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Gene ST6GALNAC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
236 supporting clones for gene ST6GALNAC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA594489 lung .a 1 to 564 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB239147 trachea .a 1 to 592 2 to 593   tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
BX505872   .a 25 to 601 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
NM_018414.3   .a 26 to 2575 1 to 2550 exact RefSeq,   2550/2550
(100 %)
4 diff
(99.9 %id)
DA890470 rectum .a 28 to 589 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB244623 uterus, tumor tissue .a 30 to 576 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB047786 testis .a 46 to 604 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
AY358918   .a 55 to 2567 1 to 2513 V80A tiling clone, AAA   2513/2513
(100 %)
2 diff
(100.0 %id)
DB227593 trachea .a 65 to 632 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BP220656 colon .a 79 to 646 1 to 568       568/568
(100 %)
5 diff
(99.2 %id)
BX479896   .a 80 to 614 1 to 534       534/534
(100 %)
5 diff
(99.1 %id)
DB211022 trachea .a 80 to 627 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
CB156507 brain .a 81 to 616 1 to 536       536/536
(100 %)
0 diff
(100 %id)
BP220005 colon .a 81 to 677 1 to 597       597/597
(100 %)
3 diff
(99.5 %id)
BP220995 colon .a 81 to 665 1 to 585       585/585
(100 %)
4 diff
(99.4 %id)
AL709089 human skeletal muscle .a 81 to 618 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DT215863 brain .a 81 to 222 1 to 142       142/142
(100 %)
1 diff
(99.3 %id)
CB130001 Liver .a 81 to 618 1 to 538       538/538
(100 %)
0 diff
(100 %id)
DA935460 Spleen .a 81 to 683 2 to 604   capped   603/603
(100 %)
2 diff
(99.7 %id)
DA966806 stomach .a 81 to 632 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DB090077 testis .a 81 to 646 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA043321 bladder .a 82 to 649 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA422688 cervix .a 82 to 636 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BP224080 colon mucosa .a 82 to 534 1 to 454       454/561
(80 %)
6 diff
(99.0 %id)
DA426402 colon .a 82 to 649 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA428525 colon .a 82 to 628 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA434657 tongue, tumor tissue .a 82 to 640 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA434943 tongue, tumor tissue .a 82 to 610 2 to 530   capped   529/529
(100 %)
0 diff
(100 %id)
DA443412 tongue, tumor tissue .a 82 to 685 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA454160 tongue, tumor tissue .a 82 to 645 2 to 567   capped   566/577
(98 %)
3 diff
(99.5 %id)
DA592827 lung .a 82 to 580 2 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
CB128318 Liver .a 82 to 484 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
DA890513 rectum .a 82 to 617 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DA891510 rectum .a 82 to 511 2 to 431   capped   430/430
(100 %)
0 diff
(100 %id)
DA891879 rectum .a 82 to 630 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DA892350 rectum .a 82 to 654 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA929200 small intestine .a 82 to 652 2 to 572   capped   571/571
(100 %)
3 diff
(99.5 %id)
DA932496 Spleen .a 82 to 641 2 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DB010735 colon, tumor tissue .a 82 to 617 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB013093 esophageal, tumor tissue .a 82 to 654 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB194661 trachea .a 82 to 638 19 to 575   capped   557/557
(100 %)
0 diff
(100 %id)
DB196767 trachea .a 82 to 656 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB197893 trachea .a 82 to 646 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB199534 trachea .a 82 to 645 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB207640 trachea .a 82 to 624 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB210069 trachea .a 82 to 580 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DB210906 trachea .a 82 to 710 2 to 630   capped   629/629
(100 %)
1 diff
(99.9 %id)
DB215992 trachea .a 82 to 623 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB250927 uterus .a 82 to 638 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BP220557 colon .a 83 to 658 1 to 575       575/575
(100 %)
9 diff
(98.5 %id)
BM759365 Ascites, stomach .a 84 to 426 1 to 343       343/343
(100 %)
2 diff
(99.5 %id)
DA922509 small intestine .a 84 to 631 2 to 549   capped   548/548
(100 %)
3 diff
(99.5 %id)
BP223307 colon mucosa .a 85 to 726 1 to 643       643/643
(100 %)
23 diff
(96.5 %id)
BM742197 Ascites, stomach .a 85 to 620 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
DA960501 Spleen .a 85 to 657 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
EC532278 Prostate .a 89 to 196 1 to 107       107/107
(100 %)
6 diff
(94.4 %id)
BP352783   .a 91 to 512 1 to 422       422/425
(99 %)
5 diff
(98.9 %id)
DA481448   .a 92 to 639 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
TI_57151040   .a 105 to 960 21 to 884       864/919
(94 %)
26 diff
(97.2 %id)
AL709905 human skeletal muscle .a 113 to 744 1 to 630       630/630
(100 %)
3 diff
(99.6 %id)
BI762436 pooled colon, kidney, stomach .a 114 to 960 1 to 855       855/890
(96 %)
21 diff
(97.7 %id)
CB129689 Liver .a 114 to 484 1 to 372       372/372
(100 %)
3 diff
(99.2 %id)
DA870656 Prostate .a 115 to 612 2 to 500   capped   499/499
(100 %)
1 diff
(99.8 %id)
BM837081 Ascites, stomach .a 116 to 589 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
DB009630 colon, tumor tissue .a 118 to 674 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB191947 ovary, tumor tissue .a 119 to 670 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DB203351 trachea .a 121 to 703 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DA481253   .a 122 to 674 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DN999034 bone marrow .a 122 to 874 1 to 753       753/753
(100 %)
5 diff
(99.4 %id)
BX471106   .a 129 to 675 1 to 548       548/548
(100 %)
2 diff
(99.7 %id)
BX480126   .a 131 to 520 1 to 390       390/390
(100 %)
11 diff
(97.2 %id)
BX951360   .a 131 to 841 1 to 711       711/711
(100 %)
1 diff
(99.9 %id)
DA427917 colon .a 140 to 685 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BG702131 brain, hippocampus .a 140 to 885 1 to 746       746/746
(100 %)
7 diff
(99.1 %id)
BI551422 brain, hippocampus .a 140 to 896 1 to 759       759/765
(99 %)
11 diff
(98.6 %id)
DB245908 uterus, tumor tissue .a 140 to 692 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
BP263854 small intestine .a 142 to 721 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
TI_44169877   .a 145 to 896 90 to 843       754/849
(88 %)
12 diff
(98.6 %id)
BX480002   .a 149 to 704 5 to 560       556/560
(99 %)
8 diff
(98.6 %id)
DA305716 hippocampus .a 150 to 719 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BX477214   .a 157 to 618 1 to 463       463/463
(100 %)
12 diff
(97.5 %id)
DA932264 Spleen .a 161 to 725 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA935843 Spleen .a 161 to 728 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA945892 Spleen .a 161 to 728 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
DA279634 corpus callosum .a 163 to 744 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA937940 Spleen .a 166 to 750 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA186442 amygdala .a 168 to 728 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
DA935871 Spleen .a 175 to 770 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DB199625 trachea .a 179 to 728 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DB202146 trachea .a 179 to 749 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB229818 trachea .a 179 to 759 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB269085 uterus .a 179 to 733 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DB009690 colon, tumor tissue .a 181 to 736 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB265772 uterus .a 182 to 764 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA932126 Spleen .a 183 to 728 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB199371 trachea .a 183 to 763 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
Y11339   .a 188 to 2569 49 to 2431 exact     2383/2437
(97 %)
8 diff
(99.7 %id)
DR006353 Prostate .a 189 to 618 1 to 430       430/430
(100 %)
0 diff
(100 %id)
DA937048 Spleen .a 192 to 783 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DB273923 uterus .a 195 to 738 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
TI_57201008   .a 198 to 901 73 to 777       705/777
(90 %)
9 diff
(98.9 %id)
TI_1948131956   .a 199 to 1024 121 to 955       835/1418
(58 %)
34 diff
(97.7 %id)
TI_1948131957   .a 199 to 970 129 to 915       787/1224
(64 %)
37 diff
(97.0 %id)
TI_1948132285   .a 199 to 1026 122 to 950   AAA   829/1365
(60 %)
35 diff
(97.5 %id)
TI_1948132286   .a 199 to 936 136 to 883       748/1231
(60 %)
23 diff
(98.2 %id)
TI_1948132589   .a 199 to 1024 124 to 948       825/1468
(56 %)
26 diff
(98.3 %id)
TI_1948132590   .a 199 to 969 146 to 928       783/1236
(63 %)
26 diff
(97.9 %id)
TI_1948132900   .a 199 to 944 133 to 882       750/1202
(62 %)
30 diff
(97.6 %id)
AY096001   .a 200 to 2023 1 to 1824 exact     1824/1824
(100 %)
0 diff
(100 %id)
CV024068 mixed .a 200 to 815 1 to 616       616/616
(100 %)
1 diff
(99.9 %id)
BI824501 pooled brain, lung, testis .a 205 to 901 1 to 698       698/698
(100 %)
3 diff
(99.6 %id)
AL556596 placenta .a 209 to 1028 1 to 822       822/822
(100 %)
2 diff
(99.8 %id)
DA267318 caudate nucleus .a 220 to 787 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BI224391 cervical carcinoma cell line, cervix .a 587 to 1171 1 to 590       590/591
(99 %)
10 diff
(98.4 %id)
TI_154170215   .a 610 to 1140 80 to 610       531/531
(100 %)
1 diff
(99.9 %id)
CF140329 CNCAP(3)T-225 cell line, Prostate .a 706 to 1189 1 to 484       484/484
(100 %)
4 diff
(99.2 %id)
TI_154170755   .a 713 to 1368 88 to 745       658/994
(66 %)
6 diff
(99.4 %id)
BG984949 colon_normal .a 717 to 1112 1 to 396       396/396
(100 %)
3 diff
(99.3 %id)
BM791363 stomach .a 757 to 1421 1 to 665       665/665
(100 %)
4 diff
(99.4 %id)
BM854272 stomach .a 757 to 1199 1 to 442       442/445
(99 %)
4 diff
(99.2 %id)
AK000113 colon .a 846 to 2574 1 to 1729   available from FLJ, AAA   1729/1729
(100 %)
2 diff
(99.9 %id)
BX390706   .a 876 to 1684 1 to 813       813/896
(90 %)
33 diff
(96.4 %id)
BQ709697 Spleen .a 1212 to 2059 1 to 855       855/941
(90 %)
19 diff
(98.0 %id)
AW860233 colon .a 1251 to 1777 531 to 7       525/531
(98 %)
0 diff
(100 %id)
CB147534 Liver .a 1426 to 1931 1 to 506       506/506
(100 %)
0 diff
(100 %id)
BM797148 Ascites, stomach .a 1481 to 2033 1 to 554       554/559
(99 %)
10 diff
(98.3 %id)
BM856046 stomach .a 1490 to 1580 16 to 106       91/106
(85 %)
8 diff
(92.5 %id)
EC450569 Prostate .a 1690 to 1786 1 to 96       96/96
(100 %)
1 diff
(99.0 %id)
EC450612 Prostate .a 1690 to 1792 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC479901 Prostate .a 1690 to 1792 1 to 100       102/100
(102 %)
3 diff
(97.0 %id)
EC494554 Prostate .a 1690 to 1790 1 to 101       101/101
(100 %)
0 diff
(100 %id)
TI_154023514   .a 1691 to 2567 966 to 95   AAA   872/1127
(77 %)
40 diff
(96.5 %id)
BU190870 ductal carcinoma, cell line, Pancreas .a 1711 to 2569 1 to 862       862/869
(99 %)
11 diff
(98.8 %id)
AL120518 amygdala .a 1730 to 2574 1 to 844   fully sequenced, AAA   844/844
(100 %)
4 diff
(99.6 %id)
TI_149303473   .a 1731 to 2567 901 to 73   AAA   829/968
(85 %)
10 diff
(99.0 %id)
TI_149313464   .a 1744 to 2574 909 to 85   AAA   825/948
(87 %)
18 diff
(98.2 %id)
AL120519 amygdala .a 1774 to 2574 820 to 20   fully sequenced, AAA   801/801
(100 %)
2 diff
(99.8 %id)
AL578818 placenta .a 1797 to 2539 742 to 1       742/826
(89 %)
21 diff
(97.5 %id)
CA432681 cell lines, Chondrosarcoma .a 1797 to 2567 787 to 19   AAA   769/769
(100 %)
5 diff
(99.4 %id)
EC449054 Prostate .a 1801 to 1880 1 to 79       79/79
(100 %)
3 diff
(96.3 %id)
TI_149315756   .a 1805 to 2567 837 to 76   AAA   762/989
(77 %)
5 diff
(99.5 %id)
BU622907 cell lines, Chondrosarcoma .a 1805 to 2567 780 to 19   AAA   762/767
(99 %)
2 diff
(99.8 %id)
CB158963 Liver .a 1817 to 2413 1 to 597       597/597
(100 %)
1 diff
(99.9 %id)
BM981484 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1849 to 2567 737 to 19   AAA   719/719
(100 %)
1 diff
(99.9 %id)
CB305371 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1849 to 2574 744 to 19   AAA   726/726
(100 %)
1 diff
(99.9 %id)
CB851698 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 1849 to 2567 737 to 19   AAA   719/719
(100 %)
3 diff
(99.6 %id)
BM763727 Ascites, stomach .a 1862 to 2311 1 to 450       450/450
(100 %)
4 diff
(99.2 %id)
BM772589 Ascites, stomach .a 1862 to 2504 1 to 643       643/643
(100 %)
4 diff
(99.4 %id)
BM772622 Ascites, stomach .a 1862 to 2522 1 to 659       659/659
(100 %)
6 diff
(99.1 %id)
TI_149277713   .a 1894 to 2567 759 to 86   AAA   674/674
(100 %)
3 diff
(99.6 %id)
BU677894 lung .a 1915 to 2567 671 to 19   AAA   653/653
(100 %)
3 diff
(99.6 %id)
AA233673 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1919 to 2344 1 to 425       425/425
(100 %)
1 diff
(99.8 %id)
BX089008   .a 1921 to 2567 1 to 647   AAA   647/647
(100 %)
0 diff
(100 %id)
CB243428 Human Lung Epithelial cells, lung .a 1943 to 2573 649 to 19   AAA   631/631
(100 %)
0 diff
(100 %id)
AW167654 cervix .a 2034 to 2574 541 to 1       541/541
(100 %)
7 diff
(98.8 %id)
CA439427 lung, Metastatic Chondrosarcoma .a 2036 to 2567 549 to 19   AAA   531/531
(100 %)
2 diff
(99.7 %id)
AW517203 cervix .a 2043 to 2566 525 to 2       524/525
(99 %)
0 diff
(100 %id)
BE501325 pooled germ cell tumors .a 2071 to 2567 508 to 12   AAA   497/497
(100 %)
5 diff
(99.0 %id)
BF824758 head_normal .a 2085 to 2474 12 to 401       390/401
(97 %)
9 diff
(97.8 %id)
EC537548 Prostate .a 2091 to 2152 64 to 1       64/64
(100 %)
2 diff
(96.9 %id)
AA527075 colon .a 2100 to 2570 477 to 11   AAA   467/518
(90 %)
30 diff
(94.3 %id)
AI860695 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2101 to 2567 485 to 19   AAA   467/467
(100 %)
5 diff
(99.0 %id)
AA878120 colon, colon tumor .a 2108 to 2567 460 to 1       460/460
(100 %)
2 diff
(99.6 %id)
AI829215 adenocarcinoma, Pancreas .a 2113 to 2567 456 to 1       456/456
(100 %)
1 diff
(99.8 %id)
AW340140 pooled .a 2113 to 2576 466 to 3       464/466
(99 %)
0 diff
(100 %id)
AI687053 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2117 to 2568 452 to 1       452/453
(99 %)
7 diff
(98.5 %id)
AA824284   .a 2118 to 2569 458 to 7       452/458
(98 %)
0 diff
(100 %id)
AI858970 anaplastic oligodendroglioma, brain .a 2120 to 2567 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AI983809 adenocarcinoma, Pancreas .a 2130 to 2569 447 to 7       441/447
(98 %)
0 diff
(100 %id)
AA723802 pooled .a 2145 to 2576 434 to 2       433/434
(99 %)
0 diff
(100 %id)
BM744450 stomach .a 2156 to 2577 1 to 421   AAA   421/421
(100 %)
5 diff
(98.9 %id)
BM771560 stomach .a 2156 to 2567 1 to 412   AAA   412/412
(100 %)
1 diff
(99.8 %id)
AI910795 colon, colon tumor, RER+ .a 2157 to 2569 414 to 2       413/414
(99 %)
0 diff
(100 %id)
AW673220 cervical carcinoma cell line, cervix .a 2193 to 2567 400 to 26   AAA   375/375
(100 %)
1 diff
(99.8 %id)
AW195947 adenocarcinoma, Pancreas .a 2217 to 2567 373 to 23   AAA   351/351
(100 %)
14 diff
(96.1 %id)
AW132045 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2218 to 2558 339 to 1       339/339
(100 %)
5 diff
(98.6 %id)
AA494414 colon .a 2224 to 2567 356 to 13   AAA   344/344
(100 %)
0 diff
(100 %id)
AI289782 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2225 to 2567 367 to 25   AAA   343/343
(100 %)
0 diff
(100 %id)
AI688681 colon .a 2282 to 2560 293 to 15   AAA   279/283
(98 %)
20 diff
(93.0 %id)
AI688692 colon .a 2284 to 2574 291 to 1       291/291
(100 %)
20 diff
(93.2 %id)
AI680070 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2290 to 2574 305 to 21   AAA   285/285
(100 %)
1 diff
(99.7 %id)
AI368513 anaplastic oligodendroglioma, brain .a 2294 to 2567 273 to 1       273/273
(100 %)
1 diff
(99.7 %id)
AW439152 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2294 to 2569 278 to 2       277/278
(99 %)
0 diff
(100 %id)
DA454238 tongue, tumor tissue .a 2306 to 2574 2 to 270   capped, AAA   269/269
(100 %)
0 diff
(100 %id)
BU608564 Human Lung Epithelial cells, lung .a 2310 to 2574 283 to 19   AAA   265/274
(96 %)
0 diff
(100 %id)
BC022462 Brain, hippocampus .b 1 to 2319 1 to 2319 Q165K M379I tiling clone, available from MGC, AAA   2319/2319
(100 %)
5 diff
(99.8 %id)
TI_1948132902   .b 750 to 1470 858 to 129       730/1371
(53 %)
23 diff
(98.4 %id)
TI_1948132591   .b 756 to 1477 856 to 128       729/1368
(53 %)
43 diff
(96.9 %id)
TI_1948132901   .b 756 to 1470 850 to 122       729/1385
(52 %)
32 diff
(97.7 %id)
TI_1948131958   .b 774 to 1477 807 to 100       708/1300
(54 %)
22 diff
(98.4 %id)
TI_1948132287   .b 876 to 1459 734 to 147       588/1396
(42 %)
30 diff
(97.9 %id)
TI_1948132592   .b 886 to 1459 716 to 141       576/1358
(42 %)
5 diff
(99.7 %id)
TI_1948131959   .b 892 to 1477 708 to 123       586/1343
(43 %)
9 diff
(99.4 %id)
BM825729 Ascites, stomach .b 1019 to 1400 1 to 383   tiling clone,   383/383
(100 %)
1 diff
(99.8 %id)
BQ881952 dorsal root ganglia .c 1 to 877 30 to 907   tiling clone, available from MGC,   878/911
(96 %)
19 diff
(98.0 %id)
BC063830 Peripheral Nervous System, dorsal rootganglion .c 2 to 2654 1 to 2653   tiling clone, available from MGC, AAA   2653/2653
(100 %)
1 diff
(100.0 %id)
BP293157 lung .c 31 to 612 1 to 582   tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DA431188 colon .c 32 to 593 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA920898 small intestine .c 56 to 585 2 to 531   capped   530/530
(100 %)
2 diff
(99.7 %id)
DA943397 Spleen .c 68 to 653 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA925881 small intestine .c 111 to 694 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB226996 trachea .c 120 to 707 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA943076 Spleen .c 133 to 718 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA206954 brain .c 167 to 733 2 to 568   capped   567/567
(100 %)
4 diff
(99.3 %id)
BQ447189 Knee, Osteoarthritic Cartilage .d-u 1 to 458 462 to 3   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 460/462
(99 %)
0 diff
(100 %id)
DA446651 tongue, tumor tissue .d-u 162 to 733 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA434461 tongue, tumor tissue .d-u 219 to 735 2 to 518   capped   517/517
(100 %)
0 diff
(100 %id)
BF810963 colon_ins .d-u 333 to 758 1 to 426       426/426
(100 %)
9 diff
(97.9 %id)
BG984954 colon_normal .d-u 344 to 721 1 to 377       377/377
(100 %)
6 diff
(98.5 %id)
BG982580 colon_normal .d-u 359 to 709 1 to 351       351/351
(100 %)
0 diff
(100 %id)
BG982591 colon_normal .d-u 359 to 723 1 to 365       365/365
(100 %)
0 diff
(100 %id)
BG982660 colon_normal .d-u 359 to 782 1 to 424   tiling clone,   424/424
(100 %)
0 diff
(100 %id)
BG984953 colon_normal .d-u 359 to 730 1 to 372       372/372
(100 %)
0 diff
(100 %id)
CF139911 CNCAP(3)T-225 cell line, Prostate .d-u 475 to 881 8 to 414   tiling clone,   407/414
(98 %)
6 diff
(98.6 %id)
AK310906 trachea .e 1 to 1310 2 to 1311   tiling clone,   1311/1311
(100 %)
0 diff
(100 %id)
AW860371 colon .e 1242 to 1698 1 to 457   tiling clone,   457/457
(100 %)
3 diff
(99.4 %id)
DB056815 testis .f 1 to 532 5 to 536 S88P tiling clone, capped   535/535
(100 %)
1 diff
(99.9 %id)
BM825031 Ascites, stomach .g 1 to 667 1 to 667 exact tiling clone,   667/667
(100 %)
1 diff
(99.9 %id)
BM796857 Ascites, stomach .h 1 to 634 1 to 634 exact tiling clone,   634/634
(100 %)
7 diff
(98.9 %id)
CB851142 lung, Primary Lung Epithelial Cells .h 444 to 1006 1 to 564   tiling clone, Submitted on the opposite strand 564/572
(98 %)
6 diff
(99.0 %id)
TI_149304834   .h 450 to 1006 49 to 606     Submitted on the opposite strand 558/1091
(51 %)
3 diff
(99.8 %id)
TI_149282808   .h 485 to 1006 38 to 560   tiling clone, Submitted on the opposite strand 523/749
(69 %)
3 diff
(99.6 %id)
DB006899 cervix, tumor tissue .i 1 to 470 2 to 473 L60P A62G H63T A64C P65T ... tiling clone, capped   472/472
(100 %)
4 diff
(99.2 %id)
AW970730   .j 1 to 405 413 to -7 exact tiling clone, Submitted on the opposite strand 413/586
(70 %)
0 diff
(100 %id)
CB241906 Human Lung Epithelial cells, lung .j 4 to 414 427 to 17 exact AAA   411/475
(86 %)
0 diff
(100 %id)
AW293340   .j 9 to 416 423 to 16 exact tiling clone, AAA   408/416
(98 %)
0 diff
(100 %id)
AA524205 colon .j 23 to 414 392 to 1 exact     392/464
(84 %)
0 diff
(100 %id)
AA514491 colon .j 32 to 416 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AI858216 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .j 46 to 413 368 to 1       368/368
(100 %)
0 diff
(100 %id)
AI857575 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .j 46 to 413 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
AI337294 colon, colon tumor, RER+ .j 47 to 421 409 to 35   AAA   375/375
(100 %)
15 diff
(96.0 %id)
AA552097 colon .j 157 to 416 260 to 1       260/260
(100 %)
1 diff
(99.7 %id)
BF511247   .j 266 to 416 165 to 17   AAA   149/149
(100 %)
3 diff
(98.0 %id)
DB168017 kidney, tumor tissue .k 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
AL544554 placenta, Placenta Cot 25-normalized Gene ST6GALNAC1, variant not shown         This clone was ignored    
AL570641 placenta, Placenta Cot 25-normalized Gene ST6GALNAC1, variant not shown         This clone was ignored    
BP263036 small intestine Gene ST6GALNAC1, variant not shown         Suspected internal deletion, this clone was ignored    
BM987681 mixed Gene ST6GALNAC1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC