostate_normal .a 1070 to 1511 446 to 4     Submitted on the opposite strand 443/446
(99 %)
0 diff
(100 %id)
BP262633 small intestine .a 1073 to 1656 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BM681203 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1144 to 1698 568 to 15   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 554/572
(96 %)
11 diff
(98.1 %id)
TI_149303948   .a 1181 to 1888 796 to 88   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 709/709
(100 %)
4 diff
(99.5 %id)
CA775940 Pancreas, Purified pancreatic islet .a 1195 to 1862 693 to 26       668/700
(95 %)
0 diff
(100 %id)
BQ045457 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1207 to 1882 694 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 676/676
(100 %)
2 diff
(99.8 %id)
BQ018220 lung, Metastatic Chondrosarcoma .a 1208 to 1891 703 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 685/685
(100 %)
2 diff
(99.8 %id)
BU633773 cell lines, Chondrosarcoma .a 1208 to 1888 698 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 680/680
(100 %)
1 diff
(99.9 %id)
BP432620   .a 1212 to 1569 1 to 357       357/357
(100 %)
4 diff
(98.9 %id)
BM981857 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1217 to 1888 691 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 673/673
(100 %)
1 diff
(99.9 %id)
BM727778 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1221 to 1828 1 to 608       608/608
(100 %)
4 diff
(99.4 %id)
BQ015941 lung, Metastatic Chondrosarcoma .a 1226 to 1889 681 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 663/663
(100 %)
2 diff
(99.7 %id)
CB054066 brain, glioblastoma (pooled) .a 1239 to 1866 1 to 628   fully sequenced,   628/628
(100 %)
5 diff
(99.3 %id)
AL528873 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .a 1252 to 1820 608 to 38       571/608
(93 %)
0 diff
(100 %id)
BQ026854 Chondrosarcoma, Left Pelvis .a 1267 to 1888 640 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 622/622
(100 %)
0 diff
(100 %id)
TI_149314947   .a 1271 to 1884 729 to 115       615/1051
(58 %)
0 diff
(100 %id)
AW627978 pooled .a 1284 to 1701 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
CB306414 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1298 to 1880 604 to 21   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 584/586
(99 %)
0 diff
(100 %id)
CB054065 brain, glioblastoma (pooled) .a 1300 to 1893 614 to 21   fully sequenced,   594/614
(96 %)
5 diff
(99.2 %id)
AA521247 germinal center B cell .a 1301 to 1889 609 to 20   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 590/590
(100 %)
3 diff
(99.5 %id)
AA779691   .a 1311 to 1888 583 to 6       578/583
(99 %)
0 diff
(100 %id)
BJ995128 hepatoblastoma .a 1334 to 1846 513 to 1       513/513
(100 %)
0 diff
(100 %id)
BX428105 adult brain, brain .a 1357 to 1847 492 to 1       492/492
(100 %)
4 diff
(99.2 %id)
N58264 liver and spleen .a 1419 to 1888 479 to 5       475/479
(99 %)
0 diff
(100 %id)
AK301744 testis .b 1 to 1376 9 to 1384 exact tiling clone,   1384/1384
(100 %)
1 diff
(100.0 %id)
DC394959 testis .b 1 to 557 9 to 566       566/566
(100 %)
2 diff
(99.7 %id)
CR607188 T cells (Jurkat cell line) Cot10-normalized .c 1 to 1571 1 to 1571 exact tiling clone,   1571/1571
(100 %)
0 diff
(100 %id)
BX344525   .c 1 to 893 1 to 890 P30H N227T L228C     890/890
(100 %)
5 diff
(99.5 %id)
AA993695   .c 1184 to 1585 406 to 5   tiling clone,   402/406
(99 %)
0 diff
(100 %id)
T71468 liver and spleen .d 1 to 358 1 to 365   tiling clone,   365/421
(86 %)
8 diff
(98.1 %id)
AV708954 adrenal gland .d 236 to 745 1 to 506       506/693
(73 %)
61 diff
(91.2 %id)
CU453613 epidermis .d 257 to 1056 814 to 16 exact tiling clone, Submitted on the opposite strand 799/814
(98 %)
0 diff
(100 %id)
T71321 liver and spleen .d 906 to 1245 347 to 2   tiling clone,   346/347
(99 %)
0 diff
(100 %id)
BG912271 anaplastic oligodendroglioma with 1p/19qloss, brain .e-u 1 to 620 1 to 616 C32A L33C F34S L35W G36D tiling clone,   616/616
(100 %)
8 diff
(98.8 %id)
CR980706 T-Lymphocytes .e-u 237 to 782 1 to 546   tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 546/546
(100 %)
0 diff
(100 %id)
BQ361410 ovary .f -8 to 182 193 to 2   tiling clone,   192/216
(88 %)
8 diff
(96.3 %id)
BI222785 cervical carcinoma cell line, cervix .f 124 to 687 32 to 595 exact tiling clone,   564/614
(91 %)
2 diff
(99.7 %id)
AA630329   .f 125 to 687 564 to 1 V59G S61*     564/564
(100 %)
4 diff
(99.3 %id)
AI096877 brain, glioblastoma (pooled) .f 152 to 686 540 to 6       535/540
(99 %)
0 diff
(100 %id)
AW665796 pooled .f 154 to 682 529 to 1       529/529
(100 %)
0 diff
(100 %id)
AV719495 corresponding non cancerous liver tissue .f 157 to 679 523 to 1     Submitted on the opposite strand 523/523
(100 %)
32 diff
(93.9 %id)
AW025995 Kidney .f 180 to 681 503 to 1       503/503
(100 %)
1 diff
(99.9 %id)
BP386226 pancreatic islet .f 189 to 683 1 to 496     Submitted on the opposite strand 496/500
(99 %)
2 diff
(99.6 %id)
AI368032   .f 206 to 679 477 to 4       474/477
(99 %)
0 diff
(100 %id)
AA877164 Kidney .f 213 to 687 476 to 2       475/476
(99 %)
0 diff
(100 %id)
AA890480 parathyroid gland, parathyroid tumor .f 215 to 681 467 to 1       467/467
(100 %)
0 diff
(100 %id)
AI633606 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 220 to 687 471 to 4       468/471
(99 %)
0 diff
(100 %id)
AI088398 uterus .f 221 to 685 465 to 1       465/465
(100 %)
0 diff
(100 %id)
BM272228 Pancreas, Purified pancreatic islet .f 222 to 687 464 to 1       464/464
(100 %)
4 diff
(99.2 %id)
AI418890 brain, glioblastoma (pooled) .f 230 to 683 454 to 1       454/454
(100 %)
0 diff
(100 %id)
AW297095   .f 245 to 681 455 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 437/437
(100 %)
0 diff
(100 %id)
AI080229 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 246 to 687 442 to 1       442/442
(100 %)
0 diff
(100 %id)
BG167844 hypernephroma, cell line, Kidney .f 247 to 687 1 to 444       444/462
(96 %)
7 diff
(98.5 %id)
AJ707258 heart .f 250 to 681 1 to 432   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 432/432
(100 %)
4 diff
(99.1 %id)
DB525665 testis .f 250 to 681 1 to 431     Submitted on the opposite strand 431/431
(100 %)
1 diff
(99.8 %id)
AI051836   .f 252 to 688 441 to 5       437/441
(99 %)
0 diff
(100 %id)
AI278210 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 252 to 687 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AA568698 colon, colon tumor RER+ .f 258 to 683 424 to 1       424/424
(100 %)
3 diff
(99.3 %id)
AI142846 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 260 to 688 429 to 1       429/429
(100 %)
0 diff
(100 %id)
AI080227 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 263 to 687 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI369786 anaplastic oligodendroglioma, brain .f 271 to 687 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
AW474662 lymph node, lymphoma, follicular mixed small and largecell .f 272 to 687 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
FN106942 breast carcinoma .f 284 to 381 1 to 98       98/101
(97 %)
1 diff
(99.1 %id)
AI288968 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 291 to 688 409 to 12   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 398/398
(100 %)
2 diff
(99.5 %id)
AJ346187 pectoral muscle (after mastectomy) .f 299 to 683 1 to 384       384/388
(98 %)
4 diff
(99.0 %id)
BX111148 parathyroid gland, parathyroid tumor .f 299 to 687 1 to 390   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 390/390
(100 %)
1 diff
(99.8 %id)
W37664 parathyroid gland, parathyroid tumor .f 299 to 676 1 to 382       382/382
(100 %)
4 diff
(99.0 %id)
AI089619 uterus .f 303 to 688 386 to 1       386/386
(100 %)
0 diff
(100 %id)
AI088210 heart .f 306 to 688 389 to 8       382/389
(98 %)
0 diff
(100 %id)
AJ346649 pectoral muscle (after mastectomy) .f 310 to 501 1 to 192       192/192
(100 %)
0 diff
(100 %id)
BM313026 Pancreas, Purified pancreatic islet .f 316 to 685 377 to 7       371/377
(98 %)
0 diff
(100 %id)
AI814864 adenocarcinoma, Pancreas .f 316 to 687 373 to 2       372/373
(99 %)
0 diff
(100 %id)
AW073392 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .f 316 to 687 399 to 28   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 372/382
(97 %)
7 diff
(98.2 %id)
AW181968 pooled .f 318 to 683 367 to 2       366/367
(99 %)
0 diff
(100 %id)
T91827 liver and spleen .f 322 to 664 350 to 1       350/351
(99 %)
7 diff
(98.1 %id)
AI351921 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 326 to 681 356 to 1       356/356
(100 %)
2 diff
(99.5 %id)
AI392993 B-cell, chronic lymphotic leukemia .f 326 to 681 372 to 17   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 356/356
(100 %)
0 diff
(100 %id)
CK822274 Pancreas, Purified pancreatic islet .f 332 to 642 312 to 1     Submitted on the opposite strand 312/312
(100 %)
6 diff
(98.1 %id)
AA846176 parathyroid gland, parathyroid tumor .f 335 to 687 363 to 10       354/363
(97 %)
0 diff
(100 %id)
AV740729 cord Blood .f 336 to 678 19 to 360       342/391
(87 %)
2 diff
(99.5 %id)
AI784059 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 343 to 681 350 to 13   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 338/338
(100 %)
1 diff
(99.8 %id)
AA600023 bone marrow stroma .f 347 to 687 358 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 341/341
(100 %)
1 diff
(99.8 %id)
AA865235 2 pooled tumors (clear cell type), Kidney .f 353 to 688 344 to 9       336/344
(97 %)
0 diff
(100 %id)
BE926049 breast_normal .f 356 to 539 1 to 184       184/184
(100 %)
10 diff
(94.6 %id)
AA863343 Kidney .f 356 to 686 339 to 9       331/339
(97 %)
0 diff
(100 %id)
Z25247 leg muscle, skeletal muscle .f 367 to 687 321 to 1       321/321
(100 %)
2 diff
(99.4 %id)
AA897631 pooled .f 382 to 688 325 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 308/308
(100 %)
1 diff
(99.7 %id)
BP384157 pancreatic islet .f 387 to 687 1 to 302     Submitted on the opposite strand 302/308
(98 %)
2 diff
(99.4 %id)
AI425000 pooled .f 389 to 688 316 to 17   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 300/300
(100 %)
0 diff
(100 %id)
AA938220 metastatic prostate bone lesion .f 408 to 687 302 to 24       279/302
(92 %)
0 diff
(100 %id)
AI500060 lymph node, lymphoma, follicular mixed small and largecell .f 420 to 687 271 to 3       269/271
(99 %)
0 diff
(100 %id)
AI368490 brain, glioblastoma (pooled) .f 435 to 686 253 to 2       252/253
(99 %)
0 diff
(100 %id)
AW299735 Kidney .f 450 to 689 240 to 1   tiling clone,   240/240
(100 %)
0 diff
(100 %id)
AI192022   .f 455 to 687 237 to 4       234/237
(98 %)
0 diff
(100 %id)
AW591830 lymph node, lymphoma, follicular mixed small and largecell .f 456 to 679 244 to 20   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 225/227
(99 %)
0 diff
(100 %id)
AI393014 B-cell, chronic lymphotic leukemia .f 462 to 681 236 to 17   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 220/220
(100 %)
0 diff
(100 %id)
BF512640   .f 470 to 687 237 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 220/231
(95 %)
5 diff
(97.9 %id)
AI361172 brain, glioblastoma (pooled) .f 485 to 683 199 to 1       199/199
(100 %)
0 diff
(100 %id)
DB557612 hypothalamus .f 504 to 687 1 to 184   AAA Submitted on the opposite strand 184/184
(100 %)
10 diff
(94.6 %id)
BX482373   .g-u 1 to 487 9 to 495 exact tiling clone,   487/495
(98 %)
6 diff
(98.8 %id)
AV687743 hepatocellular carcinoma Gene SLC25A20, variant not shown         This clone was ignored    
AV690530 hepatocellular carcinoma Gene SLC25A20, variant not shown         This clone was ignored    
CA306226 Alveolar Macrophage, lung Gene SLC25A20, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AV659890 corresponding non cancerous liver tissue Gene SLC25A20, variant not shown         Submitted on the opposite strand    
DB307866 hippocampus Gene SLC25A20, variant not shown         This clone was ignored    
DA297211 hippocampus Gene SLC25A20, variant not shown       capped This clone was ignored    
BF062810 colon, colon tumor, RER+ Gene SLC25A20, variant not shown         Suspected internal deletion, this clone was ignored    
TI_149286845   Gene SLC25A20, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI