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Gene ST8SIA2andC15orf32TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
72 supporting clones for gene ST8SIA2andC15orf32 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX332688 Neuroblastoma Cot 25-normalized .a 1 to 958 1 to 956   tiling clone,   956/959
(99 %)
12 diff
(98.8 %id)
DR000431 fetal brain .a 60 to 688 9 to 637       629/637
(98 %)
6 diff
(99.1 %id)
AI879005 brain, frontal lobe .a 83 to 745 1 to 660       660/665
(99 %)
7 diff
(99.0 %id)
AW163487 brain, frontal lobe .a 83 to 656 1 to 575       575/617
(93 %)
31 diff
(95.0 %id)
NM_006011.3   .a 83 to 5708 1 to 5626   RefSeq,   5626/5626
(100 %)
0 diff
(100 %id)
DA489344 brain .a 85 to 647 2 to 566   capped   565/566
(99 %)
3 diff
(99.5 %id)
DA769539 brain .a 128 to 543 2 to 417   capped   416/416
(100 %)
0 diff
(100 %id)
AK313924 brain .a 135 to 1365 1 to 1231   tiling clone,   1231/1231
(100 %)
0 diff
(100 %id)
DA500080 brain .a 136 to 665 2 to 531   capped   530/530
(100 %)
0 diff
(100 %id)
DA489852 brain .a 138 to 627 2 to 493   capped   492/492
(100 %)
5 diff
(99.0 %id)
CN265415 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 141 to 331 190 to 1     Submitted on the opposite strand 190/190
(100 %)
3 diff
(98.5 %id)
AH005107   .a 211 to 1365 1 to 1153       1153/1153
(100 %)
4 diff
(99.7 %id)
U82762 brain .a 211 to 1365 1 to 1153       1153/1153
(100 %)
4 diff
(99.7 %id)
BC096202 PCR rescued clones .a 214 to 1365 1 to 1152       1152/1152
(100 %)
2 diff
(99.9 %id)
BC096203 PCR rescued clones .a 214 to 1365 1 to 1152       1152/1152
(100 %)
0 diff
(100 %id)
BC096204 PCR rescued clones .a 214 to 1365 1 to 1152       1152/1152
(100 %)
0 diff
(100 %id)
BC069584 PCR rescued clones .a 214 to 1364 1 to 1151   available from MGC,   1151/1151
(100 %)
0 diff
(100 %id)
U33551 small cell lung carcinoma .a 238 to 1365 1 to 1128       1128/1128
(100 %)
0 diff
(100 %id)
AL539806 brain, fetal brain .a 253 to 1304 1 to 1042       1042/1062
(98 %)
20 diff
(98.2 %id)
DA510306 brain .a 328 to 912 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
T07570   .a 361 to 655 1 to 295       295/295
(100 %)
1 diff
(99.7 %id)
DR763079 embryonic stem .a 375 to 1267 1 to 893       893/893
(100 %)
0 diff
(100 %id)
DA792594 brain .a 424 to 993 2 to 572   capped   571/572
(99 %)
2 diff
(99.7 %id)
BX283248 brain, neuroblastoma, cell line .a 467 to 815 1 to 349       349/349
(100 %)
1 diff
(99.8 %id)
H19110 whole brain .a 619 to 1087 1 to 478       478/496
(96 %)
18 diff
(96.4 %id)
R19239 whole brain .a 620 to 1013 1 to 408       408/488
(83 %)
17 diff
(96.6 %id)
L29556 brain .a 697 to 1367 1 to 671       671/672
(99 %)
11 diff
(98.4 %id)
AA488160 whole brain .a 764 to 1224 1 to 460       460/460
(100 %)
1 diff
(99.8 %id)
BX410060 brain, fetal brain .a 1074 to 1961 1 to 880   tiling clone,   880/880
(100 %)
16 diff
(98.2 %id)
BX332687 Neuroblastoma Cot 25-normalized .a 1391 to 2369 977 to 1   tiling clone,   977/980
(99 %)
4 diff
(99.6 %id)
BM699174 eye, fetal eyes .a 1543 to 2011 1 to 469     Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 469/469
(100 %)
0 diff
(100 %id)
H19111 whole brain .a 1814 to 2202 408 to 12   AAA   397/397
(100 %)
13 diff
(96.8 %id)
R44503 whole brain .a 1845 to 2202 382 to 11   AAA   372/375
(99 %)
15 diff
(96.0 %id)
CN284010 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2185 to 2898 1 to 714   tiling clone,   714/714
(100 %)
0 diff
(100 %id)
AW157425 brain, frontal lobe .a 2222 to 2751 530 to 1       530/530
(100 %)
0 diff
(100 %id)
BM669836 eye, fetal eyes .a 2226 to 2744 537 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 519/519
(100 %)
0 diff
(100 %id)
TI_57240657   .a 2244 to 3009 27 to 790       764/790
(96 %)
6 diff
(99.3 %id)
BI914060 brain .a 2249 to 3009 1 to 759       759/759
(100 %)
7 diff
(99.1 %id)
AI879502 brain, frontal lobe .a 2287 to 2751 465 to 1       465/465
(100 %)
0 diff
(100 %id)
BX418563 brain, fetal brain .a 2292 to 3311 1 to 1018       1018/1018
(100 %)
60 diff
(94.2 %id)
DA798524 brain .a 2373 to 2925 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA807400 brain .a 2402 to 2958 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA803593 brain .a 2416 to 2987 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
C15130   .a 2429 to 2673 1 to 245       245/245
(100 %)
0 diff
(100 %id)
DA484774 brain .a 2692 to 3256 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA802604 brain .a 2743 to 3291 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AI093905 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2751 to 3221 471 to 1       471/471
(100 %)
0 diff
(100 %id)
DA780866 brain .a 2807 to 3359 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
D60583   .a 2921 to 3223 300 to 1       300/300
(100 %)
4 diff
(98.7 %id)
AL134628 brain .a 3100 to 3651 1 to 552   tiling clone,   552/552
(100 %)
0 diff
(100 %id)
AW161242 brain, frontal lobe .b 1 to 365 8 to 372       372/372
(100 %)
2 diff
(99.5 %id)
AI815631 brain, frontal lobe .b 1 to 418 7 to 424   tiling clone,   424/424
(100 %)
1 diff
(99.8 %id)
BC096205 PCR rescued clones .b 130 to 1218 1 to 1089   tiling clone,   1089/1089
(100 %)
1 diff
(100.0 %id)
AW161777 brain, frontal lobe .b 2094 to 2593 505 to 6   tiling clone,   500/505
(99 %)
0 diff
(100 %id)
AI815907 brain, frontal lobe .b 2102 to 2607 501 to 1       501/501
(100 %)
5 diff
(99.1 %id)
BM011899 brain, neuroblastoma, cell line .c 1 to 808 1 to 805 I98X A192D Y193T S195R L196C ... tiling clone,   805/805
(100 %)
12 diff
(98.6 %id)
TI_59381081   .c 2 to 808 101 to 904 I98X A192D Y193T S195R L196C ...     804/804
(100 %)
11 diff
(98.7 %id)
DB088214 testis .d 1 to 466 2 to 467   tiling clone, capped   466/466
(100 %)
4 diff
(99.2 %id)
AK057393 testis .d 22 to 1748 1 to 1727 exact tiling clone, available from FLJ,   1727/1727
(100 %)
1 diff
(100.0 %id)
NM_153040.2   .d 23 to 1748 1 to 1726 exact RefSeq,   1726/1726
(100 %)
0 diff
(100 %id)
BC109253 PCR rescued clones .d 269 to 1473 1 to 1205 exact     1205/1205
(100 %)
2 diff
(99.9 %id)
DB022301 testis .e 1 to 531 2 to 534   tiling clone, capped   533/533
(100 %)
2 diff
(99.7 %id)
BC109252 PCR rescued clones .e 245 to 1489 1 to 1245 exact tiling clone,   1245/1247
(99 %)
1 diff
(100.0 %id)
DB336057 testis .e 1223 to 1764 543 to 1   tiling clone,   543/548
(99 %)
2 diff
(99.7 %id)
DA502974 brain .f-u 1 to 564 2 to 565   tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
AY358091   .f-u 269 to 2537 1 to 2269 exact tiling clone,   2269/2269
(100 %)
0 diff
(100 %id)
BX537981 human fetal kidney .f-u 782 to 2544 1 to 1763 exact available from DKFZ, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1763/1763
(100 %)
3 diff
(99.9 %id)
AA339648 brain .f-u 1237 to 1523 1 to 287       287/287
(100 %)
0 diff
(100 %id)
BX101574 pooled .f-u 1421 to 2163 1 to 743       743/748
(99 %)
1 diff
(99.9 %id)
BF825177 head_normal .f-u 1819 to 2039 1 to 220       220/231
(95 %)
9 diff
(96.2 %id)
BM723674 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 1831 to 2517 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
BQ189102 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 1860 to 2448 1 to 589       589/613
(96 %)
3 diff
(99.6 %id)
AL568057 brain, fetal brain .f-u 1945 to 2412 549 to 80       470/553
(84 %)
0 diff
(100 %id)
AW589904 pooled germ cell tumors .f-u 2144 to 2546 404 to 2       403/404
(99 %)
0 diff
(100 %id)
AI147060 pooled .f-u 2160 to 2546 388 to 3       386/388
(99 %)
0 diff
(100 %id)
AA906814 pooled germ cell tumors .f-u 2175 to 2546 372 to 2       371/372
(99 %)
0 diff
(100 %id)
BG152399 brain, glioblastoma without EGFR amplification .f-u 2206 to 2546 341 to 1   tiling clone,   341/341
(100 %)
2 diff
(99.5 %id)
DA797668 brain .g 1 to 467 2 to 469 A82G S84X tiling clone, capped   468/468
(100 %)
3 diff
(99.4 %id)
BF057630 pooled germ cell tumors .h 1 to 584 584 to 1 G20D tiling clone,   584/585
(99 %)
1 diff
(99.9 %id)
BX431467 brain, fetal brain Gene ST8SIA2andC15orf32, variant not shown              
DA792561 brain Gene ST8SIA2andC15orf32, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI