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Gene SLC22A2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
71 supporting clones for gene SLC22A2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CR618035 Placenta Cot 25-normalized .a 1 to 2049 1 to 2049 exact tiling clone,   2049/2049
(100 %)
0 diff
(100 %id)
AL544105 placenta, Placenta Cot 25-normalized .a 1 to 963 1 to 967       967/967
(100 %)
11 diff
(98.9 %id)
DA627057 Kidney .a 9 to 557 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA628327 Kidney .a 11 to 550 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
BI765912 pooled colon, kidney, stomach .a 16 to 744 27 to 753       727/769
(94 %)
12 diff
(98.5 %id)
TI_57148901   .a 16 to 744 27 to 753       727/769
(94 %)
12 diff
(98.5 %id)
TI_57151321   .a 16 to 842 35 to 872       838/887
(94 %)
25 diff
(97.2 %id)
BI762264 pooled colon, kidney, stomach .a 17 to 842 1 to 837       837/852
(98 %)
19 diff
(97.8 %id)
TI_1948233220   .a 71 to 453 136 to 518       383/411
(93 %)
6 diff
(98.6 %id)
TI_1948233525   .a 71 to 732 127 to 797       671/1457
(46 %)
30 diff
(98.0 %id)
EL736654 mixed .a 72 to 652 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA209968 brain .a 138 to 687 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
BI762083 pooled colon, kidney, stomach .a 323 to 780 378 to 839       462/839
(55 %)
12 diff
(98.6 %id)
TI_57151375   .a 323 to 780 413 to 874       462/874
(52 %)
12 diff
(98.7 %id)
BG433846 Kidney .a 340 to 980 1 to 643       643/1058
(60 %)
11 diff
(99.0 %id)
BI761325 pooled colon, kidney, stomach .a 343 to 990 1 to 648       648/648
(100 %)
1 diff
(99.9 %id)
TI_57147208   .a 343 to 990 36 to 683       648/683
(94 %)
7 diff
(99.0 %id)
BX389518 Placenta Cot 25-normalized .a 846 to 1756 1 to 906       906/906
(100 %)
15 diff
(98.4 %id)
AL570413 placenta, Placenta Cot 25-normalized .a 1033 to 2049 1014 to 1       1014/1014
(100 %)
10 diff
(99.1 %id)
BE465218 Kidney .a 1368 to 1912 545 to 1       545/545
(100 %)
0 diff
(100 %id)
NM_003058.3   .b 1 to 2512 1 to 2512 exact RefSeq,   2512/2512
(100 %)
0 diff
(100 %id)
X98333 Kidney .b 31 to 2245 1 to 2214 S270A tiling clone, AAA   2214/2214
(100 %)
7 diff
(99.7 %id)
AK290787 Kidney .b 97 to 1953 1 to 1857 S270A     1857/1857
(100 %)
3 diff
(99.9 %id)
BC039899 Colon, Kidney, Stomach, adult, whole pooled .b 120 to 2510 1 to 2388 S270A tiling clone, available from MGC, AAA   2388/2388
(100 %)
6 diff
(99.8 %id)
AW237399 Kidney .b 1943 to 2510 568 to 1       568/568
(100 %)
3 diff
(99.5 %id)
AI733710 Kidney .b 1967 to 2516 552 to 3       550/552
(99 %)
0 diff
(100 %id)
BF196028 Kidney .b 2004 to 2511 510 to 3       508/510
(99 %)
0 diff
(100 %id)
BE464249 Kidney .b 2036 to 2512 477 to 1   tiling clone,   477/477
(100 %)
0 diff
(100 %id)
AW242339 Kidney .b 2054 to 2512 459 to 1       459/459
(100 %)
16 diff
(96.6 %id)
AW058521 Kidney .b 2067 to 2511 446 to 1       446/446
(100 %)
6 diff
(98.7 %id)
AW779330 Kidney .b 2076 to 2512 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
AI207329 Kidney .b 2094 to 2516 425 to 3       423/425
(99 %)
0 diff
(100 %id)
BF476103 Kidney .b 2143 to 2512 372 to 1       372/372
(100 %)
4 diff
(99.0 %id)
DA625263 Kidney .c 1 to 549 2 to 551   tiling clone, capped   550/550
(100 %)
2 diff
(99.7 %id)
AB075951 Kidney .c 75 to 3757 1 to 3683 S270A P483L L484* tiling clone, AAA   3683/3683
(100 %)
13 diff
(99.7 %id)
BG427339 Kidney .c 78 to 214 1 to 137   available from MGC,   137/137
(100 %)
1 diff
(99.3 %id)
DA628457 Kidney .c 170 to 699 2 to 531   capped   530/530
(100 %)
3 diff
(99.5 %id)
DA623982 Kidney .c 171 to 691 2 to 523   capped   522/524
(99 %)
5 diff
(99.1 %id)
DA627710 Kidney .c 172 to 696 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA628634 Kidney .c 172 to 688 2 to 518   capped   517/518
(99 %)
2 diff
(99.7 %id)
DA630758 Kidney .c 172 to 747 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA632342 Kidney .c 172 to 734 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA632914 Kidney .c 172 to 742 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA622894 Kidney .c 176 to 761 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
DA633043 Kidney .c 176 to 748 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AA586426 synovial sarcoma .c 2057 to 2474 427 to 11   AAA   417/417
(100 %)
1 diff
(99.8 %id)
AI767306 Kidney .c 2716 to 3517 802 to 1       802/802
(100 %)
17 diff
(97.9 %id)
AI984333 Kidney .c 2817 to 3443 623 to 1       623/623
(100 %)
15 diff
(97.6 %id)
AI627509 Kidney .c 3099 to 3517 419 to 1       419/419
(100 %)
0 diff
(100 %id)
BE326996 Kidney .c 3138 to 3517 404 to 25   AAA   380/380
(100 %)
1 diff
(99.8 %id)
BX092360 Kidney .c 3165 to 3509 1 to 345   AAA   345/345
(100 %)
0 diff
(100 %id)
AI793077 Kidney .c 3165 to 3510 1 to 346       346/346
(100 %)
1 diff
(99.8 %id)
AI793252 Kidney .c 3198 to 3521 324 to 1       324/324
(100 %)
1 diff
(99.7 %id)
AI253257 Kidney .c 3205 to 3517 327 to 15   AAA   313/313
(100 %)
0 diff
(100 %id)
BF434956 Kidney .c 3245 to 3522 280 to 3       278/280
(99 %)
0 diff
(100 %id)
AI564091 Kidney .c 3285 to 3512 231 to 4       228/231
(98 %)
0 diff
(100 %id)
BC030978 Kidney .d 1 to 2230 1 to 2230 exact tiling clone, available from MGC, AAA   2230/2230
(100 %)
5 diff
(99.8 %id)
TI_1948233066   .d 169 to 428 133 to 392   fully sequenced,   260/283
(91 %)
5 diff
(98.3 %id)
TI_1948233369   .d 169 to 367 130 to 328   fully sequenced,   199/221
(90 %)
5 diff
(97.8 %id)
TI_1948233370   .d 337 to 902 697 to 127   fully sequenced,   571/697
(81 %)
7 diff
(99.0 %id)
TI_1948233067   .d 398 to 901 643 to 130   fully sequenced,   514/643
(79 %)
22 diff
(96.6 %id)
AI253100 Kidney .d 1200 to 1659 470 to 12   AAA   459/459
(100 %)
2 diff
(99.6 %id)
BX109288 2 pooled tumors (clear cell type), Kidney .d 1563 to 2048 1 to 486       486/486
(100 %)
2 diff
(99.6 %id)
BG899326 cartilage .d 1776 to 2297 604 to 83   tiling clone,   522/538
(97 %)
0 diff
(100 %id)
AA740263 2 pooled tumors (clear cell type), Kidney .d 1836 to 2235 406 to 10       397/406
(97 %)
0 diff
(100 %id)
AI306441 2 pooled tumors (clear cell type), Kidney .d 1863 to 2235 375 to 3       373/375
(99 %)
0 diff
(100 %id)
AA888183 2 pooled tumors (clear cell type), Kidney .d 1919 to 2232 315 to 3       313/315
(99 %)
0 diff
(100 %id)
AW300623 Kidney .e 1 to 628 630 to 3 L3M E8K F12M A21P L37V tiling clone,   628/630
(99 %)
7 diff
(98.9 %id)
BG206306   .f 138 to 620 495 to 15 exact tiling clone, Submitted on the opposite strand 650/756
(85 %)
25 diff
(96.7 %id)
BG213619   Gene SLC22A2, variant not shown         Submitted on the opposite strand    
AI565378 Kidney Gene SLC22A2, variant not shown         Suspected internal deletion, this clone was ignored    
BE048704 Kidney Gene SLC22A2, variant not shown         Suspected internal deletion, this clone was ignored    
DA631285 Kidney Gene SLC22A2, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI