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Gene C8orf44andSGK3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
277 supporting clones for gene C8orf44andSGK3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB447859 testis .a 1 to 423 1 to 424   tiling clone,   424/424
(100 %)
1 diff
(99.8 %id)
AK223523   .a 32 to 2643 1 to 2612 F86S tiling clone,   2612/2618
(99 %)
5 diff
(99.9 %id)
DA406288 thalamus .a 33 to 572 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DA415075 thalamus .a 33 to 624 2 to 593   tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
DB491089 hypothalamus .a 46 to 232 1 to 188       188/190
(98 %)
7 diff
(96.4 %id)
DB499925 hypothalamus .a 46 to 529 1 to 484       484/484
(100 %)
2 diff
(99.6 %id)
DB503062 hypothalamus .a 46 to 513 1 to 468       468/469
(99 %)
2 diff
(99.6 %id)
NM_013257.3   .a 47 to 4190 1 to 4144 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 4144/4144
(100 %)
0 diff
(100 %id)
AK291428 brain .b 1 to 2078 1 to 2078 exact tiling clone,   2078/2078
(100 %)
2 diff
(100.0 %id)
DC377069 brain .b 1 to 471 1 to 471       471/471
(100 %)
0 diff
(100 %id)
DC377073 brain .b 1 to 455 1 to 455       455/455
(100 %)
0 diff
(100 %id)
DB451243 testis .b 152 to 631 1 to 480       480/480
(100 %)
0 diff
(100 %id)
NM_001033578.1   .b 239 to 4467 1 to 4229 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 4229/4229
(100 %)
0 diff
(100 %id)
BI598588 brain, hypothalamus .b 306 to 954 1 to 646       647/647
(100 %)
13 diff
(98.0 %id)
TI_45215862   .b 313 to 954 100 to 738       640/739
(86 %)
13 diff
(98.3 %id)
DC311902 alzheimer cortex .b 325 to 963 1 to 639       639/639
(100 %)
0 diff
(100 %id)
CR933673 colon carcinoma .b 344 to 2902 1 to 2559 K191N AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 2559/2559
(100 %)
2 diff
(100.0 %id)
DC384585   .b 360 to 909 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC406495 thymus .b 361 to 900 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC330768 hippocampus .b 366 to 948 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC296745 cord Blood .b 366 to 932 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DC363372   .b 366 to 833 1 to 468       468/468
(100 %)
0 diff
(100 %id)
DC406437 thymus .b 369 to 929 1 to 561       561/561
(100 %)
0 diff
(100 %id)
DB446387 testis .b 383 to 828 1 to 440       440/440
(100 %)
5 diff
(98.9 %id)
DN998725 bone marrow .b 387 to 1109 4 to 725       722/725
(99 %)
6 diff
(99.2 %id)
BQ787765 insulinoma, Pancreas .b 402 to 997 8 to 603       596/603
(98 %)
0 diff
(100 %id)
BX342472   .b 415 to 1368 1 to 935       935/954
(98 %)
22 diff
(97.7 %id)
AF085233   .b 487 to 4473 1 to 3979 F54V D127G F187V L294V T387R tiling clone,   3979/3984
(99 %)
24 diff
(99.4 %id)
AF169035   .b 517 to 2907 1 to 2391 exact tiling clone,   2391/2391
(100 %)
0 diff
(100 %id)
N94726 multiple sclerosis lesions .b 798 to 1251 1 to 454       454/454
(100 %)
0 diff
(100 %id)
N63562 multiple sclerosis lesions .b 2351 to 2903 556 to 1       556/558
(99 %)
10 diff
(98.3 %id)
BQ787582 insulinoma, Pancreas .b 2354 to 2889 536 to 1       536/536
(100 %)
0 diff
(100 %id)
BX649057 Liver .c 1 to 2933 1 to 2933 S121C tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 2933/2933
(100 %)
4 diff
(99.9 %id)
CN428552 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 164 to 408 3 to 245   tiling clone,   243/245
(99 %)
7 diff
(97.2 %id)
FN146508 breast carcinoma .c 305 to 391 1 to 86       86/87
(98 %)
2 diff
(97.8 %id)
BC015326 Breast, mammary adenocarcinoma. .c 515 to 2267 1 to 1753 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 1753/1753
(100 %)
0 diff
(100 %id)
BG030328 breast, mammary adenocarcinoma, cell line .c 516 to 1095 1 to 583       583/976
(59 %)
5 diff
(99.5 %id)
CV023930 mixed .c 569 to 1031 1 to 464       464/464
(100 %)
2 diff
(99.6 %id)
TI_1948133539   .c 569 to 1413 123 to 966       844/1286
(65 %)
45 diff
(96.6 %id)
TI_1948133540   .c 569 to 1542 137 to 1107   AAA   971/1300
(74 %)
20 diff
(98.5 %id)
TI_1948133541   .c 569 to 1418 128 to 976       849/1273
(66 %)
16 diff
(98.8 %id)
TI_1948134075   .c 569 to 1318 124 to 871       748/1330
(56 %)
19 diff
(98.6 %id)
TI_1948134076   .c 569 to 1468 132 to 1032       901/1294
(69 %)
18 diff
(98.7 %id)
TI_1948134077   .c 569 to 1420 128 to 984       857/1245
(68 %)
23 diff
(98.2 %id)
TI_1948135155   .c 569 to 1417 125 to 973       847/1296
(65 %)
18 diff
(98.7 %id)
TI_1948135156   .c 569 to 1519 138 to 1087       950/1326
(71 %)
37 diff
(97.3 %id)
TI_1948135157   .c 569 to 1376 127 to 933       805/1244
(64 %)
13 diff
(99.0 %id)
AI905612 breast .c 614 to 1318 35 to 732       696/792
(87 %)
42 diff
(94.7 %id)
CR536581   .c 770 to 2059 1 to 1290       1290/1290
(100 %)
0 diff
(100 %id)
DA419738 cord Blood .c 812 to 1317 2 to 508   capped   507/507
(100 %)
8 diff
(98.5 %id)
N75655 liver and spleen .c 830 to 1303 1 to 474       474/474
(100 %)
4 diff
(99.2 %id)
AA297704 brain, hippocampus .c 917 to 1214 1 to 298       298/298
(100 %)
0 diff
(100 %id)
AA348656 brain, hippocampus .c 917 to 1087 1 to 171       171/171
(100 %)
1 diff
(99.5 %id)
AW961855   .c 918 to 1330 1 to 413       413/600
(68 %)
3 diff
(99.5 %id)
TI_1948134078   .c 1004 to 2066 1173 to 115       1059/1204
(87 %)
23 diff
(98.1 %id)
TI_1948134079   .c 1036 to 2066 1148 to 119       1030/1319
(78 %)
27 diff
(98.0 %id)
TI_1948133542   .c 1090 to 2066 1090 to 115       976/1213
(80 %)
16 diff
(98.7 %id)
TI_1948135158   .c 1092 to 2066 1096 to 115       979/1222
(80 %)
16 diff
(98.7 %id)
TI_1948135159   .c 1092 to 2066 1103 to 120       984/1332
(73 %)
21 diff
(98.5 %id)
TI_1948134623   .c 1093 to 2066 1087 to 113       971/1209
(80 %)
20 diff
(98.4 %id)
TI_1948133543   .c 1095 to 2066 1102 to 120       980/1329
(73 %)
19 diff
(98.6 %id)
TI_1948134625   .c 1095 to 2066 1084 to 119       966/1108
(87 %)
22 diff
(98.1 %id)
BX328182   .c 1127 to 1991 1 to 865       865/865
(100 %)
9 diff
(99.0 %id)
TI_1948133544   .c 1176 to 2066 1009 to 119       891/1119
(79 %)
11 diff
(99.1 %id)
TI_1948135160   .c 1179 to 2066 1016 to 116       901/1182
(76 %)
24 diff
(98.0 %id)
TI_1948134624   .c 1180 to 2066 1009 to 121       889/1248
(71 %)
4 diff
(99.7 %id)
TI_1948134080   .c 1208 to 2066 979 to 118       862/1157
(74 %)
15 diff
(98.8 %id)
BU557817 adenocarcinoma, cell line, breast .c 1321 to 2202 1 to 887       887/964
(92 %)
13 diff
(98.7 %id)
CB113825 Liver .c 1472 to 1600 1 to 129       129/129
(100 %)
3 diff
(97.7 %id)
BF000023 colon, colon tumor, RER+ .c 1587 to 2267 680 to 1       680/681
(99 %)
7 diff
(99.0 %id)
BE166525 head_neck .c 1623 to 1768 26 to 170       145/170
(85 %)
7 diff
(95.9 %id)
EC520231 Prostate .c 1687 to 1798 119 to 5       115/119
(96 %)
0 diff
(100 %id)
AA887783 colon, colon tumor RER+ .c 1868 to 2042 175 to 1       175/175
(100 %)
4 diff
(97.8 %id)
FN108480 breast carcinoma .c 1888 to 1958 1 to 71       71/71
(100 %)
2 diff
(97.2 %id)
BE160652 head_neck .c 2011 to 2522 525 to 13     Submitted on the opposite strand 513/530
(96 %)
0 diff
(100 %id)
AW821206 stomach .c 2013 to 2149 18 to 153       136/163
(83 %)
4 diff
(97.6 %id)
BI861903 breast, mammary adenocarcinoma, cell line .c 2189 to 2836 1 to 646       646/646
(100 %)
3 diff
(99.6 %id)
TI_57193395   .c 2189 to 2836 59 to 704       646/646
(100 %)
3 diff
(99.6 %id)
BU626531 Alveolar Macrophage, lung .c 2294 to 2933 657 to 18   AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 640/640
(100 %)
1 diff
(99.9 %id)
CD684536 normal nasopharynx .c 2343 to 2866 22 to 545       524/545
(96 %)
6 diff
(98.9 %id)
DA139940 alzheimer cortex .c 2419 to 2972 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
N64807 multiple sclerosis lesions .c 2461 to 2934 493 to 1       493/495
(99 %)
34 diff
(93.2 %id)
DB571071 hypothalamus .c 2472 to 2933 1 to 462     Submitted on the opposite strand 462/462
(100 %)
1 diff
(99.8 %id)
DB556558 hypothalamus .c 2508 to 2933 1 to 427     Submitted on the opposite strand 427/427
(100 %)
3 diff
(99.3 %id)
DB561446 hypothalamus .c 2522 to 2933 1 to 412     Submitted on the opposite strand 412/412
(100 %)
1 diff
(99.8 %id)
DB574268 hypothalamus .c 2534 to 2933 1 to 400     Submitted on the opposite strand 400/400
(100 %)
5 diff
(98.8 %id)
BM754957 Ascites, stomach .c 2595 to 3072 1 to 476       476/476
(100 %)
3 diff
(99.4 %id)
BM739285 Ascites, stomach .c 2606 to 3183 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
BM739201 Ascites, stomach .c 2613 to 3079 1 to 466       466/466
(100 %)
1 diff
(99.8 %id)
BQ777590.
matches multiple genes
Pancreas, Purified pancreatic islet .c 2915 to 3287 378 to 6   tiling clone, also hits gene kloglor 373/378
(98 %)
0 diff
(100 %id)
EL947009 eyeball .c 2934 to 3379 1 to 447       447/447
(100 %)
10 diff
(97.8 %id)
BQ343789 nervous_tumor .c 3106 to 3560 1 to 457       457/457
(100 %)
3 diff
(99.4 %id)
BU177012 melanotic melanoma, skin .c 3183 to 4040 1 to 872       872/880
(99 %)
24 diff
(97.3 %id)
CD104646 Pooled-Skin .c 3220 to 3860 1 to 648       648/796
(81 %)
16 diff
(98.0 %id)
BG898479 cartilage .c 3267 to 3842 86 to 661   tiling clone,   576/593
(97 %)
6 diff
(99.0 %id)
AV714643   .c 3304 to 3933 1 to 630       630/630
(100 %)
0 diff
(100 %id)
BF735233 amnion_normal .c 3308 to 3693 419 to 30     Submitted on the opposite strand 390/419
(93 %)
0 diff
(100 %id)
BQ960013 leiomyosarcoma, uterus .c 3317 to 3962 1 to 646   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 646/646
(100 %)
1 diff
(99.9 %id)
CB958190 Pooled-Glandular .c 3322 to 4088 1 to 778       778/843
(92 %)
20 diff
(97.7 %id)
BU674169 lung, Primary Lung Epithelial Cells .c 3336 to 3618 284 to 1       284/313
(90 %)
3 diff
(99.1 %id)
BQ292257 amnion_normal .c 3348 to 3703 365 to 9       357/365
(97 %)
0 diff
(100 %id)
AV695533 hepatocellular carcinoma .c 3385 to 3723 1 to 338       338/351
(96 %)
7 diff
(98.1 %id)
AV694523 hepatocellular carcinoma .c 3385 to 3967 1 to 583       583/596
(97 %)
6 diff
(99.0 %id)
AI884396 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 3512 to 3962 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AW102916 ovary, tumor, 5 pooled (see description) .c 3513 to 3962 450 to 1       450/450
(100 %)
0 diff
(100 %id)
N43735 melanocyte .c 3567 to 3824 1 to 257       257/257
(100 %)
2 diff
(99.3 %id)
R27132 placenta .c 3582 to 3938 1 to 378       378/378
(100 %)
23 diff
(94.0 %id)
R95103 liver and spleen .c 3606 to 4050 12 to 457       446/462
(96 %)
17 diff
(96.4 %id)
FN165930 breast carcinoma .c 3620 to 3730 1 to 110       110/110
(100 %)
1 diff
(99.1 %id)
BI964800 Islets of Langerhans, Pancreas .c 3622 to 4076 1 to 455       455/455
(100 %)
3 diff
(99.4 %id)
BQ086186 Islets of Langerhans, Pancreas .c 3622 to 4202 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CK822899 Islets of Langerhans, Pancreas .c 3622 to 4229 1 to 608       608/608
(100 %)
0 diff
(100 %id)
BX107304   .c 3632 to 4395 1 to 764   tiling clone,   764/764
(100 %)
1 diff
(99.9 %id)
AA437070   .c 3633 to 4071 1 to 439       439/439
(100 %)
1 diff
(99.8 %id)
BF665552 brain, primitive neuroectoderm .c 3665 to 4264 1 to 600       600/601
(99 %)
1 diff
(99.9 %id)
W55943 parathyroid gland, parathyroid tumor .c 3671 to 4137 1 to 476       476/486
(97 %)
11 diff
(97.8 %id)
FN108496 breast carcinoma .c 3734 to 3817 84 to 1     Submitted on the opposite strand 84/84
(100 %)
0 diff
(100 %id)
N46463.
matches multiple genes
melanocyte .c 3741 to 4063 1 to 326     also hits gene koforby 326/326
(100 %)
8 diff
(97.6 %id)
N24281 melanocyte .c 3743 to 3915 1 to 173       173/173
(100 %)
1 diff
(99.5 %id)
BF675987 Prostate .c 3809 to 4493 1 to 688   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 688/692
(99 %)
22 diff
(96.9 %id)
BU631182 cell lines, Chondrosarcoma .c 3826 to 4498 691 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 673/673
(100 %)
3 diff
(99.6 %id)
DB550700 hippocampus .c 3843 to 4344 1 to 502     Submitted on the opposite strand 502/502
(100 %)
0 diff
(100 %id)
BF698420 brain, primitive neuroectoderm .c 3851 to 4343 207 to 702       496/829
(59 %)
25 diff
(97.0 %id)
CA424768 cell lines, Chondrosarcoma .c 3851 to 4498 666 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 648/648
(100 %)
1 diff
(99.9 %id)
CN430146 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 3854 to 4486 9 to 641       633/643
(98 %)
1 diff
(99.9 %id)
AV686360 hepatocellular carcinoma .c 3866 to 4498 1 to 633   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 633/633
(100 %)
1 diff
(99.9 %id)
AV688745 hepatocellular carcinoma .c 3867 to 4504 1 to 639       639/740
(86 %)
8 diff
(99.0 %id)
AV696192 hepatocellular carcinoma .c 3867 to 4504 1 to 637       637/729
(87 %)
17 diff
(97.7 %id)
AV690866 hepatocellular carcinoma .c 3879 to 4504 20 to 658       639/815
(78 %)
22 diff
(97.4 %id)
TI_149275439   .c 3885 to 4498 679 to 66   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 614/721
(85 %)
7 diff
(99.1 %id)
AW299863 Kidney .c 3898 to 4344 447 to 1       447/447
(100 %)
1 diff
(99.8 %id)
CK822898 Islets of Langerhans, Pancreas .c 3903 to 4501 602 to 4       599/602
(99 %)
0 diff
(100 %id)
N37020 melanocyte .c 3917 to 4498 587 to 1       587/588
(99 %)
17 diff
(97.2 %id)
AW022440 cochlea, ear .c 3949 to 4332 1 to 386       386/386
(100 %)
7 diff
(98.2 %id)
BU676649 lung, Primary Lung Epithelial Cells .c 3950 to 4498 566 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 548/548
(100 %)
3 diff
(99.5 %id)
BQ102291 Islets of Langerhans, Pancreas .c 3951 to 4501 554 to 4       551/554
(99 %)
0 diff
(100 %id)
TI_157607825   .c 3961 to 4504 636 to 93       544/637
(85 %)
0 diff
(100 %id)
AI796009 Kidney .c 3974 to 4498 528 to 1       528/528
(100 %)
6 diff
(98.9 %id)
AI762894 2 pooled tumors (clear cell type), Kidney .c 3977 to 4500 525 to 2       524/525
(99 %)
0 diff
(100 %id)
AI127772 uterus .c 4040 to 4498 475 to 17   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 459/459
(100 %)
0 diff
(100 %id)
AI161430 placenta .c 4046 to 4499 454 to 1       454/454
(100 %)
0 diff
(100 %id)
AW517511 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 4046 to 4500 457 to 3   tiling clone,   455/457
(99 %)
0 diff
(100 %id)
AI651317 Kidney .c 4050 to 4500 450 to 1       450/450
(100 %)
1 diff
(99.8 %id)
AI148646 placenta .c 4057 to 4499 444 to 1       444/445
(99 %)
2 diff
(99.6 %id)
DB516727 testis .c 4061 to 4498 1 to 439     Submitted on the opposite strand 439/439
(100 %)
1 diff
(99.8 %id)
H98714 melanocyte .c 4064 to 4498 437 to 1       437/438
(99 %)
2 diff
(99.6 %id)
BQ181443 Knee, Osteoarthritic Cartilage .c 4065 to 4498 452 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 434/434
(100 %)
0 diff
(100 %id)
AI375182 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4074 to 4500 429 to 3       427/429
(99 %)
0 diff
(100 %id)
AA423971   .c 4075 to 4500 428 to 3       426/428
(99 %)
0 diff
(100 %id)
BQ013936 placenta .c 4075 to 4498 442 to 18   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 425/425
(100 %)
4 diff
(99.1 %id)
EC542641 Prostate .c 4082 to 4175 11 to 101       91/101
(90 %)
6 diff
(94.1 %id)
AA884846 pooled .c 4082 to 4504 424 to 2       423/424
(99 %)
0 diff
(100 %id)
AW969443   .c 4086 to 4488 404 to 1     Submitted on the opposite strand 404/404
(100 %)
12 diff
(97.1 %id)
CF529777 placenta .c 4098 to 4504 421 to 15       407/421
(96 %)
0 diff
(100 %id)
R95104 liver and spleen .c 4127 to 4499 382 to 5       378/384
(98 %)
0 diff
(100 %id)
BI481418 Native Retinal Pigment Epithelium sheets, retina .c 4148 to 4498 12 to 363   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 352/363
(96 %)
5 diff
(98.7 %id)
DB513024 testis .c 4168 to 4489 1 to 327     Submitted on the opposite strand 327/327
(100 %)
8 diff
(97.6 %id)
FN137929 breast carcinoma .c 4173 to 4285 119 to 1     Submitted on the opposite strand 119/124
(95 %)
6 diff
(95.2 %id)
W31346.
matches multiple genes
parathyroid gland, parathyroid tumor .c 4194 to 4345 157 to 6     also hits gene sneereebo 152/157
(96 %)
0 diff
(100 %id)
EC456245 Prostate .c 4221 to 4342 125 to 4       122/125
(97 %)
0 diff
(100 %id)
FN142252 breast carcinoma .c 4228 to 4336 1 to 108       108/109
(99 %)
2 diff
(98.2 %id)
DB511530 testis .c 4284 to 4498 208 to 422     Submitted on the opposite strand 215/422
(50 %)
6 diff
(98.6 %id)
R26897 placenta .c 4333 to 4498 168 to 1       168/171
(98 %)
3 diff
(98.3 %id)
AA483276 colon .c 4347 to 4498 152 to 1       152/152
(100 %)
0 diff
(100 %id)
AK074666 mammary gland .d 1 to 2483 1 to 2483 exact tiling clone, available from FLJ,   2483/2483
(100 %)
1 diff
(100.0 %id)
NM_170709.1   .d 1 to 4048 1 to 4048 exact RefSeq, AAA Possibly primed on the genome, locally A rich (16/17 A in genome downstream of last aligned base) 4048/4048
(100 %)
0 diff
(100 %id)
DA646278 mammary gland .d 2 to 738 2 to 739   capped   738/809
(91 %)
7 diff
(99.2 %id)
DA857082 placenta .d 4 to 556 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DB272119 uterus .d 4 to 571 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DN990968 brain, whole brain .d 15 to 783 20 to 785       766/785
(97 %)
9 diff
(98.9 %id)
DA280442 corpus callosum .d 56 to 640 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
DB097645 testis .d 63 to 657 2 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DB360933 mammary gland .d 1928 to 2483 557 to 1       557/561
(99 %)
18 diff
(96.8 %id)
DC334769 hippocampus .e 1 to 550 1 to 550   tiling clone,   550/550
(100 %)
0 diff
(100 %id)
BI547053 brain, hippocampus .e 1 to 712 6 to 715       715/893
(80 %)
15 diff
(98.4 %id)
TI_44167733   .e 1 to 712 85 to 794       715/972
(73 %)
15 diff
(98.5 %id)
DC363200   .e 25 to 568 1 to 544       544/544
(100 %)
0 diff
(100 %id)
DC295955 synovial membrane tissue from rheumatioidarthritis .e 58 to 588 1 to 532       532/532
(100 %)
1 diff
(99.9 %id)
DC391975 Spleen .e 67 to 621 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC296338 synovial membrane tissue from rheumatioidarthritis .e 67 to 606 1 to 540       540/540
(100 %)
0 diff
(100 %id)
DC414752 trachea .e 67 to 659 1 to 593       593/593
(100 %)
2 diff
(99.7 %id)
DC415019 trachea .e 67 to 590 1 to 524       524/524
(100 %)
1 diff
(99.9 %id)
DC319466 brain .e 70 to 641 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
DC411562 kidney, tumor tissue .e 70 to 653 1 to 584   tiling clone,   584/584
(100 %)
0 diff
(100 %id)
BQ347257 head_neck .e 479 to 995 522 to 5   tiling clone,   518/522
(99 %)
4 diff
(99.3 %id)
BI600179 brain, hypothalamus .f -10 to 859 1 to 871 R135Q S136K S137F Q138* tiling clone,   871/929
(93 %)
27 diff
(97.1 %id)
TI_45212014   .f 1 to 859 98 to 957 R135Q S136K S137F Q138*     864/1015
(85 %)
27 diff
(97.4 %id)
CD356056 Blood vessels - aorta, basilar and artery .g 1 to 399 30 to 429   tiling clone,   400/462
(86 %)
18 diff
(96.2 %id)
BF059772   .g 18 to 1122 3 to 1106 P11Q A12H P14L I15S I17F ... tiling clone,   1104/1106
(99 %)
7 diff
(99.4 %id)
BX283550 epithelioid carcinoma cell line, Pancreas .g 20 to 531 1 to 512       512/513
(99 %)
2 diff
(99.7 %id)
BG830187 epithelioid carcinoma cell line, Pancreas .g 20 to 540 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
BC014448 Pancreas, epithelioid carcinoma .g 21 to 1829 1 to 1810 F148S tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 1810/1810
(100 %)
6 diff
(99.7 %id)
CD236826 Pituitary .g 23 to 727 1 to 705 R37G     705/705
(100 %)
5 diff
(99.3 %id)
AV748989 Pituitary .g 28 to 159 1 to 129       129/132
(97 %)
6 diff
(95.5 %id)
BI193959 epithelioid carcinoma cell line, Pancreas .g 29 to 730 7 to 719 L8R N9Q Q10T P11A A12S ...     713/721
(98 %)
21 diff
(97.1 %id)
TI_1948083714   .g 167 to 647 132 to 612       481/505
(95 %)
7 diff
(98.7 %id)
CV029044 mixed .g 172 to 662 1 to 490 K3N N9S F148S     490/624
(78 %)
8 diff
(98.8 %id)
TI_159681828   .g 373 to 1179 869 to 73   AAA   797/946
(84 %)
22 diff
(97.7 %id)
AI480303 pooled .g 469 to 940 472 to 1       472/472
(100 %)
1 diff
(99.8 %id)
AI439812 lymph node, lymphoma, follicular mixed small and largecell .g 638 to 941 304 to 1       304/304
(100 %)
0 diff
(100 %id)
AI478784 Kidney .g 644 to 1181 541 to 4       538/541
(99 %)
0 diff
(100 %id)
AL706259 human skeletal muscle .g 856 to 1574 1 to 721       721/726
(99 %)
11 diff
(98.5 %id)
FN117510 breast carcinoma .g 990 to 1092 1 to 104       104/104
(100 %)
1 diff
(99.1 %id)
EB386644 eye, optic nerve .g 1054 to 1181 1 to 128       128/176
(72 %)
1 diff
(99.5 %id)
AA551208 adrenal adenoma, adrenal gland .g 1372 to 1838 466 to 1   tiling clone,   466/466
(100 %)
1 diff
(99.8 %id)
BM685157 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 1433 to 1802 1 to 371     Submitted on the opposite strand 371/371
(100 %)
15 diff
(96.0 %id)
BM932155 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 1434 to 1793 360 to 1     Submitted on the opposite strand 360/367
(98 %)
9 diff
(97.6 %id)
AI540426 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g 1515 to 1829 316 to 1       316/316
(100 %)
3 diff
(99.1 %id)
BQ182157 Knee, Osteoarthritic Cartilage .g 1630 to 2215 604 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 586/586
(100 %)
9 diff
(98.5 %id)
BG950103 colon .g 1714 to 2143 1 to 427   tiling clone,   427/433
(98 %)
7 diff
(98.4 %id)
BI667569 brain, hypothalamus .h 1 to 671 1 to 672 R30W K123E R135S S136K S137F ... tiling clone,   672/672
(100 %)
9 diff
(98.7 %id)
TI_44343528   .h 6 to 671 86 to 752 R30W K123E R135S S136K S137F ...     667/752
(88 %)
10 diff
(98.7 %id)
DA225857 brain .i 1 to 530 2 to 532   tiling clone, capped   531/531
(100 %)
1 diff
(99.9 %id)
AW167941 serous papillary carcinoma, high grade, 2pooled tumors, uterus .i 90 to 586 497 to 1   tiling clone,   497/497
(100 %)
0 diff
(100 %id)
BP333625 salivary gland .i 482 to 1066 1 to 585   tiling clone,   585/589
(99 %)
2 diff
(99.7 %id)
BQ708264 Spleen .i 706 to 1489 1 to 791 V109G V118A V130L S133P E139K ...     791/981
(80 %)
31 diff
(96.9 %id)
BQ346371 nervous_tumor .i 765 to 986 249 to 31       219/249
(87 %)
5 diff
(98.0 %id)
BQ641920 lymph, lymphoma, cell line .i 865 to 1759 1 to 898 exact tiling clone,   898/898
(100 %)
10 diff
(98.9 %id)
BQ897969 dorsal root ganglia .i 892 to 1808 1 to 925 exact tiling clone,   925/928
(99 %)
17 diff
(98.2 %id)
DB305207 brain .i 1756 to 2299 544 to 1   tiling clone,   544/544
(100 %)
0 diff
(100 %id)
CB999560 Pooled-Skin .j 1 to 573 1 to 579 D112E R114T A115T L117P Q118F ... tiling clone,   579/833
(69 %)
16 diff
(98.1 %id)
BE090055 breast .k 1 to 477 481 to 5 N30I Y70M A71L V72S V74C ... tiling clone, Submitted on the opposite strand 477/483
(98 %)
4 diff
(99.2 %id)
DA470942   .l 1 to 549 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA246326 brain .m-u 1 to 586 2 to 588 exact tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
CB157340 Liver .m-u 465 to 888 440 to 16   tiling clone, AAA Submitted on the opposite strand 425/425
(100 %)
1 diff
(99.8 %id)
AA515064 Ewing's sarcoma .m-u 474 to 667 194 to 1       194/198
(97 %)
1 diff
(99.5 %id)
DC346612 tongue, tumor tissue .n 1 to 574 1 to 574 exact tiling clone,   574/574
(100 %)
0 diff
(100 %id)
DB265771 uterus .o 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
DB064809 testis .o 7 to 500 2 to 495   capped   494/494
(100 %)
2 diff
(99.6 %id)
DB111638 thymus .o 56 to 604 2 to 550 exact tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
DA341401 substantia nigra .p 1 to 581 2 to 582 F76S tiling clone, capped   581/581
(100 %)
2 diff
(99.7 %id)
CD685347 normal nasopharynx .p 44 to 475 40 to 471 F76S     432/471
(91 %)
8 diff
(98.4 %id)
AK002129 placenta .q 1 to 1816 2 to 1817 exact tiling clone, available from FLJ,   1817/1817
(100 %)
3 diff
(99.9 %id)
NM_019607.1   .q 1 to 1816 2 to 1817 exact RefSeq,   1817/1817
(100 %)
3 diff
(99.9 %id)
AU138726 placenta .q 1 to 659 2 to 660   capped   659/659
(100 %)
0 diff
(100 %id)
AU157722 placenta .q 1233 to 1816 583 to 1       583/583
(100 %)
17 diff
(97.1 %id)
BU190547 large cell carcinoma, lung .r 1 to 591 1 to 591 L85F tiling clone, AAA   591/591
(100 %)
1 diff
(99.9 %id)
CN370405 embryonic stem cells, cell lines H1, H7, andH9 .r 524 to 1240 1 to 717   tiling clone,   717/717
(100 %)
0 diff
(100 %id)
BE148980 head_neck .r 756 to 1142 403 to 18     Submitted on the opposite strand 386/414
(93 %)
0 diff
(100 %id)
DB115699 thymus .r 797 to 1359 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BX497283 Liver .r 935 to 1546 1 to 613       613/613
(100 %)
3 diff
(99.6 %id)
CN370406 embryonic stem cells, cell lines H1, H7, andH9 .r 1073 to 1716 1 to 645   tiling clone,   645/645
(100 %)
3 diff
(99.6 %id)
DA386888 thalamus .r 1216 to 1793 2 to 580   tiling clone, capped   579/579
(100 %)
2 diff
(99.7 %id)
BG825044 muscle, rhabdomyosarcoma .s 1 to 650 1 to 649   tiling clone, AAA   649/867
(74 %)
14 diff
(98.4 %id)
BQ181748 Knee, Osteoarthritic Cartilage .s 494 to 1224 743 to 13 exact tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 731/731
(100 %)
0 diff
(100 %id)
DA379593.
matches multiple genes
thalamus .t-u 1 to 552 2 to 553   tiling clone, capped also hits gene RAD17 552/552
(100 %)
0 diff
(100 %id)
DA388495 thalamus .t-u 13 to 599 2 to 589   tiling clone, capped   588/588
(100 %)
1 diff
(99.9 %id)
BG573112 placenta .t-u 35 to 800 1 to 774 S38K E39* tiling clone,   774/775
(99 %)
13 diff
(98.4 %id)
ES310861 scalp interfollicular dermis, skin .t-u 67 to 388 1 to 322       322/322
(100 %)
2 diff
(99.4 %id)
CD722716 eye, lacrimal gland .u 1 to 597 1 to 597 exact tiling clone,   597/597
(100 %)
0 diff
(100 %id)
EC442613 Prostate .u 549 to 648 1 to 100   tiling clone,   100/100
(100 %)
0 diff
(100 %id)
DA230435 brain .va 1 to 627 2 to 628 F76S tiling clone, capped   627/632
(99 %)
2 diff
(99.7 %id)
DB291591 uterus .va 15 to 594 2 to 581 K57N tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
DB164301 thymus .va 19 to 589 10 to 580 exact capped   571/571
(100 %)
0 diff
(100 %id)
CA418751 Chondrosarcoma Grade II, Left Pelvis .vb 5 to 578 592 to 19 F76S tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 574/574
(100 %)
1 diff
(99.9 %id)
AI634652 Kidney .vb 15 to 575 563 to 3 F76S     561/563
(99 %)
1 diff
(99.9 %id)
BP422823 small intestine .vb 46 to 514 5 to 473 K62X R63F K64X R65K I66N ...   Submitted on the opposite strand 469/473
(99 %)
11 diff
(97.7 %id)
TI_154055857   .vb 92 to 578 587 to 101 F76S AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 591/914
(64 %)
6 diff
(99.4 %id)
AI340051 carcinoid, lung .vb 96 to 574 491 to 13   tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 479/479
(100 %)
0 diff
(100 %id)
AI391514 B-cell, chronic lymphotic leukemia .vb 153 to 582 453 to 24   tiling clone, AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base) 430/430
(100 %)
6 diff
(98.7 %id)
DR979863 placenta .vb 476 to 573 1 to 97     Submitted on the opposite strand 97/102
(95 %)
3 diff
(97.1 %id)
DA440125 tongue, tumor tissue .vc -8 to 566 2 to 576 K62E tiling clone, capped   575/575
(100 %)
3 diff
(99.5 %id)
DB280915 uterus .vd 1 to 497 2 to 498 exact tiling clone, capped   497/497
(100 %)
10 diff
(98.0 %id)
AA372602 colon .vd 115 to 365 251 to 1   tiling clone, Submitted on the opposite strand 251/251
(100 %)
0 diff
(100 %id)
BF094445 uterus_tumor .ve-u 1 to 265 1 to 266 V15S L16F F17I F18L H20P ... tiling clone,   266/266
(100 %)
3 diff
(98.9 %id)
AW816976 stomach .vf-u 1 to 222 1 to 223 F6L S7A A12R G13R E14* tiling clone,   223/223
(100 %)
5 diff
(97.8 %id)
BF377651 testis_normal .vg-u 1 to 206 230 to 28 T17H S18Q T19P W20G D21P ... tiling clone,   203/245
(82 %)
0 diff
(100 %id)
AA363171 ovary Gene C8orf44andSGK3, variant not shown              
AA371863 parathyroid gland Gene C8orf44andSGK3, variant not shown              
AW963347   Gene C8orf44andSGK3, variant not shown              
BG994431 head_neck Gene C8orf44andSGK3, variant not shown         This clone was ignored    
BQ358989 head_neck Gene C8orf44andSGK3, variant not shown         This clone was ignored    
DB311348 thalamus Gene C8orf44andSGK3, variant not shown              
DA379834 thalamus Gene C8orf44andSGK3, variant not shown       capped      
DA393689 thalamus Gene C8orf44andSGK3, variant not shown       capped      
AV683014 hepatocellular carcinoma Gene C8orf44andSGK3, variant not shown         Suspected internal deletion, this clone was ignored    
AV689013 hepatocellular carcinoma Gene C8orf44andSGK3, variant not shown         Suspected internal deletion, this clone was ignored    
AA211107   Gene C8orf44andSGK3, variant not shown         This clone was ignored    
AA211193   Gene C8orf44andSGK3, variant not shown         This clone was ignored    
AA804463 germinal center B cell Gene C8orf44andSGK3, variant not shown         This clone was ignored    
AI351397   Gene C8orf44andSGK3, variant not shown              
AI360382 anaplastic oligodendroglioma, brain Gene C8orf44andSGK3, variant not shown         This clone was ignored    
AI862530 2 pooled tumors (clear cell type), Kidney Gene C8orf44andSGK3, variant not shown         This clone was ignored    
AI935689 Kidney Gene C8orf44andSGK3, variant not shown         This clone was ignored    
AW051671 Kidney Gene C8orf44andSGK3, variant not shown              
AW770240 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney Gene C8orf44andSGK3, variant not shown              
DB328449 placenta Gene C8orf44andSGK3, variant not shown              
DA841469 placenta Gene C8orf44andSGK3, variant not shown       capped      
BU616715 Bone, Subchondral Bone Gene C8orf44andSGK3, variant not shown       AAA Possibly primed on the genome, locally A rich (20/22 A in genome downstream of last aligned base)    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n, .o, .p, .q, .r, .s, .t-u, .u, .va, .vb, .vc, .vd, .ve-u, .vf-u, .vg-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI