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Gene SLC13A2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
88 supporting clones for gene SLC13A2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001145975.1   .a 1 to 2501 2 to 2502 exact RefSeq, AAA 2502/2502
(100 %)
0 diff
(100 %id)
AK298388 Kidney .a 92 to 2501 1 to 2410   tiling clone, 2410/2410
(100 %)
3 diff
(99.9 %id)
DC362499 Kidney .a 92 to 676 1 to 585     585/585
(100 %)
1 diff
(99.9 %id)
BX957019   .b 1 to 668 1 to 668   tiling clone, 668/668
(100 %)
0 diff
(100 %id)
U26209 Kidney .b 353 to 2299 1 to 1947 exact tiling clone, 1947/1953
(99 %)
2 diff
(99.9 %id)
AK314684 Kidney .b 354 to 2199 1 to 1846 I550V   1846/1846
(100 %)
2 diff
(99.9 %id)
NM_003984.3   .b 354 to 2708 1 to 2355 exact RefSeq, AAA 2355/2355
(100 %)
0 diff
(100 %id)
DA621882 Kidney .b 355 to 895 2 to 542   capped 541/541
(100 %)
1 diff
(99.9 %id)
CD617792   .b 370 to 560 1 to 191     191/191
(100 %)
0 diff
(100 %id)
CD617793   .b 370 to 565 198 to 4     195/198
(98 %)
0 diff
(100 %id)
CD617794   .b 370 to 1033 674 to 11     664/674
(98 %)
1 diff
(99.9 %id)
CD617795   .b 370 to 1033 1 to 663     663/670
(98 %)
6 diff
(99.2 %id)
BC096277 PCR rescued clones .b 400 to 2248 1 to 1849 exact   1849/1849
(100 %)
0 diff
(100 %id)
BC096278 PCR rescued clones .b 400 to 2248 1 to 1849 exact   1849/1849
(100 %)
0 diff
(100 %id)
BC096279 PCR rescued clones .b 400 to 2248 1 to 1849 exact   1849/1849
(100 %)
0 diff
(100 %id)
DA920072 small intestine .b 445 to 1008 2 to 565   capped 564/564
(100 %)
0 diff
(100 %id)
DA379891 thalamus .b 447 to 1103 2 to 658   capped 657/657
(100 %)
0 diff
(100 %id)
DA432556 colon .b 447 to 1038 2 to 593   capped 592/592
(100 %)
0 diff
(100 %id)
DA539415 Kidney .b 447 to 1037 2 to 592   capped 591/591
(100 %)
0 diff
(100 %id)
DA621918 Kidney .b 447 to 993 2 to 548   capped 547/547
(100 %)
1 diff
(99.9 %id)
DA629369 Kidney .b 447 to 1010 2 to 565   capped 564/564
(100 %)
0 diff
(100 %id)
DA629585 Kidney .b 447 to 1023 2 to 578   capped 577/577
(100 %)
2 diff
(99.7 %id)
DA630462 Kidney .b 447 to 1033 2 to 588   capped 587/587
(100 %)
0 diff
(100 %id)
DA630989 Kidney .b 447 to 1043 2 to 598   capped 597/597
(100 %)
0 diff
(100 %id)
DA631810 Kidney .b 447 to 1037 2 to 592   capped 591/591
(100 %)
0 diff
(100 %id)
DA631935 Kidney .b 447 to 1041 2 to 596   capped 595/595
(100 %)
0 diff
(100 %id)
DA632152 Kidney .b 447 to 1010 2 to 565   capped 564/564
(100 %)
1 diff
(99.9 %id)
DA633369 Kidney .b 447 to 1035 2 to 590   capped 589/589
(100 %)
0 diff
(100 %id)
DA634131 Kidney .b 447 to 1047 2 to 601   capped 600/601
(99 %)
2 diff
(99.7 %id)
DA634754 Kidney .b 447 to 1023 2 to 578   capped 577/577
(100 %)
1 diff
(99.9 %id)
DA634944 Kidney .b 447 to 1032 2 to 587   capped 586/586
(100 %)
1 diff
(99.9 %id)
DA635074 Kidney .b 447 to 1019 2 to 574   capped 573/573
(100 %)
0 diff
(100 %id)
DA635654 Kidney .b 447 to 1033 2 to 588   capped 587/587
(100 %)
0 diff
(100 %id)
DA916356 small intestine .b 447 to 1015 2 to 570   capped 569/569
(100 %)
1 diff
(99.9 %id)
DA918265 small intestine .b 447 to 1021 2 to 576   capped 575/575
(100 %)
0 diff
(100 %id)
DA920338 small intestine .b 447 to 1010 2 to 565   capped 564/564
(100 %)
0 diff
(100 %id)
DA921256 small intestine .b 447 to 1007 2 to 562   capped 561/561
(100 %)
1 diff
(99.9 %id)
DA921510 small intestine .b 447 to 1018 2 to 573   capped 572/572
(100 %)
0 diff
(100 %id)
DA925446 small intestine .b 447 to 1035 2 to 590   capped 589/589
(100 %)
0 diff
(100 %id)
DA928203 small intestine .b 447 to 1035 2 to 590   capped 589/589
(100 %)
1 diff
(99.9 %id)
DA928871 small intestine .b 447 to 1017 2 to 572   capped 571/571
(100 %)
0 diff
(100 %id)
DA930537 small intestine .b 447 to 1015 2 to 570   capped 569/569
(100 %)
1 diff
(99.9 %id)
DA999315 breast, tumor tissue .b 447 to 990 2 to 545   capped 544/544
(100 %)
0 diff
(100 %id)
DB196250 trachea .b 447 to 923 2 to 479   capped 478/478
(100 %)
5 diff
(99.0 %id)
DB196290 trachea .b 447 to 956 2 to 511   capped 510/510
(100 %)
0 diff
(100 %id)
DB196934 trachea .b 447 to 1032 2 to 588   capped 587/587
(100 %)
1 diff
(99.9 %id)
DB197896 trachea .b 447 to 1029 2 to 584   capped 583/583
(100 %)
0 diff
(100 %id)
DB200235 trachea .b 447 to 1004 2 to 559   capped 558/558
(100 %)
2 diff
(99.7 %id)
DB201977 trachea .b 447 to 1040 2 to 595   capped 594/594
(100 %)
0 diff
(100 %id)
DB215369 trachea .b 447 to 1006 2 to 561   capped 560/560
(100 %)
0 diff
(100 %id)
DB241672 stomach, tumor tissue .b 447 to 1000 2 to 555   capped 554/554
(100 %)
0 diff
(100 %id)
DB242716 stomach, tumor tissue .b 447 to 1017 2 to 572   capped 571/571
(100 %)
0 diff
(100 %id)
BP274362 Kidney .b 453 to 1039 1 to 587     587/587
(100 %)
0 diff
(100 %id)
BP276560 Kidney .b 453 to 1037 1 to 585     585/585
(100 %)
0 diff
(100 %id)
DA623549 Kidney .b 454 to 1001 2 to 549   capped 548/548
(100 %)
1 diff
(99.9 %id)
DA623933 Kidney .b 454 to 997 2 to 545   capped 544/544
(100 %)
1 diff
(99.9 %id)
DA625262 Kidney .b 454 to 1006 2 to 554   capped 553/553
(100 %)
2 diff
(99.7 %id)
DA625906 Kidney .b 454 to 994 2 to 543   capped 542/550
(98 %)
2 diff
(99.7 %id)
DA626269 Kidney .b 454 to 994 2 to 542   capped 541/548
(98 %)
4 diff
(99.3 %id)
DA627918 Kidney .b 454 to 981 2 to 529   capped 528/528
(100 %)
1 diff
(99.9 %id)
DA628011 Kidney .b 454 to 987 2 to 535   capped 534/534
(100 %)
3 diff
(99.5 %id)
BP275247 Kidney .b 853 to 1434 1 to 582     582/582
(100 %)
0 diff
(100 %id)
CK429895 eye, lacrimal gland .b 1000 to 1329 1 to 330     330/330
(100 %)
5 diff
(98.5 %id)
BX283772 eye, retinoblastoma .b 1730 to 2233 1 to 504     504/504
(100 %)
0 diff
(100 %id)
BE256673 eye, retinoblastoma .b 1745 to 2259 1 to 516     516/516
(100 %)
1 diff
(99.9 %id)
BE252472 eye, retinoblastoma .b 1745 to 2274 1 to 530     530/530
(100 %)
1 diff
(99.9 %id)
BM853859 Ascites, stomach .b 1763 to 2079 1 to 317     317/317
(100 %)
1 diff
(99.7 %id)
BI761183 pooled colon, kidney, stomach .b 1844 to 2574 1 to 732   tiling clone, 732/732
(100 %)
3 diff
(99.6 %id)
TI_57146658   .b 1844 to 2574 63 to 794     732/794
(92 %)
9 diff
(98.9 %id)
AI057450 liver and spleen .b 2330 to 2708 379 to 1   tiling clone, 379/379
(100 %)
0 diff
(100 %id)
AW136060   .b 2394 to 2708 333 to 18   AAA 316/323
(97 %)
18 diff
(94.5 %id)
AA603049 normal prostate, Prostate .b 2465 to 2711 247 to 2   tiling clone, 246/247
(99 %)
0 diff
(100 %id)
AW024214 Kidney .b 2470 to 2708 268 to 30   AAA 239/239
(100 %)
7 diff
(97.1 %id)
NM_001145976.1   .c 1 to 2225 2 to 2226 exact RefSeq, AAA 2226/2226
(100 %)
0 diff
(100 %id)
DB204108 trachea .c 93 to 622 2 to 531   tiling clone, capped 530/530
(100 %)
0 diff
(100 %id)
NR_027384.1   .d 1 to 2495 2 to 2496 exact RefSeq, tiling clone, AAA 2496/2496
(100 %)
0 diff
(100 %id)
BX483660   .d 91 to 712 16 to 637     622/637
(97 %)
7 diff
(99.0 %id)
AK303909 trachea .d 92 to 2411 1 to 2320 I506V   2320/2320
(100 %)
2 diff
(100.0 %id)
DA630667 Kidney .d 93 to 675 2 to 584   capped 583/583
(100 %)
0 diff
(100 %id)
DB201665 trachea .d 93 to 705 2 to 614   capped 613/613
(100 %)
1 diff
(99.9 %id)
DB207735 trachea .d 93 to 470 2 to 379   capped 378/378
(100 %)
1 diff
(99.8 %id)
BP277166 Kidney .d 99 to 673 1 to 575     575/575
(100 %)
1 diff
(99.9 %id)
DA627736 Kidney .d 100 to 653 2 to 555   capped 554/554
(100 %)
1 diff
(99.9 %id)
AK091926 Kidney .e 1 to 2466 1 to 2466 I479V tiling clone, available from FLJ, 2466/2466
(100 %)
3 diff
(99.9 %id)
DA632234 Kidney .e 2 to 594 2 to 594   capped 593/593
(100 %)
2 diff
(99.7 %id)
DB320886 Kidney .e 1918 to 2466 550 to 1     550/550
(100 %)
1 diff
(99.9 %id)
BC096276 PCR rescued clones .f 1 to 2217 1 to 2218 L308S G309W W310L N312Q L313F ... tiling clone, 2218/2218
(100 %)
1 diff
(100.0 %id)
AK303936 trachea .g 1 to 1230 1 to 1230 exact tiling clone, 1230/1230
(100 %)
0 diff
(100 %id)
DC388891 small intestine .h 1 to 575 1 to 575 exact tiling clone, 575/575
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C