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Gene SHMT2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
868 representative clones for gene SHMT2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC333593 hippocampus .a 1 to 510 8 to 518   tiling clone,   518/518
(100 %)
2 diff
(99.7 %id)
NR_029416.1   .a 344 to 2519 1 to 2176 exact RefSeq, tiling clone,   2176/2176
(100 %)
0 diff
(100 %id)
DC340358 thalamus .a 400 to 937 1 to 538       538/538
(100 %)
3 diff
(99.5 %id)
AK301443 synovial membrane tissue from rheumatoidarthritis .a 401 to 2060 1 to 1660 G117R L175P     1660/1660
(100 %)
3 diff
(99.9 %id)
DC356344   .a 401 to 949 1 to 550       550/550
(100 %)
2 diff
(99.7 %id)
DC295789 synovial membrane tissue from rheumatioidarthritis .a 401 to 973 1 to 576       576/576
(100 %)
6 diff
(99.0 %id)
DC295792 synovial membrane tissue from rheumatioidarthritis .a 401 to 973 1 to 573       573/573
(100 %)
3 diff
(99.5 %id)
DC306325 cerebellum .a 402 to 971 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
DC329201 corpus callosum .a 402 to 986 1 to 586       586/586
(100 %)
1 diff
(99.9 %id)
DA638097 Liver .a 431 to 723 2 to 294   capped   293/293
(100 %)
1 diff
(99.7 %id)
DC339927 thalamus .a 432 to 969 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BE544154 cervical carcinoma cell line, cervix .a 450 to 1229 1 to 768       768/896
(85 %)
34 diff
(96.3 %id)
ES313009 beard hair, skin .a 455 to 583 1 to 129       129/129
(100 %)
0 diff
(100 %id)
DC355257   .a 463 to 942 1 to 480       480/481
(99 %)
4 diff
(99.2 %id)
DC315405 amygdala .a 466 to 858 1 to 393       393/395
(99 %)
1 diff
(99.8 %id)
DC340656 thalamus .a 466 to 1024 1 to 560       560/569
(98 %)
3 diff
(99.5 %id)
DC360055   .a 466 to 1031 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC378548   .b 1 to 569 1 to 570   tiling clone,   570/570
(100 %)
1 diff
(99.9 %id)
NR_029417.1   .b 247 to 2461 1 to 2215 exact RefSeq, tiling clone,   2215/2215
(100 %)
0 diff
(100 %id)
DC386590   .b 247 to 817 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DA772704 brain .b 355 to 928 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DC386286   .b 357 to 914 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC424925   .b 358 to 821 1 to 464       464/464
(100 %)
0 diff
(100 %id)
DC405042 thymus .b 365 to 917 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC304333 cerebellum .b 369 to 946 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC370319   .b 373 to 1183 1 to 811       811/811
(100 %)
4 diff
(99.6 %id)
DC365476   .b 378 to 887 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DC349613 brain .b 385 to 873 1 to 490       490/501
(97 %)
2 diff
(99.7 %id)
DC362044 Kidney .b 385 to 963 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DC365765   .b 385 to 930 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC378363   .b 385 to 924 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC389060 Spleen .b 385 to 952 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC389866 Spleen .b 385 to 952 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC406138 thymus .b 385 to 925 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC420372 uterus .b 385 to 963 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DA050005   .b 386 to 678 2 to 295   capped   294/294
(100 %)
1 diff
(99.7 %id)
BP872371 embryonal kidney .b 386 to 970 1 to 585       585/587
(99 %)
3 diff
(99.5 %id)
DA748435   .b 386 to 626 2 to 243   capped   242/242
(100 %)
1 diff
(99.6 %id)
DC394361 esophageal, tumor tissue .b 386 to 946 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
AU132298   .b 387 to 1107 2 to 722   capped   721/724
(99 %)
4 diff
(99.5 %id)
DA964264 stomach .b 387 to 948 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DC303541 cerebellum .b 388 to 955 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DA678429   .b 388 to 638 2 to 252   capped   251/251
(100 %)
0 diff
(100 %id)
DC392339 stomach .b 388 to 931 1 to 544       544/544
(100 %)
2 diff
(99.7 %id)
DC358356 lung .b 389 to 880 1 to 496       496/496
(100 %)
4 diff
(99.2 %id)
DC386368   .b 389 to 966 1 to 578       578/579
(99 %)
2 diff
(99.7 %id)
DA692094   .b 390 to 694 2 to 306   capped   305/305
(100 %)
0 diff
(100 %id)
DC305178 cerebellum .b 396 to 976 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC326027 caudate nucleus .b 396 to 894 1 to 499       499/499
(100 %)
0 diff
(100 %id)
AU076490   .b 396 to 502 1 to 107       107/107
(100 %)
1 diff
(99.1 %id)
DC355201   .b 396 to 954 1 to 560       560/564
(99 %)
2 diff
(99.7 %id)
DC367410   .b 396 to 924 1 to 529       529/529
(100 %)
0 diff
(100 %id)
BM755227 stomach .b 396 to 550 1 to 155       155/155
(100 %)
1 diff
(99.4 %id)
DC387620 small intestine .b 396 to 969 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
DC389778 Spleen .b 396 to 977 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BI915749 brain .b 407 to 1166 1 to 761       761/761
(100 %)
12 diff
(98.5 %id)
TI_57244190   .b 407 to 1166 35 to 795       761/795
(95 %)
16 diff
(98.0 %id)
DC386238   .b 409 to 968 1 to 560       560/560
(100 %)
0 diff
(100 %id)
AA328132   .b 413 to 695 1 to 284       284/284
(100 %)
2 diff
(99.3 %id)
DC337172 substantia nigra .b 416 to 984 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DC412909 liver, tumor tissue .b 416 to 964 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
BM829624 stomach .b 420 to 615 1 to 196       196/196
(100 %)
2 diff
(99.0 %id)
BF308769 muscle, rhabdomyosarcoma .b 425 to 1096 1 to 660       660/876
(75 %)
20 diff
(97.8 %id)
BE313720 brain, neuroblastoma .b 432 to 683 1 to 253       253/261
(96 %)
1 diff
(99.7 %id)
AA356005   .b 436 to 664 1 to 229       229/229
(100 %)
0 diff
(100 %id)
BC091501 testis .b 443 to 2460 1 to 2018   AAA   2018/2018
(100 %)
0 diff
(100 %id)
CD244165 testis .b 444 to 1233 1 to 794       794/867
(91 %)
14 diff
(98.4 %id)
DA001297   .b 451 to 661 2 to 212   capped   211/211
(100 %)
0 diff
(100 %id)
BE019252 muscle, rhabdomyosarcoma .b 455 to 651 1 to 197       197/220
(89 %)
7 diff
(96.9 %id)
BF205712 muscle, rhabdomyosarcoma .b 460 to 984 1 to 525       525/561
(93 %)
22 diff
(96.1 %id)
CF138973 CNCAP(3)T-225 cell line, Prostate .b 497 to 957 1 to 461       461/461
(100 %)
5 diff
(99.0 %id)
CF139001 CNCAP(3)T-225 cell line, Prostate .b 497 to 989 1 to 493       493/495
(99 %)
6 diff
(98.8 %id)
TI_154169135   .b 502 to 1007 78 to 583       506/507
(99 %)
2 diff
(99.7 %id)
TI_154169152   .b 502 to 1010 78 to 586       509/510
(99 %)
2 diff
(99.7 %id)
FN048519 breast carcinoma .b 550 to 636 94 to 8     Submitted on the opposite strand 87/95
(91 %)
0 diff
(100 %id)
CN395990 embryonic stem cells, cell lines H1, H7, andH9 .b 669 to 804 1 to 136       136/136
(100 %)
6 diff
(95.6 %id)
TI_59386675   .b 691 to 1481 153 to 942       790/790
(100 %)
4 diff
(99.5 %id)
TI_154169667   .b 702 to 1275 86 to 660       575/1010
(56 %)
10 diff
(99.1 %id)
CV339707 breast .b 724 to 1319 590 to 8     Submitted on the opposite strand 583/601
(97 %)
18 diff
(97.1 %id)
CU456674 epidermis .b 735 to 1210 500 to 25     Submitted on the opposite strand 476/503
(94 %)
3 diff
(99.5 %id)
BE297760 muscle, rhabdomyosarcoma .b 747 to 964 30 to 243       210/243
(86 %)
6 diff
(97.6 %id)
BE828479 lung_tumor .b 764 to 876 1 to 115       115/116
(99 %)
4 diff
(96.6 %id)
AW411250 muscle, rhabdomyosarcoma .b 776 to 1469 31 to 724       690/724
(95 %)
6 diff
(99.2 %id)
BQ706965 Spleen .b 779 to 1618 1 to 844       842/948
(88 %)
20 diff
(97.9 %id)
BQ709963 Spleen .b 779 to 1496 1 to 719       719/941
(76 %)
10 diff
(99.0 %id)
BC025355 Muscle, rhabdomyosarcoma .b 780 to 2252 1 to 1473   available from MGC, AAA   1473/1473
(100 %)
0 diff
(100 %id)
TI_44384931   .b 819 to 1497 121 to 801       681/829
(82 %)
10 diff
(98.8 %id)
BU196484 melanotic melanoma, cell line, skin .b 838 to 1659 1 to 828       828/953
(86 %)
20 diff
(98.0 %id)
BQ683990 melanotic melanoma, cell line, skin .b 838 to 1489 1 to 652       652/937
(69 %)
4 diff
(99.6 %id)
BQ676482 melanotic melanoma, cell line, skin .b 838 to 1659 1 to 825       825/882
(93 %)
14 diff
(98.5 %id)
BE257914 eye, retinoblastoma .b 848 to 1454 1 to 607       607/607
(100 %)
0 diff
(100 %id)
BE252605 eye, retinoblastoma .b 849 to 1452 1 to 604       604/604
(100 %)
0 diff
(100 %id)
EH347059   .b 900 to 960 1 to 61       61/61
(100 %)
0 diff
(100 %id)
CX760041 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 925 to 1584 1 to 658     Submitted on the opposite strand 658/852
(77 %)
7 diff
(99.2 %id)
BI333326 cervical carcinoma cell line, cervix .b 974 to 1634 1 to 661       661/661
(100 %)
0 diff
(100 %id)
BM794907 Ascites, stomach .b 982 to 1571 1 to 590       590/590
(100 %)
0 diff
(100 %id)
TI_1948134036   .b 993 to 1886 1021 to 127       895/1307
(68 %)
21 diff
(98.4 %id)
TI_1948134037   .b 994 to 1886 1016 to 128       889/1324
(67 %)
16 diff
(98.8 %id)
TI_1948134583   .b 997 to 1886 1023 to 128       896/1204
(74 %)
29 diff
(97.6 %id)
TI_1948134038   .b 999 to 1886 1010 to 128       883/1171
(75 %)
20 diff
(98.3 %id)
TI_1948135117   .b 999 to 1886 1017 to 129       889/1390
(63 %)
8 diff
(99.5 %id)
FN100460 breast carcinoma .b 1000 to 1050 1 to 50       50/50
(100 %)
1 diff
(98.0 %id)
CN485247 eye .b 1003 to 1634 1 to 632       632/632
(100 %)
0 diff
(100 %id)
BG257246 embryonal carcinoma, cell line, testis .b 1003 to 1746 1 to 744       744/1104
(67 %)
18 diff
(98.4 %id)
TI_154170990   .b 1005 to 1548 89 to 634       546/1034
(52 %)
11 diff
(99.0 %id)
TI_1948134581   .b 1006 to 1886 1012 to 127       884/1340
(65 %)
28 diff
(98.0 %id)
TI_1948133500   .b 1009 to 1886 998 to 126       873/1350
(64 %)
28 diff
(98.0 %id)
BM695515 eye, optic nerve .b 1013 to 1649 1 to 635       635/635
(100 %)
2 diff
(99.7 %id)
TI_1948133502   .b 1015 to 1886 997 to 128       870/1193
(72 %)
16 diff
(98.7 %id)
TI_1948133501   .b 1016 to 1886 1002 to 130       873/1355
(64 %)
23 diff
(98.4 %id)
BQ638998 eye, retina .b 1021 to 1631 1 to 611       611/611
(100 %)
0 diff
(100 %id)
AW410898 muscle, rhabdomyosarcoma .b 1021 to 1590 1 to 570       570/570
(100 %)
5 diff
(99.2 %id)
BG490274 large cell carcinoma, lung .b 1028 to 1646 1 to 619       619/619
(100 %)
0 diff
(100 %id)
TI_1948135118   .b 1042 to 1886 972 to 128       845/1229
(68 %)
22 diff
(98.3 %id)
CA455022   .b 1050 to 1877 1 to 833       833/885
(94 %)
6 diff
(99.4 %id)
CN395986 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1073 to 1797 4 to 728       725/728
(99 %)
7 diff
(99.1 %id)
BG751864 eye, normal pigmented retinal epithelium .b 1075 to 1962 1 to 876       878/907
(96 %)
28 diff
(97.0 %id)
BQ946161 leiomyosarcoma, uterus .b 1075 to 1871 1 to 805       805/877
(91 %)
19 diff
(97.9 %id)
BU167619 eye, retinoblastoma .b 1077 to 1927 1 to 859       859/862
(99 %)
16 diff
(98.2 %id)
EC533303 Prostate .b 1083 to 1172 1 to 90       90/90
(100 %)
0 diff
(100 %id)
TI_1948135116   .b 1089 to 1886 927 to 129       799/1355
(58 %)
5 diff
(99.7 %id)
BU170043 large cell carcinoma, lung .b 1122 to 1963 1 to 849       849/852
(99 %)
13 diff
(98.5 %id)
BU181284 large cell carcinoma, lung .b 1126 to 1977 1 to 857       857/885
(96 %)
7 diff
(99.3 %id)
FN115387 breast carcinoma .b 1135 to 1235 1 to 100       100/101
(99 %)
4 diff
(96.1 %id)
BM564630 duodenal adenocarcinoma, cell line, small intestine .b 1148 to 2052 1 to 919       919/1003
(91 %)
21 diff
(98.0 %id)
BX465022 neuroblastoma .b 1166 to 2185 1006 to 1       1006/1009
(99 %)
28 diff
(97.3 %id)
BC009320 Muscle, rhabdomyosarcoma .b 1179 to 2252 494 to 1567   AAA   1074/1518
(70 %)
6 diff
(99.7 %id)
AA410805 ovarian tumor, ovary .b 1219 to 1686 1 to 467       467/467
(100 %)
4 diff
(99.2 %id)
BM905884 leiomyosarcoma, uterus .b 1224 to 2159 1 to 945       945/1035
(91 %)
19 diff
(98.2 %id)
BX428223 neuroblastoma .b 1227 to 2222 983 to 1       983/1088
(90 %)
19 diff
(98.3 %id)
ES313988 beard hair, skin .b 1237 to 1740 1 to 505       505/505
(100 %)
2 diff
(99.7 %id)
TI_59383529   .b 1262 to 2089 98 to 928       831/832
(99 %)
6 diff
(99.3 %id)
BM725258 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1264 to 1682 1 to 419   fully sequenced,   419/419
(100 %)
0 diff
(100 %id)
BX428747 neuroblastoma .b 1275 to 2222 961 to 1       861/961
(89 %)
58 diff
(94.0 %id)
TI_1948135762   .b 1276 to 1886 740 to 124       617/1080
(57 %)
24 diff
(97.8 %id)
BG876326 colon .b 1277 to 1607 371 to 43       329/371
(88 %)
0 diff
(100 %id)
TI_154163441   .b 1321 to 1945 80 to 713       634/866
(73 %)
18 diff
(98.0 %id)
EC449461 Prostate .b 1346 to 1435 9 to 98       90/98
(91 %)
6 diff
(93.9 %id)
AL135023 melanoma (MeWo cell line) .b 1348 to 1972 626 to 2     Submitted on the opposite strand 625/626
(99 %)
1 diff
(99.9 %id)
BQ228923 embryonal carcinoma, cell line, testis .b 1348 to 2216 1 to 875       875/877
(99 %)
10 diff
(98.9 %id)
TI_154107617   .b 1396 to 2252 923 to 77   AAA   847/979
(86 %)
12 diff
(98.8 %id)
BQ304089 breast .b 1399 to 1551 24 to 176       153/190
(80 %)
6 diff
(96.9 %id)
TI_1948136111   .b 1403 to 1886 607 to 123       485/1122
(43 %)
12 diff
(99.0 %id)
TI_1948135400   .b 1411 to 1886 644 to 163       482/1337
(36 %)
12 diff
(99.2 %id)
AA361530   .b 1412 to 1678 1 to 268       268/268
(100 %)
1 diff
(99.7 %id)
BQ377280 uterus .b 1412 to 1698 1 to 287       287/295
(97 %)
1 diff
(99.7 %id)
BQ689256 ductal carcinoma, cell line, Pancreas .b 1416 to 2249 1 to 834       834/881
(94 %)
3 diff
(99.7 %id)
BG169246 hypernephroma, cell line, Kidney .b 1434 to 1634 8 to 208       201/208
(96 %)
6 diff
(97.2 %id)
TI_149300415   .b 1442 to 2252 883 to 79   AAA   805/955
(84 %)
8 diff
(99.2 %id)
TI_154109139   .b 1444 to 2252 892 to 90   AAA   803/935
(85 %)
10 diff
(99.0 %id)
TI_44458951   .b 1446 to 2179 744 to 1       744/744
(100 %)
16 diff
(97.9 %id)
BM552008 astrocytoma grade IV, cell line, brain .b 1448 to 2252 1 to 807   AAA   807/807
(100 %)
2 diff
(99.8 %id)
CN396002 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1465 to 2163 1 to 699       699/703
(99 %)
1 diff
(99.9 %id)
TI_59388793   .b 1472 to 1969 93 to 602       510/525
(97 %)
32 diff
(94.0 %id)
BQ301189 bocio_tumor .b 1494 to 1639 152 to 7       146/153
(95 %)
0 diff
(100 %id)
TI_182940160   .b 1494 to 2252 842 to 84   AAA   759/1000
(75 %)
11 diff
(98.9 %id)
BM976485 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1494 to 2252 776 to 19   AAA   758/763
(99 %)
5 diff
(99.4 %id)
TI_149286236   .b 1499 to 2252 812 to 68   AAA   745/793
(93 %)
27 diff
(96.6 %id)
BM794947 Ascites, stomach .b 1509 to 2138 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
CA447654 Chondrosarcoma, Left Pelvis .b 1530 to 2252 741 to 19   AAA   723/723
(100 %)
0 diff
(100 %id)
TI_154035828   .b 1533 to 2252 800 to 87   AAA   714/783
(91 %)
22 diff
(97.2 %id)
BG828105 muscle, rhabdomyosarcoma .b 1534 to 2248 1 to 737       647/917
(70 %)
27 diff
(97.1 %id)
BU627081 Bone, Enchondroma cell line .b 1535 to 2252 736 to 19   AAA   718/718
(100 %)
3 diff
(99.6 %id)
CA428887 Bone, Subchondral Bone .b 1538 to 2252 733 to 19   AAA   715/715
(100 %)
0 diff
(100 %id)
BM786661 Ascites, stomach .b 1544 to 2141 1 to 598       598/598
(100 %)
0 diff
(100 %id)
AA369495 placenta .b 1559 to 1745 1 to 187       187/187
(100 %)
3 diff
(98.4 %id)
CA306154 Alveolar Macrophage, lung .b 1560 to 2252 711 to 19   AAA   693/693
(100 %)
0 diff
(100 %id)
AW411251 muscle, rhabdomyosarcoma .b 1561 to 2252 718 to 27   AAA   692/692
(100 %)
0 diff
(100 %id)
BQ014954 Chondrosarcoma, Left Pubic Bone .b 1561 to 2252 712 to 19   AAA   694/694
(100 %)
2 diff
(99.8 %id)
CB240828 Human Lung Epithelial cells, lung .b 1572 to 2252 698 to 19   AAA   680/680
(100 %)
1 diff
(99.9 %id)
FN049459 breast carcinoma .b 1573 to 1623 51 to 1     Submitted on the opposite strand 51/52
(98 %)
0 diff
(100 %id)
CN395984 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1584 to 2252 1 to 669   AAA   669/669
(100 %)
1 diff
(99.9 %id)
BE926676 breast .b 1608 to 1729 15 to 135       121/135
(89 %)
7 diff
(94.9 %id)
BM677703 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1621 to 2252 650 to 19   fully sequenced, AAA   632/632
(100 %)
0 diff
(100 %id)
TI_149290316   .b 1629 to 2459 893 to 68   AAA   826/826
(100 %)
26 diff
(96.9 %id)
BE813558 breast_normal .b 1643 to 1790 160 to 14       147/160
(91 %)
0 diff
(100 %id)
BM989718 lung, Metastatic Chondrosarcoma .b 1650 to 2252 621 to 19   AAA   603/603
(100 %)
0 diff
(100 %id)
BX428222 neuroblastoma .b 1651 to 2252 591 to 1       591/721
(81 %)
19 diff
(97.4 %id)
BE019318 muscle, rhabdomyosarcoma .b 1651 to 2213 563 to 1     Submitted on the opposite strand 563/575
(97 %)
8 diff
(98.7 %id)
CN480736 Aveolar Macrophage, lung .b 1670 to 2252 601 to 19   AAA   583/583
(100 %)
0 diff
(100 %id)
AW410899 muscle, rhabdomyosarcoma .b 1681 to 2252 606 to 35   AAA   572/572
(100 %)
0 diff
(100 %id)
DC426864 thymus .b 1695 to 2252 559 to 1       559/559
(100 %)
1 diff
(99.9 %id)
BM153325 leukopheresis .b 1705 to 2252 564 to 17   AAA   548/548
(100 %)
4 diff
(99.3 %id)
DB369313   .b 1756 to 2252 498 to 1       498/564
(88 %)
4 diff
(99.3 %id)
W73762 heart .b 1799 to 2252 1 to 454   fully sequenced, AAA   454/454
(100 %)
0 diff
(100 %id)
DB531111 hippocampus .b 1806 to 2252 1 to 443     Submitted on the opposite strand 443/443
(100 %)
9 diff
(98.0 %id)
BM150987 leukopheresis .b 1824 to 2252 445 to 17   AAA   429/429
(100 %)
4 diff
(99.1 %id)
BM150812 leukopheresis .b 1827 to 2254 443 to 16   AAA   428/428
(100 %)
10 diff
(97.7 %id)
TI_151777528   .b 1829 to 2251 249 to 675       427/1427
(29 %)
9 diff
(99.4 %id)
BM151174 leukopheresis .b 1856 to 2252 413 to 17   AAA   397/397
(100 %)
1 diff
(99.8 %id)
TI_151801432   .b 1861 to 2252 96 to 485       390/492
(79 %)
7 diff
(98.6 %id)
BM150797 leukopheresis .b 1874 to 2252 395 to 17   AAA   379/379
(100 %)
9 diff
(97.7 %id)
BM150609 leukopheresis .b 1898 to 2252 371 to 17   AAA   355/355
(100 %)
8 diff
(97.8 %id)
BU728928 eye, optic nerve .b 1939 to 2451 531 to 19   AAA   513/513
(100 %)
0 diff
(100 %id)
FN101776 breast carcinoma .b 1956 to 2054 1 to 98       98/98
(100 %)
7 diff
(92.9 %id)
BM193608 leukopheresis .b 1975 to 2252 293 to 16   AAA   278/278
(100 %)
2 diff
(99.3 %id)
W73771 heart .b 2039 to 2252 210 to 1   fully sequenced,   210/210
(100 %)
0 diff
(100 %id)
FN146483 breast carcinoma .b 2113 to 2192 1 to 78       78/78
(100 %)
3 diff
(96.2 %id)
AA235484 ovarian tumor, ovary .b 2116 to 2252 137 to 1       137/137
(100 %)
0 diff
(100 %id)
FN094387 breast carcinoma .b 2124 to 2219 1 to 92       92/92
(100 %)
4 diff
(95.7 %id)
NM_005412.5   .c 1 to 2295 1 to 2295 exact RefSeq,   2295/2295
(100 %)
0 diff
(100 %id)
TI_57240955   .c 121 to 857 32 to 776   tiling clone,   745/776
(96 %)
15 diff
(98.1 %id)
DA730004   .c 122 to 853 2 to 733   capped   732/737
(99 %)
9 diff
(98.8 %id)
TI_45210954   .c 126 to 923 117 to 919       803/919
(87 %)
13 diff
(98.6 %id)
DA907951   .c 129 to 853 2 to 726   capped   725/729
(99 %)
2 diff
(99.8 %id)
CR978953 T-Lymphocytes .c 130 to 872 1 to 748       746/748
(99 %)
4 diff
(99.5 %id)
CA488001   .c 138 to 930 1 to 798       798/947
(84 %)
13 diff
(98.7 %id)
AK223555 brain .c 139 to 2086 1 to 1948 R437H AAA   1948/1948
(100 %)
1 diff
(100.0 %id)
CT001521 T-Lymphocytes .c 139 to 1025 1 to 888       888/888
(100 %)
1 diff
(99.9 %id)
BM791625 stomach .c 139 to 843 1 to 705       705/705
(100 %)
2 diff
(99.8 %id)
BM920284 pooled pancreas and spleen .c 140 to 1069 1 to 934       934/1043
(89 %)
9 diff
(99.2 %id)
AU128953   .c 140 to 828 2 to 691   capped   690/690
(100 %)
5 diff
(99.3 %id)
DA812968   .c 140 to 916 2 to 784   capped   783/847
(92 %)
12 diff
(98.6 %id)
TI_57234316   .c 141 to 911 30 to 810       781/811
(96 %)
29 diff
(96.5 %id)
TI_57220746   .c 143 to 1020 20 to 903       884/1039
(85 %)
17 diff
(98.4 %id)
BM781677 Ascites, stomach .c 144 to 841 1 to 698       698/698
(100 %)
0 diff
(100 %id)
TI_57181918   .c 146 to 923 25 to 795       771/795
(96 %)
14 diff
(98.3 %id)
BQ948999 large cell carcinoma, lung .c 148 to 1090 1 to 942       942/942
(100 %)
6 diff
(99.4 %id)
AL515998 brain, neuroblastoma, neuroblastoma cells .c 149 to 1041 1 to 893       893/893
(100 %)
0 diff
(100 %id)
TI_57145975   .c 150 to 984 59 to 887       829/887
(93 %)
12 diff
(98.7 %id)
TI_44458949   .c 150 to 929 59 to 835       777/994
(78 %)
12 diff
(98.8 %id)
AL514438.
matches multiple genes
neuroblastoma, placenta .c 151 to 1193 1 to 1036   fully sequenced, also hits gene FHL2 1036/1038
(99 %)
14 diff
(98.7 %id)
AL552273 placenta, Placenta Cot 25-normalized .c 151 to 1109 1 to 955   fully sequenced,   955/955
(100 %)
0 diff
(100 %id)
BI759953 pooled colon, kidney, stomach .c 151 to 913 1 to 763       763/763
(100 %)
0 diff
(100 %id)
BI757814 brain .c 151 to 1020 1 to 876       876/1012
(86 %)
11 diff
(99.0 %id)
TI_57147445   .c 151 to 913 74 to 836       763/836
(91 %)
6 diff
(99.3 %id)
TI_57167969   .c 151 to 1024 35 to 917       883/940
(93 %)
34 diff
(96.4 %id)
TI_57190374   .c 151 to 921 54 to 825       772/772
(100 %)
3 diff
(99.7 %id)
TI_57193141   .c 151 to 857 47 to 752       706/706
(100 %)
5 diff
(99.3 %id)
CR984030 T-Lymphocytes .c 151 to 1000 1 to 849       849/852
(99 %)
6 diff
(99.3 %id)
CT002480 T-Lymphocytes .c 151 to 917 1 to 770       770/770
(100 %)
5 diff
(99.4 %id)
CR980259 T-Lymphocytes .c 151 to 913 1 to 763       763/763
(100 %)
0 diff
(100 %id)
DA892771 skeletal muscle .c 151 to 853 2 to 704   capped   703/703
(100 %)
1 diff
(99.9 %id)
BG391570 embryonal carcinoma, cell line, testis .c 152 to 876 1 to 724       724/724
(100 %)
1 diff
(99.9 %id)
BI856407 breast, mammary adenocarcinoma, cell line .c 152 to 921 1 to 771       771/771
(100 %)
3 diff
(99.7 %id)
BM476504 lymph, lymphoma, cell line .c 152 to 928 1 to 779       779/1045
(74 %)
6 diff
(99.5 %id)
CX758918 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 152 to 923 1 to 761     Submitted on the opposite strand 761/814
(93 %)
15 diff
(98.2 %id)
TI_57221377   .c 153 to 966 66 to 882       815/882
(92 %)
24 diff
(97.3 %id)
TI_57202762   .c 154 to 967 63 to 880       818/883
(92 %)
22 diff
(97.6 %id)
BI823409 pooled brain, lung, testis .c 155 to 967 1 to 817       817/820
(99 %)
16 diff
(98.1 %id)
BQ225908 melanotic melanoma, skin .c 155 to 930 1 to 778       778/837
(92 %)
6 diff
(99.3 %id)
BX404589 neuroblastoma .c 156 to 1162 1 to 994   fully sequenced,   994/994
(100 %)
12 diff
(98.8 %id)
BM463351 embryonal carcinoma, cell line, testis .c 156 to 1144 1 to 992       992/992
(100 %)
9 diff
(99.1 %id)
BQ669006 epidermoid carcinoma, cell line, salivary gland .c 156 to 918 1 to 764       764/884
(86 %)
14 diff
(98.5 %id)
BU509838 leiomyosarcoma, uterus .c 157 to 948 1 to 796       796/899
(88 %)
4 diff
(99.6 %id)
BU167883 leiomyosarcoma, uterus .c 162 to 1045 1 to 897       895/898
(99 %)
6 diff
(99.4 %id)
BQ072012 brain, neuroblastoma, cell line .c 163 to 1174 1 to 1018       1016/1024
(99 %)
13 diff
(98.8 %id)
CR986789 T-Lymphocytes .c 164 to 918 1 to 755       755/757
(99 %)
3 diff
(99.7 %id)
BQ069560 brain, neuroblastoma, cell line .c 165 to 930 1 to 767       767/1066
(71 %)
9 diff
(99.2 %id)
BU196241 large cell carcinoma, lung .c 166 to 1001 1 to 838       838/857
(97 %)
11 diff
(98.8 %id)
AW411276 muscle, rhabdomyosarcoma .c 167 to 842 10 to 685       676/685
(98 %)
6 diff
(99.2 %id)
BE297671 muscle, rhabdomyosarcoma .c 167 to 863 37 to 736       700/786
(89 %)
16 diff
(98.0 %id)
BM479665 eye, retinoblastoma .c 167 to 1069 1 to 912       912/1021
(89 %)
10 diff
(99.1 %id)
BM464629 lymph, lymphoma, cell line .c 167 to 1064 1 to 907       907/1129
(80 %)
22 diff
(98.1 %id)
CT003844 T-Lymphocytes .c 167 to 1107 1 to 941       941/941
(100 %)
0 diff
(100 %id)
BU186959 epithelioid carcinoma, Pancreas .c 168 to 930 1 to 762       762/871
(87 %)
5 diff
(99.5 %id)
BQ950253 large cell carcinoma, lung .c 169 to 1353 1 to 942       942/943
(99 %)
15 diff
(98.5 %id)
AL514588 neuroblastoma, placenta .c 171 to 1221 1 to 1050       1050/1059
(99 %)
10 diff
(99.1 %id)
BU500555   .c 172 to 1044 1 to 873       873/873
(100 %)
7 diff
(99.2 %id)
BU844929 ovary, teratocarcinoma, cell line .c 172 to 1059 1 to 898       898/917
(97 %)
12 diff
(98.7 %id)
CX761005 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 172 to 940 1 to 766     Submitted on the opposite strand 766/767
(99 %)
3 diff
(99.7 %id)
CN395980 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 173 to 873 1 to 701       701/701
(100 %)
1 diff
(99.9 %id)
BU186766 large cell carcinoma, lung .c 173 to 894 1 to 727       727/914
(79 %)
10 diff
(99.0 %id)
BU147411 brain, neuroblastoma, cell line .c 175 to 1043 1 to 870       870/870
(100 %)
5 diff
(99.5 %id)
BQ932699 brain, neuroblastoma, cell line .c 175 to 927 1 to 755       755/856
(88 %)
4 diff
(99.6 %id)
BM922344 leukocyte .c 177 to 1233 6 to 1064       1059/1098
(96 %)
39 diff
(96.5 %id)
BQ950177 large cell carcinoma, lung .c 177 to 1106 23 to 957       933/957
(97 %)
22 diff
(97.8 %id)
CF147098 CNCAP(3)T-225 cell line, Prostate .c 177 to 918 1 to 742       742/742
(100 %)
5 diff
(99.4 %id)
AL560314 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 178 to 1156 1 to 973   fully sequenced,   973/973
(100 %)
2 diff
(99.8 %id)
CN395999 embryonic stem cells, cell lines H1, H7, andH9 .c 181 to 855 1 to 675       675/675
(100 %)
0 diff
(100 %id)
BQ440768 melanotic melanoma, skin .c 181 to 1026 1 to 850       850/852
(99 %)
10 diff
(98.9 %id)
CX755103 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 181 to 913 1 to 733       733/733
(100 %)
0 diff
(100 %id)
CR977127 T-Lymphocytes .c 181 to 976 1 to 797       795/798
(99 %)
3 diff
(99.7 %id)
BM456495 lymph, lymphoma, cell line .c 182 to 1069 1 to 903       903/1046
(86 %)
24 diff
(97.8 %id)
BQ065317 lymph, lymphoma, cell line .c 184 to 1069 1 to 897       897/990
(90 %)
18 diff
(98.2 %id)
TI_154179667   .c 184 to 973 68 to 854       787/788
(99 %)
5 diff
(99.4 %id)
BF795096 lymph, lymphoma, cell line .c 185 to 933 1 to 739       739/970
(76 %)
16 diff
(98.4 %id)
BQ050078 lymph, lymphoma, cell line .c 185 to 1069 1 to 894       894/971
(92 %)
14 diff
(98.6 %id)
CV808910 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 185 to 956 1 to 773       773/774
(99 %)
5 diff
(99.4 %id)
CX870301 embryonic stem .c 186 to 1084 1 to 899       899/899
(100 %)
1 diff
(99.9 %id)
BQ063726 lymph, lymphoma, cell line .c 188 to 1015 1 to 841       841/1088
(77 %)
24 diff
(97.8 %id)
BQ881739 brain, neuroblastoma, cell line .c 188 to 1051 1 to 867       867/868
(99 %)
9 diff
(99.0 %id)
CF132748 Chondrosarcoma Lung Metastasis cell lines, lung .c 189 to 961 1 to 773       773/773
(100 %)
2 diff
(99.8 %id)
TI_159677456   .c 189 to 1138 52 to 998       947/1108
(85 %)
14 diff
(98.8 %id)
BQ898542 brain, neuroblastoma, cell line .c 190 to 1106 1 to 922       922/922
(100 %)
15 diff
(98.4 %id)
TI_154185449   .c 190 to 1030 115 to 944       830/990
(83 %)
17 diff
(98.3 %id)
TI_1948080376   .c 193 to 1008 116 to 931   fully sequenced,   816/931
(87 %)
8 diff
(99.2 %id)
TI_1948080542   .c 193 to 1008 123 to 937   fully sequenced,   815/937
(86 %)
8 diff
(99.2 %id)
TI_1948080718   .c 193 to 1008 118 to 933   fully sequenced,   816/933
(87 %)
7 diff
(99.3 %id)
TI_1948080898   .c 193 to 1063 126 to 995   fully sequenced,   870/995
(87 %)
12 diff
(98.8 %id)
TI_1948135398   .c 193 to 989 118 to 922       803/1268
(63 %)
31 diff
(97.6 %id)
TI_1948136109   .c 193 to 912 120 to 842       723/1275
(56 %)
17 diff
(98.7 %id)
BC012833 Muscle, rhabdomyosarcoma .c 195 to 2086 10 to 1901 exact AAA   1892/3482
(54 %)
1 diff
(100.0 %id)
BE900387 choriocarcinoma, placenta .c 196 to 930 1 to 726       726/729
(99 %)
6 diff
(99.2 %id)
BC011911 Muscle, rhabdomyosarcoma .c 197 to 2291 1 to 2095 exact tiling clone, available from MGC, AAA   2095/2095
(100 %)
0 diff
(100 %id)
BM457584 embryonal carcinoma, cell line, testis .c 197 to 930 1 to 734       734/1028
(71 %)
6 diff
(99.5 %id)
DR157634 human embryonic stem cells differentiated toan early endodermal cell type .c 197 to 940 1 to 744       744/744
(100 %)
0 diff
(100 %id)
TI_57230696   .c 197 to 877 78 to 763       684/686
(99 %)
17 diff
(97.6 %id)
BQ878245 dorsal root ganglia .c 198 to 1067 1 to 874       872/925
(94 %)
8 diff
(99.2 %id)
BQ058111 lymph, lymphoma, cell line .c 200 to 1109 1 to 923       923/988
(93 %)
24 diff
(97.6 %id)
BQ061618 lymph, lymphoma, cell line .c 200 to 1036 1 to 850       850/1107
(76 %)
34 diff
(97.0 %id)
BQ062630 lymph, lymphoma, cell line .c 200 to 1139 1 to 954       954/1019
(93 %)
23 diff
(97.8 %id)
BM454341 lymph, lymphoma, cell line .c 202 to 1069 1 to 878       878/1066
(82 %)
10 diff
(99.1 %id)
BQ957477 large cell carcinoma, lung .c 202 to 1105 1 to 907       907/910
(99 %)
13 diff
(98.6 %id)
TI_57163263   .c 202 to 934 21 to 760       740/891
(83 %)
19 diff
(97.9 %id)
BQ877064 epidermoid carcinoma, cell line, lung .c 205 to 931 1 to 729       729/963
(75 %)
14 diff
(98.6 %id)
CX164133 human embryonic stem cells differentiated toan early endodermal cell type .c 205 to 1042 1 to 838       838/838
(100 %)
0 diff
(100 %id)
BT006866   .c 207 to 1719 1 to 1513       1513/1515
(99 %)
1 diff
(100.0 %id)
CV028532 mixed .c 207 to 837 1 to 631       631/631
(100 %)
1 diff
(99.9 %id)
BQ953120 eye, normal pigmented retinal epithelium .c 217 to 1017 1 to 807       807/974
(82 %)
7 diff
(99.3 %id)
CX866948 embryonic stem .c 225 to 1101 1 to 877       877/877
(100 %)
0 diff
(100 %id)
DR763157 embryonic stem .c 226 to 1040 1 to 815       815/815
(100 %)
0 diff
(100 %id)
BE273916 Kidney, renal cell adenocarcinoma .c 242 to 912 1 to 666       666/667
(99 %)
8 diff
(98.9 %id)
L11932   .c 296 to 2086 1 to 1791       1791/1792
(99 %)
3 diff
(99.9 %id)
BQ955930 large cell carcinoma, lung .c 392 to 1228 1 to 849       849/919
(92 %)
16 diff
(98.3 %id)
CU455915 epidermis .c 393 to 1143 758 to 8     Submitted on the opposite strand 751/758
(99 %)
2 diff
(99.8 %id)
TI_59389820   .c 403 to 1126 65 to 789       725/727
(99 %)
8 diff
(98.9 %id)
CU449342 epidermis .c 410 to 1143 742 to 9     Submitted on the opposite strand 734/742
(98 %)
1 diff
(99.9 %id)
TI_154187776   .c 426 to 1196 122 to 886       765/924
(82 %)
17 diff
(98.2 %id)
CU445128 epidermis .c 448 to 1143 704 to 9     Submitted on the opposite strand 696/704
(98 %)
1 diff
(99.9 %id)
BQ062340 lymph, lymphoma, cell line .c 470 to 1323 1 to 855       855/1015
(84 %)
13 diff
(98.8 %id)
BQ065245 lymph, lymphoma, cell line .c 470 to 1384 1 to 921       921/1002
(91 %)
18 diff
(98.3 %id)
BQ065669 lymph, lymphoma, cell line .c 470 to 1382 1 to 919       919/994
(92 %)
16 diff
(98.4 %id)
BQ066812 lymph, lymphoma, cell line .c 470 to 1327 1 to 865       865/1049
(82 %)
19 diff
(98.2 %id)
AW411012 muscle, rhabdomyosarcoma .c 471 to 1091 1 to 620       620/620
(100 %)
6 diff
(99.1 %id)
TI_59380933   .c 478 to 1234 94 to 855       762/857
(88 %)
18 diff
(97.9 %id)
TI_154168842   .c 484 to 984 80 to 583       504/511
(98 %)
5 diff
(99.1 %id)
TI_154172136   .c 484 to 1208 88 to 820       733/1071
(68 %)
25 diff
(97.7 %id)
TI_1948080377   .c 978 to 1720 870 to 128   fully sequenced,   743/870
(85 %)
1 diff
(99.9 %id)
TI_1948080543   .c 978 to 1720 869 to 128   fully sequenced,   742/869
(85 %)
2 diff
(99.8 %id)
TI_1948080719   .c 978 to 1720 870 to 128   fully sequenced,   743/870
(85 %)
1 diff
(99.9 %id)
TI_1948080899   .c 1032 to 1720 816 to 125   fully sequenced,   692/816
(84 %)
1 diff
(99.9 %id)
AL575616 placenta, Placenta Cot 25-normalized .c 1079 to 2058 986 to 17   fully sequenced,   970/986
(98 %)
8 diff
(99.2 %id)
AL581782 B cells (Ramos cell line), B cells from Burkitt lymphoma .c 1126 to 2056 921 to 1   fully sequenced,   921/921
(100 %)
7 diff
(99.3 %id)
BX404588 neuroblastoma .c 1133 to 2040 910 to 1   fully sequenced,   910/910
(100 %)
12 diff
(98.7 %id)
AL515997 brain, neuroblastoma, neuroblastoma cells .c 1328 to 2277 948 to 1       948/948
(100 %)
16 diff
(98.4 %id)
AL514587 neuroblastoma, placenta .c 1347 to 2295 939 to 1   tiling clone,   939/939
(100 %)
26 diff
(97.3 %id)
AW411277 muscle, rhabdomyosarcoma .c 1474 to 2086 638 to 26   AAA   613/613
(100 %)
0 diff
(100 %id)
AW411013 muscle, rhabdomyosarcoma .c 1573 to 2086 550 to 37   AAA   514/514
(100 %)
0 diff
(100 %id)
DB330704 skeletal muscle .c 1612 to 2086 474 to 1       474/474
(100 %)
2 diff
(99.6 %id)
DB366179   .c 1830 to 2294 465 to 1       465/465
(100 %)
1 diff
(99.8 %id)
NM_001166356.1   .d 1 to 2265 1 to 2265 exact RefSeq,   2265/2265
(100 %)
0 diff
(100 %id)
DA066938 cerebellum .d 90 to 663 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA526062 brain .d 112 to 687 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB117315 thymus .d 114 to 741 2 to 629   capped   628/628
(100 %)
0 diff
(100 %id)
DA086648 cerebellum .d 120 to 677 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA373088 thalamus .d 120 to 730 2 to 612   capped   611/611
(100 %)
0 diff
(100 %id)
DA711103   .d 120 to 683 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA907945   .d 120 to 800 2 to 681   capped   680/798
(85 %)
5 diff
(99.4 %id)
BM787444 stomach .d 121 to 691 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA036179 breast .d 122 to 706 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA482410   .d 122 to 723 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA541670 lung .d 122 to 703 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA696402   .d 122 to 696 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA908070   .d 122 to 698 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA941125 Spleen .d 122 to 702 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA968983 stomach .d 122 to 697 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB108818 thymus .d 122 to 705 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB113154 thymus .d 122 to 698 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CB124954 Liver .d 123 to 714 1 to 592       592/592
(100 %)
0 diff
(100 %id)
DA067428 cerebellum .d 129 to 709 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA747067   .d 129 to 706 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BQ639114 eye, retina .d 130 to 763 1 to 634       634/634
(100 %)
0 diff
(100 %id)
DA819372   .d 130 to 708 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA052519   .d 133 to 713 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA578218   .d 134 to 673 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA050524   .d 138 to 724 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA202591 brain .d 138 to 714 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB102343 thymus .d 138 to 685 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA018007 adrenal gland .d 139 to 715 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
CB152336 brain .d 139 to 704 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BC032584 Lymph, lymphoma .d 139 to 2056 12 to 1929 exact tiling clone, available from MGC, AAA   1918/1918
(100 %)
0 diff
(100 %id)
DA043976 bladder .d 139 to 707 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA050205   .d 139 to 725 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BM830188 stomach .d 139 to 746 1 to 608       608/608
(100 %)
0 diff
(100 %id)
DB113723 thymus .d 139 to 700 15 to 576   capped   562/562
(100 %)
0 diff
(100 %id)
DA002599   .d 140 to 709 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA012486 adrenal gland .d 140 to 702 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA015012 adrenal gland .d 140 to 708 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA018412   .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA026297   .d 140 to 703 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA033948   .d 140 to 706 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA042226 bladder .d 140 to 703 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA046681 bladder .d 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA049576   .d 140 to 703 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA051970   .d 140 to 729 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA052508   .d 140 to 721 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA061232 cerebellum .d 140 to 705 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA068856 cerebellum .d 140 to 700 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA079124 cerebellum .d 140 to 713 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA082532 cerebellum .d 140 to 708 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA090642 cerebellum .d 140 to 716 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA131916 alzheimer cortex .d 140 to 708 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA265625 caudate nucleus .d 140 to 707 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA372456 thalamus .d 140 to 754 2 to 616   capped   615/615
(100 %)
1 diff
(99.9 %id)
DA373654 thalamus .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA375850 thalamus .d 140 to 694 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA381741 thalamus .d 140 to 697 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA381751 thalamus .d 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA383661 thalamus .d 140 to 766 2 to 628   capped   627/627
(100 %)
0 diff
(100 %id)
DA386195 thalamus .d 140 to 711 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA478666   .d 140 to 699 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA485207 brain .d 140 to 699 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA535812 heart .d 140 to 714 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA537941 Kidney .d 140 to 724 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA539332 Kidney .d 140 to 729 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA548976   .d 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA553236   .d 140 to 711 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA558091   .d 140 to 715 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA566511 heart .d 140 to 698 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA584394 lung .d 140 to 718 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA589004 lung .d 140 to 714 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA605169   .d 140 to 698 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA605523   .d 140 to 687 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA605690   .d 140 to 685 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA607228   .d 140 to 700 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA607383   .d 140 to 702 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA615890   .d 140 to 716 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA657983   .d 140 to 701 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA658849   .d 140 to 712 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA678643   .d 140 to 683 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA679400   .d 140 to 709 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA729809   .d 140 to 687 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA747780   .d 140 to 711 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA749706   .d 140 to 715 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA775616 brain .d 140 to 720 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA815193   .d 140 to 718 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA815310   .d 140 to 701 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA818127   .d 140 to 681 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA819851   .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA839876 placenta .d 140 to 692 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA846420 placenta .d 140 to 714 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA846783 placenta .d 140 to 721 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA846918 placenta .d 140 to 716 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA873024 Prostate .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA890166 rectum .d 140 to 696 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BM789266 stomach .d 140 to 790 1 to 651       651/651
(100 %)
0 diff
(100 %id)
DA896951 skeletal muscle .d 140 to 703 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA909820   .d 140 to 710 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA944302 Spleen .d 140 to 706 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA944544 Spleen .d 140 to 696 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA944579 Spleen .d 140 to 679 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA945960 Spleen .d 140 to 698 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA949459 Spleen .d 140 to 681 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA951390 Spleen .d 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA955707 Spleen .d 140 to 712 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA963368 stomach .d 140 to 686 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA966444 stomach .d 140 to 702 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA966571 stomach .d 140 to 692 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB009376 colon, tumor tissue .d 140 to 703 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB045824 testis .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB101422 thymus .d 140 to 698 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB101470 thymus .d 140 to 697 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB101968 thymus .d 140 to 703 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB103169 thymus .d 140 to 697 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB103302 thymus .d 140 to 708 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB104129 thymus .d 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB104615 thymus .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB107380 thymus .d 140 to 710 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB108537 thymus .d 140 to 711 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB108999 thymus .d 140 to 718 2 to 580   capped   579/587
(98 %)
0 diff
(100 %id)
DB109178 thymus .d 140 to 715 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB109934 thymus .d 140 to 697 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB115451 thymus .d 140 to 697 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB115924 thymus .d 140 to 695 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB117540 thymus .d 140 to 700 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB120624 thymus .d 140 to 681 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB127327 thymus .d 140 to 691 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB129285 thymus .d 140 to 692 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB190804 lung, tumor tissue .d 140 to 692 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB191028 lung, tumor tissue .d 140 to 710 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB191143 lung, tumor tissue .d 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB197870 trachea .d 140 to 724 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB198324 trachea .d 140 to 718 2 to 580   capped   579/587
(98 %)
0 diff
(100 %id)
DB242063 stomach, tumor tissue .d 140 to 699 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB246051 uterus, tumor tissue .d 140 to 711 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB246379 uterus, tumor tissue .d 140 to 718 2 to 580   capped   579/587
(98 %)
0 diff
(100 %id)
DB265312 uterus .d 140 to 723 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB266153 uterus .d 140 to 727 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA369882 subthalamic nucleus .d 141 to 685 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA441013 tongue, tumor tissue .d 141 to 689 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA521050 brain .d 141 to 700 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA565074 heart .d 141 to 708 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA599841   .d 141 to 707 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA629826 Kidney .d 141 to 696 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA680209   .d 141 to 699 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA763497 tongue .d 141 to 695 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA819476   .d 141 to 704 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA906409   .d 141 to 708 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA910667   .d 141 to 686 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA926408 small intestine .d 141 to 711 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DB006079 breast, tumor tissue .d 141 to 728 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB101015 thymus .d 141 to 678 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB117909 thymus .d 141 to 696 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DB190695 lung, tumor tissue .d 141 to 714 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA008019   .d 142 to 694 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA071046 cerebellum .d 142 to 712 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA374388 thalamus .d 142 to 685 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DB269824 uterus .d 142 to 700 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA028034   .d 143 to 705 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA042055 bladder .d 143 to 715 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA157666 amygdala .d 143 to 718 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA376811 thalamus .d 143 to 695 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA542055 lung .d 143 to 729 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA424212   .d 144 to 710 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
BM764678 Ascites, stomach .d 144 to 724 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM781533 Ascites, stomach .d 144 to 800 1 to 657       657/658
(99 %)
1 diff
(99.9 %id)
CR985033 T-Lymphocytes .d 145 to 729 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DA945057 Spleen .d 145 to 698 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA025567   .d 147 to 715 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA499726 brain .d 148 to 694 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA523706 brain .d 148 to 723 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA874420 Prostate .d 148 to 701 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA912421   .d 148 to 713 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB127887 thymus .d 148 to 709 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA077593 cerebellum .d 149 to 712 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB177476 kidney, tumor tissue .d 149 to 706 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
BM834053 stomach .d 150 to 710 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DA005759   .d 151 to 735 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA007027   .d 151 to 731 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA050511   .d 151 to 731 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA051499   .d 151 to 738 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA052085   .d 151 to 753 2 to 604   capped   603/603
(100 %)
0 diff
(100 %id)
DA077853 cerebellum .d 151 to 725 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BI821062 pooled brain, lung, testis .d 151 to 725 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DA605550   .d 151 to 758 2 to 609   capped   608/610
(99 %)
1 diff
(99.9 %id)
DA615845   .d 151 to 725 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CR975823 T-Lymphocytes .d 151 to 743 1 to 593       593/597
(99 %)
1 diff
(99.9 %id)
DA938107 Spleen .d 151 to 749 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DB117288 thymus .d 151 to 777 2 to 628   capped   627/627
(100 %)
0 diff
(100 %id)
DA549273   .d 164 to 751 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA601655   .d 164 to 738 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
CR975688 T-Lymphocytes .d 166 to 762 1 to 597       597/597
(100 %)
0 diff
(100 %id)
AW410459 muscle, rhabdomyosarcoma .d 167 to 794 18 to 645       628/645
(97 %)
6 diff
(99.1 %id)
AL711093 human skeletal muscle .d 168 to 654 1 to 487       487/487
(100 %)
0 diff
(100 %id)
CB153658 brain .d 170 to 797 1 to 628       628/628
(100 %)
0 diff
(100 %id)
BE298849 muscle, rhabdomyosarcoma .d 171 to 800 1 to 629       629/762
(82 %)
5 diff
(99.4 %id)
BE266577 lung, small cell carcinoma .d 178 to 759 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB342208 thymus .d 1545 to 2056 512 to 1       512/512
(100 %)
0 diff
(100 %id)
AW410460 muscle, rhabdomyosarcoma .d 1612 to 2056 463 to 19   AAA   445/445
(100 %)
0 diff
(100 %id)
AL711094 human skeletal muscle .d 1621 to 2055 455 to 21   AAA   435/435
(100 %)
2 diff
(99.6 %id)
DA052422   .e 1 to 531 2 to 535   tiling clone, capped   534/534
(100 %)
4 diff
(99.3 %id)
NM_001166358.1   .e 2 to 2257 1 to 2256 exact RefSeq,   2256/2256
(100 %)
0 diff
(100 %id)
DA049912   .e 35 to 558 2 to 527   capped   526/526
(100 %)
3 diff
(99.5 %id)
BX647711 lung endothel, primary cell culture .e 42 to 2048 1 to 2007 S76P tiling clone, available from DKFZ, AAA   2007/2007
(100 %)
3 diff
(99.9 %id)
DW429547 Liver .e 48 to 436 12 to 400       389/400
(97 %)
6 diff
(98.5 %id)
DA078908 cerebellum .e 61 to 515 2 to 457   capped   456/456
(100 %)
2 diff
(99.6 %id)
DA379020 thalamus .e 61 to 615 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA600069   .e 61 to 629 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
DB183457 liver, tumor tissue .e 63 to 649 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB187921 liver, tumor tissue .e 69 to 655 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA597394   .e 71 to 625 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA025909   .e 72 to 639 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA270328 caudate nucleus .e 87 to 617 2 to 535   capped   534/534
(100 %)
8 diff
(98.6 %id)
DA597699   .e 87 to 626 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA019507   .e 89 to 654 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA033808   .e 89 to 654 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA558234   .e 89 to 638 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA602322   .e 89 to 658 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA602717   .e 89 to 558 2 to 473   capped   472/472
(100 %)
2 diff
(99.6 %id)
DA865526 Prostate .e 89 to 612 2 to 524   capped   523/523
(100 %)
2 diff
(99.7 %id)
DA050910   .e 91 to 654 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA378815 thalamus .e 91 to 721 2 to 632   capped   631/631
(100 %)
1 diff
(99.9 %id)
DA385197 thalamus .e 91 to 649 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA575461   .e 91 to 651 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA575753   .e 98 to 646 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
BI752089 brain .e 99 to 762 1 to 664       664/667
(99 %)
3 diff
(99.6 %id)
TI_57215187   .e 99 to 762 35 to 698       664/701
(94 %)
9 diff
(98.8 %id)
DA556870   .e 100 to 657 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA580678   .e 100 to 652 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA597325   .e 100 to 592 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
DB057106 testis .e 100 to 625 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB202005 trachea .e 100 to 672 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
CF135205 CNCAP(3)T-225 cell line, Prostate .e 105 to 511 7 to 413       407/413
(98 %)
6 diff
(98.6 %id)
TI_154163391   .e 105 to 760 79 to 742       664/810
(81 %)
26 diff
(96.8 %id)
DA580197   .e 113 to 674 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA579125   .e 114 to 601 2 to 489   capped   488/490
(99 %)
2 diff
(99.6 %id)
DA375591 thalamus .e 123 to 684 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DA424562   .e 123 to 686 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA471880   .e 123 to 692 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA480359   .e 123 to 676 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA700743   .e 123 to 646 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
DA998328   .e 123 to 581 2 to 460   capped   459/459
(100 %)
0 diff
(100 %id)
AU279696   .e 124 to 699 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
CB132104 Liver .e 124 to 526 1 to 403       403/403
(100 %)
1 diff
(99.8 %id)
BM827559 stomach .e 124 to 711 1 to 589       589/589
(100 %)
2 diff
(99.7 %id)
DA047871   .e 125 to 673 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA284353 corpus callosum .e 125 to 612 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DA284391 corpus callosum .e 125 to 620 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
DA371918 thalamus .e 125 to 667 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DA373690 thalamus .e 125 to 671 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA376041 thalamus .e 125 to 687 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA377345 thalamus .e 125 to 691 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA377474 thalamus .e 125 to 606 2 to 483   capped   482/482
(100 %)
1 diff
(99.8 %id)
DA382259 thalamus .e 125 to 695 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA424481   .e 125 to 680 2 to 557   capped   556/563
(98 %)
2 diff
(99.7 %id)
DA466068   .e 125 to 685 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA535727 heart .e 125 to 683 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA539282 Kidney .e 125 to 613 2 to 490   capped   489/489
(100 %)
0 diff
(100 %id)
DA554566   .e 125 to 592 2 to 469   capped   468/468
(100 %)
0 diff
(100 %id)
DA558913   .e 125 to 669 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA573924   .e 125 to 680 2 to 557   capped   556/557
(99 %)
0 diff
(100 %id)
DA598312   .e 125 to 663 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA600426   .e 125 to 678 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA602878   .e 125 to 680 2 to 557   capped   556/559
(99 %)
2 diff
(99.7 %id)
AU125632   .e 125 to 891 2 to 768   capped   767/853
(89 %)
5 diff
(99.5 %id)
DA847901 placenta .e 125 to 680 2 to 557   capped   556/564
(98 %)
1 diff
(99.9 %id)
DA890031   .e 125 to 686 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA918229 small intestine .e 125 to 677 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA963407 stomach .e 125 to 612 2 to 489   capped   488/488
(100 %)
0 diff
(100 %id)
DB183832 liver, tumor tissue .e 125 to 690 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB184243 liver, tumor tissue .e 125 to 704 2 to 581   capped   580/582
(99 %)
1 diff
(99.9 %id)
DB186659 liver, tumor tissue .e 125 to 532 2 to 409   capped   408/408
(100 %)
0 diff
(100 %id)
DB246678   .e 125 to 553 2 to 430   capped   429/429
(100 %)
2 diff
(99.6 %id)
DA598472   .e 129 to 689 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA663438   .e 129 to 687 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB189421 lung, tumor tissue .e 129 to 680 2 to 553   capped   552/553
(99 %)
0 diff
(100 %id)
DB190499 lung, tumor tissue .e 129 to 711 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
CF132149 Chondrosarcoma Lung Metastasis cell lines, lung .e 131 to 992 1 to 856   tiling clone,   856/864
(99 %)
7 diff
(99.2 %id)
TI_159677888   .e 131 to 1037 51 to 944       894/1002
(89 %)
13 diff
(98.8 %id)
BG330181 large cell carcinoma, lung .e 134 to 680 1 to 556       556/616
(90 %)
13 diff
(97.9 %id)
BG437135 large cell carcinoma, lung .e 134 to 676 1 to 561       561/1073
(52 %)
28 diff
(97.4 %id)
BF237873 leiomyosarcoma cell line, uterus .e 135 to 533 1 to 402       402/1151
(34 %)
9 diff
(99.3 %id)
BG488958 large cell carcinoma, lung .e 135 to 542 1 to 410       410/779
(52 %)
8 diff
(99.0 %id)
BI334523 cervical carcinoma cell line, cervix .e 136 to 880 1 to 746       746/931
(80 %)
11 diff
(98.9 %id)
BQ954700 large cell carcinoma, lung .e 136 to 1031 34 to 933       900/955
(94 %)
19 diff
(98.1 %id)
BQ927528 large cell carcinoma, lung .e 138 to 889 1 to 758       758/961
(78 %)
19 diff
(98.1 %id)
BU507836 leiomyosarcoma, uterus .e 139 to 1031 10 to 916       907/931
(97 %)
22 diff
(97.7 %id)
DA057692 cerebellum .e 145 to 720 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA269919 caudate nucleus .e 145 to 707 2 to 565   capped   564/565
(99 %)
3 diff
(99.5 %id)
DA550307   .e 145 to 704 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA963141 stomach .e 145 to 719 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA602815   .e 149 to 714 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA378448 thalamus .e 152 to 716 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA603041   .e 154 to 724 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BE390715 endometrium, adenocarcinoma cell line, uterus .e 155 to 769 1 to 615       615/619
(99 %)
9 diff
(98.6 %id)
AL559803 B cells (Ramos cell line), B cells from Burkitt lymphoma .e 157 to 1105 1 to 944   fully sequenced,   944/944
(100 %)
10 diff
(99.0 %id)
BF310041 muscle, rhabdomyosarcoma .e 165 to 892 1 to 719       719/859
(83 %)
16 diff
(98.2 %id)
BM825932 Ascites, stomach .e 168 to 494 1 to 327       327/327
(100 %)
0 diff
(100 %id)
BE790276 large cell carcinoma, lung .e 175 to 970 1 to 789       789/879
(89 %)
38 diff
(95.7 %id)
DA374854 thalamus .e 178 to 741 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
BF304097 muscle, rhabdomyosarcoma .e 181 to 889 1 to 707       707/972
(72 %)
18 diff
(98.2 %id)
BF306608 muscle, rhabdomyosarcoma .e 182 to 869 1 to 685       685/685
(100 %)
24 diff
(96.5 %id)
BG825335 muscle, rhabdomyosarcoma .e 182 to 787 1 to 623       623/623
(100 %)
30 diff
(95.2 %id)
BQ224029 large cell carcinoma, lung .e 184 to 680 1 to 498       498/906
(54 %)
4 diff
(99.6 %id)
AL581346 B cells (Ramos cell line), B cells from Burkitt lymphoma .e 1075 to 2006 920 to 1   fully sequenced,   920/920
(100 %)
18 diff
(98.1 %id)
DB363250   .e 1487 to 2048 562 to 1   tiling clone,   562/564
(99 %)
9 diff
(98.5 %id)
DC301772   .f 1 to 405 1 to 404       404/404
(100 %)
1 diff
(99.8 %id)
DC339924 thalamus .f 1 to 579 1 to 579   tiling clone,   579/579
(100 %)
0 diff
(100 %id)
NM_001166357.1   .f 1 to 2357 1 to 2357 exact RefSeq,   2357/2357
(100 %)
0 diff
(100 %id)
BF203296 muscle, rhabdomyosarcoma .f 6 to 630 1 to 627       625/926
(67 %)
19 diff
(98.0 %id)
BG827169 muscle, rhabdomyosarcoma .f 6 to 404 1 to 399       399/402
(99 %)
3 diff
(99.3 %id)
BI113716 muscle, rhabdomyosarcoma .f 6 to 577 1 to 585       585/624
(93 %)
20 diff
(96.8 %id)
BI114546 muscle, rhabdomyosarcoma .f 6 to 591 1 to 585       585/585
(100 %)
4 diff
(99.4 %id)
DC301623   .f 8 to 554 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
AK315916   .f 9 to 2121 1 to 2113 exact tiling clone,   2113/2113
(100 %)
0 diff
(100 %id)
DC301654   .f 9 to 588 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC301874   .f 9 to 591 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC348733   .f 9 to 575 1 to 567       567/567
(100 %)
0 diff
(100 %id)
BI113675 muscle, rhabdomyosarcoma .f 9 to 464 1 to 460       460/670
(68 %)
5 diff
(99.3 %id)
BF306433 muscle, rhabdomyosarcoma .f 13 to 672 1 to 660       660/773
(85 %)
25 diff
(96.8 %id)
CN413398 embryonic stem cells, cell lines H1, H7, andH9 .f 16 to 293 1 to 277       277/277
(100 %)
1 diff
(99.7 %id)
BG826944 muscle, rhabdomyosarcoma .f 22 to 590 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
BI115001 muscle, rhabdomyosarcoma .f 22 to 499 1 to 479       479/483
(99 %)
4 diff
(99.2 %id)
BX428748 neuroblastoma .f 25 to 777 1 to 756       756/998
(75 %)
61 diff
(93.9 %id)
BX424712 placenta .f 25 to 860 1 to 831       831/831
(100 %)
21 diff
(97.5 %id)
BE294395 muscle, rhabdomyosarcoma .f 31 to 702 1 to 670       668/689
(96 %)
17 diff
(97.6 %id)
DC301686   .f 34 to 491 1 to 459       459/459
(100 %)
1 diff
(99.8 %id)
DC359945   .f 34 to 575 1 to 542       542/542
(100 %)
0 diff
(100 %id)
BE269719 Burkitt lymphoma, lymph .f 41 to 701 1 to 663       663/685
(96 %)
16 diff
(97.7 %id)
BI114702 muscle, rhabdomyosarcoma .f 65 to 519 1 to 458       456/460
(99 %)
9 diff
(98.1 %id)
BI114730 muscle, rhabdomyosarcoma .f 69 to 499 1 to 436       436/589
(74 %)
8 diff
(98.7 %id)
BX404547 neuroblastoma .f 166 to 1253 1 to 1077   fully sequenced,   1077/1077
(100 %)
29 diff
(97.4 %id)
BQ056179 lymph, lymphoma, cell line .f 198 to 1080 1 to 899       899/1019
(88 %)
27 diff
(97.4 %id)
BX404546 neuroblastoma .f 1242 to 2326 1081 to 4   tiling clone, fully sequenced,   1078/1081
(99 %)
16 diff
(98.6 %id)
CN395976 embryonic stem cells, cell lines H1, H7, andH9 .g 1 to 702 1 to 702   tiling clone,   702/702
(100 %)
2 diff
(99.8 %id)
NM_001166359.1   .g 3 to 2151 1 to 2149 exact RefSeq,   2149/2149
(100 %)
0 diff
(100 %id)
BG825546 muscle, rhabdomyosarcoma .g 5 to 396 1 to 394       394/454
(86 %)
11 diff
(97.6 %id)
BE297999 muscle, rhabdomyosarcoma .g 25 to 629 1 to 604       604/604
(100 %)
1 diff
(99.9 %id)
BE298714 muscle, rhabdomyosarcoma .g 25 to 620 1 to 596       596/597
(99 %)
1 diff
(99.9 %id)
BE295105 muscle, rhabdomyosarcoma .g 33 to 649 1 to 619       619/619
(100 %)
4 diff
(99.4 %id)
BG829315 muscle, rhabdomyosarcoma .g 40 to 735 1 to 696   tiling clone,   696/699
(99 %)
5 diff
(99.3 %id)
DC301547   .g 41 to 461 1 to 421       421/429
(98 %)
1 diff
(99.8 %id)
AK296183 thalamus .g 43 to 1767 1 to 1725 P178L I200T L360P tiling clone,   1725/1725
(100 %)
5 diff
(99.8 %id)
DC340665 thalamus .g 43 to 605 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
BF307427 muscle, rhabdomyosarcoma .g 57 to 685 1 to 626       626/925
(67 %)
10 diff
(99.0 %id)
BE298518 muscle, rhabdomyosarcoma .g 60 to 714 1 to 654       654/735
(88 %)
14 diff
(98.1 %id)
BG827795 muscle, rhabdomyosarcoma .g 60 to 372 1 to 318       318/1059
(30 %)
8 diff
(99.3 %id)
BF303687 muscle, rhabdomyosarcoma .g 69 to 648 1 to 580       580/768
(75 %)
12 diff
(98.5 %id)
BG825647 muscle, rhabdomyosarcoma .g 69 to 786 1 to 722       722/757
(95 %)
22 diff
(97.1 %id)
BG826227 muscle, rhabdomyosarcoma .g 69 to 653 1 to 600       527/674
(78 %)
21 diff
(96.9 %id)
BI114814 muscle, rhabdomyosarcoma .g 69 to 685 1 to 630       488/630
(77 %)
19 diff
(97.0 %id)
BF305317 muscle, rhabdomyosarcoma .g 82 to 714 1 to 694       457/695
(65 %)
27 diff
(96.2 %id)
BF303585 muscle, rhabdomyosarcoma .h -9 to 547 1 to 557       557/953
(58 %)
9 diff
(99.1 %id)
BF305096 muscle, rhabdomyosarcoma .h -9 to 577 1 to 584   tiling clone,   584/584
(100 %)
13 diff
(97.8 %id)
BF305968 muscle, rhabdomyosarcoma .h -9 to 669 1 to 687       687/828
(82 %)
22 diff
(97.4 %id)
AW410441 muscle, rhabdomyosarcoma .h 1 to 622 20 to 641   tiling clone,   624/641
(97 %)
7 diff
(99.0 %id)
BF306108 muscle, rhabdomyosarcoma .h 6 to 682 1 to 672       672/856
(78 %)
23 diff
(97.4 %id)
AW410388 muscle, rhabdomyosarcoma .h 165 to 727 18 to 580   tiling clone,   563/580
(97 %)
3 diff
(99.5 %id)
AW410389 muscle, rhabdomyosarcoma .h 1640 to 2087 489 to 42   tiling clone, AAA   448/448
(100 %)
10 diff
(97.8 %id)
CR613033 neuroblastoma .i 1 to 2152 1 to 2152 exact tiling clone,   2152/2152
(100 %)
0 diff
(100 %id)
BX428224 neuroblastoma .i 1 to 993 1 to 987       987/1097
(89 %)
13 diff
(98.9 %id)
BX465023 neuroblastoma .i 1 to 976 1 to 974       974/974
(100 %)
9 diff
(99.1 %id)
BE019090 muscle, rhabdomyosarcoma .i 67 to 448 1 to 382       382/382
(100 %)
13 diff
(96.6 %id)
AW410455 muscle, rhabdomyosarcoma .i 523 to 1145 25 to 648       624/648
(96 %)
7 diff
(99.0 %id)
BE205851 muscle, rhabdomyosarcoma .i 1947 to 2361 420 to 6   tiling clone,   415/420
(98 %)
0 diff
(100 %id)
BF304932 muscle, rhabdomyosarcoma .j 1 to 643 5 to 651       651/851
(76 %)
29 diff
(96.6 %id)
BC008711 Muscle, rhabdomyosarcoma .j 1 to 2301 4 to 2304 exact tiling clone, available from MGC, AAA   2304/2304
(100 %)
0 diff
(100 %id)
AW410275 muscle, rhabdomyosarcoma .j 16 to 620 22 to 626       605/626
(96 %)
3 diff
(99.6 %id)
BF306321 muscle, rhabdomyosarcoma .j 20 to 496 1 to 471       471/979
(48 %)
9 diff
(99.1 %id)
BI115556 muscle, rhabdomyosarcoma .j 24 to 480 42 to 494       453/535
(84 %)
13 diff
(97.6 %id)
TI_154127213   .j 1601 to 2296 788 to 96   AAA   693/912
(75 %)
4 diff
(99.6 %id)
TI_149286070   .j 1604 to 2301 792 to 96   AAA   697/811
(85 %)
4 diff
(99.6 %id)
TI_154127815   .j 1611 to 2301 817 to 123   AAA   695/1011
(68 %)
17 diff
(98.4 %id)
BU681775 lung .j 1644 to 2300 671 to 19   AAA   653/653
(100 %)
5 diff
(99.3 %id)
BG825948 muscle, rhabdomyosarcoma .j 1681 to 2298 1 to 618       618/689
(89 %)
4 diff
(99.5 %id)
CA416952 Chondrosarcoma Cell line .j 1700 to 2296 614 to 20   AAA   595/595
(100 %)
2 diff
(99.7 %id)
BU680914 lung .j 1701 to 2301 619 to 19   AAA   601/601
(100 %)
0 diff
(100 %id)
BI223530 cervical carcinoma cell line, cervix .j 1827 to 2301 1 to 475   AAA   475/475
(100 %)
4 diff
(99.2 %id)
BE205777 muscle, rhabdomyosarcoma .j 1837 to 2302 471 to 6       466/471
(98 %)
0 diff
(100 %id)
AI142430 uterus .j 1842 to 2302 468 to 8       461/468
(98 %)
0 diff
(100 %id)
AI138694 uterus .j 1861 to 2301 458 to 18   AAA   441/441
(100 %)
0 diff
(100 %id)
AI144004 uterus .j 1906 to 2302 405 to 9       397/405
(98 %)
0 diff
(100 %id)
AA910240 Kidney .j 1919 to 2301 380 to 1       380/380
(100 %)
4 diff
(99.0 %id)
AW410276 muscle, rhabdomyosarcoma .j 1930 to 2301 451 to 80       372/454
(81 %)
0 diff
(100 %id)
BU935272 mixed (pool of 40 RNAs) .j 1974 to 2301 1 to 328       328/991
(33 %)
8 diff
(99.2 %id)
BG256971 embryonal carcinoma, cell line, testis .j 2014 to 2301 1 to 293   AAA   293/293
(100 %)
7 diff
(97.7 %id)
AW512170 lymph node, lymphoma, follicular mixed small and largecell .j 2110 to 2285 176 to 1       176/176
(100 %)
3 diff
(98.3 %id)
AW976056   .j 2273 to 2963 1 to 691   tiling clone,   691/691
(100 %)
8 diff
(98.9 %id)
NR_029415.1   .k 1 to 2097 1 to 2097 exact RefSeq, tiling clone,   2097/2097
(100 %)
0 diff
(100 %id)
AW410722 muscle, rhabdomyosarcoma .k 36 to 571 19 to 554       536/554
(96 %)
6 diff
(99.0 %id)
AW411158 muscle, rhabdomyosarcoma .k 36 to 584 9 to 557       549/557
(98 %)
6 diff
(99.0 %id)
BC004189 Muscle, rhabdomyosarcoma .k 36 to 1936 9 to 1909 exact AAA   1901/3300
(57 %)
1 diff
(100.0 %id)
BC004215 Muscle, rhabdomyosarcoma .k 36 to 1936 9 to 1909 exact AAA   1901/3300
(57 %)
1 diff
(100.0 %id)
BF203541 muscle, rhabdomyosarcoma .k 36 to 725 1 to 683       683/949
(71 %)
21 diff
(97.8 %id)
BF305577 muscle, rhabdomyosarcoma .k 38 to 731 1 to 690       690/837
(82 %)
21 diff
(97.5 %id)
AK297173 brain .k 41 to 1925 1 to 1885 exact     1885/1885
(100 %)
2 diff
(99.9 %id)
DC349757 brain .k 41 to 600 1 to 560       560/560
(100 %)
1 diff
(99.9 %id)
BE298571 muscle, rhabdomyosarcoma .k 58 to 687 1 to 631       631/737
(85 %)
14 diff
(98.2 %id)
DA056227 cerebellum .l 1 to 579 5 to 583   tiling clone, capped   582/588
(98 %)
5 diff
(99.2 %id)
BF304753 muscle, rhabdomyosarcoma .l 2 to 579 1 to 574       574/895
(64 %)
10 diff
(98.9 %id)
DB013095 esophageal, tumor tissue .l 8 to 579 2 to 572   capped   571/577
(98 %)
2 diff
(99.7 %id)
DA042462 bladder .l 12 to 576 2 to 567   capped   566/573
(98 %)
4 diff
(99.4 %id)
BF795839 lymph, lymphoma, cell line .l 12 to 719 1 to 702       627/705
(88 %)
23 diff
(96.8 %id)
DA615631   .l 12 to 576 2 to 568   capped   567/574
(98 %)
3 diff
(99.5 %id)
DA657820   .l 12 to 579 2 to 572   capped   571/575
(99 %)
4 diff
(99.4 %id)
DA922951 small intestine .l 12 to 579 2 to 570   capped   569/574
(99 %)
2 diff
(99.7 %id)
BQ894965 sciatic nerve .l 16 to 576 11 to 576       566/991
(57 %)
15 diff
(98.5 %id)
BE297009 muscle, rhabdomyosarcoma .l 20 to 579 1 to 585       506/598
(84 %)
30 diff
(95.0 %id)
BE270394 Burkitt lymphoma, lymph .l 22 to 579 1 to 557       557/561
(99 %)
4 diff
(99.3 %id)
BG765771 melanotic melanoma, high MDR (cell line), skin .l 26 to 783 1 to 773       638/788
(80 %)
22 diff
(97.3 %id)
BQ427462 eye, retinoblastoma .l 28 to 576 1 to 552       552/855
(64 %)
4 diff
(99.6 %id)
BE794015 lung, small cell carcinoma .l 31 to 578 1 to 560       560/597
(93 %)
11 diff
(98.2 %id)
BF688804 eye, normal pigmented retinal epithelium .l 31 to 579 1 to 553       553/983
(56 %)
15 diff
(98.5 %id)
BG827443 muscle, rhabdomyosarcoma .l 31 to 576 11 to 564       554/637
(86 %)
20 diff
(96.9 %id)
BQ049111 lymph, lymphoma, cell line .l 34 to 576 24 to 567       544/1126
(48 %)
13 diff
(98.9 %id)
BQ220586 large cell carcinoma, lung .l 34 to 576 1 to 550       550/848
(64 %)
10 diff
(98.9 %id)
DA596719   .l 39 to 576 2 to 539   capped   538/545
(98 %)
1 diff
(99.9 %id)
BC008066 Muscle, rhabdomyosarcoma .l 48 to 1951 1 to 1904 exact tiling clone, available from MGC, AAA   1904/1904
(100 %)
0 diff
(100 %id)
BE295072 muscle, rhabdomyosarcoma .l 60 to 664 1 to 630       626/713
(87 %)
48 diff
(93.3 %id)
BM801105 embryonal carcinoma, cell line, testis .l 60 to 579 1 to 522       522/973
(53 %)
8 diff
(99.2 %id)
CX870623 embryonic stem .l 377 to 1135 1 to 759       759/759
(100 %)
2 diff
(99.8 %id)
TI_57233266   .l 395 to 1124 1 to 733       733/733
(100 %)
7 diff
(99.1 %id)
H39749 breast .l 442 to 579 1 to 137       137/142
(96 %)
4 diff
(97.2 %id)
BU500666   .m 1 to 871 2 to 881   tiling clone,   881/905
(97 %)
20 diff
(97.8 %id)
BQ057288 lymph, lymphoma, cell line .m 6 to 872 1 to 871   tiling clone,   871/1060
(82 %)
18 diff
(98.4 %id)
BM310012 insulinoma, Pancreas .m 867 to 1397 1 to 531   tiling clone,   531/531
(100 %)
5 diff
(99.1 %id)
CK905261 insulinoma, Pancreas .m 867 to 1141 1 to 275       275/275
(100 %)
14 diff
(95.0 %id)
AI635841 adenocarcinoma, Pancreas .m 1156 to 1879 740 to 24   tiling clone, AAA   717/717
(100 %)
16 diff
(97.8 %id)
BF306271 muscle, rhabdomyosarcoma .n 1 to 700 1 to 687   tiling clone,   687/801
(85 %)
25 diff
(96.9 %id)
BE294298 muscle, rhabdomyosarcoma .n 22 to 710 1 to 698       698/744
(93 %)
22 diff
(97.1 %id)
BE250263 muscle, rhabdomyosarcoma .n 23 to 807 1 to 782   tiling clone,   782/858
(91 %)
10 diff
(98.9 %id)
BE250578 muscle, rhabdomyosarcoma .n 26 to 810 1 to 782       782/885
(88 %)
9 diff
(99.0 %id)
BF203915 muscle, rhabdomyosarcoma .n 27 to 703 1 to 667       667/908
(73 %)
18 diff
(98.1 %id)
BF309183 muscle, rhabdomyosarcoma .n 27 to 651 1 to 616       618/914
(67 %)
18 diff
(98.1 %id)
BF307845 muscle, rhabdomyosarcoma .n 27 to 651 1 to 628       630/877
(71 %)
38 diff
(95.7 %id)
BG828460 muscle, rhabdomyosarcoma .n 27 to 620 1 to 599       599/599
(100 %)
11 diff
(98.2 %id)
BG828798 muscle, rhabdomyosarcoma .n 27 to 650 1 to 619       619/685
(90 %)
24 diff
(96.5 %id)
BI114250 muscle, rhabdomyosarcoma .n 27 to 404 1 to 378       378/1024
(36 %)
4 diff
(99.7 %id)
DA664175   .n 27 to 597 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
CN395998 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .n 79 to 514 1 to 436       436/436
(100 %)
1 diff
(99.8 %id)
BE891362 melanotic melanoma, skin .n 714 to 1495 1 to 776   tiling clone,   776/887
(87 %)
18 diff
(98.0 %id)
BE250640 muscle, rhabdomyosarcoma .n 1148 to 1883 750 to 19   tiling clone,   732/1011
(72 %)
30 diff
(97.1 %id)
BE250671 muscle, rhabdomyosarcoma .n 1163 to 1914 776 to 20   tiling clone,   757/1040
(72 %)
16 diff
(98.5 %id)
DB191512 lung, tumor tissue .o 1 to 575 2 to 577   tiling clone, capped   576/576
(100 %)
2 diff
(99.7 %id)
BM456052 lymph, lymphoma, cell line .o 12 to 512 30 to 531       502/1250
(40 %)
12 diff
(99.1 %id)
CA489375   .o 391 to 1266 1 to 885   tiling clone,   885/894
(98 %)
14 diff
(98.5 %id)
AL549305 placenta, Placenta Cot 25-normalized .p 1 to 786 7 to 792   tiling clone,   791/792
(99 %)
5 diff
(99.4 %id)
AW411491 muscle, rhabdomyosarcoma .p 9 to 250 10 to 251       242/251
(96 %)
8 diff
(96.9 %id)
AU142292   .p 14 to 677 2 to 665   capped   664/664
(100 %)
0 diff
(100 %id)
BI255521 cervical carcinoma cell line, cervix .p 32 to 829 1 to 799   tiling clone,   799/803
(99 %)
5 diff
(99.4 %id)
BF307484 muscle, rhabdomyosarcoma .p 46 to 807 1 to 755       755/921
(81 %)
34 diff
(96.4 %id)
DA729859   .p 53 to 832 2 to 776   capped   775/775
(100 %)
6 diff
(99.3 %id)
BF310811 brain, neuroblastoma .p 61 to 726 1 to 655       655/757
(86 %)
16 diff
(97.9 %id)
BF307055 muscle, rhabdomyosarcoma .p 82 to 792 1 to 698       698/925
(75 %)
28 diff
(97.0 %id)
BF305472 muscle, rhabdomyosarcoma .p 82 to 742 1 to 655       655/655
(100 %)
14 diff
(97.9 %id)
BE294403 muscle, rhabdomyosarcoma .p 88 to 709 1 to 623       623/634
(98 %)
6 diff
(99.1 %id)
BE299921 muscle, rhabdomyosarcoma .p 103 to 839 1 to 737   tiling clone,   737/759
(97 %)
12 diff
(98.5 %id)
BE298448 muscle, rhabdomyosarcoma .p 116 to 772 1 to 658       656/661
(99 %)
17 diff
(97.5 %id)
AL573582 placenta, Placenta Cot 25-normalized .p 1276 to 2086 809 to 1   tiling clone,   809/810
(99 %)
12 diff
(98.6 %id)
DB383922   .p 1636 to 2118 483 to 1   tiling clone,   483/483
(100 %)
1 diff
(99.8 %id)
AW411492 muscle, rhabdomyosarcoma .p 1701 to 2098 398 to 1   tiling clone,   398/398
(100 %)
2 diff
(99.5 %id)
BI334769 cervical carcinoma cell line, cervix .q 1 to 768 1 to 766 L6C F7L W8G A9G A10S ... tiling clone,   766/768
(99 %)
9 diff
(98.9 %id)
DC356186   .r 1 to 579 1 to 579   tiling clone,   579/579
(100 %)
1 diff
(99.9 %id)
BQ954299 large cell carcinoma, lung .r 15 to 948 1 to 937 A189G R190Q S191V G192R L193A ... tiling clone,   937/939
(99 %)
12 diff
(98.8 %id)
DA051411   .s 1 to 590 2 to 591   tiling clone, capped   590/590
(100 %)
2 diff
(99.7 %id)
DA602321   .s 9 to 362 2 to 355   capped   354/354
(100 %)
1 diff
(99.8 %id)
BG828078 muscle, rhabdomyosarcoma .s 14 to 779 1 to 769   tiling clone,   769/772
(99 %)
8 diff
(99.0 %id)
BF304457 muscle, rhabdomyosarcoma .s 22 to 662 1 to 641       641/864
(74 %)
17 diff
(98.1 %id)
BF206061 muscle, rhabdomyosarcoma .s 38 to 790 1 to 741 L97C C98A Q99R R100P R101G ...     741/911
(81 %)
31 diff
(96.6 %id)
BF304937 muscle, rhabdomyosarcoma .s 38 to 793 1 to 748 L127W A128R V129L Y130H T131S ... tiling clone,   748/886
(84 %)
30 diff
(96.7 %id)
BF308856 muscle, rhabdomyosarcoma .s 38 to 793 1 to 743 Y155T M156C S157L D158T V159S ... tiling clone,   743/935
(79 %)
22 diff
(97.7 %id)
BG827468 muscle, rhabdomyosarcoma .s 38 to 790 1 to 774 Q12R T13L Q14R T15L E17K ... tiling clone,   661/850
(77 %)
47 diff
(94.5 %id)
BE297823 muscle, rhabdomyosarcoma .s 41 to 731 24 to 714       691/741
(93 %)
22 diff
(97.1 %id)
BF310125 muscle, rhabdomyosarcoma .s 41 to 793 6 to 750 T180W G181L L182I I183D D184Y ... tiling clone,   745/1064
(70 %)
20 diff
(98.2 %id)
BE300480 muscle, rhabdomyosarcoma .t 1 to 725 19 to 759 P3L P4L A5L T6L S7P ... tiling clone,   742/759
(97 %)
37 diff
(95.2 %id)
BF309442 muscle, rhabdomyosarcoma .t 1 to 695 2 to 698 C16V F17W G18A R19A L20R ... tiling clone,   698/916
(76 %)
15 diff
(98.4 %id)
BE299087 muscle, rhabdomyosarcoma .t 40 to 700 1 to 661   tiling clone,   661/714
(92 %)
11 diff
(98.5 %id)
BF206062 muscle, rhabdomyosarcoma .t 42 to 806 4 to 757   tiling clone,   754/759
(99 %)
30 diff
(96.1 %id)
BF305676 muscle, rhabdomyosarcoma .t 42 to 802 4 to 773   tiling clone,   768/887
(86 %)
34 diff
(96.2 %id)
BF305155 muscle, rhabdomyosarcoma .u 1 to 674 8 to 674   tiling clone,   674/894
(75 %)
18 diff
(98.0 %id)
BG827533 muscle, rhabdomyosarcoma .u 1 to 418 8 to 429       429/737
(58 %)
12 diff
(98.4 %id)
BG828902 muscle, rhabdomyosarcoma .u 1 to 854 8 to 865 E93D I94N E95G L96A L97A ... tiling clone,   865/918
(94 %)
19 diff
(98.0 %id)
BF204274 muscle, rhabdomyosarcoma .u 79 to 800 1 to 710 C98V Q99P R100A R101P A102G ... tiling clone,   710/711
(99 %)
18 diff
(97.5 %id)
BF310023 muscle, rhabdomyosarcoma .u 100 to 812 2 to 714 I53M A54P S55Q E56R N57T ... tiling clone,   713/870
(81 %)
30 diff
(96.6 %id)
DA373013 thalamus .va 1 to 613 2 to 614   tiling clone, capped   613/613
(100 %)
0 diff
(100 %id)
DA048088   .va 7 to 551 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA601128   .va 7 to 596 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
BF304526 muscle, rhabdomyosarcoma .va 11 to 682 1 to 665       665/768
(86 %)
20 diff
(97.4 %id)
BG824927 muscle, rhabdomyosarcoma .va 11 to 680 1 to 673       673/843
(79 %)
14 diff
(98.4 %id)
DA003148   .va 15 to 572 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA372876 thalamus .va 18 to 545 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
BI115424 muscle, rhabdomyosarcoma .va 36 to 425 1 to 393       393/1037
(37 %)
9 diff
(99.2 %id)
CR992693 T-Lymphocytes .va 36 to 822 1 to 788 exact tiling clone,   788/788
(100 %)
1 diff
(99.9 %id)
BE297754 muscle, rhabdomyosarcoma .va 40 to 577 35 to 576       542/576
(94 %)
11 diff
(98.1 %id)
BE297349 muscle, rhabdomyosarcoma .va 41 to 680 1 to 639       639/668
(95 %)
12 diff
(98.3 %id)
BE298644 muscle, rhabdomyosarcoma .va 47 to 627 1 to 581       583/581
(100 %)
6 diff
(99.0 %id)
AV683004 hepatocellular carcinoma .vb 1 to 579 25 to 600 P10R E98V I99E E100L L102C ... tiling clone,   572/636
(89 %)
8 diff
(98.8 %id)
BM787142 stomach .vc 1 to 563 1 to 563 exact tiling clone,   563/563
(100 %)
0 diff
(100 %id)
DA597551   .vd 1 to 552 2 to 553 exact tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
BG826616 muscle, rhabdomyosarcoma .ve 1 to 580 2 to 600 L5S T6D G7W P8A L9S ... tiling clone,   601/600
(100 %)
42 diff
(93.0 %id)
DA379305 thalamus .vf 1 to 578 2 to 579 exact tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
DB189224 lung, tumor tissue .vf 1 to 563 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB185907 liver, tumor tissue .vg 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
BM193445 leukopheresis .vh 1 to 460 7 to 467   tiling clone,   467/517
(90 %)
16 diff
(97.0 %id)
DC347930 tongue, tumor tissue .vh 433 to 1003 1 to 571   tiling clone,   571/571
(100 %)
0 diff
(100 %id)
DB184899 liver, tumor tissue .vi 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DA376208 thalamus .vj 1 to 561 2 to 562 exact tiling clone, capped   561/561
(100 %)
0 diff
(100 %id)
DA662799   .vk 1 to 541 2 to 542 exact tiling clone, capped   541/541
(100 %)
0 diff
(100 %id)
BG826349 muscle, rhabdomyosarcoma .vl 1 to 520 5 to 524   tiling clone,   524/524
(100 %)
3 diff
(99.5 %id)
BE295244 muscle, rhabdomyosarcoma .vl 17 to 596 1 to 654   tiling clone, available from MGC,   493/654
(75 %)
47 diff
(92.9 %id)
BE294898 muscle, rhabdomyosarcoma .vl 34 to 679 1 to 658   tiling clone,   658/659
(99 %)
28 diff
(95.8 %id)
BE297566 muscle, rhabdomyosarcoma .vl 35 to 681 1 to 655 A27R G28W Q29H A30R R31P ... tiling clone,   655/734
(89 %)
30 diff
(96.0 %id)
BE297438 muscle, rhabdomyosarcoma .vl 250 to 599 1 to 354   tiling clone,   354/356
(99 %)
9 diff
(97.5 %id)
DA077006 cerebellum .vm 1 to 568 2 to 570 exact tiling clone, capped   569/573
(99 %)
2 diff
(99.7 %id)
DA645146   .vn 1 to 576 9 to 584 exact tiling clone, capped   583/583
(100 %)
1 diff
(99.9 %id)
DA657446   .vo 1 to 456 2 to 457 exact tiling clone, capped   456/456
(100 %)
0 diff
(100 %id)
DA635026 Kidney .vp 1 to 568 3 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
DB154656 thymus .vq 1 to 565 2 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DA315749 hippocampus .vr 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
1 diff
(99.9 %id)
DA947558 Spleen .vr 3 to 590 2 to 587   capped   586/586
(100 %)
4 diff
(99.4 %id)
DA233529 brain .vr 5 to 591 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DB121875 thymus .vr 5 to 513 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
AK055053 brain .vr 30 to 3445 1 to 3412 exact tiling clone, available from FLJ,   3412/3412
(100 %)
4 diff
(99.9 %id)
DA011201 adrenal gland .vr 31 to 582 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA197604 brain .vr 31 to 585 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA556572   .vr 31 to 581 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA557648   .vr 31 to 613 2 to 581   capped   580/580
(100 %)
4 diff
(99.4 %id)
DA875825 Prostate .vr 31 to 602 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BM787617 stomach .vr 31 to 673 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
DA918629 small intestine .vr 31 to 599 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB133840 thymus .vr 31 to 559 2 to 530   capped   529/535
(98 %)
1 diff
(99.9 %id)
DB150516 thymus .vr 31 to 585 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
DB151865 thymus .vr 31 to 559 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
DB159789 thymus .vr 31 to 622 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DB280048 uterus .vr 31 to 582 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA097995 cerebellum .vr 32 to 601 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA110775 cerebellum .vr 32 to 588 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
CR991719 T-Lymphocytes .vr 32 to 739 1 to 709       709/709
(100 %)
3 diff
(99.6 %id)
DA123179 cerebellum .vr 34 to 593 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
DA263649 caudate nucleus .vr 39 to 618 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA098446 cerebellum .vr 42 to 592 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA125248 cerebellum .vr 42 to 583 2 to 540   capped   539/539
(100 %)
3 diff
(99.5 %id)
DA196150 amygdala .vr 42 to 610 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA409247 thalamus .vr 42 to 619 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
DA809986 brain .vr 42 to 580 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA935845 Spleen .vr 42 to 645 2 to 601   capped   600/600
(100 %)
3 diff
(99.5 %id)
DA942865 Spleen .vr 42 to 622 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DB105087 thymus .vr 42 to 590 2 to 550   capped   549/549
(100 %)
2 diff
(99.7 %id)
DB157325 thymus .vr 42 to 611 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
AW863679 stomach_normal .vr 56 to 461 441 to 36       406/456
(89 %)
1 diff
(99.8 %id)
BE840937 stomach_normal .vr 56 to 461 431 to 25       407/449
(90 %)
0 diff
(100 %id)
DA121551 cerebellum .vr 60 to 598 2 to 536   capped   535/535
(100 %)
2 diff
(99.7 %id)
DA288914 hippocampus .vr 62 to 640 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA042982 bladder .vr 63 to 647 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BX476970   .vr 491 to 1096 1 to 606   tiling clone,   606/606
(100 %)
2 diff
(99.7 %id)
BF808327 colon_ins .vr 520 to 697 1 to 178       178/178
(100 %)
6 diff
(96.7 %id)
BF525802 brain, glioblastoma with EGFR amplification .vr 571 to 1384 1 to 806       806/855
(94 %)
31 diff
(96.4 %id)
DB102252 thymus .vr 861 to 1411 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
BQ378863 uterus_tumor .vr 2196 to 2348 157 to 5       153/157
(97 %)
0 diff
(100 %id)
DB303796 brain .vr 2919 to 3445 527 to 1       527/527
(100 %)
0 diff
(100 %id)
AA328880   .vr 2933 to 3168 2 to 237       236/237
(99 %)
4 diff
(98.4 %id)
BE297253 muscle, rhabdomyosarcoma Gene SHMT2, variant not shown              
BI115228 muscle, rhabdomyosarcoma Gene SHMT2, variant not shown              
111 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk, .vl, .vm, .vn, .vo, .vp, .vq, .vr Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI