To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SLC17A8TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
24 supporting clones for gene SLC17A8 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK128319 thymus .a 1 to 3953 2 to 3952 exact tiling clone, available from FLJ,   3952/3952
(100 %)
1 diff
(100.0 %id)
NM_139319.2   .a 1 to 3982 2 to 3983 exact RefSeq,   3983/3983
(100 %)
0 diff
(100 %id)
NM_001145288.1   .b 1 to 3832 2 to 3833 exact RefSeq,   3833/3833
(100 %)
0 diff
(100 %id)
DB146254 thymus .b 1 to 536 2 to 537   tiling clone, capped   536/536
(100 %)
0 diff
(100 %id)
BC117229 Lung and heart, PCR rescued clones .b 289 to 2017 1 to 1729 exact     1729/1729
(100 %)
0 diff
(100 %id)
BC143396 Lung and heart, PCR rescued clones .b 289 to 2025 1 to 1737 exact tiling clone,   1737/1737
(100 %)
0 diff
(100 %id)
TI_2194575587   .b 289 to 1348 49 to 1102       1054/1227
(85 %)
16 diff
(98.7 %id)
TI_2194575590   .b 289 to 1345 48 to 1097       1050/1256
(83 %)
17 diff
(98.7 %id)
TI_2194576207   .b 289 to 1345 48 to 1097       1050/1260
(83 %)
14 diff
(98.9 %id)
TI_1320129525   .b 412 to 1241 170 to 993       824/824
(100 %)
7 diff
(99.2 %id)
TI_1320129615   .b 899 to 1332 328 to 761       434/434
(100 %)
0 diff
(100 %id)
TI_2194575596   .b 993 to 2025 1105 to 74       1032/1269
(81 %)
3 diff
(99.8 %id)
TI_1320130427   .b 1002 to 2027 1 to 1026   tiling clone,   1026/1303
(78 %)
6 diff
(99.6 %id)
TI_2194575593   .b 1056 to 2025 1036 to 67       970/1221
(79 %)
5 diff
(99.6 %id)
TI_1320129616   .b 1078 to 1309 314 to 545       232/232
(100 %)
7 diff
(97.0 %id)
TI_1320131747   .b 1460 to 2027 13 to 579       567/1226
(46 %)
7 diff
(99.5 %id)
TI_1320129617   .b 1481 to 1912 301 to 732       432/432
(100 %)
5 diff
(98.9 %id)
DB345753 thymus .b 3253 to 3803 549 to 1   tiling clone,   549/549
(100 %)
1 diff
(99.9 %id)
CR741753   .b 3603 to 3831 249 to 20   AAA Submitted on the opposite strand 230/239
(96 %)
6 diff
(97.5 %id)
BX116426 Ewing's sarcoma .b 3609 to 3831 237 to 15   tiling clone, AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 223/242
(92 %)
0 diff
(100 %id)
AA662593 Ewing's sarcoma .b 3618 to 3831 1 to 214   AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 214/214
(100 %)
2 diff
(99.1 %id)
BP270285 small intestine .c 1 to 593 1 to 592 A131P F141L A142R S143V K146R ... tiling clone,   592/592
(100 %)
6 diff
(99.0 %id)
AA406560.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1 to 471 470 to 1 Y8M A9Q I10S I11L V12W ... tiling clone, also hits gene fokly 470/472
(99 %)
1 diff
(99.8 %id)
AJ459241 brain Gene SLC17A8, variant not shown         Suspected internal deletion, this clone was ignored    
TI_2194576588   Gene SLC17A8, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC