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Gene SLC15A4TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
351 supporting clones for gene SLC15A4 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA732750   .a 1876 to 2192 317 to 2       316/318
(99 %)
0 diff
(100 %id)
AA307073 colon .k-u 1 to 405 10 to 417 S12P C18W Y19X R21* tiling clone,   408/418
(97 %)
6 diff
(98.6 %id)
AA315756 colon .h-u 279 to 604 1 to 326       326/326
(100 %)
1 diff
(99.7 %id)
AA323865 brain, cerebellum .d 388 to 749 1 to 363       363/363
(100 %)
2 diff
(99.5 %id)
AA337185 endometrium .a 1373 to 1527 1 to 155       155/155
(100 %)
1 diff
(99.4 %id)
AA365997 Pancreas .a 1589 to 1837 1 to 251       251/256
(98 %)
5 diff
(98.1 %id)
AA383766 thyroid gland .a 1813 to 2097 1 to 286       286/287
(99 %)
4 diff
(98.7 %id)
DA014749 adrenal gland .g-u 1263 to 1806 2 to 545   tiling clone, capped   544/544
(100 %)
1 diff
(99.9 %id)
DB295379 adrenal gland .g-u 4663 to 5173 512 to 1   tiling clone,   512/518
(98 %)
1 diff
(99.9 %id)
AF461893   .d 492 to 2395 1 to 1906 V161R G162R S163V F164V V165R ... tiling clone, AAA   1906/1906
(100 %)
7 diff
(99.7 %id)
AK095717 brain .d 1 to 2401 2 to 2403 exact tiling clone, available from FLJ,   2403/2403
(100 %)
7 diff
(99.8 %id)
AK097154 Spleen .h-u 1102 to 3178 1 to 2077   tiling clone, available from FLJ,   2077/2077
(100 %)
5 diff
(99.8 %id)
AW837534 leiomios .a 1147 to 1635 506 to 14       493/515
(95 %)
7 diff
(98.7 %id)
AW837536 leiomios .c 604 to 1078 46 to 521       476/521
(91 %)
6 diff
(98.9 %id)
AW837600 leiomios .a 1261 to 1635 400 to 27       374/400
(93 %)
1 diff
(99.8 %id)
AW958798   .a 1814 to 2441 1 to 630       630/631
(99 %)
23 diff
(96.4 %id)
AW958803   .a 1814 to 2439 1 to 631       631/631
(100 %)
18 diff
(97.2 %id)
AW966067   .a 1590 to 2209 1 to 625       625/627
(99 %)
17 diff
(97.3 %id)
AW966216   .a 1374 to 2045 1 to 663       663/670
(98 %)
28 diff
(95.9 %id)
AW976765   .a 140 to 502 1 to 365       365/426
(85 %)
12 diff
(97.2 %id)
AY038999 whole brain .a 1 to 2768 1 to 2769 exact tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 2769/2769
(100 %)
10 diff
(99.7 %id)
T10188   .g-u 4870 to 5165 299 to 4       296/299
(98 %)
0 diff
(100 %id)
T10189   .g-u 1506 to 1834 16 to 348   tiling clone,   333/349
(95 %)
6 diff
(98.3 %id)
AU185890 skin .d 2054 to 2394 341 to 1       341/341
(100 %)
0 diff
(100 %id)
BC146803 Clones donated by RIKEN .a 28 to 2787 1 to 2758 A24T E44G Y342C V343F L344T ... AAA   2758/2758
(100 %)
8 diff
(99.8 %id)
BE161271 head_neck .d 2108 to 2300 193 to 1     Submitted on the opposite strand 193/193
(100 %)
2 diff
(99.0 %id)
BE161274 head_neck .d 2108 to 2300 1 to 192       192/192
(100 %)
1 diff
(99.5 %id)
BE161276 head_neck .d 2104 to 2300 19 to 216       198/216
(91 %)
6 diff
(97.3 %id)
BE170717 head_neck .a 835 to 1144 318 to 11     Submitted on the opposite strand 308/318
(96 %)
1 diff
(99.7 %id)
BE774532 uterus .a 1679 to 1918 277 to 42       236/284
(83 %)
0 diff
(100 %id)
BF856438 prostate_normal .a 1809 to 2161 4 to 355       352/356
(98 %)
6 diff
(98.4 %id)
BF904403 marrow .a 1812 to 2165 357 to 4     Submitted on the opposite strand 354/357
(99 %)
0 diff
(100 %id)
BG319617 skin .d 2003 to 2097 1 to 95       95/95
(100 %)
0 diff
(100 %id)
BG925254 cartilage .d 2034 to 2401 79 to 446   AAA   368/385
(95 %)
6 diff
(98.5 %id)
BG995408 head_neck .h-u 407 to 785 379 to 1 exact tiling clone,   379/379
(100 %)
6 diff
(98.5 %id)
BI040586 nervous_tumor .h-u 1120 to 1422 14 to 315       302/315
(95 %)
11 diff
(96.6 %id)
BQ329911 lung_normal .a 1753 to 2243 20 to 519       500/523
(95 %)
31 diff
(94.1 %id)
DA144534 amygdala .a 239 to 669 2 to 432   capped   431/431
(100 %)
0 diff
(100 %id)
DA146061 amygdala .g-u 1262 to 1791 2 to 531   tiling clone, capped   530/530
(100 %)
1 diff
(99.9 %id)
DA176814 amygdala .a 681 to 1141 2 to 462   capped   461/461
(100 %)
0 diff
(100 %id)
DB302794 amygdala .a 2222 to 2793 572 to 1       572/572
(100 %)
4 diff
(99.4 %id)
DA216034 brain .g-u 2949 to 3481 2 to 534   tiling clone, capped   533/533
(100 %)
2 diff
(99.7 %id)
DB304715 brain .g-u 4611 to 5167 557 to 1   tiling clone,   557/557
(100 %)
1 diff
(99.9 %id)
DA252791 caudate nucleus .a 873 to 1348 2 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
DA329558 hippocampus .b 2181 to 2616 2 to 438   tiling clone, capped   437/437
(100 %)
1 diff
(99.8 %id)
DA334805 hippocampus .g-u 1 to 569 2 to 571   tiling clone, to resequence, capped   570/570
(100 %)
2 diff
(99.7 %id)
DB309833 hippocampus .g-u 4632 to 5173 543 to 1   tiling clone, to resequence,   543/543
(100 %)
1 diff
(99.9 %id)
DA342012 substantia nigra .a 242 to 814 2 to 574   capped   573/577
(99 %)
1 diff
(99.9 %id)
DA381625 thalamus .d 362 to 1005 2 to 645   capped   644/644
(100 %)
1 diff
(99.9 %id)
DA408527 thalamus .h-u 1 to 559 2 to 560   tiling clone, to resequence, capped   559/559
(100 %)
3 diff
(99.5 %id)
DB312485 thalamus .h-u 2596 to 3178 584 to 1   to resequence,   584/584
(100 %)
5 diff
(99.2 %id)
C75311   .d 2020 to 2402 393 to 8       386/404
(95 %)
0 diff
(100 %id)
CB269420 adipose .a 1559 to 2169 1 to 612       612/612
(100 %)
3 diff
(99.6 %id)
CD637314   .a 600 to 764 1 to 165       165/180
(91 %)
6 diff
(96.7 %id)
CD637315   .a 607 to 764 172 to 15       158/179
(88 %)
0 diff
(100 %id)
CN340496 embryonic stem cells, DMSO-treated H9 cellline .a 1335 to 2053 1 to 720       720/720
(100 %)
1 diff
(99.9 %id)
CN340497 embryonic stem cells, DMSO-treated H9 cellline .a 1721 to 2433 9 to 721       713/721
(98 %)
2 diff
(99.8 %id)
CN340498 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 649 to 1209 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BP221337 colon .c 519 to 1098 1 to 580       580/580
(100 %)
7 diff
(98.8 %id)
CR609573 thymus .a 1859 to 2770 1 to 912   tiling clone,   912/912
(100 %)
0 diff
(100 %id)
CR611128 B cells (Ramos cell line) Cot 25-normalized .a 605 to 2759 1 to 2155       2155/2155
(100 %)
0 diff
(100 %id)
BX414884 thymus .g-u 2696 to 3642 10 to 953 Q41S K42E V43G N44K L45P ...     944/962
(98 %)
11 diff
(98.9 %id)
BX426028 thymus .g-u 2696 to 3788 10 to 1101 Q41S K42E V43G N44K L45P ... tiling clone,   1092/1106
(98 %)
19 diff
(98.3 %id)
BX447450 thymus .g-u 2696 to 3530 10 to 843 Q41S K42E V43G N44K L45P ...     834/1094
(76 %)
19 diff
(98.3 %id)
BX415294 thymus .c 1661 to 2563 908 to 1   tiling clone,   908/908
(100 %)
42 diff
(95.4 %id)
BX415295 thymus .c 780 to 1631 1 to 854 F130L A131C S132K I133Y A134R ... tiling clone,   854/854
(100 %)
5 diff
(99.5 %id)
BX457164 thymus .a 2456 to 2761 306 to 1   fully sequenced,   306/306
(100 %)
1 diff
(99.7 %id)
BX457165 thymus .a 1862 to 2770 1 to 910   fully sequenced,   910/910
(100 %)
2 diff
(99.8 %id)
BX331466 Neuroblastoma Cot 10-normalized .b 1 to 1031 1 to 1025   tiling clone,   1026/1061
(96 %)
20 diff
(98.2 %id)
BX403206.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .g-u 2696 to 3473 10 to 789 Q41S K42E V43G N44K L45P ...   also hits gene MEX3AandUBQLN4 780/796
(97 %)
15 diff
(98.2 %id)
BX419419 brain, fetal brain .c 1 to 1001 1 to 997   tiling clone,   997/997
(100 %)
5 diff
(99.5 %id)
BX447687 T cells (Jurkat cell line) .a 1724 to 2730 1031 to 24       1008/1031
(97 %)
58 diff
(94.4 %id)
BX393250   .a 1659 to 2227 570 to 1       570/599
(95 %)
18 diff
(97.0 %id)
BX401086   .a 289 to 1142 1 to 851       851/851
(100 %)
3 diff
(99.7 %id)
BX329324   .a 989 to 1897 907 to 1       907/919
(98 %)
30 diff
(96.8 %id)
BX363695   .a 1762 to 2759 999 to 1       999/999
(100 %)
5 diff
(99.5 %id)
BX363696   .a 605 to 1462 1 to 856       856/856
(100 %)
3 diff
(99.7 %id)
CU443925 epidermis .a 1631 to 1915 18 to 302       285/315
(90 %)
3 diff
(99.1 %id)
CU453848 epidermis .a 1631 to 1915 18 to 302       285/315
(90 %)
3 diff
(99.1 %id)
CU455235 epidermis .a 1631 to 1915 18 to 302       285/315
(90 %)
3 diff
(99.1 %id)
BX470513   .b 1679 to 2260 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
BX470514   .b 3077 to 3613 550 to 13   tiling clone,   538/550
(97 %)
0 diff
(100 %id)
DN916770   .a 1543 to 1946 1 to 404       404/404
(100 %)
4 diff
(99.1 %id)
DN916771   .d 1897 to 2403 507 to 1   tiling clone,   507/507
(100 %)
1 diff
(99.9 %id)
DW418043 Liver .a 1750 to 2037 17 to 304       288/304
(94 %)
6 diff
(98.1 %id)
EL950197 eyeball .d 1847 to 2401 580 to 26   tiling clone, AAA Submitted on the opposite strand 555/566
(98 %)
0 diff
(100 %id)
DA518782 brain .a 224 to 563 2 to 341   capped   340/340
(100 %)
3 diff
(99.2 %id)
DB317059 brain .a 2253 to 2793 542 to 1       542/542
(100 %)
5 diff
(99.1 %id)
FN050470 breast carcinoma .d 2232 to 2337 104 to 3     Submitted on the opposite strand 102/112
(91 %)
0 diff
(100 %id)
FN083249 breast carcinoma .a 2063 to 2164 98 to 1     Submitted on the opposite strand 98/99
(98 %)
4 diff
(96.0 %id)
FN120363 breast carcinoma .d 2046 to 2138 1 to 93       93/93
(100 %)
0 diff
(100 %id)
FN128108 breast carcinoma .a 2124 to 2192 1 to 69       69/69
(100 %)
0 diff
(100 %id)
FN137194 breast carcinoma .d 2032 to 2125 1 to 93       93/93
(100 %)
2 diff
(97.9 %id)
FN145404 breast carcinoma .d 1975 to 2078 1 to 99       99/99
(100 %)
5 diff
(95.0 %id)
FN172889 breast carcinoma .d 2109 to 2218 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
CD676230 eye, lens .a 1068 to 1187 1 to 120       120/120
(100 %)
0 diff
(100 %id)
AV649960 corresponding non cancerous liver tissue .a 1812 to 2257 69 to 515     Submitted on the opposite strand 447/515
(86 %)
6 diff
(98.9 %id)
DB525785 testis .a 2141 to 2793 1 to 653     Submitted on the opposite strand 653/653
(100 %)
6 diff
(99.1 %id)
DB636404 testis .a 19 to 606 1 to 587       587/658
(89 %)
31 diff
(95.3 %id)
DB463137 hippocampus .i 2 to 431 1 to 429 V25W D26M E27K R28G L29* tiling clone,   429/429
(100 %)
6 diff
(98.7 %id)
DB528933 hippocampus .d 1941 to 2401 1 to 462     Submitted on the opposite strand 462/462
(100 %)
3 diff
(99.4 %id)
DB464501 hippocampus .i 1 to 431 1 to 432 C2L L3I L4P P5K K6D ... tiling clone,   432/434
(99 %)
15 diff
(96.6 %id)
DB530754 hippocampus .d 1958 to 2394 1 to 436     Submitted on the opposite strand 436/437
(99 %)
3 diff
(99.4 %id)
DB467394 hippocampus .i 2 to 453 1 to 454 Q38A R39A V40R L41A S42E ... tiling clone,   454/454
(100 %)
5 diff
(98.9 %id)
DB534395 hippocampus .d 1982 to 2394 1 to 413     Submitted on the opposite strand 413/414
(99 %)
3 diff
(99.3 %id)
DB536620 hippocampus .d 2002 to 2398 1 to 398     Submitted on the opposite strand 398/400
(99 %)
3 diff
(99.3 %id)
DB479289 hippocampus .a 490 to 788 1 to 299       299/317
(94 %)
10 diff
(96.9 %id)
DB547974 hippocampus .d 1929 to 2401 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
DB479903 hippocampus .a 86 to 591 1 to 506       506/507
(99 %)
4 diff
(99.3 %id)
DB480005 hippocampus .a 238 to 746 1 to 509       509/509
(100 %)
0 diff
(100 %id)
DB548732 hippocampus .d 1954 to 2398 1 to 445     Submitted on the opposite strand 445/447
(99 %)
1 diff
(99.8 %id)
DB551196 hippocampus .a 2080 to 2787 1 to 707     Submitted on the opposite strand 707/707
(100 %)
11 diff
(98.5 %id)
DB503087 hypothalamus .a 347 to 787 1 to 441       441/441
(100 %)
1 diff
(99.8 %id)
DB574296 hypothalamus .d 1943 to 2401 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
DB577509 hypothalamus .a 2065 to 2793 1 to 725     Submitted on the opposite strand 725/725
(100 %)
14 diff
(98.1 %id)
BP395032 pancreatic islet .a 1838 to 2175 1 to 338     Submitted on the opposite strand 338/338
(100 %)
0 diff
(100 %id)
BP396861 pancreatic islet .a 1732 to 2197 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
DA552459   .f 1 to 528 2 to 529 exact tiling clone, capped   528/528
(100 %)
2 diff
(99.7 %id)
DA578930   .a 242 to 801 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
BP256207 Kidney .a 659 to 1239 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AV724367 hypothalamus .a 961 to 1594 1 to 628       628/636
(98 %)
9 diff
(98.6 %id)
AV723103 hypothalamus .d 1888 to 2399 557 to 47     Submitted on the opposite strand 511/648
(78 %)
0 diff
(100 %id)
AV723104 hypothalamus .d 1849 to 2403 593 to 44     Submitted on the opposite strand 550/634
(86 %)
0 diff
(100 %id)
AV726634 hypothalamus .a 1357 to 1878 1 to 523       523/622
(84 %)
10 diff
(98.4 %id)
R51893 whole brain .a 2472 to 2793 340 to 14   AAA   327/328
(99 %)
5 diff
(98.5 %id)
R54281 whole brain .a 1318 to 1784 1 to 471       471/474
(99 %)
11 diff
(97.7 %id)
H65822 liver and spleen .b 1278 to 1718 440 to 1       440/441
(99 %)
10 diff
(97.8 %id)
H65908 liver and spleen .b 788 to 1195 1 to 413   tiling clone,   413/425
(97 %)
10 diff
(97.7 %id)
H73031 liver and spleen .b 787 to 1207 1 to 427   tiling clone,   427/438
(97 %)
7 diff
(98.5 %id)
H77921 liver and spleen .b 1290 to 1694 406 to 1       406/407
(99 %)
6 diff
(98.6 %id)
H88051 cochlea, ear .d 1898 to 2264 1 to 369   fully sequenced,   369/369
(100 %)
5 diff
(98.7 %id)
H88262 cochlea, ear .d 2234 to 2375 146 to 1   fully sequenced,   146/146
(100 %)
0 diff
(100 %id)
W53019 senescent fibroblast .a 465 to 1115 642 to 1     Submitted on the opposite strand 642/643
(99 %)
13 diff
(98.0 %id)
W40166 Pancreas, pancreatic islet .a 1106 to 1431 1 to 331       331/346
(95 %)
8 diff
(97.7 %id)
W45294 Pancreas, pancreatic islet .a 1811 to 2225 414 to 1       414/414
(100 %)
2 diff
(99.6 %id)
W65430 heart .a 2142 to 2500 1 to 362   fully sequenced,   362/362
(100 %)
4 diff
(98.9 %id)
W65479 heart .a 2470 to 2793 328 to 1   fully sequenced,   328/328
(100 %)
1 diff
(99.7 %id)
AA721966 pineal gland .a 1750 to 2193 441 to 1       441/441
(100 %)
6 diff
(98.7 %id)
AA772486 pineal gland .a 1838 to 2192 354 to 1       354/354
(100 %)
2 diff
(99.5 %id)
AA009923 liver and spleen .a 998 to 1458 1 to 465       465/475
(97 %)
10 diff
(97.9 %id)
AA031728 uterus .d 1799 to 2294 1 to 500       500/500
(100 %)
8 diff
(98.4 %id)
AA031619.
matches multiple genes
uterus .d 1962 to 2401 444 to 1     also hits gene CHST15 444/444
(100 %)
4 diff
(99.1 %id)
AA046897 uterus .a 1748 to 1969 1 to 222       222/222
(100 %)
3 diff
(98.7 %id)
AA046962 uterus .a 2460 to 2787 331 to 1       331/377
(87 %)
5 diff
(98.7 %id)
AA708726 uterus .d 2098 to 2398 307 to 7       301/307
(98 %)
0 diff
(100 %id)
AA076314   .a 1601 to 1900 309 to 1   fully sequenced,   309/309
(100 %)
4 diff
(98.8 %id)
AA076486   .a 1338 to 1661 1 to 335   fully sequenced,   335/335
(100 %)
7 diff
(98.0 %id)
AA111854   .d 1995 to 2398 420 to 5       416/425
(97 %)
0 diff
(100 %id)
AA234173 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1421 to 1635 223 to 5     Submitted on the opposite strand 219/223
(98 %)
0 diff
(100 %id)
AA287817 germinal center B cell .d 1910 to 2397 488 to 1     Submitted on the opposite strand 488/488
(100 %)
0 diff
(100 %id)
AA287835 germinal center B cell .a 214 to 441 1 to 226     Submitted on the opposite strand 226/226
(100 %)
2 diff
(99.2 %id)
AA281661 germinal center B cell .g-u 3244 to 3593 347 to 1     Submitted on the opposite strand 347/347
(100 %)
3 diff
(99.2 %id)
AA281662 germinal center B cell .g-u 2878 to 3249 1 to 372   tiling clone, Submitted on the opposite strand 372/372
(100 %)
3 diff
(99.2 %id)
AA478708 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1800 to 2226 1 to 427       427/427
(100 %)
2 diff
(99.6 %id)
AA478573 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1993 to 2401 409 to 1       409/409
(100 %)
0 diff
(100 %id)
AA453971   .a 1672 to 2002 1 to 331       331/331
(100 %)
0 diff
(100 %id)
AA644330 lung, lung carcinoma .a 1997 to 2166 170 to 1       170/170
(100 %)
0 diff
(100 %id)
AA534598 colon .d 2000 to 2401 402 to 1       402/411
(97 %)
12 diff
(97.1 %id)
AA599138 lung, lung carcinoma .d 1964 to 2401 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AA731761 germinal center B cell .a 184 to 259 1 to 76     Submitted on the opposite strand 76/76
(100 %)
0 diff
(100 %id)
AA748612 germinal center B cell .a 196 to 286 1 to 91     Submitted on the opposite strand 91/91
(100 %)
4 diff
(95.7 %id)
AA743881 germinal center B cell .a 190 to 370 1 to 181     Submitted on the opposite strand 181/187
(96 %)
6 diff
(96.8 %id)
AA740776 germinal center B cell .a 386 to 699 1 to 308     Submitted on the opposite strand 308/309
(99 %)
8 diff
(97.5 %id)
AA761785 germinal center B cell .d 2038 to 2402 373 to 9       365/373
(97 %)
0 diff
(100 %id)
AA768830 germinal center B cell .a 187 to 259 1 to 73     Submitted on the opposite strand 73/73
(100 %)
0 diff
(100 %id)
AA810858 germinal center B cell .d 2004 to 2402 407 to 9       399/407
(98 %)
0 diff
(100 %id)
AA938723 germinal center B cell .d 1964 to 2395 462 to 31   AAA   432/432
(100 %)
0 diff
(100 %id)
AA830471 germinal center B cell .d 1957 to 2395 468 to 30   AAA   439/439
(100 %)
0 diff
(100 %id)
AA847922 germinal center B cell .a 1990 to 2202 213 to 1       213/403
(52 %)
1 diff
(99.8 %id)
AA827338 Kidney, kidney tumor .a 1792 to 2166 374 to 1       374/374
(100 %)
1 diff
(99.8 %id)
AA887506 carcinoid, lung .d 1865 to 2197 1 to 335     Submitted on the opposite strand 335/335
(100 %)
2 diff
(99.5 %id)
AA913475 pooled .a 169 to 232 1 to 64     Submitted on the opposite strand 64/64
(100 %)
1 diff
(98.5 %id)
AA913468 pooled .d 2072 to 2401 347 to 18   AAA   330/330
(100 %)
0 diff
(100 %id)
AA927212 pooled .a 217 to 345 1 to 129     Submitted on the opposite strand 129/130
(99 %)
5 diff
(96.2 %id)
AA909954 pooled .a 214 to 449 1 to 233     Submitted on the opposite strand 233/233
(100 %)
6 diff
(97.5 %id)
AA972358 carcinoid, lung .d 1958 to 2400 443 to 1       443/443
(100 %)
3 diff
(99.4 %id)
AA973851 pooled germ cell tumors .a 1771 to 2192 421 to 1       421/421
(100 %)
3 diff
(99.3 %id)
AA985148 schizophrenic brain S-11 frontal lobe .g-u 318 to 575 258 to 1   tiling clone,   258/258
(100 %)
1 diff
(99.7 %id)
AI032598 liver and spleen .b 1244 to 1716 471 to 1       471/471
(100 %)
5 diff
(99.0 %id)
AI033131 liver and spleen .a 1783 to 2192 409 to 1       409/409
(100 %)
2 diff
(99.6 %id)
AI088217 heart .d 1957 to 2401 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AI139820   .d 1911 to 2395 520 to 36   AAA   485/485
(100 %)
1 diff
(99.8 %id)
AI222006 pooled .a 122 to 453 1 to 332     Submitted on the opposite strand 332/333
(99 %)
1 diff
(99.7 %id)
AI247350 pooled .a 122 to 553 1 to 431     Submitted on the opposite strand 431/431
(100 %)
1 diff
(99.8 %id)
AI243262 pooled .j 1 to 446 449 to 4 exact tiling clone,   446/449
(99 %)
0 diff
(100 %id)
AI273268 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 122 to 503 1 to 382     Submitted on the opposite strand 382/382
(100 %)
0 diff
(100 %id)
AI276754 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 140 to 574 1 to 435     Submitted on the opposite strand 435/435
(100 %)
1 diff
(99.8 %id)
AI290316 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 166 to 569 1 to 405     Submitted on the opposite strand 405/405
(100 %)
3 diff
(99.3 %id)
AI310382 2 pooled tumors (clear cell type), Kidney .d 1986 to 2401 427 to 12   AAA   416/416
(100 %)
0 diff
(100 %id)
AI347549 2 pooled tumors (clear cell type), Kidney .d 1978 to 2402 432 to 8       425/432
(98 %)
0 diff
(100 %id)
AI307334 2 pooled tumors (clear cell type), Kidney .d 1966 to 2402 440 to 4       437/440
(99 %)
0 diff
(100 %id)
AI307761 2 pooled tumors (clear cell type), Kidney .d 1978 to 2401 447 to 24   AAA   424/424
(100 %)
1 diff
(99.8 %id)
AI377084 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1985 to 2401 417 to 1       417/417
(100 %)
2 diff
(99.6 %id)
AI868632 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 122 to 469 1 to 348     Submitted on the opposite strand 348/348
(100 %)
0 diff
(100 %id)
AI805139 B-cell, chronic lymphotic leukemia .a 122 to 573 1 to 452     Submitted on the opposite strand 452/452
(100 %)
2 diff
(99.6 %id)
AI420752 Prostate .d 1906 to 2395 490 to 1       490/490
(100 %)
0 diff
(100 %id)
AI917176 pooled germ cell tumors .d 1935 to 2402 472 to 5       468/472
(99 %)
0 diff
(100 %id)
AI828859 pooled germ cell tumors .d 2049 to 2401 363 to 11   AAA   353/353
(100 %)
0 diff
(100 %id)
AI655884 pooled germ cell tumors .b 1020 to 1716 692 to 1   tiling clone,   694/693
(100 %)
8 diff
(98.9 %id)
AI619514 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 2059 to 2395 346 to 14   AAA   333/333
(100 %)
4 diff
(98.8 %id)
AI685360 pooled .a 122 to 600 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
AI915339 pooled .d 2127 to 2402 278 to 3       276/278
(99 %)
0 diff
(100 %id)
AI703385 carcinoid, lung .d 1878 to 2391 523 to 10       514/523
(98 %)
0 diff
(100 %id)
AI694925 carcinoid, lung .d 1992 to 2401 422 to 12   AAA   411/411
(100 %)
6 diff
(98.6 %id)
AI660053 thymus, pooled .d 1861 to 2345 1 to 485     Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
AI797936 pooled .d 1934 to 2398 467 to 3       465/467
(99 %)
0 diff
(100 %id)
AI827875 pooled .a 122 to 445 1 to 324     Submitted on the opposite strand 324/327
(99 %)
1 diff
(99.7 %id)
AI829672 pooled .a 163 to 607 1 to 445     Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
AI809958 pooled .a 122 to 649 1 to 528     Submitted on the opposite strand 528/528
(100 %)
0 diff
(100 %id)
AI810093 pooled .a 154 to 604 1 to 451     Submitted on the opposite strand 451/451
(100 %)
0 diff
(100 %id)
AI808895 pooled .a 122 to 600 1 to 479     Submitted on the opposite strand 479/479
(100 %)
0 diff
(100 %id)
AI740990 pooled .a 122 to 639 1 to 518     Submitted on the opposite strand 518/527
(98 %)
1 diff
(99.9 %id)
AI765960 Kidney .d 1905 to 2401 523 to 26   AAA   498/498
(100 %)
8 diff
(98.4 %id)
AI761208 2 pooled tumors (clear cell type), Kidney .d 1934 to 2402 475 to 7       469/475
(98 %)
0 diff
(100 %id)
AI818075 lymph node, lymphoma, follicular mixed small and largecell .a 131 to 469 1 to 339     Submitted on the opposite strand 339/339
(100 %)
7 diff
(98.0 %id)
AI818087 anaplastic oligodendroglioma, brain .d 1852 to 2401 550 to 1       550/550
(100 %)
1 diff
(99.9 %id)
AI885507 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 1978 to 2401 441 to 18   AAA   424/424
(100 %)
0 diff
(100 %id)
AI923951 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1741 to 2192 466 to 15   AAA   452/452
(100 %)
0 diff
(100 %id)
AI927494 Kidney .a 122 to 649 1 to 528     Submitted on the opposite strand 528/528
(100 %)
0 diff
(100 %id)
AI936932 anaplastic oligodendroglioma, brain .a 122 to 648 1 to 527     Submitted on the opposite strand 527/527
(100 %)
2 diff
(99.7 %id)
AI962811 pooled germ cell tumors .d 1860 to 2402 548 to 6       543/548
(99 %)
0 diff
(100 %id)
AW002879 pooled germ cell tumors .d 1859 to 2402 548 to 5       544/548
(99 %)
0 diff
(100 %id)
AW002244 thymus, pooled .d 1861 to 2264 1 to 403     Submitted on the opposite strand 403/403
(100 %)
2 diff
(99.6 %id)
AW051811 brain, glioblastoma (pooled) .d 1924 to 2401 478 to 1       478/478
(100 %)
2 diff
(99.6 %id)
AW082305 pooled .a 122 to 636 1 to 515     Submitted on the opposite strand 515/515
(100 %)
1 diff
(99.9 %id)
AW104924 pooled .a 166 to 605 1 to 442     Submitted on the opposite strand 442/460
(96 %)
5 diff
(99.0 %id)
AW192879 adenocarcinoma, Pancreas .a 1214 to 1900 705 to 20   AAA   686/686
(100 %)
11 diff
(98.4 %id)
AW134652   .a 1727 to 2192 482 to 17   AAA   466/466
(100 %)
1 diff
(99.8 %id)
AW136648   .d 1995 to 2401 424 to 18   AAA   407/407
(100 %)
0 diff
(100 %id)
AW517973 Kidney, renal cell tumor .d 1987 to 2401 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AW304786 brain, three pooled meningiomas .a 1625 to 2192 568 to 1       568/568
(100 %)
0 diff
(100 %id)
AW337437 lymph node, lymphoma, follicular mixed small and largecell .d 1967 to 2402 438 to 3       436/438
(99 %)
0 diff
(100 %id)
AW510703 pooled .a 122 to 712 1 to 591     Submitted on the opposite strand 591/591
(100 %)
4 diff
(99.4 %id)
AW340493 pooled .a 122 to 632 1 to 513     Submitted on the opposite strand 513/513
(100 %)
2 diff
(99.7 %id)
AW340616 pooled .a 122 to 637 1 to 516     Submitted on the opposite strand 516/516
(100 %)
2 diff
(99.7 %id)
AW573006 pooled .a 140 to 409 1 to 270     Submitted on the opposite strand 270/270
(100 %)
0 diff
(100 %id)
AW573162 pooled .a 122 to 575 1 to 454     Submitted on the opposite strand 454/454
(100 %)
2 diff
(99.6 %id)
AW593227 pooled .a 166 to 639 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
AW629286 pooled .a 122 to 572 1 to 451     Submitted on the opposite strand 451/451
(100 %)
0 diff
(100 %id)
AW665415 pooled .a 122 to 639 1 to 518     Submitted on the opposite strand 518/518
(100 %)
2 diff
(99.7 %id)
BE042863 colon, moderately-differentiated adenocarcinoma .d 1978 to 2401 436 to 13   AAA   424/424
(100 %)
0 diff
(100 %id)
BE044253 pooled .a 154 to 394 1 to 241     Submitted on the opposite strand 241/241
(100 %)
0 diff
(100 %id)
AW407970 lymph .d 1936 to 2341 406 to 1     Submitted on the opposite strand 406/406
(100 %)
4 diff
(99.1 %id)
AW407219 lymph .d 1975 to 2402 435 to 8     Submitted on the opposite strand 428/435
(98 %)
0 diff
(100 %id)
AW408136 lymph .d 1912 to 2368 464 to 8     Submitted on the opposite strand 457/464
(98 %)
0 diff
(100 %id)
BF512747   .a 123 to 586 1 to 464     Submitted on the opposite strand 464/464
(100 %)
1 diff
(99.8 %id)
AW499902 lymph .a 1360 to 1917 1 to 558       558/558
(100 %)
5 diff
(99.2 %id)
BF514333   .a 123 to 556 1 to 434     Submitted on the opposite strand 434/434
(100 %)
0 diff
(100 %id)
BQ027924 mixed .a 2166 to 2793 647 to 19   AAA   629/629
(100 %)
2 diff
(99.7 %id)
BE219452 carcinoid, lung .d 1861 to 2315 1 to 455     Submitted on the opposite strand 455/455
(100 %)
5 diff
(99.0 %id)
BE220074 carcinoid, lung .d 1860 to 2319 1 to 460     Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
BE551739 pooled germ cell tumors .d 1853 to 2398 550 to 5       546/550
(99 %)
0 diff
(100 %id)
BE502489 pooled germ cell tumors .a 1547 to 2225 680 to 1       680/686
(99 %)
21 diff
(97.0 %id)
BE466159 carcinoid, lung .d 1934 to 2402 470 to 2       469/471
(99 %)
0 diff
(100 %id)
BG150148 carcinoid, lung .a 1863 to 2194 332 to 1       332/332
(100 %)
0 diff
(100 %id)
BF732603 fibrotheoma, ovary .a 148 to 490 1 to 343     Submitted on the opposite strand 343/343
(100 %)
8 diff
(97.7 %id)
BF057443 fibrotheoma, ovary .a 124 to 503 1 to 381     Submitted on the opposite strand 381/381
(100 %)
1 diff
(99.8 %id)
BF108753 pooled .a 122 to 638 1 to 517     Submitted on the opposite strand 517/517
(100 %)
1 diff
(99.9 %id)
BF434548 Kidney .d 2094 to 2395 303 to 1       303/303
(100 %)
1 diff
(99.7 %id)
BF197557 Kidney .d 1885 to 2402 524 to 7       518/524
(98 %)
0 diff
(100 %id)
BE906066 epithelioid carcinoma, Pancreas .a 1352 to 2057 1 to 705       705/707
(99 %)
5 diff
(99.3 %id)
BE907852 epithelioid carcinoma, Pancreas .a 867 to 1615 1 to 753       753/810
(92 %)
15 diff
(98.2 %id)
BE968507 heart .a 2132 to 2691 1 to 573       573/850
(67 %)
53 diff
(93.8 %id)
BE898378 adenocarcinoma cell line, ovary .a 1730 to 2194 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
BF132412 hypernephroma, Kidney .a 1659 to 2246 1 to 591       591/828
(71 %)
23 diff
(97.3 %id)
BF183857 bone marrow, from chronic myelogenous leukemia .d 411 to 1013 1 to 592       592/845
(70 %)
20 diff
(97.7 %id)
BF247256 hypernephroma, Kidney .d 1813 to 2336 1 to 521   AAA   521/576
(90 %)
32 diff
(94.5 %id)
BG231549 blood, lymphocyte .d 1890 to 2400 511 to 1       511/511
(100 %)
1 diff
(99.9 %id)
BG035669 adenocarcinoma, cell line, Liver .a 1288 to 2039 1 to 745       745/960
(77 %)
12 diff
(98.8 %id)
BG167933 hypernephroma, cell line, Kidney .a 1162 to 1863 1 to 695       695/695
(100 %)
11 diff
(98.5 %id)
BM083917 carcinoid, lung .d 1865 to 2402 1 to 538     Submitted on the opposite strand 538/548
(98 %)
7 diff
(98.8 %id)
BG537141 lung .h-u 1724 to 2533 1 to 817       817/817
(100 %)
19 diff
(97.7 %id)
BG623434 placenta .a 1324 to 2093 1 to 768       768/770
(99 %)
5 diff
(99.4 %id)
BC028394 Brain, hippocampus .a 253 to 2225 1 to 1975   available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1975/1975
(100 %)
4 diff
(99.8 %id)
BG704247 brain, hippocampus .a 248 to 1001 1 to 752   available from MGC,   752/752
(100 %)
9 diff
(98.9 %id)
BG724225 testis .a 1554 to 2245 1 to 694       694/701
(99 %)
11 diff
(98.5 %id)
BG723689 testis .e 1 to 639 1 to 641 M2G K147X I148D L149T T150D ... tiling clone,   641/641
(100 %)
7 diff
(99.0 %id)
BI756818 brain .a 1416 to 2125 1 to 712       712/906
(78 %)
10 diff
(98.9 %id)
BI835145 pooled pancreas and spleen .h-u 1337 to 2166 1 to 844       844/845
(99 %)
22 diff
(97.4 %id)
BI913804 brain .a 1228 to 2008 1 to 779       779/779
(100 %)
3 diff
(99.7 %id)
BI914548 brain .a 1228 to 1981 1 to 755       755/755
(100 %)
2 diff
(99.8 %id)
BI600110 brain, hypothalamus .a 339 to 1253 1 to 917       917/923
(99 %)
22 diff
(97.7 %id)
BI560537 testis .b 326 to 1091 1 to 769   tiling clone,   769/776
(99 %)
24 diff
(97.0 %id)
BI962732 Islets of Langerhans, Pancreas .d 1859 to 2326 1 to 468       468/468
(100 %)
0 diff
(100 %id)
CK903326 Islets of Langerhans, Pancreas .d 1843 to 2387 1 to 545       545/545
(100 %)
1 diff
(99.9 %id)
BM907981 brain, medulla .a 482 to 1444 13 to 981       967/1076
(89 %)
20 diff
(98.2 %id)
BQ015164 Chondrosarcoma, Left Pubic Bone .a 1435 to 2192 775 to 19   AAA   757/757
(100 %)
2 diff
(99.8 %id)
BQ003290 Chondrosarcoma, Left Pelvis .a 2108 to 2793 703 to 19   AAA   685/685
(100 %)
3 diff
(99.6 %id)
BQ029078 lung, Metastatic Chondrosarcoma .d 1963 to 2401 457 to 19   AAA   439/439
(100 %)
2 diff
(99.6 %id)
BQ000287 Fibrosarcoma .a 2047 to 2793 763 to 19   AAA   745/745
(100 %)
6 diff
(99.2 %id)
BQ063076 lymph, lymphoma, cell line .a 29 to 589 1 to 561       561/1158
(48 %)
15 diff
(98.8 %id)
BQ065589 lymph, lymphoma, cell line .a 29 to 606 1 to 583       583/1109
(52 %)
11 diff
(99.1 %id)
BU182529 testis .a 2095 to 2790 1 to 698       698/703
(99 %)
4 diff
(99.5 %id)
BU781691 insulinoma, Pancreas .h-u 1796 to 2324 1 to 529   tiling clone,   529/529
(100 %)
5 diff
(99.1 %id)
BU786826 insulinoma, Pancreas .h-u 2605 to 3184 594 to 16   tiling clone, AAA   579/579
(100 %)
1 diff
(99.9 %id)
BU598523 mixed (pool of 40 RNAs) .a 1897 to 2606 1 to 716       716/854
(83 %)
27 diff
(96.9 %id)
BU963444 mixed (pool of 40 RNAs) .d 1893 to 2388 1 to 496       496/531
(93 %)
3 diff
(99.5 %id)
CX786912 human embryonic stem cells .a 1615 to 2350 1 to 737       737/737
(100 %)
3 diff
(99.6 %id)
CD000376 Pooled-Skin .a 1675 to 2267 1 to 606       606/767
(79 %)
21 diff
(97.3 %id)
CD171637 testis .a 972 to 1462 1 to 489       489/554
(88 %)
7 diff
(98.8 %id)
TI_57220066   .a 1415 to 2125 61 to 773       713/967
(73 %)
15 diff
(98.5 %id)
TI_57167020   .h-u 1326 to 2166 24 to 878   tiling clone,   855/879
(97 %)
6 diff
(99.4 %id)
TI_57241580   .a 1228 to 1981 34 to 788       755/788
(95 %)
7 diff
(99.2 %id)
TI_57241811   .a 1222 to 2008 24 to 808       785/808
(97 %)
8 diff
(99.1 %id)
TI_45211944   .a 340 to 1253 86 to 1001       916/1007
(90 %)
25 diff
(97.6 %id)
TI_44349525   .b 331 to 1091 90 to 853       764/860
(88 %)
25 diff
(97.1 %id)
BP432490   .a 1804 to 2130 1 to 327       327/327
(100 %)
4 diff
(98.8 %id)
DA636921 Liver .c 450 to 1239 2 to 787   tiling clone, capped   786/786
(100 %)
8 diff
(99.0 %id)
DB321103 Liver .c 2097 to 2603 508 to 1   tiling clone,   508/508
(100 %)
10 diff
(98.1 %id)
DA650992   .a 260 to 756 2 to 499   capped   498/498
(100 %)
2 diff
(99.6 %id)
BP295405   .a 1067 to 1647 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP298288   .d 2038 to 2401 1 to 363   AAA   363/363
(100 %)
2 diff
(99.5 %id)
NM_145648.3   .a 6 to 2794 1 to 2789 exact RefSeq,   2789/2789
(100 %)
0 diff
(100 %id)
DA731279   .a 348 to 1052 2 to 710   capped   709/805
(88 %)
9 diff
(98.9 %id)
DB363397   .a 2217 to 2793 573 to 1       573/575
(99 %)
13 diff
(97.8 %id)
CV575587 cornea, eye .a 61 to 627 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BM837993 Ascites, stomach .a 636 to 1264 1 to 629       629/629
(100 %)
0 diff
(100 %id)
BM794849 Ascites, stomach .a 1617 to 2227 1 to 612       612/616
(99 %)
2 diff
(99.7 %id)
DA940216 Spleen .h-u 1103 to 1684 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA960966 Spleen .a 239 to 569 2 to 332   capped   331/331
(100 %)
0 diff
(100 %id)
DN999430   .a 50 to 485 1 to 436       436/436
(100 %)
8 diff
(98.2 %id)
DB083822 testis .a 2162 to 2711 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
TI_154136992   .a 122 to 781 59 to 725     Submitted on the opposite strand 667/1444
(46 %)
19 diff
(98.7 %id)
TI_154145091   .d 1778 to 2402 712 to 81     Submitted on the opposite strand 632/635
(99 %)
36 diff
(94.4 %id)
TI_154145892   .a 2038 to 2731 770 to 82     Submitted on the opposite strand 689/899
(76 %)
0 diff
(100 %id)
TI_154147140   .d 1920 to 2334 494 to 80     Submitted on the opposite strand 415/419
(99 %)
1 diff
(99.8 %id)
TI_154147544   .a 1975 to 2760 862 to 80     Submitted on the opposite strand 783/829
(94 %)
49 diff
(94.1 %id)
TI_154148666   .d 1847 to 2360 599 to 81     Submitted on the opposite strand 519/599
(86 %)
0 diff
(100 %id)
TI_154154020   .a 1367 to 1994 80 to 707       628/633
(99 %)
2 diff
(99.7 %id)
TI_154195442   .a 523 to 1424 40 to 931       892/1020
(87 %)
13 diff
(98.8 %id)
TI_154196594   .a 523 to 1297 37 to 805       769/978
(78 %)
12 diff
(98.8 %id)
TI_154196978   .a 523 to 1147 44 to 668       625/986
(63 %)
9 diff
(99.1 %id)
TI_159688617   .a 1325 to 2216 952 to 71       882/1059
(83 %)
12 diff
(98.9 %id)
TI_159696407   .a 1470 to 2225 785 to 33   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 753/1018
(73 %)
11 diff
(99.0 %id)
TI_159714512   .d 1840 to 2403 64 to 627     Submitted on the opposite strand 564/1071
(52 %)
10 diff
(99.1 %id)
TI_227712346   .a 1321 to 2211 947 to 59       889/1070
(83 %)
7 diff
(99.4 %id)
TI_227712997   .a 1930 to 2796 946 to 83   AAA   864/986
(87 %)
26 diff
(97.4 %id)
DB190123 lung, tumor tissue .a 1033 to 1531 2 to 501   capped   500/500
(100 %)
2 diff
(99.6 %id)
BP366406 thymus .a 1127 to 1701 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
CF529196 placenta .d 2178 to 2401 242 to 19   AAA   224/224
(100 %)
1 diff
(99.6 %id)
CB306983 Human Lung Epithelial cells, lung .d 1847 to 2388 1 to 543     Submitted on the opposite strand 543/543
(100 %)
5 diff
(99.1 %id)
BU609098 Human Lung Epithelial cells, lung .d 1847 to 2401 1 to 560   AAA Submitted on the opposite strand 560/560
(100 %)
4 diff
(99.3 %id)
BM702718 eye, Retina Foveal and Macular .a 1483 to 2134 1 to 651       651/651
(100 %)
1 diff
(99.9 %id)
BU729704 eye, Retina Foveal and Macular .d 1933 to 2401 487 to 19   AAA   469/469
(100 %)
1 diff
(99.8 %id)
BM664120 eye, Retina Foveal and Macular .d 2042 to 2401 378 to 19   AAA   360/360
(100 %)
1 diff
(99.8 %id)
BM712767 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1927 to 2261 1 to 336       336/344
(97 %)
2 diff
(99.5 %id)
BM718098 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1927 to 2261 1 to 336       336/344
(97 %)
2 diff
(99.5 %id)
BQ447118 Knee, Osteoarthritic Cartilage .a 2135 to 2793 678 to 19   AAA   660/660
(100 %)
3 diff
(99.6 %id)
BU623715 cell lines, Enchondroma .a 1569 to 2192 642 to 19   AAA   624/642
(97 %)
1 diff
(99.9 %id)
CA419793 Bone, Human Chondrosarcoma Cell Line .a 1486 to 2192 723 to 19   AAA   705/705
(100 %)
3 diff
(99.6 %id)
BU618399 Cell Line, Chondrosarcoma .a 2090 to 2793 722 to 19   AAA   704/704
(100 %)
4 diff
(99.5 %id)
BU618245 Cell Line, Chondrosarcoma .a 2019 to 2793 789 to 19   AAA   771/775
(99 %)
9 diff
(98.9 %id)
BU620874 Cell Line, Chondrosarcoma .a 1660 to 2429 6 to 774     Submitted on the opposite strand 769/774
(99 %)
6 diff
(99.3 %id)
CD368097 Alveolar Macrophage, lung .a 2011 to 2793 798 to 19   AAA   780/782
(99 %)
8 diff
(99.0 %id)
CD743171 Alveolar Macrophage, lung .a 2059 to 2787 748 to 19   AAA   730/730
(100 %)
3 diff
(99.6 %id)
CD367066 Alveolar Macrophage, lung .a 1436 to 2192 775 to 19   AAA   757/757
(100 %)
3 diff
(99.7 %id)
CD367353 Alveolar Macrophage, lung .a 2151 to 2796 664 to 19   AAA   646/646
(100 %)
3 diff
(99.6 %id)
TI_151765542   .a 1612 to 2210 100 to 698   AAA   599/1121
(53 %)
12 diff
(99.0 %id)
TI_151718922   .a 1918 to 2261 410 to 65       346/756
(45 %)
0 diff
(100 %id)
TI_151757804   .a 1918 to 2261 413 to 68       346/965
(35 %)
0 diff
(100 %id)
AW995337 breast_normal .h-u 2605 to 3184 594 to 16   tiling clone, Submitted on the opposite strand, submitted on the opposite strand 579/579
(100 %)
1 diff
(99.9 %id)
AY050629   .h-u 2605 to 3184 594 to 16   tiling clone, AAA Suspected internal deletion, this clone was ignored 579/579
(100 %)
1 diff
(99.9 %id)
BE069512 breast .a 1897 to 2606 1 to 716       716/854
(83 %)
27 diff
(96.9 %id)
DA155017 amygdala .d 1893 to 2388 1 to 496   capped Suspected internal deletion, this clone was ignored 496/531
(93 %)
3 diff
(99.5 %id)
CR936821 fetal kidney .a 1615 to 2350 1 to 737   AAA This clone was ignored 737/737
(100 %)
3 diff
(99.6 %id)
AV723166 hypothalamus .a 1675 to 2267 1 to 606     Suspected internal deletion, this clone was ignored 606/767
(79 %)
21 diff
(97.3 %id)
R00439 liver and spleen .a 972 to 1462 1 to 489       489/554
(88 %)
7 diff
(98.8 %id)
R00440 liver and spleen .a 1415 to 2125 61 to 773       713/967
(73 %)
15 diff
(98.5 %id)
H30061 eye, retina .h-u 1326 to 2166 24 to 878   tiling clone, fully sequenced,   855/879
(97 %)
6 diff
(99.4 %id)
H30062 eye, retina .a 1228 to 1981 34 to 788   fully sequenced,   755/788
(95 %)
7 diff
(99.2 %id)
H30071 eye, retina .a 1222 to 2008 24 to 808   fully sequenced,   785/808
(97 %)
8 diff
(99.1 %id)
H30072 eye, retina .a 340 to 1253 86 to 1001   fully sequenced,   916/1007
(90 %)
25 diff
(97.6 %id)
AI636759 pooled germ cell tumors .b 331 to 1091 90 to 853     Suspected internal deletion, this clone was ignored 764/860
(88 %)
25 diff
(97.1 %id)
AW274644 pooled .a 1804 to 2130 1 to 327     Submitted on the opposite strand 327/327
(100 %)
4 diff
(98.8 %id)
AW614424 Kidney .c 450 to 1239 2 to 787   tiling clone,   786/786
(100 %)
8 diff
(99.0 %id)
DB069891 testis .c 2097 to 2603 508 to 1   tiling clone, capped   508/508
(100 %)
10 diff
(98.1 %id)
DB340067 testis .a 260 to 756 2 to 499       498/498
(100 %)
2 diff
(99.6 %id)
BP295405   .a 1067 to 1647 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
BP298288   .d 2038 to 2401 1 to 363   AAA   363/363
(100 %)
2 diff
(99.5 %id)
NM_145648.3   .a 6 to 2794 1 to 2789 exact RefSeq,   2789/2789
(100 %)
0 diff
(100 %id)
DA731279   .a 348 to 1052 2 to 710   capped   709/805
(88 %)
9 diff
(98.9 %id)
DB363397   .a 2217 to 2793 573 to 1       573/575
(99 %)
13 diff
(97.8 %id)
CV575587 cornea, eye .a 61 to 627 1 to 567       567/567
(100 %)
0 diff
(100 %id)
CV575587 cornea, eye .a 61 to 627 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BM837993 Ascites, stomach .a 636 to 1264 1 to 629       629/629
(100 %)
0 diff
(100 %id)
BM837993 Ascites, stomach .a 636 to 1264 1 to 629       629/629
(100 %)
0 diff
(100 %id)
BM794849 Ascites, stomach .a 1617 to 2227 1 to 612       612/616
(99 %)
2 diff
(99.7 %id)
BM794849 Ascites, stomach .a 1617 to 2227 1 to 612       612/616
(99 %)
2 diff
(99.7 %id)
DA940216 Spleen .h-u 1103 to 1684 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA960966 Spleen .a 239 to 569 2 to 332   capped   331/331
(100 %)
0 diff
(100 %id)
DN999430   .a 50 to 485 1 to 436       436/436
(100 %)
8 diff
(98.2 %id)
DB083822 testis .a 2162 to 2711 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
TI_154136992   .a 122 to 781 59 to 725     Submitted on the opposite strand 667/1444
(46 %)
19 diff
(98.7 %id)
TI_154145091   .d 1778 to 2402 712 to 81     Submitted on the opposite strand 632/635
(99 %)
36 diff
(94.4 %id)
TI_154145892   .a 2038 to 2731 770 to 82     Submitted on the opposite strand 689/899
(76 %)
0 diff
(100 %id)
TI_154147140   .d 1920 to 2334 494 to 80     Submitted on the opposite strand 415/419
(99 %)
1 diff
(99.8 %id)
TI_154147544   .a 1975 to 2760 862 to 80     Submitted on the opposite strand 783/829
(94 %)
49 diff
(94.1 %id)
TI_154148666   .d 1847 to 2360 599 to 81     Submitted on the opposite strand 519/599
(86 %)
0 diff
(100 %id)
TI_154154020   .a 1367 to 1994 80 to 707       628/633
(99 %)
2 diff
(99.7 %id)
TI_154195442   .a 523 to 1424 40 to 931       892/1020
(87 %)
13 diff
(98.8 %id)
TI_154196594   .a 523 to 1297 37 to 805       769/978
(78 %)
12 diff
(98.8 %id)
TI_154196978   .a 523 to 1147 44 to 668       625/986
(63 %)
9 diff
(99.1 %id)
TI_159688617   .a 1325 to 2216 952 to 71       882/1059
(83 %)
12 diff
(98.9 %id)
TI_159696407   .a 1470 to 2225 785 to 33   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 753/1018
(73 %)
11 diff
(99.0 %id)
TI_159714512   .d 1840 to 2403 64 to 627     Submitted on the opposite strand 564/1071
(52 %)
10 diff
(99.1 %id)
TI_227712346   .a 1321 to 2211 947 to 59       889/1070
(83 %)
7 diff
(99.4 %id)
TI_227712997   .a 1930 to 2796 946 to 83   AAA   864/986
(87 %)
26 diff
(97.4 %id)
DB190123 lung, tumor tissue .a 1033 to 1531 2 to 501   capped   500/500
(100 %)
2 diff
(99.6 %id)
BP366406 thymus .a 1127 to 1701 1 to 575       575/575
(100 %)
3 diff
(99.5 %id)
CF529196 placenta .d 2178 to 2401 242 to 19   AAA   224/224
(100 %)
1 diff
(99.6 %id)
CB306983 Human Lung Epithelial cells, lung .d 1847 to 2388 1 to 543     Submitted on the opposite strand 543/543
(100 %)
5 diff
(99.1 %id)
CB306983 Human Lung Epithelial cells, lung .d 1847 to 2388 1 to 543     Submitted on the opposite strand 543/543
(100 %)
5 diff
(99.1 %id)
BU609098 Human Lung Epithelial cells, lung .d 1847 to 2401 1 to 560   AAA Submitted on the opposite strand 560/560
(100 %)
4 diff
(99.3 %id)
BU609098 Human Lung Epithelial cells, lung .d 1847 to 2401 1 to 560   AAA Submitted on the opposite strand 560/560
(100 %)
4 diff
(99.3 %id)
BM702718 eye, Retina Foveal and Macular .a 1483 to 2134 1 to 651       651/651
(100 %)
1 diff
(99.9 %id)
BM702718 eye, Retina Foveal and Macular .a 1483 to 2134 1 to 651       651/651
(100 %)
1 diff
(99.9 %id)
BU729704 eye, Retina Foveal and Macular .d 1933 to 2401 487 to 19   AAA   469/469
(100 %)
1 diff
(99.8 %id)
BU729704 eye, Retina Foveal and Macular .d 1933 to 2401 487 to 19   AAA   469/469
(100 %)
1 diff
(99.8 %id)
BM664120 eye, Retina Foveal and Macular .d 2042 to 2401 378 to 19   AAA   360/360
(100 %)
1 diff
(99.8 %id)
BM664120 eye, Retina Foveal and Macular .d 2042 to 2401 378 to 19   AAA   360/360
(100 %)
1 diff
(99.8 %id)
BM712767 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1927 to 2261 1 to 336       336/344
(97 %)
2 diff
(99.5 %id)
BM712767 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1927 to 2261 1 to 336       336/344
(97 %)
2 diff
(99.5 %id)
BM718098 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1927 to 2261 1 to 336       336/344
(97 %)
2 diff
(99.5 %id)
BM718098 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1927 to 2261 1 to 336       336/344
(97 %)
2 diff
(99.5 %id)
BQ447118 Knee, Osteoarthritic Cartilage .a 2135 to 2793 678 to 19   AAA   660/660
(100 %)
3 diff
(99.6 %id)
BQ447118 Knee, Osteoarthritic Cartilage .a 2135 to 2793 678 to 19   AAA   660/660
(100 %)
3 diff
(99.6 %id)
BU623715 cell lines, Enchondroma .a 1569 to 2192 642 to 19   AAA   624/642
(97 %)
1 diff
(99.9 %id)
BU623715 cell lines, Enchondroma .a 1569 to 2192 642 to 19   AAA   624/642
(97 %)
1 diff
(99.9 %id)
CA419793 Bone, Human Chondrosarcoma Cell Line .a 1486 to 2192 723 to 19   AAA   705/705
(100 %)
3 diff
(99.6 %id)
CA419793 Bone, Human Chondrosarcoma Cell Line .a 1486 to 2192 723 to 19   AAA   705/705
(100 %)
3 diff
(99.6 %id)
BU618399 Cell Line, Chondrosarcoma .a 2090 to 2793 722 to 19   AAA   704/704
(100 %)
4 diff
(99.5 %id)
BU618399 Cell Line, Chondrosarcoma .a 2090 to 2793 722 to 19   AAA   704/704
(100 %)
4 diff
(99.5 %id)
BU618245 Cell Line, Chondrosarcoma .a 2019 to 2793 789 to 19   AAA   771/775
(99 %)
9 diff
(98.9 %id)
BU618245 Cell Line, Chondrosarcoma .a 2019 to 2793 789 to 19   AAA   771/775
(99 %)
9 diff
(98.9 %id)
BU620874 Cell Line, Chondrosarcoma .a 1660 to 2429 6 to 774     Submitted on the opposite strand 769/774
(99 %)
6 diff
(99.3 %id)
BU620874 Cell Line, Chondrosarcoma .a 1660 to 2429 6 to 774     Submitted on the opposite strand 769/774
(99 %)
6 diff
(99.3 %id)
CD368097 Alveolar Macrophage, lung .a 2011 to 2793 798 to 19   AAA   780/782
(99 %)
8 diff
(99.0 %id)
CD368097 Alveolar Macrophage, lung .a 2011 to 2793 798 to 19   AAA   780/782
(99 %)
8 diff
(99.0 %id)
CD743171 Alveolar Macrophage, lung .a 2059 to 2787 748 to 19   AAA   730/730
(100 %)
3 diff
(99.6 %id)
CD743171 Alveolar Macrophage, lung .a 2059 to 2787 748 to 19   AAA   730/730
(100 %)
3 diff
(99.6 %id)
CD367066 Alveolar Macrophage, lung .a 1436 to 2192 775 to 19   AAA   757/757
(100 %)
3 diff
(99.7 %id)
CD367066 Alveolar Macrophage, lung .a 1436 to 2192 775 to 19   AAA   757/757
(100 %)
3 diff
(99.7 %id)
CD367353 Alveolar Macrophage, lung .a 2151 to 2796 664 to 19   AAA   646/646
(100 %)
3 diff
(99.6 %id)
CD367353 Alveolar Macrophage, lung .a 2151 to 2796 664 to 19   AAA   646/646
(100 %)
3 diff
(99.6 %id)
TI_151765542   .a 1612 to 2210 100 to 698   AAA   599/1121
(53 %)
12 diff
(99.0 %id)
TI_151718922   .a 1918 to 2261 410 to 65       346/756
(45 %)
0 diff
(100 %id)
TI_151757804   .a 1918 to 2261 413 to 68       346/965
(35 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u, .i, .j, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC