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Gene SLC1A4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
557 supporting clones for gene SLC1A4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG773431 testis .a 1 to 628 1 to 627   tiling clone,   627/627
(100 %)
7 diff
(98.9 %id)
DB451527 testis .a 6 to 503 1 to 498   tiling clone,   498/498
(100 %)
5 diff
(99.0 %id)
DB178437 kidney, tumor tissue .a 315 to 826 2 to 515   capped   514/516
(99 %)
6 diff
(98.9 %id)
DA117202 cerebellum .a 339 to 884 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA214889 brain .a 339 to 792 2 to 455   capped   454/454
(100 %)
0 diff
(100 %id)
DC377255 brain .a 368 to 922 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DA234156 brain .a 369 to 621 2 to 254   capped   253/253
(100 %)
0 diff
(100 %id)
DA492906 brain .a 369 to 889 2 to 522   capped   521/521
(100 %)
1 diff
(99.9 %id)
DA714706   .a 369 to 840 2 to 474   capped   473/473
(100 %)
1 diff
(99.8 %id)
DA790478 brain .a 369 to 666 2 to 299   capped   298/298
(100 %)
0 diff
(100 %id)
DB176007 kidney, tumor tissue .a 369 to 721 2 to 354   capped   353/353
(100 %)
0 diff
(100 %id)
DB280718 uterus .a 369 to 824 2 to 456   capped   455/455
(100 %)
2 diff
(99.6 %id)
DC322741 brain .a 370 to 922 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
DA721377   .a 370 to 758 2 to 390   capped   389/389
(100 %)
0 diff
(100 %id)
DC377500 brain .a 371 to 917 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC378195   .a 371 to 939 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DA010043 adrenal gland .a 372 to 851 2 to 479   capped   478/478
(100 %)
5 diff
(99.0 %id)
DA213520 brain .a 372 to 813 2 to 444   capped   443/443
(100 %)
2 diff
(99.6 %id)
DA472608   .a 372 to 807 2 to 437   capped   436/436
(100 %)
1 diff
(99.8 %id)
DA505293 brain .a 372 to 822 2 to 453   capped   452/452
(100 %)
1 diff
(99.8 %id)
BI550462 brain, hippocampus .a 372 to 935 1 to 565       565/565
(100 %)
8 diff
(98.6 %id)
DC306828 cerebellum .a 373 to 907 1 to 535       535/535
(100 %)
0 diff
(100 %id)
BI553783 brain, hippocampus .a 373 to 1226 1 to 857       857/867
(98 %)
23 diff
(97.4 %id)
DC324280 brain .a 375 to 966 1 to 593       593/593
(100 %)
3 diff
(99.5 %id)
DB499781 hypothalamus .a 375 to 874 1 to 500       500/502
(99 %)
5 diff
(99.1 %id)
DC407326 thymus .a 375 to 928 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DA004624   .a 376 to 685 2 to 311   capped   310/310
(100 %)
3 diff
(99.1 %id)
DA726306   .a 376 to 649 2 to 275   capped   274/274
(100 %)
1 diff
(99.7 %id)
TI_44168128   .a 377 to 1226 127 to 978       852/988
(86 %)
12 diff
(98.8 %id)
TI_44169949   .a 377 to 935 94 to 653       560/653
(85 %)
6 diff
(99.1 %id)
NM_003038.4   .a 377 to 4975 1 to 4599 exact RefSeq, AAA   4599/4599
(100 %)
0 diff
(100 %id)
BP211898 cerebrum .a 381 to 962 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB468320 hippocampus .a 384 to 806 1 to 423       423/423
(100 %)
1 diff
(99.8 %id)
BX395265 Neuroblastoma Cot 50-normalized .a 393 to 1436 1 to 1037       1037/1048
(98 %)
23 diff
(97.9 %id)
DA534410 brain .a 394 to 758 2 to 366   capped   365/365
(100 %)
0 diff
(100 %id)
AU099019   .a 396 to 694 1 to 300       300/300
(100 %)
6 diff
(98.0 %id)
BP240867 Liver .a 396 to 966 1 to 572       572/572
(100 %)
6 diff
(99.0 %id)
DC410915 thymus .a 400 to 978 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC310876 cerebellum .a 402 to 998 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
DC324302 brain .a 402 to 928 1 to 526       526/526
(100 %)
5 diff
(99.1 %id)
DC343101 thalamus .a 402 to 949 1 to 548       548/548
(100 %)
0 diff
(100 %id)
DC325253 brain .a 403 to 988 1 to 586       586/586
(100 %)
3 diff
(99.5 %id)
DC423065 uterus .a 403 to 946 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
DA773843 brain .a 406 to 717 2 to 313   capped   312/312
(100 %)
1 diff
(99.7 %id)
BQ890056 dorsal root ganglia .a 407 to 1154 9 to 766       758/901
(84 %)
22 diff
(97.6 %id)
AU076694   .a 409 to 709 15 to 315       301/315
(95 %)
6 diff
(98.1 %id)
DC406572 thymus .a 410 to 979 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BP238558 Liver .a 411 to 1002 1 to 592       592/592
(100 %)
9 diff
(98.5 %id)
BP273567   .a 411 to 956 1 to 546       546/550
(99 %)
10 diff
(98.2 %id)
DA726608   .a 411 to 758 2 to 349   capped   348/348
(100 %)
0 diff
(100 %id)
DC321970 brain .a 412 to 981 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC321975 brain .a 412 to 969 1 to 558       558/558
(100 %)
2 diff
(99.7 %id)
DC324644 brain .a 412 to 978 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC325024 brain .a 412 to 992 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DC408929 thymus .a 412 to 935 1 to 524       524/524
(100 %)
0 diff
(100 %id)
AK313052 brain .a 413 to 2258 1 to 1846 T412A     1846/1846
(100 %)
6 diff
(99.7 %id)
DA119743 cerebellum .a 413 to 889 2 to 477   capped   476/476
(100 %)
4 diff
(99.2 %id)
DA212174 brain .a 413 to 791 2 to 380   capped   379/379
(100 %)
1 diff
(99.8 %id)
DA232897 brain .a 414 to 838 2 to 426   capped   425/425
(100 %)
3 diff
(99.3 %id)
CR990382 T-Lymphocytes .a 414 to 1261 1 to 851       851/852
(99 %)
4 diff
(99.6 %id)
DA010515 adrenal gland .a 415 to 652 2 to 240   capped   239/239
(100 %)
3 diff
(98.8 %id)
AK223486   .a 415 to 2299 1 to 1885 V399I T408S tiling clone,   1885/1885
(100 %)
2 diff
(99.9 %id)
DA324604 hippocampus .a 415 to 865 10 to 460   capped   451/459
(98 %)
6 diff
(98.7 %id)
DA327025 hippocampus .a 415 to 1044 2 to 633   capped   632/632
(100 %)
4 diff
(99.4 %id)
DA358194 subthalamic nucleus .a 415 to 685 2 to 273   capped   272/272
(100 %)
1 diff
(99.7 %id)
AU104047   .a 415 to 462 1 to 49       49/50
(98 %)
2 diff
(96.0 %id)
BP238593 Liver .a 415 to 1024 1 to 611       611/612
(99 %)
8 diff
(98.7 %id)
BP240610 Liver .a 415 to 975 1 to 561       561/561
(100 %)
9 diff
(98.4 %id)
BM822138 stomach .a 415 to 784 1 to 371       371/371
(100 %)
1 diff
(99.8 %id)
DA017526 adrenal gland .a 416 to 987 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA107219 cerebellum .a 416 to 951 2 to 538   capped   537/542
(99 %)
2 diff
(99.7 %id)
DA118024 cerebellum .a 416 to 973 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA191648 amygdala .a 416 to 1023 2 to 610   capped   609/609
(100 %)
2 diff
(99.7 %id)
DA204663 brain .a 416 to 953 2 to 539   capped   538/539
(99 %)
3 diff
(99.5 %id)
DA222276 brain .a 416 to 928 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA224151 brain .a 416 to 1003 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA225137 brain .a 416 to 973 2 to 559   capped   558/558
(100 %)
3 diff
(99.5 %id)
DA227113 brain .a 416 to 970 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA229394 brain .a 416 to 804 2 to 390   capped   389/389
(100 %)
3 diff
(99.3 %id)
DA233773 brain .a 416 to 885 2 to 472   capped   471/471
(100 %)
3 diff
(99.4 %id)
DA237359 brain .a 416 to 889 2 to 475   capped   474/474
(100 %)
3 diff
(99.4 %id)
DA238572 brain .a 416 to 935 2 to 522   capped   521/521
(100 %)
4 diff
(99.3 %id)
DA241762 brain .a 416 to 966 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA245550 brain .a 416 to 999 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DA460657 tongue, tumor tissue .a 416 to 758 2 to 344   capped   343/343
(100 %)
0 diff
(100 %id)
DA500379 brain .a 416 to 981 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA620573   .a 416 to 990 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA701857   .a 416 to 895 2 to 480   capped   479/479
(100 %)
1 diff
(99.8 %id)
DA788524 brain .a 416 to 703 2 to 289   capped   288/288
(100 %)
0 diff
(100 %id)
DA878061 Prostate .a 416 to 989 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA989085 synovial membrane tissue from rheumatioidarthritis .a 416 to 889 2 to 475   capped   474/481
(98 %)
3 diff
(99.4 %id)
DB081951 testis .a 416 to 885 2 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DB159976 thymus .a 416 to 986 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB163455 thymus .a 416 to 973 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB221640 trachea .a 416 to 889 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
DB260977 uterus .a 416 to 731 2 to 317   capped   316/316
(100 %)
1 diff
(99.7 %id)
DB291323 uterus .a 416 to 995 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
BC072423 Peripheral Nervous System, dorsal rootganglion .a 417 to 3956 1 to 3540 exact tiling clone, available from MGC, AAA   3540/3540
(100 %)
3 diff
(100.0 %id)
DA818689   .a 417 to 948 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
BX421795 T cells (Jurkat cell line) .a 422 to 1423 1 to 1009       892/1039
(85 %)
46 diff
(95.6 %id)
BQ440338 melanotic melanoma, skin .a 427 to 1292 1 to 864       864/893
(96 %)
25 diff
(97.3 %id)
BQ958364 carcinoma, cell line, Prostate .a 433 to 1232 1 to 808       808/968
(83 %)
16 diff
(98.4 %id)
DN994264 brain, whole brain .a 442 to 1116 19 to 693       675/693
(97 %)
6 diff
(99.2 %id)
BC026216 Lymph, lymphoma .a 476 to 4975 1 to 4520 exact tiling clone, available from MGC, AAA   4520/4520
(100 %)
20 diff
(99.6 %id)
L14595 brain motor cortex .a 476 to 2579 1 to 2102 G37R A117R V399I     2102/2102
(100 %)
6 diff
(99.8 %id)
L19444 hippocampus .a 495 to 2258 1 to 1761 S127T     1761/1761
(100 %)
8 diff
(99.6 %id)
BI261163 cervical carcinoma cell line, cervix .a 621 to 1320 32 to 741       710/741
(95 %)
19 diff
(97.5 %id)
AB026689   .a 639 to 2335 1 to 1697 P161S V184G     1697/1697
(100 %)
2 diff
(99.9 %id)
BI918900 brain .a 738 to 1130 261 to 679       604/681
(88 %)
41 diff
(94.0 %id)
TI_57241960   .a 738 to 1130 261 to 679       604/681
(88 %)
41 diff
(94.0 %id)
DB099612 testis .a 772 to 1339 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA337756 hippocampus .a 800 to 1380 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA639776 Liver .a 800 to 1301 2 to 503   capped   502/502
(100 %)
0 diff
(100 %id)
DA359580 subthalamic nucleus .a 802 to 1354 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA495472 brain .a 807 to 1374 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BJ994412 hepatoblastoma .a 846 to 1258 1 to 413       413/413
(100 %)
1 diff
(99.8 %id)
DA458733 tongue, tumor tissue .a 990 to 1556 2 to 569   capped   568/568
(100 %)
7 diff
(98.8 %id)
BP244182 Liver .a 1071 to 1643 1 to 574       574/574
(100 %)
4 diff
(99.4 %id)
CT001668 T-Lymphocytes .a 1089 to 1668 1 to 579       579/581
(99 %)
2 diff
(99.7 %id)
BP314328 mammary gland .a 1093 to 1673 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
DA123363 cerebellum .a 1113 to 1649 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
AL557980 T cells from T cell leukemia .a 1127 to 1806 1 to 681   fully sequenced,   681/681
(100 %)
3 diff
(99.6 %id)
CN338256 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1139 to 1853 17 to 730       714/730
(97 %)
9 diff
(98.8 %id)
DA109049 cerebellum .a 1169 to 1753 2 to 587   capped   586/586
(100 %)
8 diff
(98.7 %id)
DA502310 brain .a 1169 to 1654 2 to 488   capped   487/487
(100 %)
2 diff
(99.6 %id)
DA327790 hippocampus .a 1208 to 1769 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AW505412 lymph .a 1230 to 1585 1 to 356       356/356
(100 %)
5 diff
(98.6 %id)
TI_154161928   .a 1237 to 1796 71 to 630       560/560
(100 %)
4 diff
(99.3 %id)
BG679436 skin, squamous cell carcinoma .a 1314 to 2152 1 to 837       837/837
(100 %)
9 diff
(99.0 %id)
BG034378 breast, mammary adenocarcinoma, cell line .a 1319 to 2024 1 to 702       702/939
(74 %)
8 diff
(99.2 %id)
BF876157 lung_tumor .a 1325 to 1727 1 to 401       401/401
(100 %)
12 diff
(97.1 %id)
DA264639 caudate nucleus .a 1344 to 1916 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA436834 tongue, tumor tissue .a 1344 to 1927 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA905286   .a 1344 to 1901 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA246054 brain .a 1390 to 1931 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
DA818929   .a 1411 to 1963 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA134023 alzheimer cortex .a 1469 to 2039 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA457903 tongue, tumor tissue .a 1509 to 2075 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA021134   .a 1560 to 2080 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
BP242285 Liver .a 1565 to 2127 1 to 564       564/564
(100 %)
4 diff
(99.3 %id)
BQ053962 blood, natural killer cells, cell line .a 1569 to 2557 1 to 1016       1016/1082
(93 %)
54 diff
(95.1 %id)
BI197441 brain, neuroblastoma .a 1577 to 2063 1 to 502       502/1033
(48 %)
38 diff
(96.4 %id)
BG680370 skin, squamous cell carcinoma .a 1589 to 2229 1 to 640       640/643
(99 %)
5 diff
(99.3 %id)
BF932321 nervous_tumor .a 1604 to 1848 260 to 16     Submitted on the opposite strand 245/260
(94 %)
3 diff
(98.9 %id)
BE312712 brain, neuroblastoma .a 1605 to 2374 12 to 787       776/787
(98 %)
31 diff
(96.1 %id)
DA494686 brain .a 1606 to 2181 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA553192   .a 1607 to 2172 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA799175 brain .a 1608 to 2132 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA170498 amygdala .a 1610 to 2136 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
DA904245   .a 1612 to 2072 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DA186017 amygdala .a 1622 to 2142 10 to 530   capped   521/529
(98 %)
6 diff
(98.9 %id)
M85922   .a 1632 to 1965 1 to 333       333/337
(98 %)
2 diff
(99.5 %id)
BE895601 melanotic melanoma, skin .a 1645 to 2358 1 to 713       713/716
(99 %)
16 diff
(97.8 %id)
AL579907 T cells from T cell leukemia .a 1776 to 2619 844 to 1   fully sequenced,   844/844
(100 %)
8 diff
(99.1 %id)
BJ994413 hepatoblastoma .a 3531 to 3920 390 to 1       390/390
(100 %)
0 diff
(100 %id)
CR625932 T cells (Jurkat cell line) Cot10-normalized .b 1 to 1491 1 to 1491 exact tiling clone,   1491/1491
(100 %)
0 diff
(100 %id)
CD110522 Blood vessels - aorta, basilar and artery .c 1 to 696 1 to 706   tiling clone,   706/736
(95 %)
17 diff
(97.7 %id)
AK126636 cerebellum .c 256 to 6044 1 to 5789 exact tiling clone, available from FLJ,   5789/5789
(100 %)
4 diff
(100.0 %id)
DA098407 cerebellum .c 257 to 799 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
CD356838 Blood vessels - aorta, basilar and artery .c 339 to 1070 1 to 747       747/756
(98 %)
61 diff
(92.0 %id)
BX111113 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 503 to 979 1 to 477       477/478
(99 %)
1 diff
(99.8 %id)
BU076736 Pancreas, Purified pancreatic islet .c 541 to 1137 1 to 597       597/597
(100 %)
0 diff
(100 %id)
CK902455 Pancreas, Purified pancreatic islet .c 583 to 1096 1 to 514     Submitted on the opposite strand 514/514
(100 %)
0 diff
(100 %id)
CK902456 Pancreas, Purified pancreatic islet .c 748 to 1288 558 to 18     Submitted on the opposite strand 541/558
(96 %)
0 diff
(100 %id)
AI384071 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 749 to 1212 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
AI168787 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 862 to 1212 351 to 1       351/351
(100 %)
0 diff
(100 %id)
DB279184 uterus .c 1103 to 1687 2 to 587   tiling clone, capped   586/586
(100 %)
2 diff
(99.7 %id)
DB352372 uterus .c 4463 to 5026 564 to 1       564/564
(100 %)
0 diff
(100 %id)
NM_001193493.1   .d 1 to 3731 1 to 3731 exact RefSeq, AAA   3731/3731
(100 %)
0 diff
(100 %id)
AK295687 hippocampus .d 46 to 1262 1 to 1217 exact tiling clone,   1217/1217
(100 %)
1 diff
(100.0 %id)
DC333503 hippocampus .d 46 to 506 1 to 461       461/461
(100 %)
0 diff
(100 %id)
DC333508 hippocampus .d 46 to 508 1 to 463       463/463
(100 %)
0 diff
(100 %id)
BG901053 cartilage .d 62 to 366 86 to 389       304/321
(94 %)
6 diff
(98.2 %id)
BM043518 carcinoma, cell line, Prostate .d 466 to 1264 1 to 800       800/800
(100 %)
5 diff
(99.4 %id)
BM045867 carcinoma, cell line, Prostate .d 466 to 1000 1 to 537       537/539
(99 %)
5 diff
(99.1 %id)
BP301825   .d 475 to 1056 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP367436 thymus .d 482 to 1067 1 to 586       586/586
(100 %)
8 diff
(98.7 %id)
TI_57234893   .d 496 to 1371 66 to 943       878/945
(92 %)
20 diff
(97.9 %id)
BI909657 leukocyte .d 500 to 1371 1 to 874       874/876
(99 %)
10 diff
(98.9 %id)
DB101933 thymus .d 506 to 1050 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
AI751210 Bone, Hip .d 514 to 992 9 to 487       479/487
(98 %)
6 diff
(98.8 %id)
DB268103 uterus .d 522 to 1089 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
BE961078 melanotic melanoma, high MDR, skin .d 527 to 1151 1 to 628       628/628
(100 %)
42 diff
(93.4 %id)
BI222896 cervical carcinoma cell line, cervix .d 532 to 1242 1 to 714       714/714
(100 %)
15 diff
(97.9 %id)
DA901625   .d 611 to 1110 2 to 502   capped   501/501
(100 %)
1 diff
(99.9 %id)
BP238066 Liver .d 619 to 1220 1 to 601       601/601
(100 %)
5 diff
(99.2 %id)
DA558305   .d 620 to 1188 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA418419 thalamus .d 639 to 1196 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BF928275 nervous_tumor .d 674 to 1096 1 to 423       423/423
(100 %)
2 diff
(99.6 %id)
AU117468 whole embryo, mainly head .d 674 to 1367 2 to 695   capped   694/705
(98 %)
3 diff
(99.6 %id)
BM564840 eye, retinoblastoma .d 726 to 1528 1 to 810       810/1024
(79 %)
21 diff
(98.0 %id)
BE544758 cervical carcinoma cell line, cervix .d 742 to 1512 1 to 772       772/885
(87 %)
29 diff
(96.8 %id)
BQ447681 Knee, Osteoarthritic Cartilage .d 754 to 1403 669 to 19   AAA   651/651
(100 %)
1 diff
(99.9 %id)
BG056437 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .d 781 to 1370 596 to 9       588/635
(92 %)
0 diff
(100 %id)
T27916 eye .d 788 to 1045 1 to 258       258/258
(100 %)
1 diff
(99.7 %id)
AW950075   .d 789 to 1404 1 to 616       616/616
(100 %)
2 diff
(99.7 %id)
BQ447792 Knee, Osteoarthritic Cartilage .d 800 to 1403 622 to 19   AAA   604/604
(100 %)
2 diff
(99.7 %id)
BP211371 cerebrum .d 824 to 1400 1 to 577       577/577
(100 %)
3 diff
(99.5 %id)
BE090296 breast .d 851 to 1494 35 to 671       637/674
(94 %)
18 diff
(97.4 %id)
CN338253 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 852 to 1288 17 to 453       437/453
(96 %)
6 diff
(98.7 %id)
BE879369 large cell carcinoma, undifferentiated, lung .d 853 to 1614 1 to 755       755/916
(82 %)
22 diff
(97.6 %id)
DB516994 testis .d 858 to 1319 1 to 463     Submitted on the opposite strand 463/463
(100 %)
4 diff
(99.2 %id)
DA522770 brain .d 863 to 1389 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
BU623512 cell lines, Enchondroma .d 864 to 1475 630 to 19   AAA   612/612
(100 %)
2 diff
(99.7 %id)
BM475919 eye, retinoblastoma .d 869 to 1896 18 to 1055       1038/1055
(98 %)
6 diff
(99.5 %id)
AI131128 heart .d 874 to 1370 498 to 2       497/498
(99 %)
0 diff
(100 %id)
DB570919 hypothalamus .d 914 to 1375 1 to 462     Submitted on the opposite strand 462/462
(100 %)
2 diff
(99.6 %id)
CR621750 B cells (Ramos cell line) Cot 25-normalized .d 929 to 2682 1 to 1754   tiling clone,   1754/1754
(100 %)
0 diff
(100 %id)
BX367252   .d 929 to 1812 1 to 876   fully sequenced,   876/876
(100 %)
1 diff
(99.9 %id)
BP387166 pancreatic islet .d 932 to 1314 1 to 383     Submitted on the opposite strand 383/386
(99 %)
2 diff
(99.5 %id)
DB535570 hippocampus .d 938 to 1377 1 to 439     Submitted on the opposite strand 439/439
(100 %)
2 diff
(99.6 %id)
TI_153988213   .d 961 to 1370 510 to 101   AAA   410/410
(100 %)
0 diff
(100 %id)
AU132826   .d 987 to 1808 2 to 826   capped   825/825
(100 %)
8 diff
(99.1 %id)
AL119644 amygdala .d 988 to 1418 1 to 431       431/431
(100 %)
0 diff
(100 %id)
BF762130 colon_est .d 992 to 1251 1 to 259       259/269
(96 %)
11 diff
(96.0 %id)
BG532551 embryonal carcinoma, testis .d 999 to 1672 1 to 676       676/676
(100 %)
7 diff
(99.0 %id)
BP391610 pancreatic islet .d 1000 to 1314 1 to 315     Submitted on the opposite strand 315/316
(99 %)
4 diff
(98.8 %id)
BQ950507 large cell carcinoma, lung .d 1057 to 1985 1 to 931       931/937
(99 %)
20 diff
(97.9 %id)
AW893311 nervous_normal .d 1060 to 1476 417 to 1       417/417
(100 %)
0 diff
(100 %id)
CN338257 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 1086 to 1595 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DB199976 trachea .d 1105 to 1672 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BM475491 eye, retinoblastoma .d 1121 to 1916 1 to 811       811/1070
(75 %)
22 diff
(98.0 %id)
DA701520   .d 1141 to 1652 2 to 513   capped   512/512
(100 %)
0 diff
(100 %id)
DA011944 adrenal gland .d 1154 to 1701 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA050927   .d 1155 to 1729 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BF437648 Prostate .d 1258 to 1472 215 to 1       215/215
(100 %)
10 diff
(95.4 %id)
AI097346 uterus .d 1266 to 1677 412 to 1       412/412
(100 %)
2 diff
(99.6 %id)
AW901120 nervous_normal .d 1271 to 1513 246 to 4       243/246
(98 %)
0 diff
(100 %id)
BF811099 colon_ins .d 1301 to 1411 1 to 111       111/111
(100 %)
0 diff
(100 %id)
DA514358 brain .d 1324 to 1875 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BF914876 uterus_tumor .d 1364 to 1555 192 to 1     Submitted on the opposite strand 192/192
(100 %)
0 diff
(100 %id)
BP293468 lung .d 1386 to 1970 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
BP293650 lung .d 1386 to 1967 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP360316 thalamus .d 1389 to 1968 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
BP360346 thalamus .d 1389 to 1968 1 to 580       580/582
(99 %)
9 diff
(98.5 %id)
BF897622 marrow .d 1392 to 1681 1 to 287       287/295
(97 %)
6 diff
(98.0 %id)
BG980644 colon_normal .d 1394 to 1692 301 to 1       301/301
(100 %)
8 diff
(97.4 %id)
DA502623 brain .d 1400 to 1967 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA792792 brain .d 1418 to 1962 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
H08334 whole brain .d 1422 to 1966 1 to 543       543/543
(100 %)
13 diff
(97.7 %id)
BP432044   .d 1444 to 1778 19 to 354       336/354
(94 %)
6 diff
(98.4 %id)
R14012 whole brain .d 1448 to 1831 1 to 389       389/389
(100 %)
6 diff
(98.5 %id)
R56186 whole brain .d 1448 to 1890 1 to 445       445/445
(100 %)
9 diff
(98.0 %id)
R55913 whole brain .d 1448 to 1891 1 to 454       454/477
(95 %)
15 diff
(96.9 %id)
N41953 melanocyte .d 1450 to 1795 1 to 346       346/346
(100 %)
0 diff
(100 %id)
CB155269 brain .d 1454 to 2009 1 to 554       554/554
(100 %)
2 diff
(99.7 %id)
BP253134 Kidney .d 1462 to 2045 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
BP335460 coronary artery .d 1473 to 2059 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DA051910   .d 1521 to 2114 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
DA597691   .d 1524 to 2079 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
BG502266 embryonal carcinoma, testis .d 1525 to 2324 1 to 820       820/821
(99 %)
33 diff
(96.0 %id)
BF932871 nervous_tumor .d 1571 to 1904 334 to 2     Submitted on the opposite strand 333/334
(99 %)
0 diff
(100 %id)
BF933343 nervous_tumor .d 1571 to 1904 334 to 2     Submitted on the opposite strand 333/334
(99 %)
0 diff
(100 %id)
BI018121 marrow .d 1571 to 1937 366 to 3       364/366
(99 %)
0 diff
(100 %id)
CB159799 Liver .d 1576 to 2083 1 to 508       508/508
(100 %)
0 diff
(100 %id)
AV683504 hepatocellular carcinoma .d 1577 to 2000 1 to 419       419/420
(99 %)
5 diff
(98.9 %id)
BG314777   .d 1581 to 1869 1 to 293       293/293
(100 %)
8 diff
(97.3 %id)
BF932853 nervous_tumor .d 1603 to 1938 1 to 337       337/351
(96 %)
9 diff
(97.5 %id)
BF933325 nervous_tumor .d 1603 to 1938 1 to 337       337/351
(96 %)
9 diff
(97.5 %id)
AW868934 stomach_normal .d 1626 to 2024 431 to 35       397/435
(91 %)
0 diff
(100 %id)
BQ684650 melanotic melanoma, cell line, skin .d 1657 to 2053 25 to 421       397/421
(94 %)
0 diff
(100 %id)
BQ676055 melanotic melanoma, cell line, skin .d 1657 to 2043 23 to 409   AAA   387/428
(90 %)
3 diff
(99.3 %id)
BU190401 melanotic melanoma, cell line, skin .d 1658 to 2053 1 to 396       396/397
(99 %)
6 diff
(98.5 %id)
BU155261 melanotic melanoma, cell line, skin .d 1658 to 2046 1 to 389       389/398
(97 %)
3 diff
(99.3 %id)
BQ679639 melanotic melanoma, cell line, skin .d 1658 to 2052 1 to 396       396/397
(99 %)
2 diff
(99.5 %id)
DA263935 caudate nucleus .d 1665 to 2185 2 to 523   capped   522/522
(100 %)
4 diff
(99.3 %id)
BF376945 testis_normal .d 1672 to 2019 1 to 349       349/353
(98 %)
10 diff
(97.2 %id)
AV703420 adrenal gland .d 1693 to 2359 6 to 673       668/675
(98 %)
9 diff
(98.7 %id)
T75578 liver and spleen .d 1718 to 1997 1 to 280       280/281
(99 %)
6 diff
(97.9 %id)
H65047 liver and spleen .d 1718 to 2091 1 to 377       377/378
(99 %)
10 diff
(97.4 %id)
H90385 liver and spleen .d 1718 to 2132 1 to 423       423/424
(99 %)
17 diff
(96.0 %id)
BQ055156 lymph, lymphoma, cell line .d 1726 to 2626 22 to 921       900/1070
(84 %)
6 diff
(99.5 %id)
CN338254 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 1727 to 2333 1 to 607       607/607
(100 %)
4 diff
(99.4 %id)
BI261497 lymph, lymphoma, cell line .d 1729 to 2444 1 to 714       714/1092
(65 %)
23 diff
(97.9 %id)
BQ062393 lymph, lymphoma, cell line .d 1729 to 2700 1 to 1002       1002/1026
(97 %)
15 diff
(98.6 %id)
BQ054939 lymph, lymphoma, cell line .d 1731 to 2627 1 to 919       919/1073
(85 %)
10 diff
(99.1 %id)
BQ056703 lymph, lymphoma, cell line .d 1731 to 2631 1 to 934       934/1005
(92 %)
36 diff
(96.5 %id)
BQ057830 lymph, lymphoma, cell line .d 1731 to 2627 1 to 928       928/1000
(92 %)
8 diff
(99.2 %id)
BQ057973 lymph, lymphoma, cell line .d 1731 to 2750 1 to 1049       1049/1049
(100 %)
29 diff
(97.3 %id)
BQ057975 lymph, lymphoma, cell line .d 1731 to 2713 1 to 1014       1014/1014
(100 %)
28 diff
(97.3 %id)
BQ059022 lymph, lymphoma, cell line .d 1731 to 2446 1 to 719       719/1094
(65 %)
13 diff
(98.9 %id)
BQ059378 lymph, lymphoma, cell line .d 1731 to 2623 1 to 927       927/957
(96 %)
7 diff
(99.3 %id)
BQ060987 lymph, lymphoma, cell line .d 1731 to 2607 1 to 906       906/955
(94 %)
7 diff
(99.3 %id)
BQ061696 lymph, lymphoma, cell line .d 1731 to 2696 1 to 989       989/1009
(98 %)
8 diff
(99.3 %id)
BQ065716 lymph, lymphoma, cell line .d 1731 to 2676 1 to 982       982/993
(98 %)
28 diff
(97.2 %id)
BQ066795 lymph, lymphoma, cell line .d 1731 to 2728 1 to 1029       1029/1029
(100 %)
31 diff
(97.0 %id)
BQ643322 lymph, lymphoma, cell line .d 1731 to 2436 1 to 708       708/905
(78 %)
4 diff
(99.6 %id)
BQ883271 lymph, lymphoma, cell line .d 1731 to 2436 1 to 706       706/871
(81 %)
1 diff
(99.9 %id)
BQ642598 lymph, lymphoma, cell line .d 1731 to 2607 1 to 900       900/902
(99 %)
7 diff
(99.3 %id)
DA014926 adrenal gland .d 1759 to 2338 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
AA485582 lung .d 1777 to 2073 1 to 295       295/295
(100 %)
4 diff
(98.7 %id)
BX367251   .d 1782 to 2682 892 to 1   fully sequenced,   892/892
(100 %)
6 diff
(99.4 %id)
BU941231 mixed (pool of 40 RNAs) .d 1788 to 2593 1 to 816       816/825
(98 %)
16 diff
(98.1 %id)
CB121011 Liver .d 1788 to 2166 1 to 379       379/379
(100 %)
0 diff
(100 %id)
AA568184 colon, colon tumor RER+ .d 1800 to 2144 342 to 2       341/342
(99 %)
0 diff
(100 %id)
FN106811 breast carcinoma .d 1801 to 1906 1 to 106       106/109
(97 %)
5 diff
(95.5 %id)
DA575276   .d 1838 to 2411 2 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA007983   .d 1865 to 2404 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BC007350 Skin, melanotic melanoma. .d 1865 to 2713 1 to 849   available from MGC, AAA   849/849
(100 %)
0 diff
(100 %id)
BE383873 melanotic melanoma, skin .d 1884 to 2585 1 to 714   available from MGC,   714/832
(85 %)
18 diff
(97.9 %id)
CD513889 brain, Pituitary .d 1887 to 2750 1 to 870       870/886
(98 %)
9 diff
(99.0 %id)
CB153934 brain .d 1921 to 2501 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AL711189 human skeletal muscle .d 1949 to 2456 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
TI_154041782   .d 1957 to 2710 880 to 117   AAA   764/943
(81 %)
15 diff
(98.5 %id)
DA080104 cerebellum .d 1959 to 2524 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BF818472 colon_ins .d 1967 to 2397 429 to 1     Submitted on the opposite strand 429/430
(99 %)
10 diff
(97.7 %id)
TI_154016463   .d 1968 to 2713 841 to 84   AAA   758/928
(81 %)
6 diff
(99.4 %id)
FN148822 breast carcinoma .d 1970 to 2086 115 to 1     Submitted on the opposite strand 115/115
(100 %)
2 diff
(98.3 %id)
BQ440576 melanotic melanoma, skin .d 1991 to 2848 5 to 893       889/893
(99 %)
60 diff
(93.3 %id)
BQ183595 Knee, Osteoarthritic Cartilage .d 1996 to 2713 735 to 19   AAA   717/717
(100 %)
2 diff
(99.8 %id)
BX446275 placenta .d 2000 to 3145 1 to 1137   AAA   1137/1137
(100 %)
19 diff
(98.4 %id)
BQ181988 Knee, Osteoarthritic Cartilage .d 2020 to 2713 710 to 19   AAA   692/692
(100 %)
4 diff
(99.5 %id)
BU631296 cell lines, Chondrosarcoma .d 2033 to 2713 716 to 19   AAA   698/698
(100 %)
18 diff
(97.5 %id)
CN338255 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 2037 to 2698 1 to 681       681/681
(100 %)
18 diff
(97.4 %id)
FN060800 breast carcinoma .d 2041 to 2148 107 to 1     Submitted on the opposite strand 107/108
(99 %)
1 diff
(99.1 %id)
AW370595 breast .d 2045 to 2489 444 to 1       444/456
(97 %)
3 diff
(99.4 %id)
AW370610 breast .d 2045 to 2660 630 to 16       615/632
(97 %)
6 diff
(99.1 %id)
AW370648 breast .d 2045 to 2646 609 to 2       608/617
(98 %)
0 diff
(100 %id)
AW370651 breast .d 2045 to 2672 631 to 5       627/645
(97 %)
0 diff
(100 %id)
TI_151809410   .d 2045 to 2713 79 to 747   AAA   669/669
(100 %)
4 diff
(99.5 %id)
BF340083 brain, glioblastoma with EGFR amplification .d 2048 to 2819 7 to 784       778/796
(97 %)
14 diff
(98.3 %id)
BQ184070 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2048 to 2713 684 to 19   AAA   666/666
(100 %)
3 diff
(99.6 %id)
CA503211 Human Lung Epithelial cells, lung .d 2051 to 2713 699 to 19   AAA   681/684
(99 %)
6 diff
(99.2 %id)
BU617845 cell lines, Chondrosarcoma .d 2075 to 2713 675 to 19   AAA   657/657
(100 %)
17 diff
(97.5 %id)
AW370581 breast .d 2089 to 2680 11 to 602       592/602
(98 %)
6 diff
(99.1 %id)
AW327973 Burkitt lymphoma, lymph .d 2089 to 2624 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
CA423956 cell lines, Chondrosarcoma .d 2094 to 2713 656 to 19   AAA   638/638
(100 %)
17 diff
(97.4 %id)
BX455740 B cells (Ramos cell line) .d 2096 to 2710 612 to 1       612/717
(85 %)
18 diff
(97.5 %id)
BG314659   .d 2098 to 2205 111 to 3       109/112
(97 %)
0 diff
(100 %id)
BP334507 salivary gland .d 2101 to 2665 1 to 583       583/583
(100 %)
17 diff
(97.1 %id)
Z20199   .d 2113 to 2391 1 to 273       273/273
(100 %)
19 diff
(93.1 %id)
BG744385 blood, natural killer cells, cell line .d 2119 to 2913 1 to 798   fully sequenced,   798/798
(100 %)
12 diff
(98.5 %id)
CA437220 lung, Metastatic Chondrosarcoma .d 2122 to 2713 628 to 19   AAA   610/610
(100 %)
19 diff
(96.9 %id)
BP254661 Kidney .d 2126 to 2704 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
DA197098 alzheimer cortex .d 2127 to 2647 2 to 523   capped   522/522
(100 %)
1 diff
(99.9 %id)
FN122708 breast carcinoma .d 2153 to 2250 1 to 98       98/98
(100 %)
2 diff
(98.0 %id)
DB355275 whole embryo, mainly head .d 2158 to 2713 553 to 1       553/553
(100 %)
7 diff
(98.8 %id)
BE706399 head_neck .d 2159 to 2609 1 to 471       471/473
(99 %)
17 diff
(96.5 %id)
H09691 whole brain .d 2167 to 2555 1 to 394       394/403
(97 %)
8 diff
(98.1 %id)
BQ331651 lung_tumor .d 2173 to 2626 1 to 459       459/463
(99 %)
29 diff
(93.8 %id)
R18159 whole brain .d 2177 to 2635 1 to 467       467/472
(98 %)
12 diff
(97.5 %id)
BC001618.
matches multiple genes
Burkitt lymphoma, lymph, Lymph, Burkitt lymphoma .d 2182 to 3731 2165 to 3714   tiling clone, AAA also hits gene NDUFAB1 1550/3714
(41 %)
6 diff
(99.9 %id)
AA978353 2 pooled tumors (clear cell type), Kidney .d 2189 to 2713 545 to 21   AAA   525/525
(100 %)
0 diff
(100 %id)
BG988670 head_neck .d 2193 to 2640 8 to 456       449/556
(80 %)
6 diff
(99.0 %id)
BG760793 melanotic melanoma, high MDR (cell line), skin .d 2193 to 3138 1 to 936       936/962
(97 %)
37 diff
(96.2 %id)
BG761999 melanotic melanoma, high MDR (cell line), skin .d 2193 to 3013 1 to 824       824/825
(99 %)
13 diff
(98.5 %id)
BG762422 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2923 1 to 740       740/886
(83 %)
19 diff
(97.9 %id)
BG770572 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2898 1 to 704       704/704
(100 %)
8 diff
(98.9 %id)
BG764907 melanotic melanoma, high MDR (cell line), skin .d 2193 to 3062 1 to 871       871/874
(99 %)
12 diff
(98.7 %id)
BG766159 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2876 1 to 693       693/1081
(64 %)
15 diff
(98.7 %id)
BG766029 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2806 1 to 613       613/623
(98 %)
3 diff
(99.6 %id)
BG766753 melanotic melanoma, high MDR (cell line), skin .d 2193 to 3080 1 to 896       896/989
(90 %)
38 diff
(96.2 %id)
BG766894 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2961 1 to 785       785/943
(83 %)
44 diff
(95.4 %id)
BG769509 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2965 1 to 789       789/943
(83 %)
27 diff
(97.2 %id)
BG769338 melanotic melanoma, high MDR (cell line), skin .d 2193 to 3013 1 to 830       830/830
(100 %)
27 diff
(96.8 %id)
BG768167 melanotic melanoma, high MDR (cell line), skin .d 2193 to 2949 1 to 761       761/919
(82 %)
22 diff
(97.7 %id)
AI889380 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 2195 to 2703 509 to 1       509/509
(100 %)
0 diff
(100 %id)
BM690849 eye, Retina Foveal and Macular .d 2202 to 2714 1 to 513       513/513
(100 %)
6 diff
(98.9 %id)
BF229885 colon_est .d 2204 to 2470 269 to 2       268/287
(93 %)
0 diff
(100 %id)
R20601 whole brain .d 2207 to 2623 1 to 427       427/430
(99 %)
15 diff
(96.6 %id)
AA868504   .d 2207 to 2710 507 to 4       504/507
(99 %)
0 diff
(100 %id)
AW612968 colon, moderately-differentiated adenocarcinoma .d 2208 to 2714 507 to 1       507/507
(100 %)
0 diff
(100 %id)
BP384144 pancreatic islet .d 2209 to 2704 1 to 497     Submitted on the opposite strand 497/501
(99 %)
2 diff
(99.7 %id)
CB156097 Liver .d 2211 to 2714 523 to 18     Submitted on the opposite strand 506/524
(96 %)
0 diff
(100 %id)
AA630644   .d 2219 to 2709 493 to 3       491/493
(99 %)
0 diff
(100 %id)
AI751211 Bone, Hip .d 2232 to 2683 462 to 11       452/462
(97 %)
0 diff
(100 %id)
AA485419 lung .d 2243 to 2714 480 to 4       477/480
(99 %)
0 diff
(100 %id)
R56075 whole brain .d 2249 to 2709 505 to 21   AAA   485/492
(98 %)
30 diff
(94.0 %id)
BP379274 uterus .d 2250 to 2804 1 to 555       555/555
(100 %)
0 diff
(100 %id)
TI_151756379   .d 2259 to 2703 530 to 85   AAA   446/923
(48 %)
8 diff
(99.2 %id)
AI394506 brain, glioblastoma (pooled) .d 2261 to 2714 454 to 1       454/454
(100 %)
0 diff
(100 %id)
N33238 melanocyte .d 2262 to 2713 456 to 1       456/456
(100 %)
6 diff
(98.7 %id)
H08237 whole brain .d 2264 to 2702 480 to 27       454/480
(94 %)
0 diff
(100 %id)
AW402425 lymph .d 2264 to 2792 1 to 529       529/529
(100 %)
2 diff
(99.7 %id)
TI_154138797   .d 2264 to 2813 62 to 611       550/611
(90 %)
6 diff
(99.1 %id)
BM728294 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2266 to 2691 1 to 427       427/427
(100 %)
3 diff
(99.3 %id)
AA747849 pooled germ cell tumors .d 2270 to 2713 445 to 2       444/445
(99 %)
0 diff
(100 %id)
AA649647 alveolar rhabdomyosarcoma .d 2271 to 2652 1 to 382       382/382
(100 %)
5 diff
(98.7 %id)
AI205008 schizophrenic brain S-11 frontal lobe .d 2272 to 2698 452 to 8       445/452
(98 %)
0 diff
(100 %id)
BF439296 pooled .d 2274 to 2708 453 to 1       453/453
(100 %)
17 diff
(96.3 %id)
DB529777 hippocampus .d 2284 to 2711 1 to 426     Submitted on the opposite strand 426/428
(99 %)
12 diff
(97.2 %id)
DB509547 testis .d 2293 to 2714 1 to 424     Submitted on the opposite strand 424/427
(99 %)
18 diff
(95.8 %id)
H91292 liver and spleen .d 2299 to 2707 414 to 1       414/414
(100 %)
6 diff
(98.6 %id)
AI363198 anaplastic oligodendroglioma, brain .d 2302 to 2703 439 to 20   AAA   420/420
(100 %)
21 diff
(95.0 %id)
AI674925 adenocarcinoma, Pancreas .d 2311 to 2713 448 to 28   AAA   421/421
(100 %)
21 diff
(95.1 %id)
BP431625   .d 2311 to 2691 1 to 381       381/381
(100 %)
4 diff
(99.0 %id)
AA598625   .d 2312 to 2704 412 to 2       411/412
(99 %)
0 diff
(100 %id)
H65048 liver and spleen .d 2313 to 2701 399 to 1       399/402
(99 %)
11 diff
(97.3 %id)
BF477185 brain, glioblastoma (pooled) .d 2326 to 2706 391 to 11   AAA   381/381
(100 %)
3 diff
(99.3 %id)
AI750216 Bone, Hip .d 2328 to 2683 366 to 11       356/366
(97 %)
0 diff
(100 %id)
BG698803 skin .d 2329 to 3143 1 to 817       817/820
(99 %)
6 diff
(99.3 %id)
AI015026   .d 2342 to 2707 390 to 7       384/390
(98 %)
0 diff
(100 %id)
FN175355 breast carcinoma .d 2345 to 2444 113 to 15     Submitted on the opposite strand 99/113
(87 %)
6 diff
(94.7 %id)
W76347 heart .d 2358 to 2829 1 to 490       490/490
(100 %)
10 diff
(98.0 %id)
CF243123 Brain glioblastoma .d 2360 to 3097 1 to 772       772/888
(86 %)
7 diff
(99.3 %id)
R39135 whole brain .d 2361 to 2709 370 to 22   AAA   349/349
(100 %)
0 diff
(100 %id)
BM928417 brain .d 2361 to 3377 1 to 1018       1018/1018
(100 %)
24 diff
(97.7 %id)
AA025671 heart .d 2363 to 2713 356 to 1       356/356
(100 %)
5 diff
(98.6 %id)
CA428496 cell lines, Chondrosarcoma .d 2367 to 2713 384 to 20       365/384
(95 %)
0 diff
(100 %id)
BQ188053 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2382 to 2703 1 to 322   AAA   322/322
(100 %)
0 diff
(100 %id)
T50662 fetal spleen, Spleen .d 2383 to 2713 338 to 1       338/455
(74 %)
9 diff
(98.1 %id)
W36278 cerebrum and cerebellum .d 2386 to 2697 1 to 312       312/312
(100 %)
1 diff
(99.7 %id)
AW628428 2 pooled high-grade transitional celltumors, genitourinary tract .d 2396 to 2713 336 to 1       336/336
(100 %)
17 diff
(95.0 %id)
BG032165 breast, mammary adenocarcinoma, cell line .d 2427 to 3134 1 to 712       712/1122
(63 %)
13 diff
(98.9 %id)
N26980 melanocyte .d 2437 to 2884 1 to 452       452/459
(98 %)
7 diff
(98.5 %id)
AI368675 anaplastic oligodendroglioma, brain .d 2445 to 2703 278 to 20   AAA   259/259
(100 %)
6 diff
(97.7 %id)
AW079375 colon, moderately differentiated adenocarcinoma .d 2445 to 2713 294 to 26   AAA   269/269
(100 %)
2 diff
(99.3 %id)
AW612240 carcinoid, lung .d 2445 to 2714 275 to 6       270/276
(97 %)
0 diff
(100 %id)
FN126797 breast carcinoma .d 2446 to 2541 98 to 1     Submitted on the opposite strand 98/98
(100 %)
2 diff
(98.0 %id)
BF154926 breast .d 2452 to 2859 21 to 428       408/428
(95 %)
6 diff
(98.6 %id)
FN056430 breast carcinoma .d 2452 to 2516 1 to 65       65/65
(100 %)
0 diff
(100 %id)
AA505495 breast .d 2455 to 2712 258 to 1       258/258
(100 %)
0 diff
(100 %id)
BF154928 breast .d 2471 to 2870 1 to 398       398/398
(100 %)
7 diff
(98.3 %id)
T35363 brain .d 2475 to 2814 1 to 341       341/342
(99 %)
3 diff
(99.2 %id)
FN143747 breast carcinoma .d 2484 to 2581 96 to 1     Submitted on the opposite strand 96/96
(100 %)
2 diff
(98.0 %id)
BX110987 liver and spleen .d 2487 to 3154 1 to 668       668/668
(100 %)
1 diff
(99.9 %id)
FN129206 breast carcinoma .d 2488 to 2584 99 to 4     Submitted on the opposite strand 96/99
(96 %)
0 diff
(100 %id)
H75274 liver and spleen .d 2488 to 2876 1 to 396       396/447
(88 %)
14 diff
(96.9 %id)
AW815715 stomach .d 2493 to 2619 128 to 5       124/135
(91 %)
0 diff
(100 %id)
FN103966 breast carcinoma .d 2502 to 2603 101 to 1     Submitted on the opposite strand 101/101
(100 %)
1 diff
(99.1 %id)
AA515380 colon .d 2519 to 2703 185 to 1       185/185
(100 %)
1 diff
(99.5 %id)
FN054474 breast carcinoma .d 2522 to 2602 1 to 82       82/99
(82 %)
2 diff
(98.0 %id)
FN064800 breast carcinoma .d 2523 to 2625 1 to 106       106/106
(100 %)
4 diff
(96.3 %id)
R83581 liver and spleen .d 2536 to 2938 12 to 416       405/419
(96 %)
3 diff
(99.3 %id)
H24700 breast .d 2538 to 2870 1 to 334       334/336
(99 %)
4 diff
(98.9 %id)
H38871 liver and spleen .d 2543 to 2833 1 to 291       291/291
(100 %)
2 diff
(99.4 %id)
F05820 brain, total brain .d 2547 to 2855 1 to 309       309/309
(100 %)
0 diff
(100 %id)
F06366 brain, total brain .d 2547 to 2835 1 to 289       289/289
(100 %)
0 diff
(100 %id)
Z43187 brain, total brain .d 2547 to 2904 1 to 358       358/358
(100 %)
0 diff
(100 %id)
AA085026   .d 2549 to 2938 1 to 393       393/393
(100 %)
4 diff
(99.0 %id)
FN141445 breast carcinoma .d 2559 to 2630 71 to 1     Submitted on the opposite strand 71/72
(98 %)
1 diff
(98.7 %id)
AI681583 carcinoid, lung .d 2560 to 3050 490 to 1       490/490
(100 %)
1 diff
(99.8 %id)
AA991712 pooled germ cell tumors .d 2564 to 2713 150 to 1       150/150
(100 %)
2 diff
(98.7 %id)
EL954593 eyeball .d 2574 to 3172 22 to 620       599/620
(96 %)
6 diff
(99.1 %id)
FN046039 breast carcinoma .d 2585 to 2645 59 to 1     Submitted on the opposite strand 59/60
(98 %)
2 diff
(96.7 %id)
CK005239 brain/CNS, Human Brain - Frontal Cortex .d 2613 to 3286 1 to 675       675/675
(100 %)
4 diff
(99.5 %id)
FN051843 breast carcinoma .d 2620 to 2708 1 to 89       89/102
(87 %)
1 diff
(99.1 %id)
BQ014179 Chondrosarcoma, Left Pubic Bone .d 2621 to 3116 514 to 19   AAA   496/496
(100 %)
3 diff
(99.4 %id)
R27508 placenta .d 2628 to 2903 1 to 286       286/289
(98 %)
20 diff
(93.1 %id)
BF154930 breast .d 2656 to 2915 1 to 260       260/260
(100 %)
4 diff
(98.5 %id)
BM700940 eye, human retina .d 2657 to 3109 1 to 453   AAA   453/453
(100 %)
0 diff
(100 %id)
BI036679 nervous_tumor .d 2668 to 3023 31 to 386       356/386
(92 %)
6 diff
(98.5 %id)
BG034022 breast, mammary adenocarcinoma, cell line .d 2675 to 3493 1 to 814   AAA   814/814
(100 %)
21 diff
(97.5 %id)
FN087660 breast carcinoma .d 2790 to 2869 1 to 78       78/97
(80 %)
3 diff
(97.0 %id)
R05605 liver and spleen .d 2851 to 3210 1 to 372       372/372
(100 %)
9 diff
(97.6 %id)
BE268336 Burkitt lymphoma, lymph .d 2858 to 3507 19 to 676       658/676
(97 %)
6 diff
(99.2 %id)
BE297827 muscle, rhabdomyosarcoma .d 2858 to 3576 24 to 752       729/811
(89 %)
12 diff
(98.6 %id)
AW196056 adenocarcinoma, Pancreas .d 2861 to 3106 246 to 1       246/246
(100 %)
0 diff
(100 %id)
BE561680 Burkitt lymphoma, lymph .d 2861 to 3689 50 to 883       834/983
(84 %)
41 diff
(95.9 %id)
BE514272 Burkitt lymphoma, lymph .d 2863 to 3559 19 to 715       697/810
(86 %)
6 diff
(99.3 %id)
BG745031 blood, natural killer cells, cell line .d 2883 to 3667 814 to 18   fully sequenced,   797/814
(97 %)
16 diff
(98.1 %id)
BX452769 placenta .d 2906 to 3731 1 to 826       826/829
(99 %)
14 diff
(98.4 %id)
AA762025 germinal center B cell .d 2908 to 3105 236 to 39   AAA   198/198
(100 %)
1 diff
(99.5 %id)
TI_149301178   .d 2959 to 3731 857 to 94   AAA   764/907
(84 %)
42 diff
(95.4 %id)
BQ446476 Knee, Osteoarthritic Cartilage .d 2961 to 3731 786 to 19   AAA   768/768
(100 %)
4 diff
(99.5 %id)
R10786 liver and spleen .d 2981 to 3273 1 to 305       305/306
(99 %)
8 diff
(97.4 %id)
BQ025795 placenta .d 2986 to 3367 399 to 17   AAA   383/383
(100 %)
1 diff
(99.8 %id)
BQ340857 nervous_normal .d 2988 to 3275 305 to 11       295/309
(95 %)
0 diff
(100 %id)
CN484106 eye .d 2993 to 3562 1 to 570       570/570
(100 %)
0 diff
(100 %id)
N42959 melanocyte .d 2995 to 3400 1 to 417   fully sequenced,   417/417
(100 %)
12 diff
(97.2 %id)
AW405101 lymph .d 2995 to 3455 8 to 477       470/477
(98 %)
6 diff
(98.8 %id)
TI_154142234   .d 2995 to 3674 92 to 779       688/689
(99 %)
7 diff
(99.0 %id)
DB369823   .d 3059 to 3642 583 to 1       583/583
(100 %)
18 diff
(97.0 %id)
BQ448106 Knee, Osteoarthritic Cartilage .d 3059 to 3712 674 to 19   AAA   656/656
(100 %)
1 diff
(99.9 %id)
CB156219 brain .d 3109 to 3614 1 to 506       506/506
(100 %)
0 diff
(100 %id)
R25656 placenta .d 3116 to 3368 255 to 1       255/259
(98 %)
6 diff
(97.7 %id)
BE467428 carcinoid, lung .d 3132 to 3608 1 to 484     Submitted on the opposite strand 484/484
(100 %)
6 diff
(98.8 %id)
BQ447532 Knee, Osteoarthritic Cartilage .d 3150 to 3731 600 to 19   AAA   582/582
(100 %)
0 diff
(100 %id)
BM977103 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 3151 to 3731 598 to 19   AAA   580/580
(100 %)
5 diff
(99.2 %id)
BM014688 breast, mammary adenocarcinoma, cell line .d 3164 to 3642 1 to 486   AAA   486/486
(100 %)
14 diff
(97.2 %id)
TI_59392736   .d 3164 to 3642 58 to 543   AAA   486/486
(100 %)
14 diff
(97.2 %id)
BQ446903 Knee, Osteoarthritic Cartilage .d 3170 to 3731 581 to 19   AAA   563/572
(98 %)
1 diff
(99.9 %id)
AA372795 colon .d 3184 to 3409 1 to 226       226/226
(100 %)
2 diff
(99.2 %id)
AW954354   .d 3185 to 3731 1 to 547   AAA   547/547
(100 %)
1 diff
(99.9 %id)
DB318941   .d 3185 to 3731 547 to 1       547/547
(100 %)
0 diff
(100 %id)
AW381430 head_neck .d 3188 to 3502 313 to 1       313/326
(96 %)
10 diff
(97.0 %id)
BX392385 Neuroblastoma Cot 50-normalized .d 3206 to 3728 529 to 4       526/600
(87 %)
0 diff
(100 %id)
W72527 heart .d 3231 to 3733 507 to 1       507/510
(99 %)
11 diff
(97.9 %id)
AI458436 pooled .d 3236 to 3731 507 to 12   AAA   496/496
(100 %)
2 diff
(99.6 %id)
AW381426 head_neck .d 3237 to 3481 245 to 1       245/276
(88 %)
12 diff
(95.7 %id)
AW381445 head_neck .d 3240 to 3488 1 to 249       249/249
(100 %)
1 diff
(99.6 %id)
H99104 melanocyte .d 3265 to 3731 469 to 1       469/469
(100 %)
7 diff
(98.6 %id)
AA422022 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 3266 to 3730 1 to 464       464/464
(100 %)
4 diff
(99.2 %id)
BQ025904 placenta .d 3269 to 3731 481 to 19   AAA   463/463
(100 %)
2 diff
(99.6 %id)
AI307749 2 pooled tumors (clear cell type), Kidney .d 3272 to 3733 462 to 1       462/462
(100 %)
3 diff
(99.4 %id)
R05498 liver and spleen .d 3283 to 3729 458 to 1       458/458
(100 %)
19 diff
(95.9 %id)
AA084923   .d 3286 to 3726 444 to 1       444/445
(99 %)
6 diff
(98.7 %id)
AI680229 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .d 3287 to 3733 450 to 4       447/450
(99 %)
0 diff
(100 %id)
AI392890 B-cell, chronic lymphotic leukemia .d 3293 to 3731 448 to 10       439/448
(97 %)
0 diff
(100 %id)
AI458503 carcinoid, lung .d 3302 to 3731 430 to 1       430/430
(100 %)
0 diff
(100 %id)
H24701 breast .d 3303 to 3725 436 to 1       436/440
(99 %)
21 diff
(95.3 %id)
R41706 whole brain .d 3304 to 3705 422 to 13   AAA   410/412
(99 %)
13 diff
(96.9 %id)
BF511284   .d 3307 to 3731 442 to 18   AAA   425/426
(99 %)
5 diff
(98.9 %id)
AA668980 germinal center B cell .d 3358 to 3731 408 to 35   AAA   374/374
(100 %)
0 diff
(100 %id)
AA921905 pooled .d 3369 to 3731 363 to 1       363/363
(100 %)
4 diff
(98.9 %id)
N29907 melanocyte .d 3370 to 3731 363 to 1   fully sequenced,   363/363
(100 %)
2 diff
(99.5 %id)
Z39267 brain, total brain .d 3379 to 3731 353 to 1       353/353
(100 %)
0 diff
(100 %id)
C15150   .d 3387 to 3731 347 to 1       347/395
(87 %)
7 diff
(98.3 %id)
AA936377 pooled .d 3388 to 3733 350 to 4       347/350
(99 %)
0 diff
(100 %id)
AA904401 pooled .d 3389 to 3733 348 to 4       345/348
(99 %)
0 diff
(100 %id)
AI864179 pooled .d 3401 to 3731 353 to 23   AAA   331/331
(100 %)
12 diff
(96.4 %id)
AI470383 pooled .d 3427 to 3731 305 to 1       305/305
(100 %)
0 diff
(100 %id)
H75385 liver and spleen .d 3430 to 3726 306 to 3       304/306
(99 %)
0 diff
(100 %id)
FN061854 breast carcinoma .d 3445 to 3549 1 to 107       107/107
(100 %)
2 diff
(98.2 %id)
AI869213 anaplastic oligodendroglioma, brain .d 3447 to 3731 285 to 1       285/285
(100 %)
0 diff
(100 %id)
F02651 brain, total brain .d 3449 to 3731 283 to 1       283/283
(100 %)
1 diff
(99.7 %id)
R10696 liver and spleen .d 3470 to 3726 262 to 1       262/267
(98 %)
5 diff
(98.2 %id)
AW275373 Kidney .d 3477 to 3733 262 to 6       257/262
(98 %)
0 diff
(100 %id)
DB316693 brain .d 3535 to 3731 197 to 1       197/197
(100 %)
1 diff
(99.5 %id)
F02066 brain, total brain .d 3539 to 3731 193 to 1       193/193
(100 %)
0 diff
(100 %id)
H38800 liver and spleen .d 3551 to 3717 167 to 1       167/167
(100 %)
0 diff
(100 %id)
FN111455 breast carcinoma .d 3604 to 3692 1 to 87       87/87
(100 %)
2 diff
(97.8 %id)
FN060748 breast carcinoma .d 3660 to 3729 73 to 4     Submitted on the opposite strand 70/73
(95 %)
0 diff
(100 %id)
BQ231333 melanotic melanoma, skin .e 1 to 698 1 to 697 F169L S170V R171E D172T V174F ... tiling clone,   697/697
(100 %)
2 diff
(99.8 %id)
BI907534 leukocyte .f 1 to 856 1 to 868 E7D N8E N9Q G10W V11C ... tiling clone,   868/868
(100 %)
39 diff
(95.6 %id)
TI_57234107   .f 1 to 856 34 to 901 E7D N8E N9Q G10W V11C ...     868/901
(96 %)
43 diff
(95.3 %id)
DA450204 tongue, tumor tissue .f 33 to 591 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA481335   .f 51 to 599 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA186700 amygdala .g 1 to 560 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
BP291830 lung .g 48 to 629 1 to 582 G119X tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
AL833067 human spinal cord .h-u 1 to 5063 34 to 5095 exact tiling clone, available from DKFZ, AAA   5062/5095
(99 %)
6 diff
(99.9 %id)
DB308932 hippocampus .h-u 542 to 1024 1 to 483   tiling clone, Submitted on the opposite strand 483/483
(100 %)
7 diff
(98.6 %id)
DA128744 cerebellum .h-u 1284 to 1854 2 to 572   tiling clone, to resequence, capped   571/571
(100 %)
0 diff
(100 %id)
AI827654 pooled .h-u 2493 to 2964 484 to 14       471/484
(97 %)
0 diff
(100 %id)
AA994044 pooled .h-u 2567 to 2978 412 to 1   tiling clone,   412/412
(100 %)
1 diff
(99.8 %id)
DB112669 thymus .h-u 3302 to 3879 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DN989900 brain, whole brain .h-u 3890 to 4394 9 to 516 K7E R14K M28D S29E T30Y ... tiling clone,   508/516
(98 %)
6 diff
(98.9 %id)
AI570182 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h-u 4408 to 5066 654 to 1       654/654
(100 %)
8 diff
(98.8 %id)
AW079026 esophagus, squamous cell carcinoma .h-u 4474 to 4915 442 to 1       442/442
(100 %)
4 diff
(99.1 %id)
DB300978 cerebellum .h-u 4513 to 5063 551 to 1   to resequence,   551/551
(100 %)
1 diff
(99.9 %id)
DB343438 thymus .h-u 4527 to 5063 538 to 1       538/538
(100 %)
3 diff
(99.5 %id)
BX105446 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h-u 4593 to 5077 485 to 1     Submitted on the opposite strand 485/486
(99 %)
0 diff
(100 %id)
AW977720   .h-u 4690 to 5248 559 to 1   tiling clone, Submitted on the opposite strand 559/562
(99 %)
12 diff
(97.9 %id)
AA724708 pooled .h-u 4863 to 5249 388 to 1       388/388
(100 %)
2 diff
(99.5 %id)
AV707129 adrenal gland .h-u 4868 to 5063 1 to 197   AAA   197/197
(100 %)
1 diff
(99.5 %id)
AA827112 germinal center B cell .h-u 4927 to 5258 331 to 1       331/331
(100 %)
4 diff
(98.8 %id)
DA818235   .h-u 4933 to 5499 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
DB327737   .h-u 6274 to 6730 458 to 1   tiling clone,   458/458
(100 %)
1 diff
(99.8 %id)
DB143664 thymus .i-u 1 to 522 2 to 523   tiling clone, capped   522/522
(100 %)
2 diff
(99.7 %id)
DB345563 thymus .i-u 2909 to 3446 537 to 1   tiling clone,   537/537
(100 %)
1 diff
(99.9 %id)
DC422893 uterus .j 1 to 550 1 to 557 R24L G26R A27C R28C G29A ... tiling clone,   557/557
(100 %)
9 diff
(98.4 %id)
DC416828 trachea .j 3 to 571 1 to 567 exact tiling clone,   567/567
(100 %)
1 diff
(99.9 %id)
DB082167 testis .j 209 to 766 2 to 559   tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
T79500 liver and spleen .k-u 1 to 346 1 to 347 L7X L18X F32X tiling clone, fully sequenced,   347/347
(100 %)
2 diff
(99.5 %id)
T79414 liver and spleen .k-u 316 to 714 409 to 1   tiling clone, fully sequenced,   409/409
(100 %)
11 diff
(97.4 %id)
DA218921 brain .l 1 to 605 2 to 606 exact tiling clone, capped   605/605
(100 %)
1 diff
(99.9 %id)
DA493294 brain .l 1 to 585 2 to 586 exact capped   585/585
(100 %)
1 diff
(99.9 %id)
DA742790   .l 17 to 577 2 to 562 exact capped   561/561
(100 %)
2 diff
(99.7 %id)
DA519746 brain .l 23 to 576 2 to 555 K34E P35T V36C S37F L38P ... capped   554/559
(99 %)
3 diff
(99.5 %id)
DA111220 cerebellum .l 28 to 605 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
BP312871 mammary gland .l 32 to 611 1 to 582 exact     582/582
(100 %)
2 diff
(99.7 %id)
DA341726 substantia nigra .l 35 to 595 2 to 562 exact capped   561/561
(100 %)
1 diff
(99.9 %id)
DA532460 brain .l 35 to 636 2 to 604 exact tiling clone, capped   603/603
(100 %)
3 diff
(99.6 %id)
DB221548 trachea .l 35 to 558 2 to 525 exact capped   524/524
(100 %)
1 diff
(99.9 %id)
DA193360 amygdala .l 37 to 584 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DA227637 brain .l 37 to 601 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA323383 hippocampus .l 37 to 513 2 to 478 exact capped   477/477
(100 %)
0 diff
(100 %id)
DA400926 thalamus .l 37 to 600 2 to 565 exact capped   564/564
(100 %)
2 diff
(99.7 %id)
DA416070 thalamus .l 37 to 510 2 to 476 exact capped   475/475
(100 %)
2 diff
(99.6 %id)
DA698249   .l 37 to 561 2 to 526 K6M capped   525/525
(100 %)
1 diff
(99.9 %id)
DA723251   .l 37 to 612 2 to 577 exact capped   576/576
(100 %)
1 diff
(99.9 %id)
DA778557 brain .l 37 to 593 2 to 558 exact capped   557/557
(100 %)
1 diff
(99.9 %id)
DA917256 small intestine .l 37 to 605 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA989518 synovial membrane tissue from rheumatioidarthritis .l 37 to 578 2 to 543 exact capped   542/542
(100 %)
0 diff
(100 %id)
DA994958 synovial membrane tissue from rheumatioidarthritis .l 37 to 588 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DB234964 trachea .l 37 to 617 2 to 582 exact capped   581/581
(100 %)
2 diff
(99.7 %id)
DB235026 trachea .l 37 to 527 2 to 493 exact capped   492/492
(100 %)
1 diff
(99.8 %id)
DB238109 trachea .l 37 to 584 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DA956690 Spleen .l 44 to 581 2 to 539 exact capped   538/538
(100 %)
0 diff
(100 %id)
DB218759 trachea .l 44 to 513 2 to 473 A10S V12G R13A A14R V15G ... capped   472/472
(100 %)
2 diff
(99.6 %id)
DB230664 trachea .l 44 to 605 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DB291022 uterus .l 44 to 609 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DB130679 thymus .l 54 to 546 2 to 493 exact capped   492/495
(99 %)
5 diff
(99.0 %id)
DB209492 trachea .m 1 to 502 2 to 503 exact tiling clone, capped   502/502
(100 %)
0 diff
(100 %id)
BQ448065 Knee, Osteoarthritic Cartilage Gene SLC1A4, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BQ024585 placenta Gene SLC1A4, variant not shown         This clone was ignored    
CA437637 lung, Metastatic Chondrosarcoma Gene SLC1A4, variant not shown         This clone was ignored    
BM677709 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene SLC1A4, variant not shown         This clone was ignored    
BM725266 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene SLC1A4, variant not shown         This clone was ignored    
DC428352   Gene SLC1A4, variant not shown         Suspected internal deletion, this clone was ignored    
DB296060 bladder Gene SLC1A4, variant not shown         This clone was ignored    
DA043289 bladder Gene SLC1A4, variant not shown       capped This clone was ignored    
BI018403 marrow Gene SLC1A4, variant not shown              
AK315986 amygdala Gene SLC1A4, variant not shown         Suspected internal deletion, this clone was ignored    
CR743547   Gene SLC1A4, variant not shown         This clone was ignored    
DA763892 tongue Gene SLC1A4, variant not shown       capped Suspected internal deletion, this clone was ignored    
DC318528 amygdala Gene SLC1A4, variant not shown         Suspected internal deletion, this clone was ignored    
AK298472   Gene SLC1A4, variant not shown         Suspected internal deletion, this clone was ignored    
DC320700 brain Gene SLC1A4, variant not shown         Suspected internal deletion, this clone was ignored    
DA232354 brain Gene SLC1A4, variant not shown       capped Suspected internal deletion, this clone was ignored    
AW170459 cervix, tumor Gene SLC1A4, variant not shown         Suspected internal deletion, this clone was ignored    
AW204539   Gene SLC1A4, variant not shown         This clone was ignored    
BM997369 lung, Metastatic Chondrosarcoma Gene SLC1A4, variant not shown         This clone was ignored    
DA782026 brain Gene SLC1A4, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j, .k-u, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI