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Gene SFTPBTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
440 supporting clones for gene SFTPB back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000542.3   .a 1 to 3666 1 to 3666 exact RefSeq, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 3666/3666
(100 %)
0 diff
(100 %id)
J02761 lung .a 131 to 2119 8 to 1996   tiling clone, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 1989/1996
(99 %)
8 diff
(99.6 %id)
BC032785 Brain, Lung, Testis, adult, pooled whole .a 134 to 2122 1 to 1989   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 1989/1989
(100 %)
0 diff
(100 %id)
M16764   .a 430 to 1822 9 to 1401       1393/1408
(98 %)
4 diff
(99.8 %id)
TI_154015727   .a 884 to 1741 928 to 85   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 844/998
(84 %)
26 diff
(97.4 %id)
BG539093 lung .a 993 to 1707 1 to 713       713/762
(93 %)
41 diff
(94.7 %id)
BG546806 lung .a 1078 to 1823 1 to 737       737/740
(99 %)
26 diff
(96.5 %id)
AA359687 lung .a 1095 to 1328 1 to 234       234/234
(100 %)
1 diff
(99.6 %id)
AA359360 lung .a 1103 to 1364 1 to 262       262/264
(99 %)
4 diff
(98.5 %id)
CA437037 lung, Metastatic Chondrosarcoma .a 1127 to 1741 630 to 16   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 615/615
(100 %)
0 diff
(100 %id)
BQ015779 lung, Metastatic Chondrosarcoma .a 1155 to 1766 626 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 608/608
(100 %)
7 diff
(98.9 %id)
T94896 lung .a 1156 to 1499 1 to 351   fully sequenced,   351/351
(100 %)
15 diff
(95.8 %id)
BQ016054 lung, Metastatic Chondrosarcoma .a 1156 to 1760 621 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 605/605
(100 %)
7 diff
(98.9 %id)
BX094529 lung .a 1157 to 2104 1 to 665       601/665
(90 %)
14 diff
(97.9 %id)
AI820500 lung .a 1158 to 1603 1 to 445       445/445
(100 %)
2 diff
(99.6 %id)
T82364 lung .a 1159 to 1490 1 to 342       342/380
(90 %)
20 diff
(94.8 %id)
BF853875 lung_normal .a 1164 to 1554 396 to 4     Submitted on the opposite strand 393/399
(98 %)
6 diff
(98.5 %id)
BF881584 lung_tumor .a 1165 to 1569 412 to 8     Submitted on the opposite strand 405/412
(98 %)
0 diff
(100 %id)
BI005066 head_normal .a 1187 to 1568 383 to 1       383/383
(100 %)
4 diff
(99.0 %id)
TI_149287027   .a 1210 to 2130 988 to 64   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 925/1163
(79 %)
45 diff
(96.2 %id)
DA586021 lung .a 1218 to 1753 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BQ016646 lung, Metastatic Chondrosarcoma .a 1227 to 1766 558 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 540/540
(100 %)
1 diff
(99.9 %id)
TI_149312490   .a 1227 to 2124 997 to 104   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 894/999
(89 %)
22 diff
(97.8 %id)
AA358068 lung .a 1238 to 1421 1 to 184       184/184
(100 %)
0 diff
(100 %id)
AA317115 lung .a 1243 to 1484 25 to 267       243/267
(91 %)
9 diff
(96.7 %id)
AB439565 lung .a 1243 to 1661 1 to 419       419/419
(100 %)
0 diff
(100 %id)
BF883109 lung_tumor .a 1271 to 1667 1 to 398       398/398
(100 %)
6 diff
(98.5 %id)
T94851 lung .a 1469 to 1852 394 to 1   fully sequenced,   394/394
(100 %)
10 diff
(97.5 %id)
BG547394 lung .a 1538 to 2327 1 to 787   tiling clone,   787/794
(99 %)
16 diff
(98.0 %id)
BG482848 lung .a 1620 to 2386 1 to 767       767/769
(99 %)
17 diff
(97.8 %id)
BQ029860 lung, Metastatic Chondrosarcoma .a 1648 to 2134 499 to 13   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 487/487
(100 %)
0 diff
(100 %id)
BG540336 lung .a 1762 to 2545 1 to 790   tiling clone,   790/791
(99 %)
24 diff
(97.0 %id)
T27865 lung .a 1927 to 2201 1 to 274       274/274
(100 %)
3 diff
(99.0 %id)
AA486875 lung .a 1986 to 2161 1 to 175     Submitted on the opposite strand 175/175
(100 %)
3 diff
(98.3 %id)
T89927 lung .a 2157 to 2194 456 to 497       372/498
(74 %)
17 diff
(96.6 %id)
T89297 lung .a 2399 to 2667 280 to 12   tiling clone,   269/280
(96 %)
0 diff
(100 %id)
CR601923 Placenta Cot 25-normalized .b 1 to 1867 1 to 1867 exact tiling clone,   1867/1867
(100 %)
0 diff
(100 %id)
AL548140 placenta, Placenta Cot 25-normalized .b 1 to 1068 1 to 1064       1064/1064
(100 %)
14 diff
(98.7 %id)
NM_198843.2   .b 1 to 2839 1 to 2839 exact RefSeq, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 2839/2839
(100 %)
0 diff
(100 %id)
AK314947 lung .b 121 to 1282 1 to 1162       1162/1162
(100 %)
1 diff
(100.0 %id)
DA593405 lung .b 122 to 696 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
TI_1948124128   .b 130 to 1001 122 to 996   AAA   875/1352
(64 %)
48 diff
(96.5 %id)
TI_1948124129   .b 130 to 809 119 to 801       683/1392
(49 %)
29 diff
(98.0 %id)
TI_1948125186   .b 130 to 1220 123 to 1212       1090/1366
(79 %)
34 diff
(97.6 %id)
TI_1948125187   .b 130 to 929 125 to 929       805/1362
(59 %)
36 diff
(97.4 %id)
TI_1948125715   .b 130 to 1138 120 to 1127       1008/1360
(74 %)
34 diff
(97.5 %id)
TI_1948125716   .b 130 to 807 124 to 801       678/1408
(48 %)
20 diff
(98.6 %id)
TI_57180905   .b 131 to 660 63 to 598       533/598
(89 %)
11 diff
(98.2 %id)
TI_57183085   .b 131 to 851 64 to 789       726/789
(92 %)
11 diff
(98.7 %id)
TI_57200849   .b 133 to 875 34 to 774       741/775
(95 %)
13 diff
(98.4 %id)
TI_1948125188   .b 133 to 815 127 to 809       683/1364
(50 %)
17 diff
(98.8 %id)
TI_1948125717   .b 133 to 893 122 to 884       758/1401
(54 %)
15 diff
(99.0 %id)
BI824421 pooled brain, lung, testis .b 134 to 875 1 to 740       740/741
(99 %)
8 diff
(99.0 %id)
BI771542 pooled lung and spleen .b 135 to 851 1 to 722       722/722
(100 %)
6 diff
(99.2 %id)
BI768637 pooled lung and spleen .b 136 to 660 1 to 531       528/531
(99 %)
5 diff
(99.1 %id)
CV030637 mixed .b 137 to 753 1 to 616       616/616
(100 %)
2 diff
(99.7 %id)
AA358834 lung .b 141 to 438 1 to 298       298/298
(100 %)
3 diff
(99.0 %id)
TI_57183809   .b 146 to 998 34 to 880       847/932
(90 %)
26 diff
(97.3 %id)
BI767580 pooled lung and spleen .b 147 to 998 1 to 846       846/898
(94 %)
16 diff
(98.3 %id)
CD608834   .b 164 to 977 826 to 12       815/826
(98 %)
10 diff
(98.8 %id)
CD608868   .b 177 to 784 1 to 605       605/612
(98 %)
17 diff
(97.3 %id)
CD608832   .b 180 to 873 1 to 694       694/694
(100 %)
8 diff
(98.9 %id)
CD608833   .b 180 to 620 1 to 441       441/441
(100 %)
1 diff
(99.8 %id)
CD608835   .b 180 to 848 1 to 668       668/668
(100 %)
4 diff
(99.5 %id)
CD608837   .b 180 to 381 202 to 1       202/202
(100 %)
3 diff
(98.6 %id)
CD608840   .b 180 to 440 262 to 2       261/262
(99 %)
2 diff
(99.3 %id)
CD608841   .b 180 to 440 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
CD608842   .b 180 to 440 1 to 262       262/263
(99 %)
3 diff
(98.9 %id)
CD608843   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608844   .b 180 to 429 249 to 1       249/249
(100 %)
3 diff
(98.8 %id)
CD608845   .b 180 to 440 1 to 260       260/261
(99 %)
3 diff
(98.9 %id)
CD608846   .b 180 to 421 240 to 1       240/240
(100 %)
4 diff
(98.4 %id)
CD608847   .b 180 to 440 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
CD608848   .b 180 to 440 1 to 260       260/261
(99 %)
3 diff
(98.9 %id)
CD608849   .b 180 to 440 260 to 1       260/260
(100 %)
2 diff
(99.3 %id)
CD608850   .b 180 to 440 1 to 261       261/262
(99 %)
4 diff
(98.5 %id)
CD608851   .b 180 to 440 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
CD608852   .b 180 to 440 1 to 260       260/261
(99 %)
3 diff
(98.9 %id)
CD608853   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608854   .b 180 to 430 252 to 1       252/252
(100 %)
4 diff
(98.5 %id)
CD608855   .b 180 to 440 254 to 1       256/254
(100 %)
12 diff
(95.3 %id)
CD608856   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608857   .b 180 to 440 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
CD608858   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608859   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608860   .b 180 to 412 232 to 2       231/232
(99 %)
1 diff
(99.6 %id)
CD608861   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608862   .b 180 to 434 255 to 1       255/255
(100 %)
3 diff
(98.9 %id)
CD608863   .b 180 to 440 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
CD608864   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608865   .b 180 to 440 261 to 1       261/261
(100 %)
1 diff
(99.7 %id)
CD608866   .b 180 to 440 1 to 261       261/262
(99 %)
2 diff
(99.3 %id)
CD608869   .b 180 to 772 607 to 17       591/607
(97 %)
4 diff
(99.4 %id)
CD608870   .b 180 to 772 1 to 590       590/607
(97 %)
5 diff
(99.2 %id)
CD608872   .b 180 to 820 90 to 729       640/646
(99 %)
12 diff
(98.2 %id)
CD608838   .b 181 to 398 1 to 215       215/219
(98 %)
8 diff
(96.4 %id)
TI_1948125718   .b 216 to 1281 1180 to 125       1056/1340
(78 %)
42 diff
(96.9 %id)
BF880452 lung_tumor .b 247 to 623 378 to 5     Submitted on the opposite strand 374/378
(98 %)
0 diff
(100 %id)
CD608836   .b 250 to 977 741 to 12       728/741
(98 %)
10 diff
(98.7 %id)
BF881755 lung_tumor .b 262 to 606 1 to 344       344/344
(100 %)
8 diff
(97.7 %id)
BF810589 colon_ins .b 268 to 699 446 to 15     Submitted on the opposite strand 432/446
(96 %)
1 diff
(99.8 %id)
BF810714 colon_ins .b 303 to 699 401 to 2     Submitted on the opposite strand 400/401
(99 %)
5 diff
(98.8 %id)
CD608867   .b 303 to 772 491 to 17       475/491
(96 %)
9 diff
(98.2 %id)
TI_1948125190   .b 332 to 1281 1074 to 129       946/1410
(67 %)
21 diff
(98.6 %id)
TI_1948125719   .b 351 to 1281 1056 to 129       928/1388
(66 %)
15 diff
(99.0 %id)
BG995123 head_neck .b 375 to 797 422 to 1       422/422
(100 %)
4 diff
(99.1 %id)
BF847582 lung_normal .b 384 to 591 3 to 209       207/216
(95 %)
10 diff
(95.4 %id)
BG546288 lung .b 391 to 1029 1 to 640       640/640
(100 %)
3 diff
(99.6 %id)
BF810584 colon_ins .b 392 to 719 349 to 26     Submitted on the opposite strand 324/358
(90 %)
5 diff
(98.7 %id)
BF812040 colon_ins .b 392 to 715 346 to 21     Submitted on the opposite strand 326/355
(91 %)
7 diff
(98.1 %id)
TI_1948124132   .b 400 to 1281 1003 to 128       876/1378
(63 %)
18 diff
(98.7 %id)
TI_1948125191   .b 400 to 1281 1004 to 127       878/1374
(63 %)
20 diff
(98.6 %id)
TI_1948125720   .b 400 to 1281 1005 to 128       878/1431
(61 %)
25 diff
(98.3 %id)
CD608871   .b 401 to 1054 659 to 7       653/659
(99 %)
3 diff
(99.6 %id)
DA589505 lung .b 402 to 903 2 to 503   capped   502/502
(100 %)
1 diff
(99.9 %id)
BF810756 colon_ins .b 403 to 666 264 to 1     Submitted on the opposite strand 264/264
(100 %)
14 diff
(94.7 %id)
TI_1948124131   .b 431 to 1281 977 to 129       849/1339
(63 %)
11 diff
(99.2 %id)
BG547667 lung .b 457 to 987 1 to 541       541/541
(100 %)
11 diff
(98.0 %id)
CD608831   .b 501 to 1061 587 to 22       566/587
(96 %)
6 diff
(99.0 %id)
BG540989 lung .b 514 to 1138 1 to 627       627/863
(72 %)
29 diff
(96.7 %id)
BG541343 lung .b 514 to 1138 1 to 623       623/795
(78 %)
6 diff
(99.3 %id)
TI_1948124130   .b 530 to 1281 881 to 127       755/1418
(53 %)
24 diff
(98.4 %id)
TI_1948125189   .b 531 to 1281 886 to 127       760/1474
(51 %)
23 diff
(98.5 %id)
DB189776 lung, tumor tissue .b 548 to 1123 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
M19097   .b 551 to 1300 1 to 750       750/750
(100 %)
2 diff
(99.8 %id)
BG993815 head_neck .b 637 to 748 12 to 120       109/123
(88 %)
7 diff
(94.4 %id)
BF881537 lung_tumor .b 651 to 1168 537 to 16     Submitted on the opposite strand 522/537
(97 %)
14 diff
(97.4 %id)
BG539914 lung .b 684 to 1301 1 to 623       552/1008
(54 %)
28 diff
(97.3 %id)
AA359400 lung .b 694 to 978 1 to 284       284/284
(100 %)
4 diff
(98.6 %id)
BQ331074 lung_tumor .b 728 to 1138 497 to 82       416/497
(83 %)
9 diff
(98.2 %id)
BQ332093 lung_tumor .b 772 to 1062 1 to 298       298/298
(100 %)
17 diff
(94.3 %id)
AL548099 placenta, Placenta Cot 25-normalized .b 905 to 1867 953 to 1       953/955
(99 %)
19 diff
(98.1 %id)
H64651 nose, olfactory epithelium .b 995 to 1301 1 to 310       310/319
(97 %)
11 diff
(96.6 %id)
BQ329326 lung_normal .b 1033 to 1393 1 to 368       368/368
(100 %)
18 diff
(95.2 %id)
TI_149313245   .b 1055 to 1899 926 to 90   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 835/985
(84 %)
17 diff
(98.3 %id)
BF883036 lung_tumor .b 1057 to 1366 6 to 316       311/316
(98 %)
14 diff
(95.6 %id)
BF883029 lung_tumor .b 1062 to 1254 1 to 193       193/193
(100 %)
9 diff
(95.4 %id)
BG539861 lung .b 1067 to 1525 1 to 464       464/736
(63 %)
14 diff
(98.1 %id)
BE828041 lung_tumor .b 1089 to 1416 329 to 1       329/329
(100 %)
15 diff
(95.5 %id)
BF883047 lung_tumor .b 1095 to 1560 5 to 469       465/469
(99 %)
6 diff
(98.8 %id)
BF883049 lung_tumor .b 1103 to 1504 35 to 435       401/435
(92 %)
6 diff
(98.7 %id)
AA485554 lung .b 1140 to 1252 1 to 105       107/105
(101 %)
11 diff
(89.6 %id)
TI_154043249   .b 1144 to 1899 839 to 84   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 756/976
(77 %)
8 diff
(99.2 %id)
CN480478 lung, Lung Focal Fibrosis .b 1152 to 1899 765 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 747/751
(99 %)
6 diff
(99.3 %id)
TI_154022602   .b 1189 to 1899 799 to 86   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 714/720
(99 %)
2 diff
(99.8 %id)
CF541277 lung .b 1216 to 1899 702 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 684/684
(100 %)
0 diff
(100 %id)
CA439044 lung, Lung Focal Fibrosis .b 1225 to 1899 693 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 675/675
(100 %)
0 diff
(100 %id)
CA439097 lung, Lung Focal Fibrosis .b 1229 to 1899 690 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 672/672
(100 %)
0 diff
(100 %id)
BF882535 lung_tumor .b 1242 to 1389 156 to 5     Submitted on the opposite strand 152/156
(97 %)
3 diff
(98.1 %id)
AB439563 lung .b 1243 to 2083 1 to 841       841/841
(100 %)
0 diff
(100 %id)
BQ329863 lung_normal .b 1295 to 1620 331 to 9       323/331
(97 %)
0 diff
(100 %id)
BG482852 lung .b 1295 to 1850 1 to 555   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 555/555
(100 %)
1 diff
(99.9 %id)
TI_154092992   .b 1298 to 1899 719 to 110   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 610/1044
(58 %)
21 diff
(98.0 %id)
W05724 lung .b 1303 to 1564 1 to 261       261/276
(94 %)
1 diff
(99.7 %id)
CA440551 lung, Lung Focal Fibrosis .b 1320 to 1899 598 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 580/580
(100 %)
1 diff
(99.9 %id)
AA488696 lung .b 1329 to 1825 1 to 495       495/495
(100 %)
2 diff
(99.6 %id)
BQ029340 lung, Metastatic Chondrosarcoma .b 1350 to 1899 568 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 550/550
(100 %)
0 diff
(100 %id)
AW950090   .b 1373 to 1899 1 to 527   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 527/527
(100 %)
0 diff
(100 %id)
BM992763 lung, Metastatic Chondrosarcoma .b 1380 to 1899 538 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 520/520
(100 %)
0 diff
(100 %id)
AW276646 lung, two pooled squamous cell carcinomas .b 1381 to 1901 521 to 1       521/521
(100 %)
0 diff
(100 %id)
CR742421 lung .b 1398 to 1899 1 to 502   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 502/502
(100 %)
0 diff
(100 %id)
T63732 lung .b 1418 to 1835 1 to 423       423/428
(98 %)
17 diff
(96.1 %id)
AA493505 thyroid .b 1423 to 1876 460 to 8       453/460
(98 %)
0 diff
(100 %id)
BM993202 lung, Metastatic Chondrosarcoma .b 1442 to 1899 476 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 458/458
(100 %)
0 diff
(100 %id)
AI984209 four pooled poorly-differentiatedadenocarcinomas, lung .b 1445 to 1901 457 to 1       457/457
(100 %)
0 diff
(100 %id)
T57812 lung .b 1448 to 1902 475 to 5       471/525
(89 %)
0 diff
(100 %id)
H64550 nose, olfactory epithelium .b 1448 to 1872 429 to 1       429/429
(100 %)
7 diff
(98.4 %id)
N90716 lung .b 1455 to 1899 432 to 1       432/434
(99 %)
20 diff
(95.4 %id)
AI950867 lung, two pooled squamous cell carcinomas .b 1457 to 1897 453 to 13   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 441/441
(100 %)
0 diff
(100 %id)
T60069 lung .b 1474 to 1893 432 to 10       423/436
(97 %)
0 diff
(100 %id)
BQ019106 lung, Metastatic Chondrosarcoma .b 1484 to 1899 434 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 416/417
(99 %)
3 diff
(99.3 %id)
T92529 lung .b 1495 to 1894 1 to 406       406/409
(99 %)
14 diff
(96.6 %id)
T91534 lung .b 1511 to 1785 1 to 286       286/370
(77 %)
11 diff
(97.1 %id)
AA829796 carcinoid, lung .b 1516 to 1901 387 to 1       387/387
(100 %)
2 diff
(99.5 %id)
AA634104 lung .b 1518 to 1901 384 to 1       384/384
(100 %)
3 diff
(99.3 %id)
BF844652 head_neck .b 1523 to 2180 652 to 4     Submitted on the opposite strand 649/701
(92 %)
0 diff
(100 %id)
BF852694 lung_normal .b 1526 to 1802 1 to 276       276/328
(84 %)
5 diff
(98.5 %id)
BM998916 lung, Lung Focal Fibrosis .b 1539 to 1899 379 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 361/369
(97 %)
0 diff
(100 %id)
BE826659 lung_normal .b 1543 to 2083 29 to 583       555/611
(90 %)
27 diff
(95.6 %id)
AA551528 thyroid .b 1544 to 1876 340 to 8       333/340
(97 %)
0 diff
(100 %id)
AA298038 lung .b 1555 to 1844 1 to 290       290/290
(100 %)
0 diff
(100 %id)
BF853958 lung_normal .b 1566 to 1836 1 to 271       271/271
(100 %)
1 diff
(99.7 %id)
BF883064 lung_tumor .b 1566 to 1780 213 to 1     Submitted on the opposite strand 213/213
(100 %)
7 diff
(96.8 %id)
BF883066 lung_tumor .b 1566 to 1767 201 to 1     Submitted on the opposite strand 201/201
(100 %)
3 diff
(98.6 %id)
BE828528 lung_tumor .b 1572 to 1951 5 to 393       389/393
(98 %)
6 diff
(98.5 %id)
AA634041 lung .b 1608 to 1902 298 to 3       296/298
(99 %)
0 diff
(100 %id)
N74880 lung .b 1623 to 1899 278 to 1       278/530
(52 %)
4 diff
(99.3 %id)
CA439806 lung, Lung Focal Fibrosis .b 1636 to 1899 282 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 264/264
(100 %)
0 diff
(100 %id)
BG483990 lung .b 1641 to 1897 1 to 257   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 257/257
(100 %)
1 diff
(99.7 %id)
T90419 lung .b 1656 to 1900 1 to 244   fully sequenced,   244/244
(100 %)
2 diff
(99.2 %id)
CA436012 lung, Metastatic Chondrosarcoma .b 1657 to 1899 263 to 21       243/263
(92 %)
0 diff
(100 %id)
CA439057 lung, Lung Focal Fibrosis .b 1664 to 1897 30 to 264   AAA Submitted on the opposite strand 235/264
(89 %)
6 diff
(97.8 %id)
H64685 nose, olfactory epithelium .b 1665 to 1872 219 to 12     Submitted on the opposite strand 208/244
(85 %)
0 diff
(100 %id)
T60644 lung .b 1685 to 1901 1 to 217       217/217
(100 %)
2 diff
(99.1 %id)
BM988749 lung, Lung Focal Fibrosis .b 1692 to 1870 66 to 244   AAA Submitted on the opposite strand 179/244
(73 %)
6 diff
(97.6 %id)
BM993183 lung, Metastatic Chondrosarcoma .b 1708 to 1899 211 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 193/193
(100 %)
1 diff
(99.5 %id)
BE826596 lung_normal .b 1747 to 1864 1 to 118       118/118
(100 %)
1 diff
(99.2 %id)
T90329 lung .b 1773 to 1899 130 to 5   fully sequenced,   126/130
(96 %)
3 diff
(97.7 %id)
TI_154092979   .b 1790 to 2478 821 to 116       706/1063
(66 %)
0 diff
(100 %id)
CA435153 lung, Lung Focal Fibrosis .b 1795 to 2475 698 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 680/680
(100 %)
2 diff
(99.8 %id)
BM989941 lung, Lung Focal Fibrosis .b 1796 to 2475 697 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 679/679
(100 %)
2 diff
(99.8 %id)
BM991100 lung, Lung Focal Fibrosis .b 1796 to 2473 697 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 679/679
(100 %)
3 diff
(99.6 %id)
BE828533 lung_tumor .b 1807 to 2018 213 to 1       213/213
(100 %)
8 diff
(96.3 %id)
BM998931 lung, Lung Focal Fibrosis .b 1810 to 2475 684 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 666/670
(99 %)
5 diff
(99.3 %id)
CV314055 lung_tumor .b 1814 to 2163 357 to 1     Submitted on the opposite strand 357/357
(100 %)
20 diff
(94.4 %id)
CA435379 lung, Metastatic Chondrosarcoma .b 1827 to 2471 662 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 644/644
(100 %)
3 diff
(99.6 %id)
CA437052 lung, Metastatic Chondrosarcoma .b 1852 to 2475 639 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 623/623
(100 %)
2 diff
(99.7 %id)
BM993050 lung, Metastatic Chondrosarcoma .b 1861 to 2471 630 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 612/612
(100 %)
3 diff
(99.6 %id)
CN480464 lung, Lung Focal Fibrosis .b 1861 to 2475 633 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 615/615
(100 %)
1 diff
(99.9 %id)
CA440540 lung, Lung Focal Fibrosis .b 1875 to 2478 619 to 16       604/619
(97 %)
0 diff
(100 %id)
BF883606 lung_tumor .b 1883 to 2224 344 to 4     Submitted on the opposite strand 341/344
(99 %)
0 diff
(100 %id)
CA437348 lung, Metastatic Chondrosarcoma .b 1891 to 2475 601 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 585/585
(100 %)
0 diff
(100 %id)
AI820718 lung .b 1897 to 2408 1 to 511       511/511
(100 %)
1 diff
(99.9 %id)
T94965 lung .b 1898 to 2232 1 to 349       349/379
(92 %)
18 diff
(95.3 %id)
BM992543 lung, Metastatic Chondrosarcoma .b 1898 to 2475 593 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 577/577
(100 %)
3 diff
(99.5 %id)
BM996624 lung, Metastatic Chondrosarcoma .b 1912 to 2475 574 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 558/558
(100 %)
5 diff
(99.2 %id)
BQ029397 lung, Metastatic Chondrosarcoma .b 1942 to 2471 548 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 530/530
(100 %)
0 diff
(100 %id)
T90266 lung .b 1948 to 2207 1 to 266   fully sequenced,   266/266
(100 %)
3 diff
(98.9 %id)
T91506 lung .b 1992 to 2475 490 to 1       490/490
(100 %)
9 diff
(98.2 %id)
T91765 lung .b 2138 to 2436 306 to 1       306/350
(87 %)
13 diff
(96.3 %id)
T90708 lung .b 2177 to 2474 310 to 1   fully sequenced,   310/310
(100 %)
3 diff
(99.1 %id)
DQ317589   .c 1 to 1740 1 to 1740 K90E T127I G131S Q148* tiling clone, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 1740/1740
(100 %)
9 diff
(99.5 %id)
AA359702 lung .c 733 to 1059 1 to 329       329/336
(97 %)
8 diff
(97.7 %id)
BI821350 pooled brain, lung, testis .d 1 to 481 1 to 481   tiling clone,   481/754
(63 %)
1 diff
(99.9 %id)
TI_57200423   .d 1 to 482 22 to 504       483/700
(69 %)
12 diff
(98.3 %id)
TI_57200499   .d 1 to 481 64 to 544       481/886
(54 %)
7 diff
(99.3 %id)
BI821274 pooled brain, lung, testis .d 2 to 482 1 to 483       483/679
(71 %)
12 diff
(98.3 %id)
BF880854 lung_tumor .d 237 to 721 23 to 500   tiling clone,   478/503
(95 %)
16 diff
(96.9 %id)
BF884553 lung_tumor .d 238 to 587 1 to 353   tiling clone,   353/374
(94 %)
27 diff
(92.8 %id)
CV354882 lung_normal .d 345 to 516 1 to 172       172/172
(100 %)
2 diff
(98.9 %id)
CV356487 nervous_tumor .d 346 to 451 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
BF881220 lung_tumor .d 548 to 702 153 to 2   tiling clone, Submitted on the opposite strand 152/153
(99 %)
0 diff
(100 %id)
DA588045 lung .d 666 to 1253 2 to 589   tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
BF851287 lung_normal .d 755 to 947 198 to 2     Submitted on the opposite strand 197/220
(89 %)
0 diff
(100 %id)
BE826047 lung_normal .d 893 to 1273 1 to 382   tiling clone,   382/390
(97 %)
6 diff
(98.5 %id)
DA591536 lung .e-u 1 to 494 2 to 494   tiling clone, capped   493/493
(100 %)
2 diff
(99.6 %id)
BG546854 lung .e-u 46 to 647 1 to 605       605/605
(100 %)
5 diff
(99.2 %id)
BF852898 lung_normal .e-u 159 to 688 1 to 529       529/529
(100 %)
5 diff
(99.1 %id)
BF853763 lung_normal .e-u 159 to 710 1 to 551       551/556
(99 %)
5 diff
(99.2 %id)
BF868557 lung_tumor .e-u 227 to 684 458 to 1     Submitted on the opposite strand 458/458
(100 %)
4 diff
(99.2 %id)
AA358793 lung .e-u 275 to 533 1 to 259       259/259
(100 %)
1 diff
(99.7 %id)
AA315777 lung .e-u 291 to 529 1 to 239       239/239
(100 %)
0 diff
(100 %id)
BF106074 lung .e-u 360 to 1062 1 to 698       698/842
(82 %)
27 diff
(96.8 %id)
T64286 lung .e-u 379 to 580 1 to 200   fully sequenced,   200/200
(100 %)
4 diff
(98.0 %id)
TI_149315351   .e-u 400 to 1239 910 to 83   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 828/965
(85 %)
18 diff
(98.2 %id)
AI857989 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e-u 403 to 886 483 to 1       483/526
(91 %)
24 diff
(95.5 %id)
BQ301406 bocio_tumor .e-u 412 to 993 42 to 620       579/620
(93 %)
6 diff
(99.1 %id)
BF851128 lung_normal .e-u 414 to 1036 5 to 621   tiling clone,   617/621
(99 %)
10 diff
(98.4 %id)
BF883116 lung_tumor .e-u 414 to 816 44 to 446       403/446
(90 %)
6 diff
(98.7 %id)
BF883118 lung_tumor .e-u 414 to 802 34 to 421       388/423
(91 %)
9 diff
(97.9 %id)
BG546116 lung .e-u 414 to 1186 5 to 796       792/796
(99 %)
6 diff
(99.3 %id)
BF883127 lung_tumor .e-u 416 to 861 15 to 484       470/484
(97 %)
56 diff
(88.5 %id)
AI830902 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e-u 418 to 887 469 to 1       469/474
(98 %)
27 diff
(94.4 %id)
TI_149302302   .e-u 418 to 1239 894 to 85   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 810/963
(84 %)
14 diff
(98.6 %id)
TI_149309784   .e-u 418 to 1244 915 to 98   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 818/917
(89 %)
15 diff
(98.4 %id)
AW264840 lung, two pooled squamous cell carcinomas .e-u 419 to 865 448 to 1       448/448
(100 %)
9 diff
(98.0 %id)
TI_154007861   .e-u 427 to 1244 899 to 95   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 805/947
(85 %)
19 diff
(98.0 %id)
T82399 lung .e-u 430 to 654 1 to 227   fully sequenced,   227/227
(100 %)
2 diff
(99.2 %id)
T98140 lung .e-u 432 to 601 1 to 170   fully sequenced,   170/170
(100 %)
0 diff
(100 %id)
AA315389 lung .e-u 433 to 707 1 to 275       275/275
(100 %)
6 diff
(97.9 %id)
BF851124 lung_normal .e-u 433 to 1000 1 to 558       558/560
(99 %)
26 diff
(95.4 %id)
BG545599 lung .e-u 442 to 1214 1 to 772       772/932
(82 %)
18 diff
(98.1 %id)
AA488019 lung .e-u 447 to 711 1 to 265   fully sequenced,   265/265
(100 %)
1 diff
(99.7 %id)
TI_149299469   .e-u 448 to 1253 899 to 104       796/1051
(75 %)
0 diff
(100 %id)
T62006 lung .e-u 450 to 775 1 to 339       339/379
(89 %)
15 diff
(96.1 %id)
AA634824 lung .e-u 459 to 994 1 to 536       536/536
(100 %)
3 diff
(99.5 %id)
T93151 lung .e-u 463 to 855 1 to 400       400/403
(99 %)
22 diff
(94.6 %id)
BI524124 pooled lung and spleen .e-u 471 to 886 1 to 416   AAA   416/416
(100 %)
2 diff
(99.6 %id)
TI_44158740   .e-u 471 to 886 67 to 482   fully sequenced, AAA   416/482
(86 %)
6 diff
(98.8 %id)
AA358541 lung .e-u 504 to 791 1 to 290       290/290
(100 %)
4 diff
(98.7 %id)
TI_44158741   .e-u 510 to 836 326 to 1   fully sequenced,   326/326
(100 %)
3 diff
(99.1 %id)
AA679333   .e-u 520 to 1016 500 to 6     Submitted on the opposite strand 495/500
(99 %)
0 diff
(100 %id)
BQ331111 lung_tumor .e-u 527 to 886 6 to 365       360/365
(98 %)
6 diff
(98.4 %id)
TI_154097746   .e-u 529 to 1249 807 to 98   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 710/783
(90 %)
44 diff
(94.4 %id)
BQ045252 lung, Primary Lung Cystic Fibrosis EpithelialCells .e-u 529 to 1239 729 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 711/711
(100 %)
1 diff
(99.9 %id)
TI_149286204   .e-u 532 to 1253 793 to 74       720/794
(90 %)
0 diff
(100 %id)
BF847038 lung_normal .e-u 547 to 811 271 to 7     Submitted on the opposite strand 265/271
(97 %)
0 diff
(100 %id)
T64157 lung .e-u 550 to 924 392 to 1   fully sequenced,   392/392
(100 %)
18 diff
(95.5 %id)
TI_149294337   .e-u 554 to 1239 769 to 82   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 688/692
(99 %)
9 diff
(98.7 %id)
TI_149285779   .e-u 555 to 1249 792 to 100   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 693/693
(100 %)
3 diff
(99.6 %id)
BU681016 lung .e-u 559 to 1253 697 to 5       693/697
(99 %)
0 diff
(100 %id)
BU688152 lung .e-u 562 to 1244 698 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 682/682
(100 %)
3 diff
(99.6 %id)
BM980524 lung, Primary Lung Cystic Fibrosis EpithelialCells .e-u 562 to 1239 696 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 678/678
(100 %)
1 diff
(99.9 %id)
TI_149277331   .e-u 566 to 1253 806 to 121       686/807
(85 %)
0 diff
(100 %id)
BM978061 lung .e-u 576 to 1244 685 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 669/669
(100 %)
1 diff
(99.9 %id)
BM971660 lung .e-u 578 to 1249 685 to 15   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 671/672
(99 %)
2 diff
(99.8 %id)
BM975795 lung, Primary Lung Cystic Fibrosis EpithelialCells .e-u 579 to 1253 680 to 10       671/680
(98 %)
0 diff
(100 %id)
TI_149292752   .e-u 583 to 1253 769 to 99       671/805
(83 %)
0 diff
(100 %id)
T98049 lung .e-u 584 to 924 345 to 1   fully sequenced,   345/345
(100 %)
9 diff
(97.4 %id)
BF513218   .e-u 594 to 886 311 to 18   AAA   294/301
(97 %)
5 diff
(98.4 %id)
BF881883 lung_tumor .e-u 597 to 1083 493 to 7     Submitted on the opposite strand 487/493
(98 %)
0 diff
(100 %id)
T63017 lung .e-u 601 to 720 1 to 120   fully sequenced,   120/120
(100 %)
2 diff
(98.4 %id)
CA444303 lung, Metastatic Chondrosarcoma .e-u 610 to 1239 648 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 630/630
(100 %)
0 diff
(100 %id)
AA622601 lung, lung tumor .e-u 611 to 1084 467 to 1       467/467
(100 %)
14 diff
(97.1 %id)
BF854048 lung_normal .e-u 615 to 1213 602 to 4     Submitted on the opposite strand 599/602
(99 %)
0 diff
(100 %id)
CA440850 lung, Metastatic Chondrosarcoma .e-u 617 to 1249 646 to 15   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 632/632
(100 %)
3 diff
(99.6 %id)
AI821345 lung .e-u 624 to 1084 459 to 1       459/459
(100 %)
3 diff
(99.4 %id)
T57845 lung .e-u 624 to 924 316 to 1   fully sequenced,   316/316
(100 %)
7 diff
(97.8 %id)
BM999261 lung, Lung Focal Fibrosis .e-u 629 to 1244 635 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 617/617
(100 %)
3 diff
(99.6 %id)
CA439827 lung, Lung Focal Fibrosis .e-u 629 to 1239 629 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 611/611
(100 %)
1 diff
(99.9 %id)
BM998827 lung, Lung Focal Fibrosis .e-u 631 to 1239 627 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 609/684
(89 %)
0 diff
(100 %id)
BM991206 lung, Lung Focal Fibrosis .e-u 634 to 1253 629 to 10       620/629
(98 %)
0 diff
(100 %id)
BM993607 lung, Metastatic Chondrosarcoma .e-u 634 to 1218 603 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 585/585
(100 %)
1 diff
(99.9 %id)
BU677588 lung .e-u 634 to 1253 627 to 10       618/627
(98 %)
0 diff
(100 %id)
CA435073 lung, Lung Focal Fibrosis .e-u 634 to 1244 629 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 611/611
(100 %)
1 diff
(99.9 %id)
AW298656   .e-u 638 to 944 332 to 27   AAA   306/315
(97 %)
0 diff
(100 %id)
TI_149289909   .e-u 642 to 1253 698 to 91       608/760
(80 %)
0 diff
(100 %id)
T71948 lung .e-u 644 to 1014 1 to 379       379/460
(82 %)
12 diff
(97.4 %id)
W00695 lung .e-u 645 to 1009 1 to 350   fully sequenced,   350/350
(100 %)
0 diff
(100 %id)
AA358796 lung .e-u 648 to 995 1 to 348       348/348
(100 %)
1 diff
(99.8 %id)
AA486724 lung .e-u 649 to 1084 435 to 1       435/435
(100 %)
4 diff
(99.1 %id)
AI336293 lung .e-u 650 to 1244 607 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 591/595
(99 %)
11 diff
(98.2 %id)
BM972416 lung .e-u 651 to 1249 612 to 15   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 598/598
(100 %)
4 diff
(99.4 %id)
BQ030299 lung, Metastatic Chondrosarcoma .e-u 664 to 1253 600 to 10       591/600
(98 %)
0 diff
(100 %id)
AA487826 lung .e-u 680 to 915 1 to 243   fully sequenced,   243/243
(100 %)
0 diff
(100 %id)
AA487906 lung .e-u 681 to 987 306 to 1   fully sequenced,   306/306
(100 %)
1 diff
(99.7 %id)
T63163 lung .e-u 698 to 894 219 to 23   fully sequenced,   197/219
(89 %)
0 diff
(100 %id)
W16512 lung .e-u 701 to 1134 1 to 424   fully sequenced,   424/424
(100 %)
4 diff
(99.1 %id)
BM974815 lung .e-u 701 to 1253 562 to 10       553/562
(98 %)
0 diff
(100 %id)
BG547587 lung .e-u 714 to 1244 1 to 531   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 531/531
(100 %)
1 diff
(99.9 %id)
BM993554 lung, Metastatic Chondrosarcoma .e-u 716 to 1244 546 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 530/530
(100 %)
1 diff
(99.9 %id)
BM996334 lung, Metastatic Chondrosarcoma .e-u 716 to 1244 546 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 530/530
(100 %)
1 diff
(99.9 %id)
BM996550 lung, Metastatic Chondrosarcoma .e-u 716 to 1249 547 to 15   tiling clone, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 533/533
(100 %)
1 diff
(99.9 %id)
BU683117 lung .e-u 716 to 1239 543 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 525/525
(100 %)
3 diff
(99.5 %id)
AI924765 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e-u 717 to 1241 526 to 1       526/526
(100 %)
2 diff
(99.7 %id)
BM993329 lung, Metastatic Chondrosarcoma .e-u 724 to 1244 537 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 521/521
(100 %)
1 diff
(99.9 %id)
TI_154010749   .e-u 725 to 1244 660 to 140   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 521/1123
(46 %)
3 diff
(99.8 %id)
AI860315 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e-u 726 to 1241 516 to 1       516/521
(99 %)
5 diff
(99.1 %id)
BM993391 lung, Metastatic Chondrosarcoma .e-u 726 to 1238 530 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 512/512
(100 %)
7 diff
(98.7 %id)
T57802 lung .e-u 731 to 1205 487 to 1       487/490
(99 %)
18 diff
(96.4 %id)
AA315937 lung .e-u 740 to 1015 1 to 276       276/276
(100 %)
0 diff
(100 %id)
AA847605 carcinoid, lung .e-u 740 to 1253 515 to 2       514/515
(99 %)
0 diff
(100 %id)
BQ029275 lung, Metastatic Chondrosarcoma .e-u 752 to 1244 509 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 493/493
(100 %)
0 diff
(100 %id)
BM993944 lung, Metastatic Chondrosarcoma .e-u 757 to 1253 506 to 10       497/506
(98 %)
0 diff
(100 %id)
BM994122 lung, Metastatic Chondrosarcoma .e-u 774 to 1244 484 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 468/468
(100 %)
1 diff
(99.8 %id)
AI922142 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .e-u 783 to 1238 456 to 1       456/456
(100 %)
2 diff
(99.6 %id)
BM993190 lung, Metastatic Chondrosarcoma .e-u 786 to 1236 469 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 451/451
(100 %)
6 diff
(98.7 %id)
AI191363 lung .e-u 788 to 1239 466 to 15   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 452/452
(100 %)
0 diff
(100 %id)
BM973064 lung .e-u 788 to 1253 475 to 10       466/475
(98 %)
0 diff
(100 %id)
CA435684 lung, Metastatic Chondrosarcoma .e-u 790 to 1244 471 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 455/455
(100 %)
0 diff
(100 %id)
T57165 lung .e-u 793 to 1011 1 to 219   fully sequenced,   219/219
(100 %)
0 diff
(100 %id)
AA630264 lung .e-u 793 to 1084 293 to 1       293/293
(100 %)
1 diff
(99.7 %id)
AI820554 lung .e-u 795 to 1085 1 to 291       291/291
(100 %)
0 diff
(100 %id)
T65975 lung .e-u 795 to 1249 468 to 1       468/575
(81 %)
24 diff
(95.9 %id)
T64552 lung .e-u 796 to 1145 1 to 356       356/461
(77 %)
8 diff
(98.3 %id)
N91128 lung .e-u 798 to 1244 468 to 28   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 441/450
(98 %)
12 diff
(97.4 %id)
T57188 lung .e-u 800 to 1229 1 to 450   fully sequenced,   450/450
(100 %)
25 diff
(94.5 %id)
AA630433 lung .e-u 812 to 1084 273 to 1       273/273
(100 %)
0 diff
(100 %id)
AI821343 lung .e-u 814 to 1084 271 to 1       271/271
(100 %)
0 diff
(100 %id)
AA972350 carcinoid, lung .e-u 820 to 1244 462 to 38   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 425/425
(100 %)
2 diff
(99.6 %id)
AI278656 carcinoid, lung .e-u 821 to 1247 428 to 2       427/428
(99 %)
0 diff
(100 %id)
AW273558 lung, two pooled squamous cell carcinomas .e-u 828 to 1015 189 to 1       189/189
(100 %)
11 diff
(94.2 %id)
AI350216 carcinoid, lung .e-u 833 to 1244 441 to 30   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 412/412
(100 %)
2 diff
(99.6 %id)
BQ029491 lung, Metastatic Chondrosarcoma .e-u 847 to 1253 416 to 10       407/416
(97 %)
0 diff
(100 %id)
T62196 lung .e-u 856 to 923 68 to 1       68/68
(100 %)
0 diff
(100 %id)
BE825698 lung_normal .e-u 860 to 1129 45 to 318       274/318
(86 %)
6 diff
(98.2 %id)
AA911267 carcinoid, lung .e-u 874 to 1238 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
AA487976 lung .e-u 885 to 1084 200 to 1   fully sequenced,   200/200
(100 %)
0 diff
(100 %id)
BQ029899 lung, Metastatic Chondrosarcoma .e-u 894 to 1218 343 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 325/325
(100 %)
0 diff
(100 %id)
T92473 lung .e-u 899 to 1195 1 to 302       302/346
(87 %)
7 diff
(98.0 %id)
T93065 lung .e-u 899 to 1141 247 to 5       243/251
(96 %)
0 diff
(100 %id)
T39207 lung .e-u 903 to 1253 1 to 342       342/354
(96 %)
10 diff
(97.2 %id)
T94084 lung .e-u 904 to 1207 304 to 1   fully sequenced,   304/304
(100 %)
8 diff
(97.4 %id)
T94162 lung .e-u 904 to 1253 1 to 359   fully sequenced,   359/359
(100 %)
16 diff
(95.6 %id)
BM999274 lung, Lung Focal Fibrosis .e-u 911 to 1239 347 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 329/329
(100 %)
0 diff
(100 %id)
AA486252 lung .e-u 913 to 1085 1 to 173       173/173
(100 %)
0 diff
(100 %id)
T91496 lung .e-u 923 to 1228 1 to 318   fully sequenced,   318/318
(100 %)
15 diff
(95.3 %id)
T64524 lung .e-u 924 to 1036 1 to 113       113/113
(100 %)
0 diff
(100 %id)
H67037 nose, olfactory epithelium .e-u 927 to 1240 317 to 1     Submitted on the opposite strand 317/317
(100 %)
5 diff
(98.5 %id)
T96577 lung .e-u 929 to 1246 1 to 319   fully sequenced,   319/319
(100 %)
4 diff
(98.8 %id)
T57123 lung .e-u 933 to 1239 310 to 1   fully sequenced,   310/310
(100 %)
2 diff
(99.4 %id)
T92222 lung .e-u 935 to 1186 1 to 253   fully sequenced,   253/253
(100 %)
3 diff
(98.9 %id)
T63715 lung .e-u 960 to 1240 1 to 283   fully sequenced,   283/283
(100 %)
6 diff
(97.9 %id)
BQ030420 lung, Metastatic Chondrosarcoma .e-u 969 to 1253 291 to 10       282/291
(96 %)
0 diff
(100 %id)
N69047 lung .e-u 979 to 1249 274 to 1   fully sequenced,   274/274
(100 %)
3 diff
(99.0 %id)
T57095 lung .e-u 981 to 1250 277 to 6   fully sequenced,   272/277
(98 %)
7 diff
(97.5 %id)
BI015830 lung_tumor .e-u 1005 to 1170 15 to 175       161/176
(91 %)
12 diff
(93.2 %id)
T92454 lung .e-u 1007 to 1204 203 to 1   fully sequenced,   203/203
(100 %)
0 diff
(100 %id)
BM921693 pooled brain, lung, testis .e-u 1042 to 1249 1 to 207   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 207/207
(100 %)
0 diff
(100 %id)
T92189 lung .e-u 1044 to 1204 162 to 1   fully sequenced,   162/162
(100 %)
0 diff
(100 %id)
AI950705 lung, two pooled squamous cell carcinomas .e-u 1045 to 1240 196 to 1       196/196
(100 %)
0 diff
(100 %id)
AW276066 lung, two pooled squamous cell carcinomas .e-u 1045 to 1247 209 to 7       203/209
(97 %)
0 diff
(100 %id)
CA450126 Human Lung Epithelial cells, lung .e-u 1046 to 1239 212 to 19   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 194/194
(100 %)
0 diff
(100 %id)
AW272967 lung, two pooled squamous cell carcinomas .e-u 1047 to 1248 206 to 6       201/206
(97 %)
0 diff
(100 %id)
CA434243 lung, Lung Focal Fibrosis .e-u 1082 to 1253 176 to 6       171/176
(97 %)
0 diff
(100 %id)
T96578 lung .e-u 1089 to 1249 159 to 1   fully sequenced,   159/159
(100 %)
6 diff
(96.3 %id)
N79520 lung .e-u 1104 to 1247 144 to 1   fully sequenced,   144/144
(100 %)
0 diff
(100 %id)
AA634892 lung .e-u 1107 to 1240 1 to 133       133/133
(100 %)
4 diff
(97.0 %id)
BG997848 head_neck .e-u 1115 to 1245 8 to 139       132/139
(94 %)
3 diff
(97.9 %id)
T63871 lung .e-u 1116 to 1211 97 to 1   fully sequenced,   97/97
(100 %)
3 diff
(97.0 %id)
BI011107 lung_normal .f 1 to 476 14 to 487 M2L P45H T113I T154S A155N ... tiling clone,   474/494
(95 %)
14 diff
(97.2 %id)
AW955410   .g 1 to 604 1 to 602 exact tiling clone,   602/602
(100 %)
18 diff
(97.1 %id)
BF105927 lung .g 62 to 655 1 to 585   tiling clone,   585/587
(99 %)
23 diff
(96.1 %id)
BF868355 lung_tumor .h 1 to 381 1 to 381 E2A G4I P18H K36E T86I tiling clone,   381/496
(76 %)
9 diff
(98.2 %id)
BF850987 lung_normal .i-u 1 to 359 10 to 368   tiling clone,   359/368
(97 %)
6 diff
(98.4 %id)
BG538870 lung .i-u 230 to 599 1 to 370   tiling clone,   370/473
(78 %)
1 diff
(99.8 %id)
AA359092 lung .i-u 254 to 559 1 to 307       307/308
(99 %)
5 diff
(98.4 %id)
AA359044 lung .i-u 560 to 845 1 to 289   tiling clone,   289/289
(100 %)
3 diff
(99.0 %id)
AA358145 lung .i-u 720 to 933 1 to 223       223/272
(81 %)
11 diff
(96.0 %id)
BF358274 lung_normal .i-u 723 to 1065 1 to 342   tiling clone,   342/477
(71 %)
4 diff
(99.2 %id)
TI_154019726   .i-u 839 to 1500 752 to 89   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 664/664
(100 %)
2 diff
(99.7 %id)
TI_154091913   .i-u 863 to 1370 615 to 109       507/616
(82 %)
0 diff
(100 %id)
CA438184 lung, Lung Focal Fibrosis .i-u 865 to 1518 656 to 1   tiling clone,   656/661
(99 %)
1 diff
(99.9 %id)
BG537173 lung .i-u 879 to 1387 1 to 508       508/898
(56 %)
11 diff
(98.8 %id)
AI566236 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .i-u 883 to 1353 471 to 1   tiling clone,   471/471
(100 %)
0 diff
(100 %id)
AW510932 pooled .i-u 889 to 1352 464 to 1       464/464
(100 %)
2 diff
(99.6 %id)
CA434478 lung, Lung Focal Fibrosis .i-u 925 to 1368 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
AI187080 lung .i-u 951 to 1352 401 to 1       401/401
(100 %)
2 diff
(99.6 %id)
BF847960 lung_normal .j 1 to 532 531 to 1 C35V V36L G37A S38P K44X ... tiling clone, Submitted on the opposite strand 529/531
(99 %)
6 diff
(98.9 %id)
BG485094 lung .k 1 to 762 1 to 755 exact tiling clone,   755/759
(99 %)
25 diff
(96.8 %id)
AA316970 lung .k 140 to 402 1 to 264       264/264
(100 %)
2 diff
(99.3 %id)
AB439566 lung .k 222 to 684 1 to 463   tiling clone,   463/463
(100 %)
2 diff
(99.6 %id)
BF870953 lung_tumor .l 1 to 341 1 to 341   tiling clone,   341/351
(97 %)
4 diff
(98.9 %id)
BF849841 lung_normal .l 90 to 368 279 to 1   tiling clone, Submitted on the opposite strand 279/392
(71 %)
0 diff
(100 %id)
DA594380 lung .l 338 to 900 2 to 564   tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
BF853576 lung_normal .l 401 to 615 223 to 7     Submitted on the opposite strand 217/224
(96 %)
0 diff
(100 %id)
BI010360 lung_normal .l 424 to 682 259 to 1       259/259
(100 %)
0 diff
(100 %id)
BI010490 lung_normal .l 424 to 682 1 to 260       260/260
(100 %)
7 diff
(97.4 %id)
BI013980 lung_tumor .l 573 to 963 1 to 392       392/392
(100 %)
11 diff
(97.2 %id)
BF884184 lung_tumor .l 667 to 958 40 to 326       287/331
(86 %)
11 diff
(96.7 %id)
BQ329733 lung_normal .l 818 to 1156 357 to 19       339/399
(84 %)
0 diff
(100 %id)
BF875031 lung_tumor .l 829 to 1335 507 to 1   tiling clone, Submitted on the opposite strand 507/507
(100 %)
1 diff
(99.9 %id)
BF881595 lung_tumor .l 831 to 1303 492 to 21     Submitted on the opposite strand 472/493
(95 %)
0 diff
(100 %id)
BF884422 lung_tumor .l 834 to 1210 381 to 5     Submitted on the opposite strand 377/381
(98 %)
0 diff
(100 %id)
BF847054 lung_normal .l 840 to 1099 1 to 259       259/259
(100 %)
11 diff
(95.8 %id)
BF881593 lung_tumor .l 956 to 1425 469 to 1     Submitted on the opposite strand 469/469
(100 %)
4 diff
(99.2 %id)
BF884595 lung_tumor .l 1005 to 1175 182 to 18     Submitted on the opposite strand 165/182
(90 %)
0 diff
(100 %id)
BQ331053 lung_tumor .l 1014 to 1267 54 to 309       256/309
(82 %)
6 diff
(98.1 %id)
BF881590 lung_tumor .l 1068 to 1453 386 to 1     Submitted on the opposite strand 386/386
(100 %)
1 diff
(99.8 %id)
BF880458 lung_tumor .l 1110 to 1490 5 to 379   tiling clone,   375/379
(98 %)
9 diff
(97.7 %id)
BG998896 head_neck .l 1246 to 1368 124 to 1       124/124
(100 %)
8 diff
(93.6 %id)
BI017905 lung_tumor .l 1246 to 1365 121 to 4       118/121
(97 %)
0 diff
(100 %id)
AA316312 lung .l 1410 to 1677 1 to 268 V25X V46F tiling clone,   268/268
(100 %)
2 diff
(99.3 %id)
AB439564 lung .m 1 to 306 1 to 306 exact tiling clone,   306/306
(100 %)
0 diff
(100 %id)
BM996644 lung, Metastatic Chondrosarcoma .m 204 to 701 513 to 16       498/513
(97 %)
0 diff
(100 %id)
AA487833 lung .m 232 to 469 1 to 237   fully sequenced,   237/237
(100 %)
2 diff
(99.2 %id)
AA988129 carcinoid, lung .m 242 to 700 459 to 1   tiling clone,   459/459
(100 %)
0 diff
(100 %id)
AA486594 lung .m 250 to 525 1 to 276   fully sequenced,   276/276
(100 %)
0 diff
(100 %id)
BM992962 lung, Metastatic Chondrosarcoma .m 259 to 698 456 to 17   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 440/440
(100 %)
0 diff
(100 %id)
BM993126 lung, Metastatic Chondrosarcoma .m 260 to 701 457 to 16       442/457
(96 %)
0 diff
(100 %id)
AA775196 lung .m 276 to 695 418 to 2       417/418
(99 %)
0 diff
(100 %id)
T64547 lung .m 321 to 676 1 to 362   fully sequenced,   362/362
(100 %)
18 diff
(95.1 %id)
AI820527 lung .m 330 to 695 1 to 366       366/366
(100 %)
0 diff
(100 %id)
T65725 lung .m 331 to 650 1 to 328       328/384
(85 %)
11 diff
(97.2 %id)
AA669027 lung .m 342 to 693 351 to 1       351/351
(100 %)
1 diff
(99.8 %id)
AI821016 lung .m 346 to 697 1 to 352       352/352
(100 %)
0 diff
(100 %id)
AA975965 carcinoid, lung .m 347 to 695 349 to 1       349/349
(100 %)
1 diff
(99.8 %id)
AA664149 lung .m 348 to 659 312 to 1       312/312
(100 %)
0 diff
(100 %id)
AI821376 lung .m 350 to 694 355 to 11   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 345/345
(100 %)
0 diff
(100 %id)
AA664140 lung .m 358 to 696 339 to 1       339/345
(98 %)
0 diff
(100 %id)
AA486694 lung .m 359 to 697 1 to 339   fully sequenced,   339/339
(100 %)
2 diff
(99.5 %id)
AA953082 pooled .m 360 to 698 339 to 1       339/339
(100 %)
0 diff
(100 %id)
T64453 lung .m 368 to 701 335 to 3       333/335
(99 %)
6 diff
(98.3 %id)
AA668950 lung .m 368 to 694 327 to 1       327/327
(100 %)
8 diff
(97.6 %id)
AA782295 lung .m 377 to 693 317 to 1       317/317
(100 %)
0 diff
(100 %id)
AA486890 lung .m 424 to 696 273 to 1   fully sequenced,   273/273
(100 %)
0 diff
(100 %id)
AA487981 lung .m 439 to 659 221 to 1   fully sequenced,   221/221
(100 %)
0 diff
(100 %id)
AA487035 lung .m 495 to 697 202 to 1   fully sequenced,   202/202
(100 %)
0 diff
(100 %id)
T65970 lung .m 543 to 700 160 to 1   fully sequenced,   160/160
(100 %)
0 diff
(100 %id)
AI732297 lung .m 568 to 1064 496 to 1       496/498
(99 %)
2 diff
(99.6 %id)
T95017 lung .m 667 to 1058 403 to 7       397/407
(97 %)
12 diff
(97.1 %id)
AW204600   .m 696 to 1062 382 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 367/367
(100 %)
0 diff
(100 %id)
BQ331603 lung_tumor .n-u 1 to 290 25 to 321 R2S K3M F4S L5E E6V ... tiling clone,   297/321
(92 %)
6 diff
(98.2 %id)
AK303817 lung, tumor tissue Gene SFTPB, variant not shown         Suspected internal deletion, this clone was ignored    
CD608839   Gene SFTPB, variant not shown         This clone was ignored    
AA663933 lung Gene SFTPB, variant not shown         This clone was ignored    
AA976722 carcinoid, lung Gene SFTPB, variant not shown         This clone was ignored    
BQ016772 lung, Lung Focal Fibrosis Gene SFTPB, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_154011092   Gene SFTPB, variant not shown       AAA This clone was ignored    
DC413419 lung, tumor tissue Gene SFTPB, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i-u, .j, .k, .l, .m, .n-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI