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Gene SETBP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
185 supporting clones for gene SETBP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB007897 brain .a 1 to 6197 1 to 6197 V1101I tiling clone, available from KIAA,   6197/6197
(100 %)
2 diff
(100.0 %id)
BC146776 Clones donated by Kazusa DNA Research Inst. .a 1 to 6197 1 to 6197 V1101I AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 6197/6197
(100 %)
2 diff
(100.0 %id)
NM_015559.2   .a 1 to 9899 1 to 9899 exact RefSeq,   9899/9899
(100 %)
0 diff
(100 %id)
AW604804 colon .a 127 to 505 83 to 460       378/384
(98 %)
6 diff
(98.5 %id)
BF959575 nervous_normal .a 162 to 695 5 to 538       534/538
(99 %)
6 diff
(98.9 %id)
BF962829 nervous_normal .a 162 to 678 5 to 521       517/521
(99 %)
6 diff
(98.9 %id)
AW501690 lymph .a 256 to 682 8 to 433       426/433
(98 %)
6 diff
(98.7 %id)
AW501714 lymph .a 256 to 551 8 to 303       296/303
(97 %)
10 diff
(96.7 %id)
TI_154156804   .a 256 to 765 83 to 592       510/512
(99 %)
15 diff
(97.1 %id)
TI_154156829   .a 256 to 768 80 to 593       514/516
(99 %)
22 diff
(95.8 %id)
BF961909 nervous_normal .a 273 to 723 467 to 18       450/467
(96 %)
0 diff
(100 %id)
TI_1948225126   .a 292 to 735 120 to 562       443/465
(95 %)
6 diff
(98.8 %id)
TI_1948225445   .a 292 to 723 123 to 554       432/794
(54 %)
9 diff
(98.9 %id)
EL736150 mixed .a 297 to 782 1 to 486       486/640
(75 %)
4 diff
(99.4 %id)
DR002791 fetal brain .a 387 to 782 1 to 395       395/514
(76 %)
6 diff
(98.9 %id)
AB022660   .a 454 to 6197 1 to 5744       5744/5744
(100 %)
4 diff
(100.0 %id)
DB062006 testis .a 926 to 1482 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB082324 testis .a 926 to 1495 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BP345801 synovial membrane .a 1121 to 1701 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
FN077859 breast carcinoma .a 1388 to 1490 100 to 1     Submitted on the opposite strand 100/100
(100 %)
5 diff
(95.0 %id)
BM174948 hippocampus .a 1435 to 1878 14 to 457       444/457
(97 %)
6 diff
(98.7 %id)
AW880366 ovary .a 1495 to 1860 32 to 396       365/396
(92 %)
6 diff
(98.5 %id)
BG982745 colon_normal .a 1660 to 2133 21 to 488       468/496
(94 %)
9 diff
(98.2 %id)
BQ707217 Spleen .a 1972 to 2874 13 to 915       903/915
(98 %)
6 diff
(99.4 %id)
BG987514 head_neck .a 2300 to 2705 405 to 2       404/405
(99 %)
0 diff
(100 %id)
BF374838 stomach .a 2872 to 3055 188 to 4       185/194
(95 %)
0 diff
(100 %id)
CV350396 stomach .a 2892 to 2991 10 to 110       101/115
(87 %)
6 diff
(94.8 %id)
DA810100 brain .a 3031 to 3584 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
AL042639 testis .a 3122 to 3792 1 to 673   tiling clone,   673/673
(100 %)
3 diff
(99.6 %id)
BE836112 prostate_normal .a 3134 to 3525 420 to 29       392/425
(92 %)
0 diff
(100 %id)
BE836118 prostate_normal .a 3134 to 3525 400 to 9       392/404
(97 %)
0 diff
(100 %id)
BE836113 prostate_normal .a 3271 to 3525 1 to 255       255/264
(96 %)
5 diff
(98.2 %id)
DA778780 brain .a 3613 to 3978 209 to 574   capped   366/573
(63 %)
6 diff
(99.0 %id)
R17655 whole brain .a 3652 to 3954 1 to 307       307/312
(98 %)
15 diff
(95.2 %id)
DA766081 tongue .a 3656 to 4226 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
FN097980 breast carcinoma .a 3803 to 3890 1 to 86       86/89
(96 %)
3 diff
(96.7 %id)
BE835621 prostate_normal .a 3807 to 4185 388 to 10       379/388
(97 %)
0 diff
(100 %id)
CN307921 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 3884 to 4170 1 to 287       287/287
(100 %)
1 diff
(99.7 %id)
BQ641251 eye, normal pigmented retinal epithelium .a 3906 to 4774 1 to 871   tiling clone,   871/925
(94 %)
6 diff
(99.4 %id)
BY800354 eye .a 3920 to 4536 1 to 617       617/617
(100 %)
0 diff
(100 %id)
BI768199 pooled lung and spleen .a 4504 to 4819 1 to 316       316/316
(100 %)
0 diff
(100 %id)
TI_57180650   .a 4504 to 4819 37 to 352       316/352
(89 %)
6 diff
(98.3 %id)
CD172259 White Matter .a 4558 to 5375 1 to 822       822/872
(94 %)
9 diff
(99.0 %id)
CN307922 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4578 to 4856 1 to 279       279/279
(100 %)
6 diff
(97.9 %id)
BM700691 eye, eye anterior segment .a 5275 to 5648 9 to 382     Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 374/382
(97 %)
6 diff
(98.5 %id)
BX281347 pooled .a 5366 to 5848 1 to 483       483/483
(100 %)
0 diff
(100 %id)
AW188167 pooled .a 5371 to 5543 173 to 1       173/173
(100 %)
0 diff
(100 %id)
FN111408 breast carcinoma .a 5431 to 5548 121 to 1     Submitted on the opposite strand 121/121
(100 %)
4 diff
(96.7 %id)
C17380 placenta .a 5501 to 5742 1 to 241       241/241
(100 %)
3 diff
(98.8 %id)
AA953508 pooled .a 5533 to 5869 339 to 4       336/339
(99 %)
0 diff
(100 %id)
AA936357 pooled .a 5544 to 5868 330 to 5       326/330
(98 %)
0 diff
(100 %id)
BE704298 nervous_normal .a 5593 to 5605 282 to 294       294/294
(100 %)
8 diff
(97.3 %id)
CF994040 Human Placenta, placenta .a 5634 to 6309 22 to 697       676/745
(90 %)
13 diff
(98.3 %id)
CF994026 Human Placenta, placenta .a 5634 to 6276 22 to 670       649/941
(68 %)
11 diff
(98.9 %id)
BU728417 eye, eye anterior segment .a 5653 to 6197 562 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 544/544
(100 %)
4 diff
(99.3 %id)
BI497383 cochlea, ear .a 5654 to 5874 1 to 221   AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 221/221
(100 %)
5 diff
(97.8 %id)
FN062921 breast carcinoma .a 5683 to 5778 96 to 1     Submitted on the opposite strand 96/96
(100 %)
0 diff
(100 %id)
BP384261 pancreatic islet .a 5706 to 6203 1 to 499     Submitted on the opposite strand 499/499
(100 %)
1 diff
(99.8 %id)
TI_154133674   .a 5719 to 6197 576 to 95   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 482/1073
(44 %)
20 diff
(98.2 %id)
U55979 eye .a 5734 to 6204 473 to 1       473/473
(100 %)
8 diff
(98.4 %id)
AW117318 pooled .a 5751 to 6196 446 to 1       446/446
(100 %)
0 diff
(100 %id)
AW575898 lymph .a 5751 to 6214 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
AI382219 B-cell, chronic lymphotic leukemia .a 5753 to 6198 446 to 1       446/446
(100 %)
2 diff
(99.6 %id)
AW090561 brain, tumor, 5 pooled (see description) .a 5767 to 6199 434 to 1       434/434
(100 %)
1 diff
(99.8 %id)
R43373 whole brain .a 5837 to 6204 368 to 1       368/368
(100 %)
2 diff
(99.5 %id)
BI495337 cochlea, ear .a 5873 to 6214 342 to 1       342/349
(97 %)
1 diff
(99.8 %id)
CN393109 embryonic stem cells, DMSO-treated H9 cellline .a 5889 to 6613 1 to 725   tiling clone,   725/725
(100 %)
0 diff
(100 %id)
AW575903 lymph .a 5899 to 6214 316 to 1       316/316
(100 %)
0 diff
(100 %id)
DB287428 uterus .a 5957 to 6515 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
AW058544 Kidney .a 6160 to 6596 439 to 3       437/439
(99 %)
0 diff
(100 %id)
AW237340 Kidney .a 6160 to 6596 439 to 3       437/439
(99 %)
0 diff
(100 %id)
AW237402 Kidney .a 6175 to 6594 424 to 5       420/424
(99 %)
0 diff
(100 %id)
AL832945 stomach .a 6220 to 9897 1 to 3677   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 3677/3677
(100 %)
2 diff
(100.0 %id)
DA718561   .a 6237 to 6791 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA522349 brain .a 6460 to 7020 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA522351 brain .a 6460 to 7019 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB072999 testis .a 6484 to 7024 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA809685 brain .a 6494 to 7050 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA340421 hippocampus .a 6517 to 7092 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA530211 brain .a 6642 to 7251 2 to 611   capped   610/610
(100 %)
0 diff
(100 %id)
CN393110 embryonic stem cells, cell lines H1, H7, andH9 .a 6736 to 7149 1 to 414       414/414
(100 %)
0 diff
(100 %id)
BE154886 head_neck .a 7088 to 7203 9 to 124       116/124
(93 %)
6 diff
(95.2 %id)
BE148433 head_neck .a 7185 to 7633 1 to 459       459/459
(100 %)
27 diff
(94.2 %id)
DB254423 uterus .a 7347 to 7899 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
BF741522 bocio_tumor .a 7366 to 7723 355 to 1     Submitted on the opposite strand 355/355
(100 %)
4 diff
(98.9 %id)
BG002045 placenta_normal .a 7440 to 7625 1 to 186       186/186
(100 %)
1 diff
(99.5 %id)
DA163593 amygdala .a 7573 to 8158 2 to 589   capped   588/588
(100 %)
3 diff
(99.5 %id)
BE769833 prostate_tumor .a 7651 to 7970 412 to 93       320/420
(76 %)
0 diff
(100 %id)
BF372490 prostate_tumor .a 7651 to 8103 16 to 467   tiling clone,   452/467
(96 %)
6 diff
(98.8 %id)
BF372489 prostate_tumor .a 7653 to 8106 1 to 451       451/455
(99 %)
11 diff
(97.6 %id)
BG001932 placenta_normal .a 7762 to 7873 115 to 4       112/115
(97 %)
0 diff
(100 %id)
AK123972   .a 7827 to 9897 1 to 2071   tiling clone, available from FLJ,   2071/2071
(100 %)
4 diff
(99.9 %id)
DA908342   .a 7828 to 8382 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DB267741 uterus .a 7837 to 8386 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB317289 brain .a 9361 to 9897 541 to 1       541/541
(100 %)
4 diff
(99.3 %id)
CF143191 lymph .b 1 to 335 1 to 336   tiling clone,   336/356
(94 %)
15 diff
(95.8 %id)
TI_154174497   .b 8 to 484 81 to 562       482/777
(62 %)
34 diff
(95.7 %id)
BC062338 Brain, neuroblastoma .b 110 to 1893 1 to 1784 exact tiling clone, available from MGC, AAA   1784/1784
(100 %)
1 diff
(100.0 %id)
NM_001130110.1   .b 110 to 1893 1 to 1784 exact RefSeq, AAA   1784/1784
(100 %)
0 diff
(100 %id)
BQ948931 brain, neuroblastoma, cell line .b 111 to 931 1 to 826   available from MGC,   826/848
(97 %)
15 diff
(98.3 %id)
TI_1948224797   .b 497 to 1232 866 to 128       739/1329
(55 %)
8 diff
(99.4 %id)
TI_1948224491   .b 500 to 1234 122 to 856 K202I Q203A C215W R217P N218E ...     735/1459
(50 %)
20 diff
(98.7 %id)
TI_1948225128   .b 914 to 1232 444 to 126       319/346
(92 %)
0 diff
(100 %id)
DA746518   .c-u 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
AW206353   .c-u 183 to 648 1 to 466     Submitted on the opposite strand 466/466
(100 %)
2 diff
(99.6 %id)
BQ130525 insulinoma, Pancreas .c-u 183 to 642 1 to 460     Submitted on the opposite strand 460/460
(100 %)
2 diff
(99.6 %id)
CB410145 maxilla, pooled .c-u 184 to 797 27 to 640     Submitted on the opposite strand 614/640
(95 %)
6 diff
(99.1 %id)
CB217817 mandible, pooled .c-u 185 to 743 21 to 579     Submitted on the opposite strand 559/579
(96 %)
6 diff
(99.0 %id)
AA714677 germinal center B cell .c-u 191 to 539 1 to 349     Submitted on the opposite strand 349/349
(100 %)
0 diff
(100 %id)
BM874071   .c-u 199 to 616 1 to 418     Submitted on the opposite strand 418/418
(100 %)
2 diff
(99.6 %id)
AI244751 Kidney .c-u 201 to 594 1 to 394     Submitted on the opposite strand 394/394
(100 %)
4 diff
(99.0 %id)
CK905858 insulinoma, Pancreas .c-u 244 to 690 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
BQ272271 insulinoma, Pancreas .c-u 244 to 784 1 to 541     Submitted on the opposite strand 541/541
(100 %)
0 diff
(100 %id)
AA747324 germinal center B cell .c-u 253 to 796 1 to 544   tiling clone, Submitted on the opposite strand 544/544
(100 %)
1 diff
(99.9 %id)
BI757415 brain .c-u 430 to 1214 1 to 792       792/799
(99 %)
11 diff
(98.7 %id)
TI_57220371   .c-u 430 to 1214 33 to 824       792/831
(95 %)
11 diff
(98.7 %id)
CB410146 maxilla, pooled .c-u 535 to 1090 556 to 1     Submitted on the opposite strand 556/556
(100 %)
2 diff
(99.7 %id)
CB217862.
matches multiple genes
mandible, pooled .c-u 535 to 1090 556 to 1     Submitted on the opposite strand, also hits gene WAPAL 556/556
(100 %)
1 diff
(99.9 %id)
T17028   .c-u 545 to 941 1 to 398       398/398
(100 %)
4 diff
(99.0 %id)
F12606 brain, total brain .c-u 546 to 837 1 to 292       292/292
(100 %)
0 diff
(100 %id)
AL138155 brain .c-u 551 to 1077 1 to 528       528/528
(100 %)
1 diff
(99.9 %id)
T74019 whole brain .c-u 564 to 913 1 to 354       354/356
(99 %)
4 diff
(98.9 %id)
DN996435 breast cancer, Mammary gland (cancer tissue) .c-u 570 to 1186 8 to 624   tiling clone,   617/624
(98 %)
6 diff
(99.1 %id)
BM874700   .c-u 599 to 1064 466 to 1     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
FN121484 breast carcinoma .c-u 676 to 747 72 to 1     Submitted on the opposite strand 72/72
(100 %)
2 diff
(97.3 %id)
FN141339 breast carcinoma .c-u 838 to 951 116 to 2     Submitted on the opposite strand 115/116
(99 %)
0 diff
(100 %id)
AA329512   .c-u 867 to 1173 1 to 313       313/317
(98 %)
10 diff
(96.9 %id)
BF574359 muscle (skeletal) .c-u 911 to 1554 1 to 645 exact     645/648
(99 %)
12 diff
(98.2 %id)
AI703484 carcinoid, lung .c-u 973 to 1461 1 to 489     Submitted on the opposite strand 489/490
(99 %)
4 diff
(99.2 %id)
AA121566 lung, lung carcinoma .c-u 1025 to 1457 1 to 444       444/444
(100 %)
11 diff
(97.6 %id)
BQ267658 insulinoma, Pancreas .c-u 1093 to 1564 473 to 3 exact   Submitted on the opposite strand 471/473
(99 %)
0 diff
(100 %id)
BQ130777 insulinoma, Pancreas .c-u 1094 to 1564 472 to 3 exact   Submitted on the opposite strand 470/472
(99 %)
0 diff
(100 %id)
DB236070 trachea .c-u 1112 to 1609 2 to 499 E7K tiling clone, fully sequenced, capped   498/498
(100 %)
1 diff
(99.8 %id)
TI_154103462   .c-u 1192 to 2022 913 to 82   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 832/993
(83 %)
24 diff
(97.6 %id)
BE646434 B-cell, chronic lymphotic leukemia .c-u 1241 to 1778 536 to 1       536/536
(100 %)
5 diff
(99.1 %id)
AA934379 pooled .c-u 1317 to 1787 472 to 1       472/472
(100 %)
3 diff
(99.4 %id)
BG926094 cartilage .c-u 1331 to 1910 86 to 665       580/597
(97 %)
6 diff
(99.0 %id)
BM873633   .c-u 1408 to 1935 1 to 526       526/526
(100 %)
4 diff
(99.3 %id)
AA758483 liver and spleen .c-u 1412 to 1537 125 to 1       125/125
(100 %)
1 diff
(99.2 %id)
AA970371 pooled .c-u 1428 to 1785 358 to 1       358/358
(100 %)
0 diff
(100 %id)
BF739885 Kidney .c-u 1458 to 2022 572 to 1       572/572
(100 %)
7 diff
(98.8 %id)
AI702209 carcinoid, lung .c-u 1472 to 1925 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
AI590093 anaplastic oligodendroglioma, brain .c-u 1478 to 2024 554 to 8   tiling clone,   547/554
(98 %)
0 diff
(100 %id)
FN170490 breast carcinoma .c-u 1498 to 1602 1 to 105       105/105
(100 %)
0 diff
(100 %id)
BF197593 Kidney .c-u 1506 to 2022 517 to 1       517/517
(100 %)
0 diff
(100 %id)
AA334939   .c-u 1516 to 1869 1 to 355       355/355
(100 %)
2 diff
(99.5 %id)
AW301264 Kidney .c-u 1520 to 1962 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AW965503   .c-u 1550 to 2022 1 to 473       473/585
(80 %)
7 diff
(98.9 %id)
BE350609 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c-u 1557 to 1834 279 to 1       279/279
(100 %)
1 diff
(99.7 %id)
AA121706 lung, lung carcinoma .c-u 1569 to 1834 270 to 1       270/270
(100 %)
6 diff
(97.8 %id)
DB350307 trachea .c-u 1579 to 2022 445 to 1   fully sequenced,   445/445
(100 %)
1 diff
(99.8 %id)
AI190232 heart .c-u 1582 to 2024 443 to 1       443/443
(100 %)
0 diff
(100 %id)
FN090438 breast carcinoma .c-u 1586 to 1712 124 to 1     Submitted on the opposite strand 124/124
(100 %)
3 diff
(97.6 %id)
BE221729 Kidney .c-u 1586 to 2022 452 to 16   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 437/437
(100 %)
0 diff
(100 %id)
AI694630 carcinoid, lung .c-u 1604 to 2009 1 to 407     Submitted on the opposite strand 407/407
(100 %)
15 diff
(96.4 %id)
AI002577 Kidney, kidney tumor .c-u 1620 to 1834 215 to 1       215/215
(100 %)
1 diff
(99.6 %id)
FN048709 breast carcinoma .c-u 1629 to 1716 1 to 88       88/91
(96 %)
1 diff
(99.0 %id)
AA768004 germinal center B cell .c-u 1663 to 1834 172 to 1       172/172
(100 %)
0 diff
(100 %id)
CF137545 lymph .c-u 1692 to 2022 8 to 338   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 331/338
(97 %)
6 diff
(98.3 %id)
TI_154167074   .c-u 1692 to 2022 87 to 417   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 331/331
(100 %)
1 diff
(99.7 %id)
AI356994 lymph node, lymphoma, follicular mixed small and largecell .c-u 1695 to 1834 140 to 1       140/140
(100 %)
0 diff
(100 %id)
AI824433 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c-u 1725 to 1834 110 to 1       110/110
(100 %)
0 diff
(100 %id)
FN049720 breast carcinoma .c-u 1746 to 1845 1 to 100       100/100
(100 %)
0 diff
(100 %id)
BE857685 Prostate .c-u 1779 to 2024 251 to 6       246/251
(98 %)
0 diff
(100 %id)
AI193348 lung .c-u 1781 to 2024 245 to 2       244/245
(99 %)
0 diff
(100 %id)
BF222437 Kidney .c-u 1804 to 2023 221 to 1       221/221
(100 %)
2 diff
(99.1 %id)
BX105381 whole brain .c-u 1812 to 2021 224 to 15   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base) 210/210
(100 %)
3 diff
(98.6 %id)
AW131125 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c-u 1849 to 2021 173 to 1       173/173
(100 %)
0 diff
(100 %id)
AW131184 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c-u 1849 to 2021 173 to 1       173/173
(100 %)
4 diff
(97.7 %id)
AW771220 Kidney .c-u 1890 to 2037 156 to 10   tiling clone,   147/156
(94 %)
0 diff
(100 %id)
AU117097 whole embryo, mainly head .d-u 1 to 778 2 to 786 V54D tiling clone, fully sequenced, capped   785/785
(100 %)
17 diff
(97.9 %id)
AW896003 nervous_normal .d-u 290 to 626 339 to 3   tiling clone,   337/339
(99 %)
0 diff
(100 %id)
BF361887 nervous_normal .d-u 370 to 610 11 to 247       237/250
(94 %)
8 diff
(96.8 %id)
BQ341006 nervous_normal .d-u 396 to 626 1 to 234       234/241
(97 %)
17 diff
(93.0 %id)
BX096302 carcinoid, lung .d-u 556 to 1037 1 to 482   tiling clone,   482/482
(100 %)
0 diff
(100 %id)
AU144017 whole embryo, mainly head .d-u 771 to 1345 575 to 1   fully sequenced,   575/575
(100 %)
16 diff
(97.3 %id)
FN146159 breast carcinoma .d-u 801 to 882 1 to 82       82/87
(94 %)
1 diff
(98.9 %id)
BE671251 carcinoid, lung .d-u 820 to 1352 533 to 1   tiling clone,   533/533
(100 %)
0 diff
(100 %id)
AA830612 germinal center B cell .d-u 893 to 1357 465 to 1   tiling clone,   465/465
(100 %)
8 diff
(98.3 %id)
AI680945 carcinoid, lung .d-u 978 to 1348 371 to 1       371/371
(100 %)
1 diff
(99.8 %id)
AA564018 colon, tumor .d-u 1006 to 1345 356 to 17   AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 340/340
(100 %)
1 diff
(99.8 %id)
BE973666 Prostate .e 1 to 762 1 to 762 E2S S3P R4G E5N T6L ... tiling clone,   762/766
(99 %)
36 diff
(95.4 %id)
BQ313985 breast_normal .f-u 1 to 407 412 to 7 exact tiling clone,   406/417
(97 %)
0 diff
(100 %id)
AK091663 brain Gene SETBP1, variant not shown       available from FLJ,      
BF858767 prostate_tumor Gene SETBP1, variant not shown         Submitted on the opposite strand    
BF910141 uterus_tumor Gene SETBP1, variant not shown         Submitted on the opposite strand    
DB317187 brain Gene SETBP1, variant not shown              
DA520460 brain Gene SETBP1, variant not shown       capped      
BY795376 eye Gene SETBP1, variant not shown         Suspected internal deletion, this clone was ignored    
BF431675 Kidney Gene SETBP1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand, submitted on the opposite strand    
BF681698 Prostate Gene SETBP1, variant not shown       AAA      
BG433843 Kidney Gene SETBP1, variant not shown         Suspected internal deletion, this clone was ignored    
DB079990 testis Gene SETBP1, variant not shown       capped      
DB340770 testis Gene SETBP1, variant not shown              
DB275720 uterus Gene SETBP1, variant not shown       capped      
DB352152 uterus Gene SETBP1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d-u, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI