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Gene SH3YL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
401 supporting clones for gene SH3YL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BF986134 placenta_normal .a 1 to 305 331 to 27   tiling clone,   305/331
(92 %)
0 diff
(100 %id)
DA188179 amygdala .a 67 to 607 2 to 536   tiling clone, to resequence, capped   535/535
(100 %)
7 diff
(98.7 %id)
DB303245 amygdala .a 1317 to 1870 555 to 1   tiling clone, to resequence,   555/555
(100 %)
2 diff
(99.7 %id)
NM_015677.2   .b 1 to 1785 2 to 1786 exact RefSeq, AAA   1786/1786
(100 %)
0 diff
(100 %id)
BC008374 Bladder, carcinoma .b 62 to 1776 1 to 1715   tiling clone, available from MGC, AAA   1715/1715
(100 %)
0 diff
(100 %id)
CR622262 Placenta Cot 25-normalized .b 85 to 1726 1 to 1642       1642/1642
(100 %)
0 diff
(100 %id)
AL576921 placenta, Placenta Cot 25-normalized .b 238 to 1256 1010 to 1       1012/1050
(96 %)
14 diff
(98.7 %id)
CN386257 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 497 to 1150 9 to 661       653/672
(97 %)
7 diff
(99.0 %id)
TI_149306872   .b 616 to 1288 774 to 102   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 673/925
(72 %)
1 diff
(99.9 %id)
TI_149281597   .b 629 to 1141 528 to 18   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 511/788
(64 %)
3 diff
(99.7 %id)
TI_149304679   .b 629 to 1143 602 to 88   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 515/1040
(49 %)
0 diff
(100 %id)
BM971293 lung, Primary Lung Epithelial Cells .b 629 to 1143 531 to 17   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 515/523
(98 %)
0 diff
(100 %id)
BU686677 lung, Primary Lung Epithelial Cells .b 677 to 1288 630 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 612/612
(100 %)
0 diff
(100 %id)
CN386255 embryonic stem cells, DMSO-treated H9 cellline .b 695 to 1416 9 to 730       722/730
(98 %)
6 diff
(99.2 %id)
BG569778 lung .b 783 to 1467 1 to 688       688/688
(100 %)
8 diff
(98.9 %id)
AL577212 placenta, Placenta Cot 25-normalized .b 792 to 1709 923 to 8       916/929
(98 %)
0 diff
(100 %id)
AA421414 ovarian tumor, ovary .b 916 to 1228 1 to 313       313/313
(100 %)
0 diff
(100 %id)
BG719168 testis .c 1 to 448 1 to 454       454/454
(100 %)
15 diff
(96.7 %id)
BI560316 testis .c 1 to 732 1 to 736   available from MGC,   736/772
(95 %)
26 diff
(96.7 %id)
BC043234 testis .c 4 to 2731 4 to 2731 exact tiling clone, available from MGC, AAA   2728/2728
(100 %)
2 diff
(100.0 %id)
TI_44348730   .c 6 to 732 119 to 849       731/885
(82 %)
28 diff
(96.9 %id)
T18581   .c 243 to 540 13 to 312       300/312
(96 %)
8 diff
(97.5 %id)
BE297780 muscle, rhabdomyosarcoma .c 627 to 1239 43 to 652       610/656
(92 %)
7 diff
(99.0 %id)
BE269888 Burkitt lymphoma, lymph .c 638 to 1274 1 to 640       640/640
(100 %)
12 diff
(98.2 %id)
DA716915   .c 1007 to 1559 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
TI_1948122601   .c 1671 to 2241 131 to 703   fully sequenced,   576/706
(81 %)
7 diff
(99.1 %id)
TI_1948122081   .c 1672 to 2530 124 to 983       863/1358
(63 %)
23 diff
(98.4 %id)
TI_1948122248   .c 1672 to 2709 124 to 1159   fully sequenced, AAA   1039/1162
(89 %)
35 diff
(97.0 %id)
TI_1948122250   .c 1672 to 2708 127 to 1167   fully sequenced,   1044/1170
(89 %)
42 diff
(96.5 %id)
TI_1948122079   .c 1673 to 2705 118 to 1148       1039/1361
(76 %)
46 diff
(96.7 %id)
TI_1948122430   .c 1673 to 2688 128 to 1146   fully sequenced,   1021/1148
(88 %)
56 diff
(95.2 %id)
AL533098 adult brain, brain .c 1678 to 2516 1 to 840       840/843
(99 %)
13 diff
(98.5 %id)
AL554556 placenta, Placenta Cot 25-normalized .c 1679 to 2581 1 to 905       905/905
(100 %)
10 diff
(98.9 %id)
BG822497 adenocarcinoma cell line, colon .c 1808 to 2516 1 to 718       718/769
(93 %)
20 diff
(97.4 %id)
TI_1948122249   .c 1938 to 2705 892 to 124   fully sequenced,   769/892
(86 %)
1 diff
(99.9 %id)
TI_1948122251   .c 1938 to 2705 892 to 126   fully sequenced,   767/892
(85 %)
2 diff
(99.8 %id)
TI_1948122431   .c 2180 to 2705 649 to 124   fully sequenced,   526/649
(81 %)
0 diff
(100 %id)
TI_1948122602   .c 2180 to 2705 647 to 122   fully sequenced,   526/647
(81 %)
0 diff
(100 %id)
BE697746 colon .c 2464 to 2699 245 to 10       236/245
(96 %)
0 diff
(100 %id)
BM727730 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 2651 to 3150 1 to 500   tiling clone, Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 500/500
(100 %)
1 diff
(99.8 %id)
BE222018 Kidney .c 3129 to 3603 475 to 1   tiling clone,   475/475
(100 %)
0 diff
(100 %id)
BM681159 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 3157 to 3601 462 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 444/444
(100 %)
2 diff
(99.6 %id)
NM_001159597.1   .d 1 to 1728 2 to 1729 exact RefSeq, AAA   1729/1729
(100 %)
0 diff
(100 %id)
DB244375 uterus, tumor tissue .d 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
BG401755 Kidney .d 29 to 743 1 to 711       711/851
(83 %)
31 diff
(96.4 %id)
BM743056 stomach .d 32 to 683 1 to 652       652/652
(100 %)
1 diff
(99.9 %id)
BM771566 stomach .d 32 to 732 1 to 701       701/701
(100 %)
1 diff
(99.9 %id)
BP276850 Kidney .d 33 to 615 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DB125972 thymus .d 34 to 595 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
AK026507   .d 36 to 1712 1 to 1677 exact tiling clone, available from FLJ, AAA   1677/1677
(100 %)
2 diff
(99.9 %id)
BP335087 salivary gland .d 36 to 619 1 to 584       584/584
(100 %)
5 diff
(99.2 %id)
DA542400 lung .d 37 to 542 2 to 507   capped   506/506
(100 %)
0 diff
(100 %id)
TI_57202409   .d 39 to 867 27 to 860       834/875
(95 %)
28 diff
(96.8 %id)
BI765730 pooled colon, kidney, stomach .d 43 to 709 31 to 696       666/696
(95 %)
8 diff
(98.9 %id)
TI_57149131   .d 43 to 709 31 to 696       666/696
(95 %)
8 diff
(98.9 %id)
BC008375 Bladder, carcinoma .d 44 to 1715 1 to 1672 exact available from MGC, AAA   1672/1672
(100 %)
3 diff
(99.9 %id)
BC013286 Bladder, carcinoma .d 44 to 590 1 to 547   available from MGC, AAA   547/549
(99 %)
3 diff
(99.5 %id)
DA632626 Kidney .d 44 to 619 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
BI824322 pooled brain, lung, testis .d 47 to 867 1 to 824       824/839
(98 %)
22 diff
(97.4 %id)
BG661333 Islets of Langerhans, Pancreas .d 47 to 597 1 to 551       551/551
(100 %)
1 diff
(99.9 %id)
BG661352 Islets of Langerhans, Pancreas .d 50 to 520 1 to 471       471/471
(100 %)
4 diff
(99.2 %id)
BQ271368 Pancreas, Purified pancreatic islet .d 50 to 623 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
AA418518 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 51 to 626 1 to 576       576/576
(100 %)
0 diff
(100 %id)
BI907167 leukocyte .d 51 to 725 1 to 686       666/828
(80 %)
19 diff
(97.8 %id)
TI_57234149   .d 51 to 725 28 to 713       666/855
(77 %)
25 diff
(97.1 %id)
AA376908 small intestine .d 52 to 355 1 to 308       308/308
(100 %)
7 diff
(97.8 %id)
CV572385 cornea, eye .d 52 to 675 1 to 624       624/624
(100 %)
0 diff
(100 %id)
H26805 breast .d 53 to 442 9 to 411       403/415
(97 %)
28 diff
(93.3 %id)
BG434023 Kidney .d 62 to 909 1 to 839       842/840
(100 %)
43 diff
(94.9 %id)
BG661340 Islets of Langerhans, Pancreas .d 62 to 488 1 to 422       422/424
(99 %)
14 diff
(96.7 %id)
AA359405 lung .d 67 to 386 1 to 320       320/320
(100 %)
0 diff
(100 %id)
AW959319   .d 68 to 581 1 to 513       513/513
(100 %)
20 diff
(96.2 %id)
BE567135 bladder, carcinoma, cell line .d 72 to 588 5 to 521   available from MGC,   517/844
(61 %)
4 diff
(99.6 %id)
BG661324 Islets of Langerhans, Pancreas .d 74 to 560 1 to 487       487/487
(100 %)
0 diff
(100 %id)
BQ631794 Pancreas, Purified pancreatic islet .d 74 to 593 1 to 520       520/520
(100 %)
0 diff
(100 %id)
TI_1948105338   .d 78 to 405 131 to 458   fully sequenced, AAA   331/461
(71 %)
8 diff
(98.3 %id)
TI_1948105520   .d 78 to 405 127 to 454   fully sequenced,   331/457
(72 %)
7 diff
(98.5 %id)
TI_1948105697   .d 78 to 405 119 to 446   fully sequenced,   331/449
(73 %)
7 diff
(98.5 %id)
CR457361   .d 85 to 1055 2 to 972       971/972
(99 %)
0 diff
(100 %id)
CR595739 Placenta Cot 25-normalized .d 85 to 1681 1 to 1597       1597/1597
(100 %)
0 diff
(100 %id)
CR623594 Placenta Cot 25-normalized .d 85 to 1682 1 to 1598   tiling clone,   1598/1598
(100 %)
0 diff
(100 %id)
AL543547 placenta, Placenta Cot 25-normalized .d 85 to 816 1 to 732   fully sequenced,   732/732
(100 %)
1 diff
(99.9 %id)
AL547656 placenta, Placenta Cot 25-normalized .d 85 to 840 1 to 756   fully sequenced,   756/756
(100 %)
0 diff
(100 %id)
CN347359 embryonic stem cells, cell lines H1, H7, andH9 .d 256 to 893 1 to 638       638/638
(100 %)
4 diff
(99.4 %id)
TI_1948105339   .d 344 to 1054 839 to 129   fully sequenced,   711/839
(84 %)
1 diff
(99.9 %id)
TI_1948105521   .d 344 to 1054 840 to 130   fully sequenced,   711/840
(84 %)
2 diff
(99.8 %id)
TI_1948105698   .d 347 to 1054 835 to 127   fully sequenced,   709/835
(84 %)
3 diff
(99.7 %id)
N80107 multiple sclerosis lesions .d 656 to 908 1 to 253       253/258
(98 %)
2 diff
(99.3 %id)
AW966953   .d 664 to 1301 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
BF216465 brain, glioblastoma .d 675 to 1343 1 to 671       671/856
(78 %)
22 diff
(97.5 %id)
BQ271076 Pancreas, Purified pancreatic islet .d 684 to 1230 547 to 1       547/547
(100 %)
0 diff
(100 %id)
AL543517 placenta, Placenta Cot 25-normalized .d 755 to 1661 929 to 22   fully sequenced,   908/929
(97 %)
2 diff
(99.8 %id)
AA233187 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 767 to 1231 465 to 1       465/465
(100 %)
0 diff
(100 %id)
AL547632 placenta, Placenta Cot 25-normalized .d 810 to 1682 874 to 1   fully sequenced,   874/874
(100 %)
8 diff
(99.1 %id)
BQ632093 Pancreas, Purified pancreatic islet .d 1098 to 1715 618 to 1       618/618
(100 %)
0 diff
(100 %id)
N64674 multiple sclerosis lesions .d 1148 to 1721 586 to 1       586/586
(100 %)
25 diff
(95.8 %id)
AA418487 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1216 to 1722 514 to 8       507/514
(98 %)
0 diff
(100 %id)
AA417057   .e 1 to 489 5 to 493   tiling clone,   493/493
(100 %)
1 diff
(99.8 %id)
BP337132 coronary artery .e 156 to 739 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
FN132453 breast carcinoma .e 201 to 296 94 to 1     Submitted on the opposite strand 94/96
(97 %)
2 diff
(98.0 %id)
BE719613 head_neck .e 307 to 483 187 to 11       177/195
(90 %)
0 diff
(100 %id)
FN116645 breast carcinoma .e 334 to 416 85 to 1     Submitted on the opposite strand 85/90
(94 %)
2 diff
(97.8 %id)
BX095549 liver and spleen .e 434 to 937 1 to 504   tiling clone,   504/504
(100 %)
0 diff
(100 %id)
AA417079   .e 1179 to 1592 418 to 5   tiling clone,   414/418
(99 %)
0 diff
(100 %id)
CD686379 normal nasopharynx .f 1 to 598 23 to 620   tiling clone,   598/620
(96 %)
9 diff
(98.6 %id)
CD521872 pooled .f 8 to 730 1 to 727       725/902
(80 %)
14 diff
(98.5 %id)
BG433840 Kidney .f 9 to 562 1 to 558       558/1028
(54 %)
8 diff
(99.3 %id)
CN347357 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 20 to 810 1 to 791   tiling clone,   791/791
(100 %)
0 diff
(100 %id)
BQ420455 embryonal carcinoma, cell line, testis .f 595 to 1446 1 to 858   tiling clone,   858/874
(98 %)
7 diff
(99.2 %id)
DA271598 caudate nucleus .g 1 to 551 2 to 552   tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DB057457 testis .g 1 to 532 2 to 534   capped   533/533
(100 %)
2 diff
(99.7 %id)
DA605212   .g 3 to 570 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB070313 testis .g 28 to 555 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
BP194340 brain .g 39 to 621 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP249257 Kidney .g 39 to 612 1 to 574       574/582
(98 %)
1 diff
(99.9 %id)
CB961356 placenta, pre-eclamptic placenta .g 39 to 620 28 to 611       584/797
(73 %)
21 diff
(97.4 %id)
DA068014 cerebellum .g 40 to 618 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA139297 alzheimer cortex .g 40 to 668 2 to 630   capped   629/630
(99 %)
1 diff
(99.9 %id)
BP215737 corpus callosum .g 40 to 630 1 to 588       588/588
(100 %)
6 diff
(99.0 %id)
DA502598 brain .g 40 to 600 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DA533995 brain .g 40 to 613 2 to 575   capped   574/575
(99 %)
0 diff
(100 %id)
BP215703 corpus callosum .g 41 to 625 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DA064112 cerebellum .g 42 to 604 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BP310257 brain .g 44 to 625 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA782306 brain .g 44 to 617 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BI669442 brain, hypothalamus .g 48 to 500 1 to 453       453/453
(100 %)
5 diff
(98.9 %id)
BP227196   .g 53 to 633 1 to 581       581/581
(100 %)
0 diff
(100 %id)
TI_44344977   .g 53 to 500 89 to 536       448/536
(83 %)
6 diff
(98.9 %id)
BI909251 leukocyte .g 54 to 818 1 to 765   tiling clone,   765/765
(100 %)
0 diff
(100 %id)
TI_57235326   .g 54 to 818 62 to 826       765/826
(92 %)
6 diff
(99.3 %id)
DA958820 Spleen .g 54 to 610 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB269882 uterus .g 54 to 605 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB477033 hippocampus .g 60 to 567 1 to 508       508/510
(99 %)
4 diff
(99.3 %id)
TI_57219527   .g 61 to 839 34 to 814       781/814
(95 %)
15 diff
(98.2 %id)
BI753769 brain .g 62 to 839 1 to 780   tiling clone,   780/780
(100 %)
9 diff
(98.9 %id)
BI771219 pooled lung and spleen .g 70 to 818 1 to 757       753/757
(99 %)
10 diff
(98.7 %id)
TI_57182661   .g 70 to 818 34 to 790       753/790
(95 %)
10 diff
(98.8 %id)
BI824237 pooled brain, lung, testis .g 78 to 660 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
CN343123 embryonic stem cells, cell lines H1, H7, andH9 .h 1 to 244 1 to 245   tiling clone,   245/245
(100 %)
3 diff
(98.8 %id)
AK026586   .h 182 to 2174 1 to 1993 exact tiling clone, available from FLJ, AAA   1993/1993
(100 %)
3 diff
(99.9 %id)
CX758922 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .h 200 to 922 29 to 742     Submitted on the opposite strand 716/791
(90 %)
19 diff
(97.6 %id)
BE439916 Trabecular meshwork .h 373 to 995 1 to 623       623/623
(100 %)
1 diff
(99.9 %id)
BP294239 Liver .h 427 to 1007 1 to 581       581/582
(99 %)
3 diff
(99.5 %id)
BF028730 bladder, carcinoma, cell line .h 485 to 1022 1 to 534       532/736
(72 %)
21 diff
(97.2 %id)
TI_57202317   .h 490 to 1069 76 to 656       583/656
(88 %)
7 diff
(99.0 %id)
BX386480 Placenta Cot 25-normalized .h 491 to 1274 1 to 788       786/788
(99 %)
11 diff
(98.7 %id)
CV027250 mixed .h 491 to 1123 2 to 634       633/634
(99 %)
2 diff
(99.7 %id)
CV027326 mixed .h 491 to 1111 2 to 622       621/622
(99 %)
1 diff
(99.9 %id)
BG433979 Kidney .h 491 to 1237 10 to 754       744/754
(98 %)
13 diff
(98.3 %id)
TI_57179274   .h 491 to 1319 31 to 864       833/865
(96 %)
24 diff
(97.3 %id)
BI771156 pooled lung and spleen .h 492 to 1319 1 to 833       833/834
(99 %)
20 diff
(97.7 %id)
BF028832 bladder, carcinoma, cell line .h 502 to 1192 1 to 691       691/826
(83 %)
21 diff
(97.5 %id)
CN347360 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 508 to 1069 1 to 563       563/563
(100 %)
1 diff
(99.9 %id)
CB216749 normal endometrium, mid-secretory phase,cycle day 23, uterus .h 607 to 1191 1 to 586       586/586
(100 %)
0 diff
(100 %id)
R20053 whole brain .h 632 to 931 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
BI335880 skin .h 944 to 1326 1 to 383       383/383
(100 %)
0 diff
(100 %id)
AW967570   .h 1573 to 2178 606 to 1     Submitted on the opposite strand 606/609
(99 %)
1 diff
(99.9 %id)
BF839424 head_neck .h 1581 to 1718 1 to 137   tiling clone,   137/137
(100 %)
8 diff
(94.2 %id)
TI_149299246   .h 1588 to 2177 668 to 81   AAA   588/779
(75 %)
0 diff
(100 %id)
AW974243   .h 1606 to 2170 566 to 1     Submitted on the opposite strand 566/566
(100 %)
4 diff
(99.3 %id)
AI917873 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .h 1612 to 2174 562 to 1       562/562
(100 %)
2 diff
(99.7 %id)
CK821806 Pancreas, Purified pancreatic islet .h 1617 to 2187 590 to 20   tiling clone, AAA Submitted on the opposite strand 571/571
(100 %)
0 diff
(100 %id)
BX504179.
matches multiple genes
  .h 1625 to 2187 563 to 1     also hits gene ODZ4 563/563
(100 %)
0 diff
(100 %id)
BU677873 lung .h 1631 to 2171 558 to 19   AAA   540/540
(100 %)
1 diff
(99.9 %id)
AI355065 ovary, tumor, 5 pooled (see description) .h 1659 to 2170 513 to 1       513/513
(100 %)
5 diff
(99.1 %id)
AI378782 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h 1670 to 2171 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AA808963 germinal center B-cells, tonsil .h 1675 to 2181 513 to 7       507/513
(98 %)
0 diff
(100 %id)
DB545709 hippocampus .h 1677 to 2174 1 to 498     Submitted on the opposite strand 498/498
(100 %)
1 diff
(99.8 %id)
AA864974 Kidney .h 1681 to 2181 503 to 3       501/503
(99 %)
0 diff
(100 %id)
AA864807 Kidney .h 1701 to 2174 474 to 1       474/474
(100 %)
1 diff
(99.8 %id)
AI523152 aorta .h 1702 to 2174 473 to 1       473/473
(100 %)
1 diff
(99.8 %id)
AW090547 brain, tumor, 5 pooled (see description) .h 1708 to 2151 445 to 1       445/447
(99 %)
6 diff
(98.7 %id)
AI559180 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1710 to 2172 464 to 2       463/464
(99 %)
0 diff
(100 %id)
AI803411   .h 1719 to 2179 475 to 15   AAA   461/461
(100 %)
0 diff
(100 %id)
AI569539 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h 1724 to 2181 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AA587779 colon, colon tumor RER+ .h 1726 to 2171 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AI817637 normal prostate, Prostate .h 1726 to 2180 457 to 1       457/457
(100 %)
4 diff
(99.2 %id)
AI955748 adenocarcinoma, Pancreas .h 1726 to 2174 461 to 13   AAA   449/449
(100 %)
6 diff
(98.7 %id)
FN133504 breast carcinoma .h 1734 to 1827 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
DB545908 hippocampus .h 1735 to 2173 1 to 439     Submitted on the opposite strand 439/440
(99 %)
4 diff
(99.1 %id)
AI310977 2 pooled tumors (clear cell type), Kidney .h 1740 to 2171 456 to 25   AAA   432/432
(100 %)
6 diff
(98.7 %id)
AA568167 colon, colon tumor RER+ .h 1742 to 2176 437 to 3       435/437
(99 %)
0 diff
(100 %id)
AA846810 parathyroid gland, parathyroid tumor .h 1745 to 2168 451 to 28   AAA   424/426
(99 %)
0 diff
(100 %id)
AI858525 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1748 to 2174 451 to 25   AAA   427/427
(100 %)
1 diff
(99.8 %id)
DB534008 hippocampus .h 1749 to 2174 1 to 425     Submitted on the opposite strand 425/425
(100 %)
12 diff
(97.2 %id)
AW778774 colon, moderately-differentiated adenocarcinoma .h 1749 to 2180 432 to 1       432/432
(100 %)
1 diff
(99.8 %id)
AI921965 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .h 1751 to 2178 428 to 1       428/428
(100 %)
0 diff
(100 %id)
AW304831 brain, three pooled meningiomas .h 1755 to 2179 425 to 1       425/425
(100 %)
1 diff
(99.8 %id)
AI801055 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h 1757 to 2179 433 to 11   AAA   423/423
(100 %)
1 diff
(99.8 %id)
AA806621 germinal center B cell .h 1760 to 2181 424 to 3       422/424
(99 %)
0 diff
(100 %id)
BM311479 Pancreas, Purified pancreatic islet .h 1762 to 2187 436 to 11   AAA   426/426
(100 %)
0 diff
(100 %id)
BF111461 pooled .h 1766 to 2170 424 to 20   AAA   405/405
(100 %)
0 diff
(100 %id)
BI439758 Pancreas, Purified pancreatic islet .h 1768 to 2189 422 to 1       422/422
(100 %)
6 diff
(98.6 %id)
AI093915 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h 1768 to 2172 408 to 4       405/408
(99 %)
0 diff
(100 %id)
AA250800.
matches multiple genes
germinal center B cell .h 1770 to 2181 413 to 2     also hits gene LY9 412/413
(99 %)
0 diff
(100 %id)
AI682936 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1773 to 2174 417 to 15   AAA   403/403
(100 %)
3 diff
(99.3 %id)
DB513878 testis .h 1776 to 2176 1 to 402     Submitted on the opposite strand 402/404
(99 %)
4 diff
(99.1 %id)
AI241006 Kidney .h 1776 to 2170 397 to 3       395/397
(99 %)
0 diff
(100 %id)
AI560669 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1776 to 2151 376 to 1       376/376
(100 %)
1 diff
(99.8 %id)
H97028 melanocyte .h 1782 to 2174 394 to 1       394/394
(100 %)
1 diff
(99.8 %id)
AI016661 Kidney .h 1782 to 2171 403 to 14   AAA   390/390
(100 %)
1 diff
(99.8 %id)
AI634346 Kidney, renal cell tumor .h 1785 to 2170 386 to 1       386/386
(100 %)
1 diff
(99.8 %id)
AI913884 colon .h 1788 to 2170 385 to 2       384/385
(99 %)
0 diff
(100 %id)
AA838764 parathyroid gland, parathyroid tumor .h 1789 to 2161 392 to 20       373/392
(95 %)
0 diff
(100 %id)
AI766242 Kidney .h 1790 to 2170 379 to 1       379/379
(100 %)
5 diff
(98.7 %id)
AA988603 carcinoid, lung .h 1791 to 2175 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AI819279 2 pooled tumors (clear cell type), Kidney .h 1791 to 2176 388 to 3       386/388
(99 %)
0 diff
(100 %id)
T77926 liver and spleen .h 1792 to 2140 353 to 1     Submitted on the opposite strand 353/394
(89 %)
30 diff
(92.4 %id)
C00313   .h 1795 to 2131 1 to 344       344/350
(98 %)
15 diff
(95.8 %id)
BY999254   .h 1795 to 2180 1 to 386     Submitted on the opposite strand 386/388
(99 %)
6 diff
(98.5 %id)
AI798499 ovary, tumor, 5 pooled (see description) .h 1804 to 2176 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AW769213 colon, moderately-differentiated adenocarcinoma .h 1804 to 2172 373 to 5       369/373
(98 %)
0 diff
(100 %id)
BM457362 embryonal carcinoma, cell line, testis .h 1815 to 2179 182 to 545   AAA   364/545
(66 %)
6 diff
(98.9 %id)
BU072052 Pancreas, Purified pancreatic islet .h 1821 to 2179 10 to 368   fully sequenced, AAA   359/368
(97 %)
6 diff
(98.4 %id)
BM989820 lung, Lung Focal Fibrosis .h 1822 to 2187 384 to 19   AAA   366/390
(93 %)
3 diff
(99.3 %id)
BU954226 mixed (pool of 40 RNAs) .h 1823 to 2176 1 to 354       354/357
(99 %)
3 diff
(99.2 %id)
AW518290 adenocarcinoma, Pancreas .h 1832 to 2171 350 to 11   AAA   340/340
(100 %)
2 diff
(99.5 %id)
FN050863 breast carcinoma .h 1849 to 1963 116 to 1     Submitted on the opposite strand 116/116
(100 %)
3 diff
(97.5 %id)
R37077 whole brain .h 1850 to 2189 348 to 2       347/350
(99 %)
0 diff
(100 %id)
AI051398   .h 1850 to 2181 338 to 7       332/338
(98 %)
0 diff
(100 %id)
AI031730 parathyroid gland, parathyroid tumor .h 1857 to 2181 332 to 7       326/332
(98 %)
0 diff
(100 %id)
BU076045 Pancreas, Purified pancreatic islet .h 1860 to 2178 319 to 1   fully sequenced,   319/319
(100 %)
0 diff
(100 %id)
AA977884 2 pooled tumors (clear cell type), Kidney .h 1895 to 2189 302 to 8   tiling clone,   295/302
(97 %)
0 diff
(100 %id)
AI696576 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1897 to 2174 291 to 14   AAA   278/278
(100 %)
0 diff
(100 %id)
BP417722 small intestine .h 1898 to 2176 1 to 279     Submitted on the opposite strand 279/281
(99 %)
1 diff
(99.7 %id)
AI261718 Kidney .h 1904 to 2171 268 to 1       268/268
(100 %)
5 diff
(98.2 %id)
AI621339 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .h 1915 to 2171 279 to 23   AAA   257/257
(100 %)
1 diff
(99.7 %id)
AI373730 Kidney .h 1955 to 2174 220 to 1       220/220
(100 %)
0 diff
(100 %id)
BF195854 Kidney .h 1965 to 2181 223 to 7       217/223
(97 %)
0 diff
(100 %id)
AA494108 colon .h 1988 to 2181 194 to 1       194/194
(100 %)
0 diff
(100 %id)
FN131994 breast carcinoma .h 1993 to 2088 1 to 96       96/97
(98 %)
1 diff
(99.0 %id)
FN160551 breast carcinoma .h 2001 to 2099 1 to 99       99/99
(100 %)
0 diff
(100 %id)
FN171893 breast carcinoma .h 2014 to 2116 1 to 103       103/103
(100 %)
0 diff
(100 %id)
AA977886 2 pooled tumors (clear cell type), Kidney .h 2034 to 2189 163 to 8       156/163
(95 %)
0 diff
(100 %id)
FN148747 breast carcinoma .h 2037 to 2124 1 to 85       85/96
(88 %)
4 diff
(95.9 %id)
AA654688   .h 2098 to 2149 52 to 1       52/52
(100 %)
0 diff
(100 %id)
FN052675 breast carcinoma .h 2102 to 2168 1 to 67       67/73
(91 %)
1 diff
(98.7 %id)
FN049547 breast carcinoma .h 2112 to 2172 1 to 61       61/65
(93 %)
1 diff
(98.5 %id)
AL050373 uterus .i 1 to 1953 13 to 1965 exact tiling clone, available from DKFZ, AAA   1953/1953
(100 %)
2 diff
(99.9 %id)
TI_57171188   .j 1 to 825 35 to 869       839/892
(94 %)
20 diff
(97.8 %id)
BI830640 brain, medulla .j 1 to 825 1 to 835   tiling clone,   833/858
(97 %)
14 diff
(98.4 %id)
BG538086 lung .j 137 to 830 1 to 699       699/859
(81 %)
35 diff
(96.0 %id)
BQ058030 lymph, lymphoma, cell line .j 178 to 896 1 to 719   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 719/719
(100 %)
0 diff
(100 %id)
BQ064210 lymph, lymphoma, cell line .j 178 to 896 1 to 719   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 719/719
(100 %)
0 diff
(100 %id)
BQ065806 lymph, lymphoma, cell line .j 178 to 894 1 to 717   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 717/720
(99 %)
1 diff
(99.9 %id)
BQ642068 lymph, lymphoma, cell line .j 178 to 896 1 to 719   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 719/719
(100 %)
0 diff
(100 %id)
BP216141 corpus callosum .k 1 to 583 1 to 582   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
BP341231 stomach mucosa .k 1 to 581 1 to 580   tiling clone,   580/580
(100 %)
3 diff
(99.5 %id)
BP362401 thalamus .k 43 to 627 1 to 583       583/583
(100 %)
5 diff
(99.2 %id)
DA059572 cerebellum .k 44 to 599 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA545013   .k 44 to 615 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
AK292312 testis .k 53 to 1331 1 to 1279 I8V V45M tiling clone,   1279/1279
(100 %)
2 diff
(99.9 %id)
CB994173 placenta, pre-eclamptic placenta .k 53 to 579 28 to 556       529/896
(59 %)
19 diff
(97.9 %id)
BP335535 coronary artery .k 53 to 636 1 to 584   tiling clone,   584/584
(100 %)
1 diff
(99.9 %id)
DB036254 testis .k 54 to 568 2 to 517   capped   516/516
(100 %)
2 diff
(99.7 %id)
CN386256 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .k 343 to 550 1 to 208       208/208
(100 %)
4 diff
(98.1 %id)
FN062706 breast carcinoma .l 1 to 71 1 to 71   tiling clone,   71/71
(100 %)
0 diff
(100 %id)
DB076978 testis .l 40 to 569 2 to 531   tiling clone, capped   530/530
(100 %)
2 diff
(99.7 %id)
DA797735 brain .l 168 to 727 2 to 562   capped   561/561
(100 %)
3 diff
(99.5 %id)
AL704713 human skeletal muscle .l 172 to 770 1 to 600   tiling clone,   600/600
(100 %)
5 diff
(99.2 %id)
DA509998 brain .l 177 to 732 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DA302387 hippocampus .l 182 to 742 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA302437 hippocampus .l 182 to 743 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA798197 brain .l 182 to 739 2 to 562   capped   561/561
(100 %)
4 diff
(99.3 %id)
DA811599 brain .l 182 to 499 2 to 319   capped   318/318
(100 %)
0 diff
(100 %id)
DB136165 thymus .l 182 to 728 2 to 548   capped   547/547
(100 %)
2 diff
(99.7 %id)
DA218211 brain .l 191 to 728 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BM480034 embryonal carcinoma, cell line, testis .l 407 to 1445 1 to 1050       1050/1052
(99 %)
26 diff
(97.6 %id)
BG576053 breast, mammary adenocarcinoma, cell line .l 490 to 1360 1 to 884       884/890
(99 %)
29 diff
(96.8 %id)
BE348350 carcinoid, lung .l 735 to 1307 1 to 573   tiling clone, Submitted on the opposite strand 573/573
(100 %)
0 diff
(100 %id)
BF591712 carcinoid, lung .l 735 to 1218 1 to 484     Submitted on the opposite strand 484/484
(100 %)
1 diff
(99.8 %id)
BF224354 carcinoid, lung .l 735 to 1230 1 to 496     Submitted on the opposite strand 496/496
(100 %)
0 diff
(100 %id)
AA024943 heart .l 774 to 1181 1 to 410   fully sequenced,   410/410
(100 %)
2 diff
(99.6 %id)
DB316279 brain .l 937 to 1467 532 to 1       532/532
(100 %)
2 diff
(99.7 %id)
AA024860 heart .l 1151 to 1472 325 to 1   tiling clone, fully sequenced,   325/325
(100 %)
1 diff
(99.7 %id)
CF551868 Pooled muscle (cardiac and skeletal) .l 1398 to 2287 1 to 889   tiling clone,   889/904
(98 %)
11 diff
(98.8 %id)
AK123829   .l 1670 to 5212 1 to 3543 exact tiling clone, available from FLJ,   3543/3543
(100 %)
7 diff
(99.9 %id)
DA720980   .l 1671 to 2239 2 to 571   capped   570/570
(100 %)
4 diff
(99.3 %id)
AL047165 uterus .l 3261 to 3685 12 to 436   tiling clone,   425/426
(99 %)
0 diff
(100 %id)
AL079924 uterus .l 3261 to 3685 12 to 436       425/426
(99 %)
0 diff
(100 %id)
DB324258   .l 4654 to 5212 559 to 1       559/559
(100 %)
1 diff
(99.9 %id)
BQ422874 embryonal carcinoma, cell line, testis .m 1 to 761 2 to 772   available from MGC,   772/902
(85 %)
17 diff
(98.2 %id)
BC043403 Testis, embryonal carcinoma .m 1 to 2462 3 to 2464 exact tiling clone, available from MGC, AAA   2464/2464
(100 %)
3 diff
(99.9 %id)
BF170295 blood .m 93 to 412 1 to 324   tiling clone,   324/324
(100 %)
15 diff
(95.4 %id)
DA492107 brain .m 281 to 856 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
BP428513   .m 455 to 798 1 to 344       344/344
(100 %)
3 diff
(99.2 %id)
DA832957 placenta .m 519 to 1303 2 to 791   capped   788/795
(99 %)
8 diff
(99.0 %id)
CV029763 mixed .m 774 to 1117 1 to 344       344/519
(66 %)
3 diff
(99.5 %id)
CD557171 testis .m 793 to 1533 1 to 746       746/855
(87 %)
8 diff
(99.1 %id)
CU453184 epidermis .m 1120 to 1441 327 to 6     Submitted on the opposite strand 322/356
(90 %)
2 diff
(99.5 %id)
CN347358 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 1224 to 1851 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
AW360947 colon .m 1276 to 1513 1 to 238       238/240
(99 %)
6 diff
(97.5 %id)
AW360969 colon .m 1278 to 1513 1 to 237       237/239
(99 %)
7 diff
(97.1 %id)
AW360959 colon .m 1279 to 1513 1 to 231       233/234
(99 %)
15 diff
(93.6 %id)
BF816833 colon_ins .m 1283 to 1795 526 to 17     Submitted on the opposite strand 510/545
(93 %)
4 diff
(99.3 %id)
FN061159 breast carcinoma .m 1287 to 1397 1 to 111       111/111
(100 %)
0 diff
(100 %id)
CV376703 amnion_normal .m 1377 to 1677 25 to 328       304/328
(92 %)
13 diff
(96.1 %id)
AW753084 colon .m 1378 to 1513 1 to 135       135/137
(98 %)
8 diff
(94.2 %id)
CK821805 Pancreas, Purified pancreatic islet .m 1385 to 1980 1 to 596     Submitted on the opposite strand 596/596
(100 %)
2 diff
(99.7 %id)
BM312071 Pancreas, Purified pancreatic islet .m 1446 to 1840 1 to 395       395/395
(100 %)
0 diff
(100 %id)
AA251046.
matches multiple genes
germinal center B cell .m 1463 to 1834 1 to 373     also hits gene rororo 373/373
(100 %)
1 diff
(99.8 %id)
FN165390 breast carcinoma .m 1567 to 1649 82 to 1     Submitted on the opposite strand 82/82
(100 %)
1 diff
(98.8 %id)
FN096570 breast carcinoma .m 1615 to 1699 85 to 1     Submitted on the opposite strand 85/97
(87 %)
0 diff
(100 %id)
FN084155 breast carcinoma .m 1709 to 1828 1 to 116       116/116
(100 %)
4 diff
(96.6 %id)
DB379431 placenta .m 1873 to 2470 591 to 1       591/592
(99 %)
23 diff
(96.2 %id)
DA131984 alzheimer cortex .n 1 to 554 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA132039 alzheimer cortex .n 1 to 558 2 to 559   tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
AI022062 liver and spleen .n 331 to 863 534 to 1   tiling clone,   534/536
(99 %)
2 diff
(99.7 %id)
AA826824 invasive tumor (cell line), Prostate .n 388 to 861 473 to 1       473/473
(100 %)
2 diff
(99.6 %id)
BU164331 embryonal carcinoma, cell line, testis .o-u 1 to 881 30 to 909   tiling clone,   880/909
(96 %)
6 diff
(99.4 %id)
AL699139 human skeletal muscle .o-u 240 to 817 1 to 578       578/578
(100 %)
0 diff
(100 %id)
AW300455 Kidney .o-u 249 to 757 509 to 1       509/509
(100 %)
0 diff
(100 %id)
CV354398 breast_normal .o-u 368 to 485 121 to 3     Submitted on the opposite strand 119/121
(98 %)
0 diff
(100 %id)
BG956810 colon .o-u 562 to 1130 1 to 569   tiling clone,   569/569
(100 %)
3 diff
(99.5 %id)
BG112540 Bone, osteosarcoma, cell line .o-u 908 to 1662 1 to 757       757/1004
(75 %)
27 diff
(97.4 %id)
BU929270 placenta .o-u 1033 to 1814 1 to 782   tiling clone,   782/787
(99 %)
7 diff
(99.2 %id)
BG496797 lung, mucoepidermoid carcinoma .o-u 1281 to 2075 1 to 800   tiling clone,   800/829
(96 %)
30 diff
(96.4 %id)
TI_149300029   .o-u 1569 to 2516 1045 to 103   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 943/967
(97 %)
19 diff
(98.1 %id)
BM976192 lung, Primary Lung Cystic Fibrosis EpithelialCells .o-u 1819 to 2516 717 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 699/699
(100 %)
1 diff
(99.9 %id)
CD511758 Pooled-Skin .o-u 2207 to 2884 1 to 683   tiling clone,   683/800
(85 %)
9 diff
(98.9 %id)
AA363846 pineal body .o-u 2254 to 2508 1 to 255       255/259
(98 %)
5 diff
(98.1 %id)
BX099208   .o-u 2841 to 3331 1 to 491   tiling clone,   491/491
(100 %)
1 diff
(99.8 %id)
AI208700   .o-u 3207 to 3343 140 to 4   tiling clone,   137/140
(97 %)
0 diff
(100 %id)
DB442893 testis .p 1 to 454 1 to 454       454/454
(100 %)
2 diff
(99.6 %id)
BC030778 testis .p 1 to 3149 6 to 3154 P4H tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 3149/3149
(100 %)
12 diff
(99.7 %id)
BG722309 testis .p 1 to 720 6 to 730 P4H available from MGC,   725/731
(99 %)
17 diff
(97.7 %id)
BC034974 testis .p 1 to 3149 6 to 3154   available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 3149/3149
(100 %)
12 diff
(99.7 %id)
BG722388 testis .p 1 to 723 6 to 741 P4H V52G I53D K54Q A55R ... available from MGC,   715/741
(96 %)
50 diff
(93.3 %id)
DA253046 caudate nucleus .p 1371 to 1957 2 to 588   tiling clone, capped   587/587
(100 %)
2 diff
(99.7 %id)
AA203342 liver and spleen .p 2333 to 2948 1 to 599   tiling clone,   599/858
(69 %)
26 diff
(97.0 %id)
DB306433 caudate nucleus .p 2628 to 3168 543 to 1       543/543
(100 %)
5 diff
(99.1 %id)
AI033356 liver and spleen .p 2693 to 3164 470 to 1   tiling clone,   470/470
(100 %)
4 diff
(99.2 %id)
DB507827 testis .p 2722 to 3149 1 to 428     Submitted on the opposite strand 428/428
(100 %)
2 diff
(99.6 %id)
DA251571 caudate nucleus .q 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
CD697674 normal nasopharynx .q 19 to 553 22 to 555 I11Y L12*     534/555
(96 %)
12 diff
(97.9 %id)
AW811978 stomach .r-u 1 to 330 330 to 1   tiling clone,   330/330
(100 %)
8 diff
(97.6 %id)
AW811988 stomach .r-u 1 to 330 330 to 1       330/330
(100 %)
8 diff
(97.6 %id)
AW811976 stomach .r-u 18 to 401 1 to 384   tiling clone,   384/384
(100 %)
7 diff
(98.2 %id)
AW811986 stomach .r-u 18 to 401 1 to 384       384/384
(100 %)
7 diff
(98.2 %id)
AW243303 Kidney .r-u 25 to 345 1 to 321   tiling clone, Submitted on the opposite strand 321/321
(100 %)
0 diff
(100 %id)
CD723378 eye, lacrimal gland .r-u 251 to 871 1 to 621   tiling clone,   621/621
(100 %)
0 diff
(100 %id)
CB129028 Liver .r-u 258 to 853 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
AA397837   .r-u 476 to 783 1 to 309       309/309
(100 %)
6 diff
(98.1 %id)
CB962101 Blood vessels - aorta, basilar and artery .r-u 568 to 1222 1 to 663   tiling clone,   663/768
(86 %)
16 diff
(98.0 %id)
W32494 heart .r-u 760 to 1113 1 to 358       358/469
(76 %)
5 diff
(99.0 %id)
BG537088 lung .r-u 1006 to 1583 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
TI_149308733   .r-u 1041 to 1898 970 to 121   AAA   850/952
(89 %)
18 diff
(98.2 %id)
BG186639   .r-u 1044 to 1409 1 to 366   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 366/366
(100 %)
4 diff
(99.0 %id)
BG209451   .r-u 1045 to 1416 1 to 374   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 374/374
(100 %)
9 diff
(97.6 %id)
BX386479 Placenta Cot 25-normalized .r-u 1050 to 1855 810 to 1       810/810
(100 %)
0 diff
(100 %id)
BX452715 adult brain, brain .r-u 1050 to 1885 1 to 834       834/859
(97 %)
29 diff
(96.7 %id)
BX452716 adult brain, brain .r-u 1050 to 1861 1 to 813       813/865
(93 %)
27 diff
(96.9 %id)
TI_149291252   .r-u 1099 to 1901 874 to 88   AAA   787/909
(86 %)
11 diff
(98.8 %id)
BM973895 lung .r-u 1099 to 1901 805 to 19   AAA   787/819
(96 %)
11 diff
(98.7 %id)
AA340508 Kidney .r-u 1101 to 1403 1 to 303     Submitted on the opposite strand 303/303
(100 %)
0 diff
(100 %id)
AW964797   .r-u 1102 to 1699 1 to 597       597/599
(99 %)
9 diff
(98.5 %id)
BP422245 small intestine .r-u 1160 to 1667 1 to 508     Submitted on the opposite strand 508/508
(100 %)
2 diff
(99.7 %id)
BP419799 small intestine .r-u 1165 to 1660 1 to 496     Submitted on the opposite strand 496/496
(100 %)
0 diff
(100 %id)
BE564783 bladder, carcinoma, cell line .r-u 1175 to 1856 1 to 669       669/749
(89 %)
35 diff
(95.4 %id)
CD370380 Alveolar Macrophage, lung .r-u 1196 to 1901 723 to 19   AAA   705/705
(100 %)
2 diff
(99.8 %id)
BU625951 cell lines, Enchondroma .r-u 1215 to 1901 703 to 19   AAA   685/685
(100 %)
9 diff
(98.7 %id)
AW753371 colon .r-u 1216 to 1727 1 to 512       512/512
(100 %)
5 diff
(99.1 %id)
TI_149277690   .r-u 1222 to 1898 758 to 91   AAA   668/668
(100 %)
14 diff
(98.0 %id)
DR978723 placenta .r-u 1232 to 1407 1 to 173   AAA Submitted on the opposite strand 173/173
(100 %)
5 diff
(97.2 %id)
BU687194 lung .r-u 1234 to 1898 683 to 19   AAA   665/665
(100 %)
2 diff
(99.7 %id)
GD154584   .r-u 1239 to 1410 7 to 178       172/185
(92 %)
1 diff
(99.5 %id)
AL533097 adult brain, brain .r-u 1257 to 1872 628 to 9       620/834
(74 %)
0 diff
(100 %id)
TI_149304897   .r-u 1261 to 1901 728 to 89   AAA   640/906
(70 %)
2 diff
(99.8 %id)
BM978409 lung, Primary Lung Epithelial Cells .r-u 1261 to 1901 658 to 19   AAA   640/648
(98 %)
2 diff
(99.7 %id)
CD369140 Alveolar Macrophage, lung .r-u 1288 to 1906 637 to 19   tiling clone, AAA   619/619
(100 %)
0 diff
(100 %id)
BI466974 Pancreas, Purified pancreatic islet .r-u 1290 to 1854 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
BE703923 nervous_normal .s 1 to 416 1 to 416   tiling clone,   416/420
(99 %)
10 diff
(97.7 %id)
BG287725 bladder, transitional cell papilloma, cell line .s 356 to 1146 1 to 791   tiling clone,   791/968
(81 %)
25 diff
(97.5 %id)
BM560047 brain, medulla .t 1 to 695 79 to 785 G6V C8L P9S A10R K11E ... tiling clone,   707/1208
(58 %)
44 diff
(96.4 %id)
DB448731 testis .u 1 to 441 1 to 441 exact tiling clone,   441/441
(100 %)
1 diff
(99.8 %id)
AK055801 Kidney .va 1 to 2118 2 to 2119 exact tiling clone, available from FLJ,   2119/2119
(100 %)
4 diff
(99.9 %id)
DA624953 Kidney .va 1 to 557 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DN996003 breast cancer, Mammary gland (cancer tissue) .va 60 to 607 1 to 547       547/547
(100 %)
4 diff
(99.3 %id)
BG913818 anaplastic oligodendroglioma with 1p/19qloss, brain .va 785 to 1558 13 to 800       788/802
(98 %)
24 diff
(97.1 %id)
DB166178 thyroid gland .va 1349 to 2156 2 to 813   capped   812/817
(99 %)
15 diff
(98.2 %id)
TI_149274742   .va 1429 to 2116 788 to 101   AAA   688/1012
(67 %)
0 diff
(100 %id)
BM968590 lung, Primary Lung Epithelial Cells .va 1467 to 2116 670 to 21   AAA   650/652
(99 %)
0 diff
(100 %id)
DB320581 Kidney .va 1567 to 2118 552 to 1       552/552
(100 %)
3 diff
(99.5 %id)
CK429778 eye, lacrimal gland .va 1641 to 2262 1 to 622   tiling clone,   622/622
(100 %)
0 diff
(100 %id)
CN270675 embryonic stem cells, DMSO-treated H9 cellline .va 1708 to 2480 1 to 772   tiling clone,   772/772
(100 %)
4 diff
(99.5 %id)
BF084791 denis_drash .va 2197 to 2530 6 to 337   tiling clone,   332/338
(98 %)
20 diff
(94.1 %id)
CK004624 brain/CNS, Human Brain - Frontal Cortex .va 2427 to 3044 1 to 618   tiling clone,   618/618
(100 %)
1 diff
(99.9 %id)
AA262132 germinal center B cell .va 2446 to 2857 2 to 413       412/413
(99 %)
6 diff
(98.6 %id)
BX358822 Placenta Cot 25-normalized .va 2450 to 3336 888 to 1       888/987
(89 %)
16 diff
(98.4 %id)
BX392759 Placenta Cot 25-normalized .va 2456 to 3372 913 to 2   tiling clone,   912/919
(99 %)
4 diff
(99.6 %id)
AA150779 uterus .va 2497 to 2693 1 to 198       198/198
(100 %)
3 diff
(98.5 %id)
AA625596 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .va 2500 to 2890 396 to 6       391/396
(98 %)
0 diff
(100 %id)
CB958201 Pooled-Glandular .va 2502 to 3122 1 to 626       626/886
(70 %)
16 diff
(98.2 %id)
DB382135 thyroid gland .va 2833 to 3377 546 to 1       546/555
(98 %)
7 diff
(98.8 %id)
AA150721 uterus .va 2961 to 3381 424 to 1   tiling clone,   424/425
(99 %)
9 diff
(97.9 %id)
DB045120 testis .vb 1 to 568 2 to 569   tiling clone, capped   568/568
(100 %)
3 diff
(99.5 %id)
AK096440 tongue .vb 117 to 2352 1 to 2236 exact tiling clone, available from FLJ,   2236/2236
(100 %)
5 diff
(99.8 %id)
DA765754 tongue .vb 118 to 693 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
AV658528 corresponding non cancerous liver tissue .vb 1310 to 1707 21 to 418   tiling clone, Submitted on the opposite strand 398/418
(95 %)
6 diff
(98.6 %id)
DB253642 uterus .vb 1439 to 1970 2 to 534   capped   533/533
(100 %)
4 diff
(99.3 %id)
DB325467 tongue .vb 1779 to 2352 578 to 1       578/578
(100 %)
5 diff
(99.2 %id)
DB151727 thymus .vc 1 to 577 2 to 578 exact tiling clone, capped   577/577
(100 %)
1 diff
(99.9 %id)
AI610854 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .vc 439 to 790 355 to 4   tiling clone,   352/355
(99 %)
0 diff
(100 %id)
DA718390   .vd 1 to 580 2 to 587 M3V tiling clone, capped   586/586
(100 %)
9 diff
(98.5 %id)
DB274552 uterus .ve 1 to 550 2 to 552 M3V R14X S15K C16L A19R ... tiling clone, capped   551/551
(100 %)
4 diff
(99.3 %id)
DA223620 brain .vf 1 to 550 2 to 551   tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
DB477280 hippocampus .vg 1 to 494 1 to 494 exact tiling clone,   494/494
(100 %)
1 diff
(99.8 %id)
AA305571 colon Gene SH3YL1, variant not shown              
DB310241 substantia nigra Gene SH3YL1, variant not shown         This clone was ignored    
DA346213 substantia nigra Gene SH3YL1, variant not shown       capped This clone was ignored    
DB312431 thalamus Gene SH3YL1, variant not shown         This clone was ignored    
DA407450 thalamus Gene SH3YL1, variant not shown       capped This clone was ignored    
BP211235 cerebellum Gene SH3YL1, variant not shown         This clone was ignored    
CN285831 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene SH3YL1, variant not shown              
CN386254 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 Gene SH3YL1, variant not shown         Suspected internal deletion, this clone was ignored    
CR603113 Placenta Cot 25-normalized Gene SH3YL1, variant not shown         This clone was ignored    
CR739387 colon, colon tumor RER+ Gene SH3YL1, variant not shown         Suspected internal deletion, this clone was ignored    
BX487344   Gene SH3YL1, variant not shown              
DB317337 brain Gene SH3YL1, variant not shown         This clone was ignored    
DA523522 brain Gene SH3YL1, variant not shown       capped This clone was ignored    
AA282184 germinal center B cell Gene SH3YL1, variant not shown              
AA282318 germinal center B cell Gene SH3YL1, variant not shown              
AW022713 cochlea, ear Gene SH3YL1, variant not shown       AAA      
BF507367   Gene SH3YL1, variant not shown       AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base)    
BF528918 anaplastic oligodendroglioma with 1p/19qloss, brain Gene SH3YL1, variant not shown              
BG432674 Kidney Gene SH3YL1, variant not shown         Suspected internal deletion, this clone was ignored    
BQ270670 insulinoma, Pancreas Gene SH3YL1, variant not shown       AAA This clone was ignored    
BQ270917 insulinoma, Pancreas Gene SH3YL1, variant not shown         This clone was ignored    
CD722097 eye, lacrimal gland Gene SH3YL1, variant not shown         Suspected internal deletion, this clone was ignored    
DB374903 placenta Gene SH3YL1, variant not shown         Suspected internal deletion, this clone was ignored    
DA829942 placenta Gene SH3YL1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA958858 Spleen Gene SH3YL1, variant not shown       capped      
DB334127 Spleen Gene SH3YL1, variant not shown              
DB286538 uterus Gene SH3YL1, variant not shown       capped      
DB352809 uterus Gene SH3YL1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p, .q, .r-u, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI