cDNA accession Links to the sequence |
Tissue most 5' clones in red |
Match mRNA |
From bp to bp in mRNA |
From bp to bp in accs. |
Clone encodes complete protein (with AA variation) |
Features | Anomalies detected by AceView |
Accession match over (% length) |
Base differences relative to genome (% identity) |
AK025833 | .e | 904 to 2581 | 1 to 1678 | tiling clone, available from FLJ, AAA | Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) | 1678/1678 (100 %) | 1 diff (100.0 %id) | ||
AK092746 | small intestine | .e | 1 to 2374 | 2 to 2375 | exact | tiling clone, available from FLJ, | 2375/2375 (100 %) | 1 diff (100.0 %id) | |
AK172835 | .a | 69 to 1573 | 1 to 1505 | exact | tiling clone, available from FLJ, AAA | 1505/1505 (100 %) | 1 diff (100.0 %id) | ||
AK290400 | cord Blood | .a | 215 to 1216 | 1 to 1002 | exact | 1002/1002 (100 %) | 0 diff (100 %id) | ||
AK290402 | cord Blood | .a | 205 to 1287 | 1 to 1083 | exact | 1083/1083 (100 %) | 0 diff (100 %id) | ||
AK301189 | Spleen | .c | 10 to 1063 | 1 to 1054 | exact | tiling clone, | 1054/1054 (100 %) | 0 diff (100 %id) | |
DC299128 | .a | 1 to 552 | 1 to 552 | tiling clone, | 552/552 (100 %) | 0 diff (100 %id) | |||
DA032394 | .a | 165 to 583 | 2 to 420 | capped | 419/419 (100 %) | 0 diff (100 %id) | |||
AX747704 | .e | 1 to 2374 | 2 to 2375 | exact | 2375/2375 (100 %) | 1 diff (100.0 %id) | |||
BE062674 | breast | .d | 300 to 535 | 19 to 259 | tiling clone, | 241/270 (89 %) | 14 diff (94.9 %id) | ||
DA050291 | .a | 206 to 777 | 2 to 573 | capped | 572/572 (100 %) | 0 diff (100 %id) | |||
DA051193 | .a | 214 to 551 | 2 to 339 | capped | 338/338 (100 %) | 0 diff (100 %id) | |||
DC301910 | .c | 1 to 350 | 1 to 350 | tiling clone, | 350/351 (99 %) | 2 diff (99.5 %id) | |||
DA467808 | cord Blood | .a | 216 to 787 | 2 to 573 | capped | 572/572 (100 %) | 0 diff (100 %id) | ||
DC297202 | cord Blood | .a | 205 to 774 | 1 to 570 | 570/570 (100 %) | 0 diff (100 %id) | |||
DC297213 | .a | 33 to 330 | 1 to 298 | 298/298 (100 %) | 0 diff (100 %id) | ||||
DA468095 | .a | 206 to 582 | 2 to 379 | capped | 378/378 (100 %) | 1 diff (99.8 %id) | |||
DC297323 | .a | 54 to 604 | 1 to 551 | 551/551 (100 %) | 0 diff (100 %id) | ||||
DA471942 | .a | 206 to 687 | 2 to 484 | capped | 483/483 (100 %) | 1 diff (99.8 %id) | |||
DC355229 | .a | 59 to 552 | 1 to 495 | 495/495 (100 %) | 1 diff (99.8 %id) | ||||
AW769853 | lymph node, lymphoma, follicular mixed small and largecell | .e | 657 to 1055 | 401 to 3 | 399/401 (99 %) | 0 diff (100 %id) | |||
BU174116 | ductal carcinoma, cell line, Pancreas | .b | 1 to 893 | 1 to 902 | exact | tiling clone, | 902/1064 (84 %) | 25 diff (97.7 %id) | |
AY971516 | .a | 80 to 1573 | 1 to 1494 | S178G P202Q F273L | AAA | 1494/1494 (100 %) | 3 diff (99.8 %id) | ||
NM_213602.2 | .a | 69 to 1573 | 1 to 1505 | exact | RefSeq, AAA | 1505/1505 (100 %) | 0 diff (100 %id) | ||
DA917151 | small intestine | .e | 1 to 566 | 2 to 567 | capped | 566/566 (100 %) | 1 diff (99.9 %id) | ||
DB331744 | small intestine | .e | 1834 to 2374 | 543 to 1 | 543/543 (100 %) | 2 diff (99.7 %id) | |||
DC390769 | Spleen | .c | 10 to 564 | 1 to 559 | 559/559 (100 %) | 4 diff (99.3 %id) | |||
DB004067 | breast, tumor tissue | .a | 729 to 1266 | 2 to 539 | capped | 538/538 (100 %) | 0 diff (100 %id) | ||
BQ773037 | Chondrosarcoma Cell line | .a | 894 to 1573 | 697 to 19 | AAA | 679/680 (99 %) | 2 diff (99.8 %id) | ||
BU621715 | cell lines, Chondrosarcoma | .a | 842 to 1573 | 747 to 19 | AAA | 729/729 (100 %) | 8 diff (99.0 %id) | ||
BU634236 | cell lines, Chondrosarcoma | .d | 1 to 674 | 692 to 19 | A139V | tiling clone, AAA | 674/674 (100 %) | 3 diff (99.6 %id) | |
AK095432 | .a | 842 to 1573 | 747 to 19 | available from FLJ, | Suspected internal deletion, this clone was ignored | 729/729 (100 %) | 8 diff (99.0 %id) | ||
DA464653 | .a | 842 to 1573 | 747 to 19 | capped | Suspected internal deletion, this clone was ignored | 729/729 (100 %) | 8 diff (99.0 %id) | ||
DA471400 | .d | 1 to 674 | 692 to 19 | tiling clone, capped | Suspected internal deletion, this clone was ignored | 674/674 (100 %) | 3 diff (99.6 %id) | ||
BM808284 | amelanotic melanoma, cell line, skin | .d | 1 to 674 | 692 to 19 | tiling clone, | This clone was ignored | 674/674 (100 %) | 3 diff (99.6 %id) | |
BM916833 | amelanotic melanoma, cell line, skin | Gene SIGLEC15, variant not shown | This clone was ignored | ||||||
BM423379 | amelanotic melanoma, cell line, skin | Gene SIGLEC15, variant not shown | This clone was ignored |
? | Gene Summary | Gene on genome | mRNA:.a, .b, .c, .d, .e | Alternative mRNAs features, proteins, introns, exons, sequences | Expression Tissue | Function, regulation, related genes C |