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Gene SGSHTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
316 supporting clones for gene SGSH back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA291484 hippocampus .a 1 to 480 2 to 484   tiling clone, capped   483/483
(100 %)
3 diff
(99.4 %id)
DA312540 hippocampus .a 108 to 633 2 to 527   tiling clone, capped   526/526
(100 %)
1 diff
(99.9 %id)
DA183721 amygdala .a 109 to 560 2 to 454   capped   453/453
(100 %)
1 diff
(99.8 %id)
DA151224 amygdala .a 110 to 368 2 to 260   capped   259/259
(100 %)
1 diff
(99.7 %id)
DC319407 brain .a 631 to 1196 1 to 567   tiling clone,   567/567
(100 %)
1 diff
(99.9 %id)
NM_000199.3   .a 631 to 3400 1 to 2770   RefSeq,   2770/2770
(100 %)
2 diff
(100.0 %id)
BI553406 brain, hippocampus .a 633 to 741 114 to 6     Submitted on the opposite strand 109/115
(94 %)
0 diff
(100 %id)
DC364202   .a 651 to 1122 1 to 472       472/472
(100 %)
5 diff
(99.0 %id)
AL110346 brain .a 657 to 1172 1 to 516       516/516
(100 %)
4 diff
(99.3 %id)
AL110347 brain .a 657 to 1116 1 to 461       461/461
(100 %)
3 diff
(99.4 %id)
CA454226   .a 658 to 1533 1 to 884       884/886
(99 %)
10 diff
(98.9 %id)
DC323044 brain .a 659 to 1222 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC419884 uterus .a 659 to 1154 1 to 496       496/496
(100 %)
0 diff
(100 %id)
DC358683 lung .a 664 to 1222 1 to 561       561/562
(99 %)
5 diff
(99.2 %id)
DC377355 brain .a 666 to 1207 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DC407397 thymus .a 666 to 1216 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC422534 uterus .a 666 to 1231 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC333285 hippocampus .a 670 to 1224 1 to 556       556/559
(99 %)
3 diff
(99.5 %id)
DC298526 adrenal gland .a 671 to 1209 1 to 540       540/540
(100 %)
2 diff
(99.7 %id)
DC346990 tongue, tumor tissue .a 671 to 1195 1 to 526       526/526
(100 %)
2 diff
(99.7 %id)
DC355825   .a 671 to 1253 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC375476 brain .a 671 to 1241 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC381262 placenta .a 671 to 1184 1 to 518       518/529
(97 %)
5 diff
(99.1 %id)
DC411374 kidney, tumor tissue .a 671 to 1147 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
DC416188 trachea .a 671 to 1223 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC346254 tongue, tumor tissue .a 673 to 1241 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC404331 testis .a 675 to 1224 1 to 550       550/555
(99 %)
2 diff
(99.7 %id)
DC384292   .a 679 to 1239 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DC385367 rectum .a 679 to 1231 1 to 553       553/553
(100 %)
0 diff
(100 %id)
DC390433 Spleen .a 679 to 1252 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
DC382001 placenta .a 680 to 1247 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC387881 small intestine .a 680 to 1255 1 to 576       576/576
(100 %)
0 diff
(100 %id)
CA391736 eye, RPE/choroid .a 682 to 1252 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
BM706053 eye, lens .a 685 to 1224 1 to 540       540/543
(99 %)
2 diff
(99.7 %id)
DC374762 brain .a 687 to 1271 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
BM818396 stomach .a 687 to 1300 1 to 614       614/614
(100 %)
0 diff
(100 %id)
DC334485 hippocampus .a 692 to 1232 1 to 541       541/541
(100 %)
0 diff
(100 %id)
DC361445 Kidney .a 692 to 1279 1 to 593       593/593
(100 %)
6 diff
(99.0 %id)
DC347284 tongue, tumor tissue .a 693 to 1259 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC382150 placenta .a 693 to 1232 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC394583 testis .a 693 to 1241 1 to 549       549/549
(100 %)
0 diff
(100 %id)
DC415077 trachea .a 693 to 1154 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
DC393242 breast, tumor tissue .a 694 to 1239 1 to 546       546/546
(100 %)
4 diff
(99.3 %id)
DC382263 placenta .a 695 to 1214 1 to 521       521/521
(100 %)
2 diff
(99.7 %id)
DC328800 corpus callosum .a 697 to 1250 1 to 555       555/555
(100 %)
2 diff
(99.7 %id)
DC342734 thalamus .a 697 to 1232 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DC297053   .a 697 to 1232 1 to 536       536/536
(100 %)
0 diff
(100 %id)
DC363203   .a 697 to 1237 1 to 541       541/541
(100 %)
1 diff
(99.9 %id)
DC363442   .a 697 to 1242 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC401566 testis .a 697 to 1188 36 to 527       492/527
(93 %)
6 diff
(98.9 %id)
DC414113 trachea .a 697 to 1307 1 to 611       611/611
(100 %)
0 diff
(100 %id)
DC297652   .a 698 to 1262 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC298200 adrenal gland .a 698 to 1279 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
DC298285 adrenal gland .a 698 to 1264 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC298315 adrenal gland .a 698 to 1252 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC298341 adrenal gland .a 698 to 1248 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
DC298591 adrenal gland .a 698 to 1184 1 to 487       487/487
(100 %)
0 diff
(100 %id)
AK222890 Kidney .a 698 to 2242 1 to 1545 F270L R456H     1545/1545
(100 %)
2 diff
(99.9 %id)
AK291257   .a 698 to 2458 1 to 1761       1761/1761
(100 %)
0 diff
(100 %id)
DC299606   .a 698 to 1265 1 to 569       569/569
(100 %)
2 diff
(99.7 %id)
DC300787 bladder .a 698 to 1208 1 to 511       511/511
(100 %)
0 diff
(100 %id)
DC301107 bladder .a 698 to 1263 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC323161 brain .a 698 to 1263 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DC326853 caudate nucleus .a 698 to 1224 1 to 527       527/536
(98 %)
1 diff
(99.9 %id)
DC332880 hippocampus .a 698 to 1229 1 to 532       532/532
(100 %)
0 diff
(100 %id)
DC335729 hippocampus .a 698 to 1247 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC337101 substantia nigra .a 698 to 1241 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
DC345119 colon .a 698 to 1232 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
DC345715 tongue, tumor tissue .a 698 to 1305 1 to 608       608/608
(100 %)
1 diff
(99.9 %id)
DC347176 tongue, tumor tissue .a 698 to 1281 1 to 584       584/584
(100 %)
1 diff
(99.9 %id)
DC347644 tongue, tumor tissue .a 698 to 1232 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
DC296864   .a 698 to 1257 1 to 560       560/560
(100 %)
0 diff
(100 %id)
AU099199   .a 698 to 997 1 to 300       300/300
(100 %)
0 diff
(100 %id)
BP252646 Kidney .a 698 to 1279 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CB961545 placenta, pre-eclamptic placenta .a 698 to 1440 28 to 775       748/775
(96 %)
11 diff
(98.6 %id)
CB988539 Human Placenta, placenta .a 698 to 1354 28 to 685       658/795
(82 %)
13 diff
(98.4 %id)
DC362369 Kidney .a 698 to 1255 1 to 558       558/558
(100 %)
0 diff
(100 %id)
BP288100 lung .a 698 to 1279 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DC363197   .a 698 to 1232 1 to 535       535/535
(100 %)
0 diff
(100 %id)
DC363349   .a 698 to 1252 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC363845   .a 698 to 1243 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DC363942   .a 698 to 1262 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC366990   .a 698 to 1208 1 to 513       513/513
(100 %)
2 diff
(99.7 %id)
DC369810   .a 698 to 1254 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC370670   .a 698 to 1214 1 to 517       517/517
(100 %)
1 diff
(99.9 %id)
DC372435   .a 698 to 1256 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC375031 brain .a 698 to 1263 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC375173 brain .a 698 to 1274 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
BP313845 mammary gland .a 698 to 1280 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DC383038 Prostate .a 698 to 1247 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
DC383747 Prostate .a 698 to 1255 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DC384397   .a 698 to 1244 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC385116   .a 698 to 1274 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC389031 Spleen .a 698 to 1262 1 to 565       565/565
(100 %)
0 diff
(100 %id)
DC389187 Spleen .a 698 to 1278 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DC389252 Spleen .a 698 to 1262 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC389498 Spleen .a 698 to 1274 1 to 578       578/578
(100 %)
1 diff
(99.9 %id)
DC390254 Spleen .a 698 to 1268 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DC391213 Spleen .a 698 to 1256 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
DC391761 Spleen .a 698 to 1252 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC392342 stomach .a 698 to 1271 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DC425463   .a 698 to 1231 1 to 536       536/536
(100 %)
3 diff
(99.5 %id)
DC392833 breast, tumor tissue .a 698 to 1232 1 to 535       535/535
(100 %)
0 diff
(100 %id)
DC392861 breast, tumor tissue .a 698 to 1232 1 to 535       535/535
(100 %)
0 diff
(100 %id)
DC392890 breast, tumor tissue .a 698 to 1248 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC392893 breast, tumor tissue .a 698 to 1232 1 to 535       535/535
(100 %)
0 diff
(100 %id)
BP364345 lung .a 698 to 1279 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP364384 lung .a 698 to 1280 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
DC413875 trachea .a 698 to 1210 1 to 513       513/513
(100 %)
0 diff
(100 %id)
DC417492 trachea .a 698 to 1294 1 to 597       597/597
(100 %)
0 diff
(100 %id)
DC422832 uterus .a 698 to 1244 1 to 548       548/548
(100 %)
1 diff
(99.9 %id)
DC423968 uterus .a 698 to 1278 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC423984 uterus .a 698 to 1286 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC300290   .a 699 to 1257 1 to 559       559/559
(100 %)
0 diff
(100 %id)
DC346415 tongue, tumor tissue .a 699 to 1276 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP288286 lung .a 699 to 1269 1 to 576       576/581
(99 %)
10 diff
(98.3 %id)
DC383726 Prostate .a 699 to 1266 1 to 568       568/568
(100 %)
0 diff
(100 %id)
AU141417 thyroid gland .a 699 to 1461 2 to 763   capped   762/762
(100 %)
7 diff
(99.1 %id)
DC420659 uterus .a 699 to 1245 1 to 546       546/546
(100 %)
2 diff
(99.7 %id)
DC421508 uterus .a 699 to 1296 1 to 597       597/597
(100 %)
2 diff
(99.7 %id)
DC338327 subthalamic nucleus .a 700 to 1252 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
DC361700 Kidney .a 701 to 1282 1 to 590       590/590
(100 %)
10 diff
(98.4 %id)
DN997351 breast cancer, Mammary gland (cancer tissue) .a 704 to 1449 1 to 744       744/744
(100 %)
7 diff
(99.1 %id)
BI833411 pooled pancreas and spleen .a 705 to 1474 1 to 774       774/775
(99 %)
10 diff
(98.8 %id)
TI_57166488   .a 705 to 1474 27 to 800       774/801
(96 %)
14 diff
(98.3 %id)
BC047318 Pancreas, Spleen, adult pooled .a 706 to 3387 1 to 2682   available from MGC, AAA   2682/2682
(100 %)
7 diff
(99.8 %id)
BI834317 pooled pancreas and spleen .a 708 to 1369 1 to 670       670/1116
(60 %)
26 diff
(97.7 %id)
TI_57163862   .a 708 to 1369 67 to 736       670/1182
(56 %)
30 diff
(97.5 %id)
CA454851   .a 709 to 1583 1 to 887       887/914
(97 %)
17 diff
(98.2 %id)
DB118519 thymus .a 709 to 1202 9 to 502   capped   494/501
(98 %)
7 diff
(98.7 %id)
BE407768 choriocarcinoma, placenta .a 712 to 1223 1 to 512   available from MGC,   512/512
(100 %)
3 diff
(99.5 %id)
BU553673 ovary, teratocarcinoma, cell line .a 713 to 1615 1 to 908       908/912
(99 %)
14 diff
(98.5 %id)
BU071989 Pancreas, Purified pancreatic islet .a 714 to 1380 4 to 670       667/670
(99 %)
5 diff
(99.3 %id)
U30894   .a 715 to 3363 10 to 2657   tiling clone,   2648/2657
(99 %)
9 diff
(99.7 %id)
BX387226 Placenta Cot 25-normalized .a 716 to 1595 1 to 871       871/884
(98 %)
16 diff
(98.2 %id)
BX387227 Placenta Cot 25-normalized .a 716 to 1509 1 to 790       790/790
(100 %)
12 diff
(98.5 %id)
TI_1948212734   .a 717 to 1823 135 to 1233       1099/1233
(89 %)
37 diff
(97.0 %id)
TI_1948213013   .a 717 to 1316 124 to 723       600/1472
(40 %)
14 diff
(99.1 %id)
TI_1948213014   .a 717 to 1663 132 to 1076       945/1212
(77 %)
20 diff
(98.4 %id)
TI_1948213582   .a 717 to 1673 132 to 1095       964/1255
(76 %)
29 diff
(97.7 %id)
EL734501 mixed .a 718 to 1381 1 to 664       664/664
(100 %)
2 diff
(99.7 %id)
BI912648 leukocyte .a 722 to 1280 29 to 587       559/590
(94 %)
7 diff
(98.9 %id)
TI_57247405   .a 722 to 1280 29 to 587       559/590
(94 %)
7 diff
(98.9 %id)
BI521065 pooled pancreas and spleen .a 723 to 1496 1 to 775       775/775
(100 %)
5 diff
(99.4 %id)
BE888551 leiomyosarcoma, uterus .a 764 to 1401 1 to 636       636/643
(98 %)
4 diff
(99.4 %id)
CV351572 prostate_normal .a 773 to 1223 485 to 34     Submitted on the opposite strand 452/686
(65 %)
6 diff
(99.2 %id)
DA654486   .a 880 to 1446 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA626282 Kidney .a 897 to 1442 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
EC510049 Prostate .a 922 to 1014 1 to 94       94/94
(100 %)
3 diff
(96.9 %id)
EC552611 Prostate .a 923 to 1014 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC567153 Prostate .a 923 to 1014 1 to 92       92/92
(100 %)
0 diff
(100 %id)
BQ329562 lung_normal .a 967 to 1302 342 to 1       342/342
(100 %)
16 diff
(95.4 %id)
BP266251 thyroid .a 1007 to 1587 1 to 580       580/581
(99 %)
3 diff
(99.5 %id)
DB036411 testis .a 1010 to 1582 2 to 575   capped   574/575
(99 %)
2 diff
(99.7 %id)
CN271996 embryonic stem cells, cell lines H1, H7, andH9 .a 1080 to 1552 1 to 473       473/473
(100 %)
0 diff
(100 %id)
BU540914 epithelioid carcinoma cell line, Pancreas .a 1097 to 1994 16 to 922       907/922
(98 %)
19 diff
(98.0 %id)
DA387668 thalamus .a 1123 to 1665 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB204061 trachea .a 1127 to 1642 2 to 517   capped   516/516
(100 %)
0 diff
(100 %id)
BG829585 epithelioid carcinoma cell line, Pancreas .a 1145 to 1925 1 to 780       780/781
(99 %)
11 diff
(98.6 %id)
BI046218 prostate_normal .a 1214 to 1527 312 to 1       312/312
(100 %)
5 diff
(98.4 %id)
DA973421 synovial membrane tissue from rheumatioidarthritis .a 1347 to 1868 2 to 524   capped   523/527
(99 %)
2 diff
(99.7 %id)
TI_1948213016   .a 1457 to 2229 904 to 122       783/1297
(60 %)
21 diff
(98.4 %id)
BX327964 Placenta Cot 25-normalized .a 1461 to 2376 1 to 934       934/954
(97 %)
109 diff
(88.6 %id)
BM048206 carcinoma, cell line, Prostate .a 1473 to 2430 1 to 939       939/991
(94 %)
46 diff
(95.4 %id)
BM049000 carcinoma, cell line, Prostate .a 1473 to 1821 1 to 354       354/1212
(29 %)
12 diff
(99.1 %id)
BU541176 carcinoma, cell line, Prostate .a 1475 to 2273 1 to 808       808/938
(86 %)
17 diff
(98.2 %id)
TI_1948213584   .a 1496 to 2229 856 to 121       736/1321
(55 %)
10 diff
(99.3 %id)
CD607805   .a 1542 to 2235 694 to 2       693/694
(99 %)
0 diff
(100 %id)
AW813267 stomach .a 1648 to 1747 9 to 107       99/107
(92 %)
6 diff
(94.4 %id)
BE146146 head_neck .a 1648 to 2235 605 to 20     Submitted on the opposite strand 586/617
(94 %)
0 diff
(100 %id)
BX371862 Placenta Cot 25-normalized .a 1651 to 2598 949 to 8       942/949
(99 %)
0 diff
(100 %id)
AW361484 colon .a 1660 to 2022 1 to 366       366/378
(96 %)
14 diff
(96.3 %id)
CD607803   .a 1677 to 2235 559 to 2       558/559
(99 %)
0 diff
(100 %id)
CR623882 Placenta Cot 25-normalized .a 1753 to 3358 1 to 1606       1606/1606
(100 %)
0 diff
(100 %id)
AL543497 placenta, Placenta Cot 25-normalized .a 1753 to 2420 1 to 651   fully sequenced,   651/651
(100 %)
0 diff
(100 %id)
AL543434 placenta, Placenta Cot 25-normalized .a 1753 to 2510 1 to 748   fully sequenced,   748/748
(100 %)
0 diff
(100 %id)
TI_57201052   .a 1784 to 2434 27 to 677       651/677
(96 %)
6 diff
(99.2 %id)
BM743401 stomach .a 1787 to 2372 1 to 586       586/586
(100 %)
4 diff
(99.4 %id)
BM746308 stomach .a 1787 to 2200 1 to 414       414/414
(100 %)
2 diff
(99.6 %id)
CB130352 Liver .a 1789 to 2206 1 to 418       418/418
(100 %)
2 diff
(99.6 %id)
BI823800 pooled brain, lung, testis .a 1792 to 2434 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
AW579563 head_neck .a 1807 to 2240 443 to 4       440/446
(98 %)
0 diff
(100 %id)
AA312469   .a 1819 to 2089 1 to 271       271/271
(100 %)
0 diff
(100 %id)
AW951040   .a 1820 to 2399 1 to 581       581/584
(99 %)
6 diff
(99.0 %id)
BP352067   .a 1835 to 2414 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DA871230 Prostate .a 1886 to 2404 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
BM050144 epithelioid carcinoma cell line, Pancreas .a 1890 to 2660 1 to 771       771/775
(99 %)
6 diff
(99.3 %id)
BF868366 lung_tumor .a 1893 to 2487 1 to 594       594/596
(99 %)
11 diff
(98.2 %id)
TI_57247410   .a 1909 to 2699 42 to 867       826/875
(94 %)
6 diff
(99.4 %id)
BQ227740 epithelioid carcinoma, Pancreas .a 1910 to 2809 1 to 902       902/902
(100 %)
7 diff
(99.3 %id)
BI912543 leukocyte .a 1945 to 2699 70 to 833       764/841
(90 %)
17 diff
(98.0 %id)
CA454674   .a 1948 to 2783 1 to 849       849/899
(94 %)
21 diff
(97.7 %id)
BU860325 adenocarcinoma, cell line, breast .a 1981 to 2850 1 to 888       888/911
(97 %)
21 diff
(97.7 %id)
BP314214 mammary gland .a 2008 to 2588 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
AW835755 leiomios .a 2038 to 2526 1 to 487       487/487
(100 %)
4 diff
(99.2 %id)
BG763445 melanotic melanoma, high MDR (cell line), skin .a 2141 to 3084 1 to 942       942/978
(96 %)
25 diff
(97.5 %id)
BF975708 B-cells, primary B-cells from tonsils (cell line) .a 2174 to 3081 1 to 914       914/958
(95 %)
41 diff
(95.8 %id)
BG684997 B-cells, primary B-cells from tonsils (cell line) .a 2174 to 2911 1 to 742       742/753
(98 %)
15 diff
(98.1 %id)
AA232728 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2191 to 2727 1 to 534       534/534
(100 %)
7 diff
(98.7 %id)
BM051277 eye, normal pigmented retinal epithelium .a 2228 to 3153 1 to 918       918/918
(100 %)
31 diff
(96.7 %id)
BI908995 leukocyte .a 2235 to 2889 1 to 658       658/658
(100 %)
7 diff
(99.0 %id)
TI_57237355   .a 2235 to 2889 35 to 692       658/692
(95 %)
6 diff
(99.2 %id)
BF525478 brain, glioblastoma with EGFR amplification .a 2255 to 2984 13 to 747       735/1136
(64 %)
23 diff
(98.0 %id)
ES312506 frontal balding hair, skin .a 2325 to 2526 1 to 201       201/201
(100 %)
5 diff
(97.6 %id)
BI092264 cervix .a 2340 to 3201 1 to 859       859/861
(99 %)
27 diff
(96.9 %id)
BQ931940 epidermoid carcinoma, cell line, lung .a 2358 to 3220 1 to 876       876/918
(95 %)
31 diff
(96.7 %id)
BU528593 epidermoid carcinoma, cell line, lung .a 2358 to 3254 1 to 905       905/905
(100 %)
24 diff
(97.4 %id)
BX339149 Placenta Cot 25-normalized .a 2362 to 3343 972 to 1       972/991
(98 %)
24 diff
(97.6 %id)
AL569977 placenta, Placenta Cot 25-normalized .a 2390 to 3352 945 to 1   fully sequenced,   945/945
(100 %)
21 diff
(97.8 %id)
CR998802 T-Lymphocytes .a 2451 to 3309 1 to 860       860/860
(100 %)
1 diff
(99.9 %id)
AW583769 Islets of Langerhans, Pancreas .a 2473 to 2862 1 to 390       390/390
(100 %)
1 diff
(99.8 %id)
AL569946 placenta, Placenta Cot 25-normalized .a 2480 to 3358 875 to 1   fully sequenced,   875/875
(100 %)
7 diff
(99.2 %id)
BG999984 head_normal .a 2487 to 3083 5 to 604       600/608
(98 %)
20 diff
(96.8 %id)
BQ707496 Spleen .a 2495 to 3250 1 to 762       762/925
(82 %)
23 diff
(97.6 %id)
TI_149301695   .a 2524 to 3396 944 to 88   AAA   857/946
(90 %)
17 diff
(98.3 %id)
BU956476 adenocarcinoma, cell line, breast .a 2538 to 3375 1 to 849       849/881
(96 %)
23 diff
(97.4 %id)
BU157086 melanotic melanoma, cell line, skin .a 2570 to 3372 1 to 810       810/859
(94 %)
15 diff
(98.3 %id)
BQ675842 epidermoid carcinoma, cell line, salivary gland .a 2570 to 3388 1 to 823   AAA   823/823
(100 %)
7 diff
(99.2 %id)
BU163689 epidermoid carcinoma, cell line, salivary gland .a 2570 to 3324 1 to 764       764/907
(84 %)
25 diff
(97.3 %id)
BQ669783 epidermoid carcinoma, cell line, salivary gland .a 2570 to 3388 1 to 818   AAA   818/818
(100 %)
10 diff
(98.8 %id)
TI_57237741   .a 2600 to 3317 66 to 789       724/792
(91 %)
31 diff
(96.1 %id)
BI909687 leukocyte .a 2605 to 3317 1 to 719       719/722
(99 %)
29 diff
(96.0 %id)
TI_151700424   .a 2621 to 3388 849 to 83   AAA   767/937
(81 %)
10 diff
(99.0 %id)
BM695105 eye, human retina .a 2623 to 2971 1 to 349       349/349
(100 %)
0 diff
(100 %id)
TI_149290802   .a 2626 to 3387 841 to 86   AAA   756/958
(78 %)
15 diff
(98.5 %id)
BQ669835 epidermoid carcinoma, cell line, salivary gland .a 2632 to 3388 1 to 758   AAA   758/758
(100 %)
3 diff
(99.7 %id)
BQ675535 epidermoid carcinoma, cell line, salivary gland .a 2632 to 3389 1 to 760   AAA   760/760
(100 %)
10 diff
(98.7 %id)
BU191614 epidermoid carcinoma, cell line, salivary gland .a 2633 to 3389 1 to 757   AAA   757/757
(100 %)
5 diff
(99.4 %id)
D78660 placenta .a 2642 to 2941 1 to 304       304/304
(100 %)
6 diff
(98.1 %id)
BU685248 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2657 to 3396 755 to 19   tiling clone, AAA   737/737
(100 %)
3 diff
(99.6 %id)
BU600207 mixed (pool of 40 RNAs) .a 2707 to 3380 1 to 677       677/838
(80 %)
30 diff
(96.5 %id)
BQ002677 Chondrosarcoma, Left Pelvis .a 2771 to 3388 636 to 19   AAA   618/618
(100 %)
0 diff
(100 %id)
AL121229 melanoma (MeWo cell line) .a 2777 to 3160 13 to 396       384/384
(100 %)
4 diff
(99.0 %id)
CD368281 Alveolar Macrophage, lung .a 2781 to 3390 628 to 19   AAA   610/610
(100 %)
0 diff
(100 %id)
BU681864 lung .a 2783 to 3387 624 to 19   AAA   606/606
(100 %)
4 diff
(99.4 %id)
CA437937 lung, Metastatic Chondrosarcoma .a 2783 to 3388 624 to 19   AAA   606/606
(100 %)
3 diff
(99.6 %id)
AA808930   .a 2822 to 3136 7 to 321       315/331
(95 %)
7 diff
(97.9 %id)
DB301712 amygdala .a 2839 to 3388 550 to 1       550/550
(100 %)
0 diff
(100 %id)
EC521285 Prostate .a 2845 to 2932 1 to 87       87/87
(100 %)
1 diff
(98.9 %id)
AU158989 thyroid gland .a 2847 to 3388 554 to 1       554/575
(96 %)
18 diff
(96.9 %id)
AA236521 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2987 to 3398 413 to 4   tiling clone,   410/413
(99 %)
0 diff
(100 %id)
BU734616 eye, lens .a 3210 to 3388 193 to 15   AAA   179/179
(100 %)
0 diff
(100 %id)
AI954240 malignant melanoma, metastatic to lymphnode, skin .a 3258 to 3387 138 to 9       130/138
(94 %)
0 diff
(100 %id)
AK304706 uterus .b 1 to 1546 1 to 1545 R202P C203V H205T S206P Q207S ... tiling clone,   1545/1545
(100 %)
1 diff
(100.0 %id)
DC422409 uterus .b 1 to 547 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC382585 placenta .b 467 to 1051 1 to 586   tiling clone,   586/586
(100 %)
1 diff
(99.9 %id)
DC316883 amygdala .b 637 to 1202 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
BF879440 lung_tumor .b 743 to 1251 515 to 5     Submitted on the opposite strand 511/515
(99 %)
2 diff
(99.7 %id)
BP270272 small intestine .c 1 to 582 2 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DA233982 brain .c 437 to 1016 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
AK309927 placenta .d 1 to 1001 1 to 1001 exact tiling clone,   1001/1001
(100 %)
0 diff
(100 %id)
AB209900 aorta endothelial cell .d 30 to 5591 1 to 5561 L227P tiling clone,   5561/5561
(100 %)
10 diff
(99.9 %id)
CR977662 T-Lymphocytes .d 369 to 926 1 to 559       559/559
(100 %)
2 diff
(99.7 %id)
BU657249 blood .d 1965 to 2544 590 to 11     Submitted on the opposite strand 580/590
(98 %)
0 diff
(100 %id)
DA321591 hippocampus .d 1977 to 2485 2 to 510   capped   509/509
(100 %)
0 diff
(100 %id)
BX377859 Placenta Cot 25-normalized .d 2809 to 3830 1 to 1016       1016/1020
(99 %)
12 diff
(98.9 %id)
BX339150 Placenta Cot 25-normalized .d 2848 to 3890 1 to 1034       1034/1058
(97 %)
19 diff
(98.3 %id)
BF877386 lung_tumor .d 2879 to 3212 22 to 356       335/379
(88 %)
3 diff
(99.3 %id)
BG751852 eye, normal pigmented retinal epithelium .d 2931 to 3773 1 to 839       839/846
(99 %)
14 diff
(98.4 %id)
AL602464 human skeletal muscle .d 2946 to 3547 1 to 602   tiling clone,   602/602
(100 %)
2 diff
(99.7 %id)
BI008267 kidney_tumor .d 2957 to 3502 551 to 7       545/563
(96 %)
0 diff
(100 %id)
BG008549 placenta_normal .d 3435 to 3977 1 to 541       541/541
(100 %)
13 diff
(97.6 %id)
DB124001 thymus .d 3471 to 4042 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BF848106 lung_normal .d 3599 to 3935 342 to 5     Submitted on the opposite strand 338/343
(98 %)
0 diff
(100 %id)
BP330734 rectum .d 3636 to 4217 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BF848114 lung_normal .d 3637 to 3978 344 to 4     Submitted on the opposite strand 341/344
(99 %)
0 diff
(100 %id)
BG337566 leiomyosarcoma cell line, uterus .d 3660 to 4309 1 to 647       647/647
(100 %)
5 diff
(99.3 %id)
BX377858 Placenta Cot 25-normalized .d 4501 to 5546 1035 to 1       1035/1079
(95 %)
23 diff
(97.9 %id)
AW007222 anaplastic oligodendroglioma, brain .d 5050 to 5583 534 to 1       534/534
(100 %)
4 diff
(99.3 %id)
BU075989 Pancreas, Purified pancreatic islet .d 5060 to 5593 537 to 4       534/537
(99 %)
0 diff
(100 %id)
BQ029387 lung, Metastatic Chondrosarcoma .d 5087 to 5608 538 to 17   tiling clone, AAA   522/522
(100 %)
3 diff
(99.5 %id)
BM997531 lung, Metastatic Chondrosarcoma .d 5091 to 5582 510 to 19   AAA   492/500
(98 %)
3 diff
(99.4 %id)
AI539371 pooled .d 5097 to 5583 490 to 3       488/490
(99 %)
0 diff
(100 %id)
AI921069 adenocarcinoma, Pancreas .d 5097 to 5583 497 to 11   AAA   487/487
(100 %)
2 diff
(99.6 %id)
BP198470 adrenal gland .d 5111 to 5596 1 to 486   AAA   486/486
(100 %)
3 diff
(99.4 %id)
BF108915 pooled .d 5134 to 5579 446 to 1       446/446
(100 %)
3 diff
(99.4 %id)
AW274014 pooled .d 5137 to 5593 458 to 2       457/458
(99 %)
0 diff
(100 %id)
AI088068 parathyroid gland, parathyroid tumor .d 5138 to 5580 443 to 1       443/443
(100 %)
3 diff
(99.4 %id)
AI805888 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 5141 to 5583 443 to 1       443/443
(100 %)
3 diff
(99.4 %id)
AI480169 anaplastic oligodendroglioma, brain .d 5141 to 5582 449 to 8       442/449
(98 %)
0 diff
(100 %id)
AW193560 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 5141 to 5583 456 to 13   AAA   444/444
(100 %)
4 diff
(99.1 %id)
AI672206 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 5142 to 5583 461 to 20   AAA   442/442
(100 %)
5 diff
(98.9 %id)
AI016615   .d 5146 to 5591 445 to 1       445/445
(100 %)
4 diff
(99.2 %id)
BX098591 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 5152 to 5583 446 to 15   AAA   432/432
(100 %)
3 diff
(99.4 %id)
AI193864 lung .d 5152 to 5584 445 to 13   AAA   433/433
(100 %)
4 diff
(99.1 %id)
BF445930 breast, invasive ductal carcinoma, 3 pooled samples .d 5160 to 5593 436 to 3       434/436
(99 %)
0 diff
(100 %id)
AI420056 Prostate .d 5186 to 5582 397 to 1       397/397
(100 %)
3 diff
(99.3 %id)
AA991363 breast .d 5196 to 5581 385 to 1       385/385
(100 %)
9 diff
(97.7 %id)
AW268161 brain, three pooled meningiomas .d 5242 to 5582 343 to 2       342/343
(99 %)
0 diff
(100 %id)
AA745071 breast .d 5243 to 5582 333 to 1       333/333
(100 %)
11 diff
(96.7 %id)
AI869819 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 5259 to 5591 348 to 16   AAA   333/333
(100 %)
4 diff
(98.8 %id)
AW050937 colon, colonic mucosa from 3 patients with Crohn'sdisease .d 5284 to 5582 303 to 5       299/303
(98 %)
0 diff
(100 %id)
CR742837 anaplastic oligodendroglioma, brain .d 5288 to 5592 1 to 305       305/305
(100 %)
0 diff
(100 %id)
H11473 whole brain .d 5306 to 5582 285 to 10       276/285
(96 %)
0 diff
(100 %id)
AI273917 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 5355 to 5583 237 to 9       229/237
(96 %)
0 diff
(100 %id)
AA863459 pooled germ cell tumors .d 5423 to 5583 168 to 9       160/168
(95 %)
0 diff
(100 %id)
BU621458 cell lines, Chondrosarcoma .d 5436 to 5582 165 to 19   AAA   147/147
(100 %)
0 diff
(100 %id)
AI363945 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 5447 to 5584 138 to 1       138/138
(100 %)
0 diff
(100 %id)
DB279231 uterus .e 1 to 490 2 to 493   tiling clone, capped   492/492
(100 %)
2 diff
(99.6 %id)
AK095969   .e 5 to 2616 1 to 2612 exact tiling clone, available from FLJ,   2612/2612
(100 %)
6 diff
(99.8 %id)
DA309951 hippocampus .e 5 to 565 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA579484   .e 6 to 572 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
BM834986 stomach .e 21 to 480 1 to 460       460/460
(100 %)
6 diff
(98.7 %id)
BP365415 lung .e 32 to 625 1 to 594   tiling clone,   594/594
(100 %)
0 diff
(100 %id)
DB318979   .e 2078 to 2616 539 to 1       539/539
(100 %)
3 diff
(99.5 %id)
DA464071   .f 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
CA454045   .f 564 to 1399 1 to 851   tiling clone,   851/894
(95 %)
21 diff
(97.7 %id)
DB163695 thymus .g 1 to 585 2 to 586 exact tiling clone, capped   585/585
(100 %)
2 diff
(99.7 %id)
DC333027 hippocampus .h 1 to 543 2 to 545       545/545
(100 %)
1 diff
(99.9 %id)
DC403091 testis .h 1 to 532 2 to 533       533/533
(100 %)
0 diff
(100 %id)
DC403094 testis .h 1 to 570 2 to 571 exact tiling clone,   571/571
(100 %)
0 diff
(100 %id)
DA624498 Kidney .i 1 to 552 2 to 553 exact tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
DA810366 brain .j 1 to 537 2 to 538 exact tiling clone, capped   537/537
(100 %)
1 diff
(99.9 %id)
DB096405 testis .k 1 to 545 2 to 547 G75X A76S C77L R78P C79L ... tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
BP285106 lung .l 1 to 577 2 to 580 R21H     580/581
(99 %)
10 diff
(98.3 %id)
BP287983 lung .l 1 to 582 2 to 583 R21H tiling clone,   583/583
(100 %)
3 diff
(99.5 %id)
BX644172   .m 1 to 565 1 to 566 exact tiling clone,   566/566
(100 %)
1 diff
(99.9 %id)
DA451121 tongue, tumor tissue .n 1 to 553 2 to 554 exact tiling clone, capped   553/553
(100 %)
4 diff
(99.3 %id)
CD607804   Gene SGSH, variant not shown         This clone was ignored    
CD607806   Gene SGSH, variant not shown         This clone was ignored    
BP263886 small intestine Gene SGSH, variant not shown         Suspected internal deletion, this clone was ignored    
BQ359519 head_normal Gene SGSH, variant not shown         Suspected internal deletion, this clone was ignored    
DB309986 hippocampus Gene SGSH, variant not shown         This clone was ignored    
DA338265 hippocampus Gene SGSH, variant not shown       capped This clone was ignored    
AA886438 carcinoid, lung Gene SGSH, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC