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Gene SLC12A5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
216 supporting clones for gene SLC12A5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF194708 fibrotheoma, ovary .a 1 to 492 488 to 1   tiling clone,   488/488
(100 %)
3 diff
(99.4 %id)
NM_001134771.1   .a 436 to 6476 1 to 6041 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 6041/6041
(100 %)
2 diff
(100.0 %id)
DA102113 cerebellum .a 437 to 987 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA328785 hippocampus .a 475 to 1034 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
TI_1752769370   .a 1000 to 2149 16 to 1170   tiling clone,   1155/1300
(88 %)
26 diff
(98.0 %id)
TI_1752769382   .a 1000 to 2133 14 to 1155       1140/1262
(90 %)
26 diff
(98.0 %id)
DA332747 hippocampus .a 1128 to 1714 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA226463 brain .a 1188 to 1846 2 to 661   capped   660/660
(100 %)
8 diff
(98.8 %id)
CD630351   .a 1206 to 1889 698 to 19       680/698
(97 %)
7 diff
(99.0 %id)
AK295900 hippocampus .a 1222 to 4042 1 to 2821   tiling clone,   2821/2821
(100 %)
3 diff
(99.9 %id)
DC336314 hippocampus .a 1222 to 1797 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
AA020732 eye, retina .a 1572 to 2123 1 to 549       549/550
(99 %)
16 diff
(97.1 %id)
DA312190 hippocampus .a 1599 to 2133 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA237444 brain .a 1633 to 2142 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
TI_1752769366   .a 1768 to 2470 95 to 795       701/797
(87 %)
40 diff
(95.0 %id)
DA109531 cerebellum .a 1778 to 2367 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
H85788 eye, retina .a 1795 to 1915 1 to 121       121/121
(100 %)
0 diff
(100 %id)
DA105618 cerebellum .a 1817 to 2075 2 to 261   capped   260/260
(100 %)
1 diff
(99.7 %id)
TI_57243857   .a 1845 to 2488 32 to 674       643/674
(95 %)
12 diff
(98.3 %id)
BI917742 brain .a 1850 to 2313 1 to 463       463/463
(100 %)
1 diff
(99.8 %id)
H92358 eye, retina .a 1886 to 2173 1 to 289       289/289
(100 %)
11 diff
(96.2 %id)
AA011147 eye, retina .a 1939 to 2132 7 to 203       197/203
(97 %)
6 diff
(97.1 %id)
AA019790 eye, retina .a 1947 to 2425 1 to 481       479/485
(98 %)
18 diff
(96.3 %id)
DA092448 cerebellum .a 1988 to 2259 2 to 273   capped   272/272
(100 %)
0 diff
(100 %id)
R84351 eye, retina .a 1994 to 2394 1 to 406       406/409
(99 %)
14 diff
(96.6 %id)
DA095727 cerebellum .a 2037 to 2596 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
TI_1752769360   .a 2059 to 3128 14 to 1087       1074/1099
(97 %)
36 diff
(96.8 %id)
DA096475 cerebellum .a 2289 to 2834 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
AA788885 schizophrenic brain S-11 frontal lobe .a 2366 to 2797 1 to 432     Submitted on the opposite strand 432/432
(100 %)
2 diff
(99.6 %id)
DA099807 cerebellum .a 2394 to 2955 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
DA290493 hippocampus .a 2460 to 2952 2 to 495   capped   494/494
(100 %)
4 diff
(99.2 %id)
DA098672 cerebellum .a 2477 to 3026 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DA189171 amygdala .a 2588 to 3017 2 to 431   capped   430/430
(100 %)
3 diff
(99.4 %id)
DA186028 amygdala .a 2650 to 3179 2 to 531   capped   530/530
(100 %)
1 diff
(99.9 %id)
DA185230 amygdala .a 2691 to 3227 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA405872 thalamus .a 2723 to 3240 2 to 519   tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
DA228408 brain .a 2913 to 3472 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA102172 cerebellum .a 2930 to 3524 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
H50200 brain .a 2940 to 3349 1 to 413       413/413
(100 %)
5 diff
(98.8 %id)
DA069561 cerebellum .a 3018 to 3588 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA126725 cerebellum .a 3018 to 3604 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
AA322772 brain, cerebellum .a 3058 to 3360 1 to 303       303/303
(100 %)
0 diff
(100 %id)
DB169121 kidney, tumor tissue .a 3077 to 3625 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
TI_154001831   .a 3228 to 3919 725 to 34       692/1004
(68 %)
6 diff
(99.5 %id)
DA300000 hippocampus .a 3328 to 3897 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
AA054632 eye, retina .a 3335 to 3833 502 to 1       502/503
(99 %)
12 diff
(97.7 %id)
TI_151808680   .a 3365 to 3919 78 to 633       556/1040
(53 %)
10 diff
(99.1 %id)
AA019639 eye, retina .a 3398 to 3833 438 to 1       438/441
(99 %)
8 diff
(98.2 %id)
DA407045 thalamus .a 3400 to 3936 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
TI_1752769374   .a 3402 to 4390 13 to 1001       989/1004
(98 %)
15 diff
(98.6 %id)
TI_151730408   .a 3411 to 3919 545 to 37       509/1091
(46 %)
0 diff
(100 %id)
G65726   .a 3441 to 3774 336 to 1     Submitted on the opposite strand 336/336
(100 %)
4 diff
(98.9 %id)
AA010975 eye, retina .a 3441 to 3833 393 to 1       393/393
(100 %)
3 diff
(99.3 %id)
H50201 brain .a 3489 to 3833 348 to 1       348/359
(96 %)
7 diff
(98.1 %id)
H92304 eye, retina .a 3518 to 3833 321 to 1       321/325
(98 %)
7 diff
(97.9 %id)
AA047222 eye, retina .a 3529 to 3833 305 to 1       305/310
(98 %)
8 diff
(97.5 %id)
AA053950 eye, retina .a 3537 to 3833 304 to 1       304/335
(90 %)
9 diff
(97.4 %id)
H84882 eye, retina .a 3559 to 3833 274 to 1       274/274
(100 %)
1 diff
(99.7 %id)
AA020733 eye, retina .a 3581 to 3833 260 to 1       260/268
(97 %)
16 diff
(94.1 %id)
BQ187832 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3600 to 3899 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
TI_1752769378   .a 3651 to 4637 12 to 1001       990/1007
(98 %)
23 diff
(97.8 %id)
TI_1752769368   .a 3655 to 4765 15 to 1138   tiling clone,   1124/1163
(96 %)
35 diff
(97.0 %id)
BM725637 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3709 to 3899 1 to 191       191/191
(100 %)
0 diff
(100 %id)
DB168908 kidney, tumor tissue .a 3733 to 4230 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
AA002143 eye, retina .a 3900 to 4402 1 to 502     Submitted on the opposite strand 502/504
(99 %)
11 diff
(97.9 %id)
H84419 eye, retina .a 3939 to 4271 1 to 329     Submitted on the opposite strand 329/329
(100 %)
9 diff
(97.3 %id)
H84293 eye, retina .a 3947 to 4257 1 to 309     Submitted on the opposite strand 309/309
(100 %)
5 diff
(98.4 %id)
TI_57220788   .a 4043 to 4864 32 to 856       825/898
(91 %)
16 diff
(98.3 %id)
BI758196 brain .a 4047 to 4864 1 to 821       821/863
(95 %)
14 diff
(98.4 %id)
BP361659 thalamus .a 4125 to 4701 1 to 577       577/582
(99 %)
7 diff
(98.8 %id)
TI_1752769372   .a 4204 to 4939 23 to 757       735/761
(96 %)
3 diff
(99.7 %id)
AA167670   .a 4239 to 4851 1 to 606       606/609
(99 %)
11 diff
(98.2 %id)
DA082499 cerebellum .a 4447 to 4947 2 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
AK055066 brain .a 4451 to 6476 1 to 2026   tiling clone, available from FLJ,   2026/2035
(99 %)
4 diff
(99.9 %id)
DA197810 brain .a 4452 to 4944 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
H17985 whole brain .a 4465 to 4880 1 to 425       425/449
(94 %)
17 diff
(96.3 %id)
H17352 whole brain .a 4467 to 5032 1 to 566       566/642
(88 %)
31 diff
(95.2 %id)
DA152383 amygdala .a 4470 to 5000 39 to 569   capped   531/568
(93 %)
6 diff
(99.0 %id)
AL711911 human skeletal muscle .a 4471 to 4981 1 to 511       511/511
(100 %)
0 diff
(100 %id)
DA162787 amygdala .a 4497 to 4958 2 to 463   capped   462/462
(100 %)
2 diff
(99.6 %id)
R35354 whole brain .a 4511 to 4966 1 to 457     Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 457/457
(100 %)
12 diff
(97.4 %id)
AW905826 nervous_normal .a 4551 to 4812 262 to 1       262/272
(96 %)
5 diff
(98.2 %id)
BC036329 Brain, adult, 6 pooled whole brains .a 4552 to 6476 1 to 1925   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 1925/1925
(100 %)
1 diff
(100.0 %id)
Z43090 brain, total brain .a 4607 to 4914 1 to 308       308/308
(100 %)
0 diff
(100 %id)
TI_1752769380   .a 4618 to 4954 9 to 344       336/480
(70 %)
8 diff
(98.4 %id)
BM694104 eye, RPE and Choroid .a 4739 to 5076 1 to 337       337/343
(98 %)
3 diff
(99.2 %id)
DA139666 alzheimer cortex .a 4794 to 5312 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
R13209 whole brain .a 4890 to 5249 1 to 362       362/362
(100 %)
16 diff
(95.6 %id)
F13517 brain, total brain .a 4899 to 5176 1 to 278       278/278
(100 %)
2 diff
(99.3 %id)
U79245 brain .a 4899 to 6476 1 to 1584   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 1584/1584
(100 %)
6 diff
(99.7 %id)
R13633 whole brain .a 4900 to 5220 1 to 325       325/328
(99 %)
10 diff
(97.0 %id)
H09458 whole brain .a 4900 to 5223 1 to 327       327/327
(100 %)
7 diff
(97.9 %id)
W22014 eye, retina .a 5010 to 5538 18 to 551       534/696
(76 %)
16 diff
(97.8 %id)
BI754995 brain .a 5100 to 5985 1 to 905       905/907
(99 %)
32 diff
(96.5 %id)
TI_57216134   .a 5100 to 5985 35 to 939       905/941
(96 %)
32 diff
(96.6 %id)
BM695423 eye, optic nerve .a 5274 to 5793 1 to 520     Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 520/520
(100 %)
2 diff
(99.7 %id)
AV750287 Pituitary .a 5313 to 5736 1 to 421       421/423
(99 %)
5 diff
(98.9 %id)
H05852 whole brain .a 5321 to 5731 1 to 421       421/496
(84 %)
18 diff
(96.4 %id)
BM689577 eye, Retina Foveal and Macular .a 5409 to 5760 1 to 352     Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 352/352
(100 %)
6 diff
(98.3 %id)
BF955816 nervous_normal .a 5460 to 5621 163 to 3       161/179
(89 %)
0 diff
(100 %id)
AA326644 brain, cerebellum .a 5486 to 5820 1 to 336       336/336
(100 %)
2 diff
(99.5 %id)
BM685996 eye, Retina Foveal and Macular .a 5574 to 6113 2 to 540   fully sequenced, Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 539/540
(99 %)
7 diff
(98.8 %id)
AA322789 brain, cerebellum .a 5615 to 5931 1 to 317       317/317
(100 %)
0 diff
(100 %id)
TI_1752768968   .a 5678 to 6450 890 to 116       775/928
(83 %)
0 diff
(100 %id)
TI_1752769384   .a 5689 to 6450 1 to 761       761/971
(78 %)
8 diff
(99.2 %id)
TI_1752769362   .a 5689 to 6450 1 to 762       762/1078
(70 %)
6 diff
(99.5 %id)
BI756509 brain .a 5739 to 5984 658 to 910       885/910
(97 %)
40 diff
(95.7 %id)
TI_57216872   .a 5739 to 5984 690 to 942       885/942
(93 %)
29 diff
(97.0 %id)
TI_151770633   .a 5762 to 6476 104 to 825   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 722/723
(99 %)
6 diff
(99.2 %id)
TI_1752768974   .a 5768 to 6450 803 to 120       684/807
(84 %)
0 diff
(100 %id)
CK023825 brain/CNS, Human Brain - Cerebellar Cortex .a 5806 to 6354 1 to 549       549/550
(99 %)
5 diff
(99.1 %id)
BM729069 eye, fetal eye .a 5812 to 6360 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
BU734145 eye, Retina Foveal and Macular .a 5835 to 6476 660 to 19   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 642/642
(100 %)
2 diff
(99.7 %id)
BU728857 eye, optic nerve .a 5880 to 6476 615 to 19   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 597/597
(100 %)
2 diff
(99.7 %id)
EL954229 eyeball .a 5910 to 6303 39 to 431       393/431
(91 %)
8 diff
(98.2 %id)
DB303810 brain .a 5917 to 6476 572 to 10       563/572
(98 %)
0 diff
(100 %id)
BM689499 eye, Retina Foveal and Macular .a 5931 to 6426 9 to 504       496/504
(98 %)
1 diff
(99.9 %id)
AI598166 anaplastic oligodendroglioma, brain .a 5988 to 6476 493 to 5       489/493
(99 %)
0 diff
(100 %id)
BM661553 eye, Retina Foveal and Macular .a 6002 to 6476 493 to 19   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 475/475
(100 %)
1 diff
(99.8 %id)
TI_151745387   .a 6003 to 6476 585 to 109   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 477/1072
(44 %)
6 diff
(99.5 %id)
H17324 whole brain .a 6014 to 6473 476 to 12       465/476
(97 %)
0 diff
(100 %id)
BX119007 whole brain .a 6043 to 6476 449 to 15   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 435/435
(100 %)
4 diff
(99.1 %id)
AI948530 anaplastic oligodendroglioma, brain .a 6044 to 6476 439 to 7       433/439
(98 %)
0 diff
(100 %id)
AA166885   .a 6065 to 6470 406 to 1       406/406
(100 %)
2 diff
(99.6 %id)
AI498839 anaplastic oligodendroglioma, brain .a 6070 to 6471 403 to 2       402/403
(99 %)
0 diff
(100 %id)
BP378795 uterus .a 6070 to 6476 1 to 407   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 407/407
(100 %)
1 diff
(99.8 %id)
BP378804 uterus .a 6070 to 6476 1 to 407   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 407/407
(100 %)
4 diff
(99.1 %id)
BP378819 uterus .a 6070 to 6476 1 to 407   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 407/407
(100 %)
1 diff
(99.8 %id)
BP378823 uterus .a 6070 to 6476 1 to 407   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 407/407
(100 %)
1 diff
(99.8 %id)
BP378858 uterus .a 6070 to 6476 1 to 407   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 407/407
(100 %)
3 diff
(99.3 %id)
R49015 whole brain .a 6080 to 6474 417 to 13   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 405/460
(88 %)
24 diff
(94.8 %id)
BM663641 eye, Retina Foveal and Macular .a 6083 to 6476 411 to 18   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 394/394
(100 %)
1 diff
(99.8 %id)
AA018434 eye, retina .a 6104 to 6454 354 to 1     Submitted on the opposite strand 354/355
(99 %)
8 diff
(97.8 %id)
H09108 whole brain .a 6125 to 6476 366 to 10       357/413
(86 %)
0 diff
(100 %id)
H84418 eye, retina .a 6157 to 6439 284 to 1     Submitted on the opposite strand 284/286
(99 %)
5 diff
(98.3 %id)
AA708345 pineal gland .a 6158 to 6476 318 to 1       318/318
(100 %)
2 diff
(99.4 %id)
R38486 whole brain .a 6159 to 6476 329 to 10       320/329
(97 %)
0 diff
(100 %id)
AW205512   .a 6159 to 6476 335 to 18   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 318/318
(100 %)
5 diff
(98.5 %id)
R38368 whole brain .a 6165 to 6476 325 to 8       318/333
(95 %)
0 diff
(100 %id)
H84292 eye, retina .a 6165 to 6474 312 to 1     Submitted on the opposite strand 312/319
(97 %)
5 diff
(98.5 %id)
AW612146 carcinoid, lung .a 6177 to 6476 305 to 4       302/305
(99 %)
0 diff
(100 %id)
F10893 brain, total brain .a 6220 to 6476 257 to 1       257/257
(100 %)
1 diff
(99.7 %id)
TI_1752768964   .a 6285 to 6450 285 to 120       166/285
(58 %)
0 diff
(100 %id)
Z39181 brain, total brain .a 6298 to 6476 179 to 1       179/179
(100 %)
2 diff
(98.9 %id)
C20755   .a 6322 to 6476 1 to 155       155/155
(100 %)
1 diff
(99.4 %id)
DC320473 brain .b -10 to 347 1 to 359       359/359
(100 %)
2 diff
(99.5 %id)
NM_020708.4   .b -10 to 6048 1 to 6059 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 6059/6059
(100 %)
2 diff
(100.0 %id)
BP201267 amygdala .b -8 to 559 1 to 570       570/580
(98 %)
8 diff
(98.7 %id)
DC317479 amygdala .b -8 to 395 1 to 404       404/404
(100 %)
0 diff
(100 %id)
DC317771 amygdala .b -8 to 591 1 to 600   tiling clone,   600/600
(100 %)
0 diff
(100 %id)
DC323929 brain .b -8 to 581 1 to 590       590/590
(100 %)
0 diff
(100 %id)
DC336320 hippocampus .b -8 to 525 1 to 535       535/535
(100 %)
2 diff
(99.7 %id)
BP208432 cerebellum .b 1 to 577 2 to 578       578/578
(100 %)
2 diff
(99.7 %id)
DA242373 brain .b 1 to 571 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
BP212736 cerebrum .b 4 to 412 1 to 409       409/582
(70 %)
9 diff
(98.5 %id)
BI823989 pooled brain, lung, testis .b 7 to 711 1 to 705       705/705
(100 %)
5 diff
(99.3 %id)
TI_57201246   .b 7 to 711 34 to 738       705/738
(95 %)
10 diff
(98.7 %id)
BM546486 brain, hippocampus .b 10 to 765 15 to 774       760/1135
(66 %)
34 diff
(97.1 %id)
DA102092 cerebellum .b 24 to 573 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA113839 cerebellum .b 24 to 573 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA190044 amygdala .b 24 to 546 2 to 525   capped   524/524
(100 %)
2 diff
(99.7 %id)
DA413342 thalamus .b 24 to 575 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA194763 amygdala .b 30 to 507 2 to 479   capped   478/478
(100 %)
0 diff
(100 %id)
AK289758 brain .b 31 to 3968 1 to 3938 S651G     3938/3938
(100 %)
3 diff
(100.0 %id)
DC321776 brain .b 31 to 544 1 to 514       514/517
(99 %)
2 diff
(99.7 %id)
DA226303 brain .b 31 to 589 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA338924 hippocampus .b 31 to 626 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DA213922 brain .b 32 to 395 2 to 365   capped   364/366
(99 %)
1 diff
(99.8 %id)
DA221620 brain .b 32 to 575 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA241310 brain .b 32 to 619 2 to 593   capped   592/592
(100 %)
5 diff
(99.2 %id)
DA331460 hippocampus .b 32 to 522 2 to 493   capped   492/492
(100 %)
1 diff
(99.8 %id)
DC342315 thalamus .b 32 to 475 1 to 447       447/451
(99 %)
5 diff
(98.9 %id)
TI_57198713   .b 38 to 600 23 to 585       563/585
(96 %)
7 diff
(98.9 %id)
BI822617 pooled brain, lung, testis .b 45 to 600 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
CD630350   .b 46 to 714 1 to 665       665/674
(98 %)
15 diff
(97.8 %id)
BP201942 amygdala .b 60 to 641 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB498146 hypothalamus .b 60 to 569 1 to 510       510/510
(100 %)
0 diff
(100 %id)
BP251292 hippocampus .b 60 to 644 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
DA318357 hippocampus .b 61 to 642 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA340436 hippocampus .b 61 to 633 2 to 574   capped   573/574
(99 %)
2 diff
(99.7 %id)
BC132668 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 65 to 6022 1 to 5958 exact tiling clone,   5958/5958
(100 %)
5 diff
(100.0 %id)
BC132670 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 65 to 6022 1 to 5958 exact tiling clone,   5958/5958
(100 %)
5 diff
(100.0 %id)
BI822202 pooled brain, lung, testis .b 84 to 866 1 to 788       788/791
(99 %)
10 diff
(98.8 %id)
TI_57199033   .b 84 to 866 62 to 849       788/852
(92 %)
18 diff
(97.9 %id)
BM921583 pooled brain, lung, testis .b 85 to 723 1 to 640       640/1121
(57 %)
10 diff
(99.2 %id)
DA323470 hippocampus .b 151 to 713 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
AF208159   .b 153 to 6042 1 to 5896 L2P tiling clone, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 5896/5896
(100 %)
17 diff
(99.8 %id)
AB033002 brain .b 175 to 3479 1 to 3305   available from KIAA,   3305/3305
(100 %)
3 diff
(100.0 %id)
AA000980 eye, retina .c 1 to 373 1 to 381   tiling clone,   381/462
(82 %)
17 diff
(96.4 %id)
AA019689 eye, retina .c 1 to 158 1 to 157   tiling clone,   157/170
(92 %)
3 diff
(98.3 %id)
AA001557 eye, retina .c 1752 to 2064 317 to 1   tiling clone,   317/492
(64 %)
11 diff
(97.8 %id)
AA019580 eye, retina .c 1937 to 2064 127 to 1       127/135
(94 %)
1 diff
(99.3 %id)
T52338 fetal spleen, Spleen .c 1965 to 2261 316 to 15   tiling clone,   302/345
(87 %)
0 diff
(100 %id)
AK098371 brain .d 1 to 1549 1 to 1549 S220P tiling clone, available from FLJ,   1549/1549
(100 %)
1 diff
(100.0 %id)
DB569236 hypothalamus .d 1087 to 1552 1 to 466     Submitted on the opposite strand 466/466
(100 %)
11 diff
(97.7 %id)
DB557494 hypothalamus .d 1113 to 1253 1 to 141     Submitted on the opposite strand 141/499
(28 %)
0 diff
(100 %id)
DB561848 hypothalamus .d 1127 to 1552 1 to 424   tiling clone, Submitted on the opposite strand 424/424
(100 %)
4 diff
(99.1 %id)
BF955540 nervous_normal .d 1335 to 1536 1 to 204       204/204
(100 %)
11 diff
(94.7 %id)
AK296331 thalamus .e 1 to 1105 1 to 1105 exact tiling clone,   1105/1105
(100 %)
0 diff
(100 %id)
BG829476 epithelioid carcinoma cell line, Pancreas .f 1 to 585 1 to 590 R12A L13W A14L P15L F16S ... tiling clone,   590/716
(82 %)
20 diff
(97.3 %id)
BP202447 amygdala .g -8 to 574 1 to 583 exact tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
BU739868 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h 1 to 400 418 to 19 P52L tiling clone, AAA   400/409
(97 %)
1 diff
(99.8 %id)
BP390737 pancreatic islet .h 115 to 396 1 to 282   tiling clone, Submitted on the opposite strand 282/285
(98 %)
3 diff
(99.0 %id)
BF956626 nervous_normal .h 144 to 286 159 to 15       145/160
(90 %)
6 diff
(96.3 %id)
AA364923 pineal body .h 167 to 400 1 to 234       234/234
(100 %)
0 diff
(100 %id)
AW963483   .h 168 to 400 1 to 233       233/378
(61 %)
1 diff
(99.8 %id)
BI035953 nervous_tumor .i 1 to 389 1 to 384 A50G L51T I52H R53Q P55S ... tiling clone,   384/387
(99 %)
13 diff
(96.7 %id)
DA339600 hippocampus .j 1 to 570 2 to 572 exact tiling clone, capped   571/571
(100 %)
1 diff
(99.9 %id)
H84860 eye, retina .k 1 to 356 10 to 363 S2X D11M G12X T13S P14Y ... tiling clone,   354/367
(96 %)
10 diff
(97.3 %id)
BQ896172 brain, neuroblastoma, cell line .l 1 to 396 1 to 396 exact tiling clone, AAA   396/396
(100 %)
0 diff
(100 %id)
BE182774 head_neck .l 175 to 348 200 to 28     Submitted on the opposite strand 173/200
(86 %)
0 diff
(100 %id)
C21461   .l 197 to 396 1 to 200       200/200
(100 %)
1 diff
(99.5 %id)
AI223167   .m 1 to 248 1 to 248 exact tiling clone, Submitted on the opposite strand 248/248
(100 %)
1 diff
(99.6 %id)
DA236345 brain .n 1 to 456 115 to 570   tiling clone, capped   456/569
(80 %)
6 diff
(99.0 %id)
DA233354 brain .n 89 to 654 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DA524232 brain .n 138 to 659 2 to 524   tiling clone, capped   523/523
(100 %)
1 diff
(99.9 %id)
AK294059 cerebellum Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
AK295096 brain Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
DB299702 cerebellum Gene SLC12A5, variant not shown              
DA108717 cerebellum Gene SLC12A5, variant not shown       capped      
DB299763 cerebellum Gene SLC12A5, variant not shown         This clone was ignored    
DA109339 cerebellum Gene SLC12A5, variant not shown       capped This clone was ignored    
DC310960 cerebellum Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
DA231388 brain Gene SLC12A5, variant not shown       capped      
DC324458 brain Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
AV726683 hypothalamus Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
AV731150 hypothalamus Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
H40698 eye, retina Gene SLC12A5, variant not shown         This clone was ignored    
AA057247 eye, retina Gene SLC12A5, variant not shown              
AA058695 eye, retina Gene SLC12A5, variant not shown              
BI913733 brain Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
TI_57241358   Gene SLC12A5, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C