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Gene SERP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
572 representative clones for gene SERP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK093929 trachea .a 1 to 2984 5 to 2987 P19L tiling clone, available from FLJ,   2987/2994
(99 %)
8 diff
(99.8 %id)
DB204543 trachea .a 1 to 554 5 to 558 P19L capped   557/557
(100 %)
2 diff
(99.7 %id)
DA569863 whole embryo, mainly head .a 1080 to 1938 2 to 850   capped   849/849
(100 %)
20 diff
(97.7 %id)
BM710718 eye, fetal eyes .a 1589 to 2090 1 to 502       502/502
(100 %)
1 diff
(99.9 %id)
W20448 lung .a 1646 to 2049 1 to 410       410/505
(81 %)
8 diff
(98.5 %id)
BQ221001 melanotic melanoma, skin .a 1673 to 2530 1 to 864   tiling clone,   864/868
(99 %)
14 diff
(98.4 %id)
BE874197 large cell carcinoma, undifferentiated, lung .a 1853 to 2544 1 to 674       674/881
(76 %)
23 diff
(97.4 %id)
CD367899 Alveolar Macrophage, lung .a 1875 to 2484 625 to 16   AAA   610/610
(100 %)
1 diff
(99.9 %id)
BQ217138 embryonal carcinoma, cell line, testis .a 1916 to 2672 1 to 768       768/777
(98 %)
17 diff
(97.9 %id)
BG569676 Liver .a 1925 to 2628 1 to 706       706/713
(99 %)
4 diff
(99.5 %id)
BQ007666 Chondrosarcoma, Left Pelvis .a 1948 to 2484 555 to 19   AAA   537/537
(100 %)
2 diff
(99.7 %id)
BG562705 Liver .a 1955 to 2754 1 to 796       796/797
(99 %)
40 diff
(95.0 %id)
BQ271974 Pancreas, Purified pancreatic islet .a 1972 to 2533 1 to 564       564/564
(100 %)
1 diff
(99.9 %id)
BG529635 embryonal carcinoma, testis .a 1976 to 2755 1 to 790       790/795
(99 %)
28 diff
(96.5 %id)
DN919018   .a 1979 to 2583 1 to 605       605/605
(100 %)
0 diff
(100 %id)
DN916936   .a 1980 to 2595 1 to 616       616/616
(100 %)
8 diff
(98.8 %id)
AI831234 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1992 to 2489 500 to 1       500/500
(100 %)
2 diff
(99.6 %id)
CA867767 Pancreas, Purified pancreatic islet .a 1992 to 2580 67 to 657       591/657
(89 %)
6 diff
(99.1 %id)
CN255991 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2019 to 2661 9 to 651       643/651
(98 %)
6 diff
(99.1 %id)
DB571436 hypothalamus .a 2024 to 2489 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
BM542615 embryonal carcinoma, cell line, testis .a 2024 to 2587 1 to 567       567/1221
(46 %)
13 diff
(99.0 %id)
BQ007687 Chondrosarcoma, Left Pelvis .a 2035 to 2803 785 to 19   AAA   767/767
(100 %)
2 diff
(99.8 %id)
DT217259 brain .a 2042 to 2767 1 to 726       726/726
(100 %)
0 diff
(100 %id)
TI_149310803   .a 2042 to 2982 1034 to 101   AAA   934/961
(97 %)
16 diff
(98.4 %id)
DB553196 hypothalamus .a 2058 to 2489 1 to 433     Submitted on the opposite strand 433/433
(100 %)
2 diff
(99.6 %id)
BM752432 Ascites, stomach .a 2083 to 2484 1 to 402   AAA   402/402
(100 %)
1 diff
(99.8 %id)
AI291432 placenta .a 2101 to 2487 388 to 2       387/388
(99 %)
0 diff
(100 %id)
BE176090 head_neck .a 2106 to 2607 1 to 499       499/499
(100 %)
10 diff
(98.0 %id)
AI291434 placenta .a 2117 to 2487 371 to 1       371/371
(100 %)
1 diff
(99.8 %id)
TI_154093431   .a 2131 to 2988 951 to 103   AAA   849/993
(85 %)
18 diff
(98.2 %id)
BF857740 prostate_tumor .a 2144 to 2632 1 to 489       489/489
(100 %)
1 diff
(99.8 %id)
BU736331 eye, fetal eyes .a 2200 to 2490 309 to 19   AAA   291/291
(100 %)
4 diff
(98.7 %id)
BU567327 testis .a 2222 to 2982 1 to 760       760/764
(99 %)
10 diff
(98.7 %id)
BE161781 head_neck .a 2235 to 2735 1 to 500       500/500
(100 %)
4 diff
(99.2 %id)
BF115816 fibrotheoma, ovary .a 2260 to 2790 1 to 531     Submitted on the opposite strand 531/531
(100 %)
1 diff
(99.9 %id)
H14446 breast .a 2261 to 2622 1 to 369       369/371
(99 %)
10 diff
(97.4 %id)
BE675857 B-cell, chronic lymphotic leukemia .a 2271 to 2803 544 to 12   AAA   533/533
(100 %)
1 diff
(99.9 %id)
AA887132 pooled germ cell tumors .a 2301 to 2803 516 to 14   AAA   503/503
(100 %)
0 diff
(100 %id)
TI_149291000   .a 2307 to 2982 766 to 91   AAA   676/704
(96 %)
3 diff
(99.6 %id)
BE858766 brain, glioblastoma (pooled) .a 2318 to 2803 486 to 1       486/486
(100 %)
2 diff
(99.6 %id)
AW129563 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2325 to 2803 490 to 11   AAA   480/480
(100 %)
1 diff
(99.8 %id)
AW571469 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2336 to 2804 477 to 9       469/477
(98 %)
0 diff
(100 %id)
AI985128 Kidney .a 2387 to 2803 430 to 14   AAA   417/417
(100 %)
0 diff
(100 %id)
TI_57189560   .a 2400 to 2980 55 to 636       582/746
(78 %)
11 diff
(98.6 %id)
GD142610   .a 2403 to 2484 1 to 82   AAA   82/82
(100 %)
2 diff
(97.6 %id)
DN916935   .a 2414 to 2983 574 to 7       568/574
(98 %)
0 diff
(100 %id)
BF908004 uterus_tumor .a 2420 to 2954 532 to 1     Submitted on the opposite strand 532/532
(100 %)
7 diff
(98.7 %id)
BF908002 uterus_tumor .a 2422 to 2954 534 to 3     Submitted on the opposite strand 532/535
(99 %)
0 diff
(100 %id)
AI499444 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 2428 to 2803 394 to 19   AAA   376/376
(100 %)
3 diff
(99.3 %id)
FN057859 breast carcinoma .a 2430 to 2533 1 to 101       101/102
(99 %)
6 diff
(94.2 %id)
BF907982 uterus_tumor .a 2431 to 2955 528 to 3     Submitted on the opposite strand 526/528
(99 %)
0 diff
(100 %id)
DB356572 whole embryo, mainly head .a 2438 to 2988 547 to 1   tiling clone,   547/568
(96 %)
11 diff
(98.1 %id)
AI866143 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2438 to 2803 395 to 30   AAA   366/366
(100 %)
0 diff
(100 %id)
DB348531 trachea .a 2446 to 2984 547 to 8       540/547
(98 %)
0 diff
(100 %id)
BF110039 carcinoid, lung .a 2464 to 2984 528 to 8       521/528
(98 %)
0 diff
(100 %id)
BF908001 uterus_tumor .a 2471 to 2954 507 to 22     Submitted on the opposite strand 486/507
(95 %)
0 diff
(100 %id)
BM838905 Ascites, stomach .a 2472 to 2963 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
BE467853 carcinoid, lung .a 2479 to 2984 508 to 3       506/508
(99 %)
0 diff
(100 %id)
BF878355 lung_tumor .a 2514 to 2955 444 to 1     Submitted on the opposite strand 444/444
(100 %)
13 diff
(97.1 %id)
N91117 lung .a 2519 to 2936 415 to 1       415/415
(100 %)
5 diff
(98.8 %id)
BU182558 melanotic melanoma, skin .a 2520 to 2803 1 to 284   AAA   284/284
(100 %)
0 diff
(100 %id)
CN255994 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2521 to 2724 204 to 1     Submitted on the opposite strand 204/204
(100 %)
2 diff
(99.1 %id)
BE707218 head_neck .a 2528 to 2744 223 to 7       217/223
(97 %)
0 diff
(100 %id)
AI383924 B-cell, chronic lymphotic leukemia .a 2573 to 2804 235 to 3       233/235
(99 %)
0 diff
(100 %id)
DB548451 hippocampus .a 2575 to 2982 1 to 408   AAA Submitted on the opposite strand 408/408
(100 %)
1 diff
(99.8 %id)
AI383663   .a 2590 to 2798 226 to 18       209/226
(92 %)
0 diff
(100 %id)
FN102336 breast carcinoma .a 2623 to 2721 97 to 1     Submitted on the opposite strand 97/103
(94 %)
1 diff
(99.1 %id)
FN122097 breast carcinoma .a 2634 to 2717 1 to 84       84/96
(87 %)
2 diff
(98.0 %id)
FN099168 breast carcinoma .a 2636 to 2711 77 to 1     Submitted on the opposite strand 77/78
(98 %)
2 diff
(97.5 %id)
FN086064 breast carcinoma .a 2657 to 2709 1 to 53       53/54
(98 %)
1 diff
(98.2 %id)
FN165417 breast carcinoma .a 2678 to 2769 90 to 1     Submitted on the opposite strand 90/90
(100 %)
3 diff
(96.7 %id)
BE176289 head_neck .a 2735 to 2966 234 to 3     Submitted on the opposite strand 232/244
(95 %)
0 diff
(100 %id)
F00444 leg muscle, skeletal muscle .a 2747 to 2960 214 to 1       214/214
(100 %)
2 diff
(99.1 %id)
FN062193 breast carcinoma .a 2750 to 2850 1 to 101       101/101
(100 %)
1 diff
(99.1 %id)
FN107217 breast carcinoma .a 2806 to 2891 88 to 5     Submitted on the opposite strand 84/104
(80 %)
0 diff
(100 %id)
FN155415 breast carcinoma .a 2814 to 2925 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
FN172376 breast carcinoma .a 2824 to 2934 1 to 107       107/108
(99 %)
6 diff
(94.5 %id)
AI687813 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2848 to 2984 138 to 2       137/138
(99 %)
0 diff
(100 %id)
DA794536 brain .b 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
DA235755 brain .b 14 to 594 2 to 582 exact tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
BI753375 brain .c 1 to 627 6 to 630 F29L A30Q I31F Y32I P33H ... tiling clone,   630/630
(100 %)
2 diff
(99.7 %id)
TI_57218216   .c 1 to 627 38 to 662 F29L A30Q I31F Y32I P33H ...     630/662
(95 %)
6 diff
(99.1 %id)
DB232738 trachea .d-u 1 to 542 2 to 543 P19L tiling clone, capped   542/542
(100 %)
2 diff
(99.7 %id)
DB274603 uterus .d-u 20 to 583 2 to 565 P19L capped   564/564
(100 %)
2 diff
(99.7 %id)
DB459268 testis .d-u 24 to 675 1 to 652 exact     652/653
(99 %)
6 diff
(99.1 %id)
DB216769 trachea .d-u 24 to 534 2 to 512 A18S capped   511/511
(100 %)
3 diff
(99.5 %id)
DB248881 uterus .d-u 25 to 524 2 to 501 exact capped   500/500
(100 %)
1 diff
(99.8 %id)
DA410831 thalamus .d-u 26 to 655 2 to 632 exact capped   631/631
(100 %)
1 diff
(99.9 %id)
DB113498 thymus .d-u 51 to 626 2 to 577 exact capped   576/576
(100 %)
2 diff
(99.7 %id)
CR990561 T-Lymphocytes .d-u 68 to 659 1 to 592 P19L     592/592
(100 %)
2 diff
(99.7 %id)
DA101103 cerebellum .d-u 110 to 668 2 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
H85075 eye, retina .e-u -11 to 386 1 to 412 L84A S85F P86S E87W R88K ... tiling clone, fully sequenced,   412/412
(100 %)
12 diff
(97.1 %id)
H85066 eye, retina .e-u 356 to 675 328 to 1   tiling clone, fully sequenced,   328/328
(100 %)
13 diff
(96.1 %id)
CR619772 Placenta Cot 25-normalized .f 1 to 1552 1 to 1552 exact tiling clone,   1552/1552
(100 %)
0 diff
(100 %id)
BX358891 Placenta Cot 25-normalized .f 1 to 712 1 to 710 S25A fully sequenced,   710/710
(100 %)
8 diff
(98.9 %id)
CN257056 embryonic stem cells, cell lines H1, H7, andH9 .f 26 to 229 1 to 202       202/202
(100 %)
3 diff
(98.6 %id)
BG431132 Kidney .f 48 to 823 1 to 769 exact     769/770
(99 %)
23 diff
(97.1 %id)
AB371435   .f 51 to 448 1 to 398 exact     398/398
(100 %)
0 diff
(100 %id)
BI763273 pooled colon, kidney, stomach .f 56 to 829 1 to 775 R55G E56G E57G T58D P59S ...     775/775
(100 %)
7 diff
(99.1 %id)
TI_57150105   .f 56 to 829 32 to 806 R55G E56G E57G T58D P59S ...     775/806
(96 %)
10 diff
(98.8 %id)
BG755542 B-cells, primary B-cells from tonsils (cell line) .f 61 to 814 1 to 749 exact     749/752
(99 %)
8 diff
(99.0 %id)
BC039424 Brain, hypothalamus .f 65 to 1577 1 to 1507 exact available from MGC, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 1507/1509
(99 %)
8 diff
(99.5 %id)
BX097469 colon .f 66 to 810 1 to 745 exact AAA   745/745
(100 %)
0 diff
(100 %id)
BI602399 brain, hypothalamus .f 66 to 940 7 to 876 exact available from MGC,   870/876
(99 %)
30 diff
(96.6 %id)
TI_45215730   .f 66 to 940 133 to 1002 exact     870/1002
(86 %)
30 diff
(97.1 %id)
AJ713340 bone marrow .f 99 to 446 1 to 349   AAA   349/349
(100 %)
2 diff
(99.5 %id)
BI438229 Pancreas, Purified pancreatic islet .f 101 to 704 1 to 604       604/604
(100 %)
3 diff
(99.6 %id)
AA573432 colon .f 195 to 813 619 to 1       619/619
(100 %)
0 diff
(100 %id)
BI467222 Pancreas, Purified pancreatic islet .f 256 to 837 582 to 1       582/582
(100 %)
0 diff
(100 %id)
BG181298   .f 283 to 836 1 to 552   AAA   552/552
(100 %)
3 diff
(99.5 %id)
BG214430   .f 288 to 836 9 to 559   AAA   551/559
(98 %)
6 diff
(99.0 %id)
BG204937   .f 290 to 836 61 to 607   AAA   547/607
(90 %)
6 diff
(99.1 %id)
BG206563   .f 307 to 1061 1 to 748       748/752
(99 %)
20 diff
(97.4 %id)
AI580135 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 320 to 841 532 to 11   AAA   522/522
(100 %)
0 diff
(100 %id)
BE048957 Kidney .f 362 to 843 482 to 1       482/482
(100 %)
0 diff
(100 %id)
BM460612 leiomyosarcoma, uterus .f 375 to 1337 1 to 974       974/1042
(93 %)
32 diff
(97.0 %id)
AA505816 breast .f 381 to 844 458 to 1       458/458
(100 %)
2 diff
(99.6 %id)
T06331   .f 392 to 668 1 to 277       277/277
(100 %)
0 diff
(100 %id)
BI324913 Pancreas, Purified pancreatic islet .f 407 to 837 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AA854201 parathyroid gland, parathyroid tumor .f 429 to 841 426 to 14   AAA   413/413
(100 %)
0 diff
(100 %id)
AA767090 germinal center B cell .f 568 to 836 283 to 15   AAA   269/269
(100 %)
0 diff
(100 %id)
DA093921 cerebellum .f 647 to 1115 2 to 471   capped   470/470
(100 %)
3 diff
(99.4 %id)
BX358890 Placenta Cot 25-normalized .f 682 to 1552 859 to 1   fully sequenced,   859/859
(100 %)
18 diff
(98.0 %id)
BF111806 pooled .f 920 to 1583 669 to 1       669/669
(100 %)
27 diff
(96.0 %id)
AA405788 ovarian tumor, ovary .f 1117 to 1518 14 to 415     Submitted on the opposite strand 402/415
(96 %)
8 diff
(98.1 %id)
W44797 parathyroid gland, parathyroid tumor .f 1144 to 1587 444 to 1       444/444
(100 %)
4 diff
(99.1 %id)
BE244308 leukopheresis .f 1260 to 1579 340 to 21   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 320/320
(100 %)
5 diff
(98.5 %id)
BX090736 ovarian tumor, ovary .f 1418 to 2045 627 to 1   tiling clone, Submitted on the opposite strand 627/627
(100 %)
1 diff
(99.9 %id)
AA306388   .f 1545 to 1891 1 to 346   tiling clone,   346/346
(100 %)
2 diff
(99.5 %id)
AW962952   .f 1546 to 2206 1 to 660       660/660
(100 %)
4 diff
(99.4 %id)
AA405894 ovarian tumor, ovary .f 1581 to 2002 417 to 1     Submitted on the opposite strand 417/417
(100 %)
11 diff
(97.4 %id)
BM015865 breast, mammary adenocarcinoma, cell line .f 1630 to 2418 1 to 788       788/788
(100 %)
11 diff
(98.7 %id)
TI_59394227   .f 1630 to 2418 93 to 880       788/788
(100 %)
11 diff
(98.7 %id)
BE062632 breast .f 1697 to 2103 408 to 1     Submitted on the opposite strand 408/422
(96 %)
4 diff
(99.1 %id)
AW843088 colon_normal .f 1751 to 2242 11 to 502       492/510
(96 %)
2 diff
(99.7 %id)
BU933092 mixed (pool of 40 RNAs) .f 1782 to 2466 1 to 689       689/864
(79 %)
18 diff
(98.0 %id)
BM717652 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 1992 to 2527 1 to 535   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 535/535
(100 %)
1 diff
(99.9 %id)
TI_159714377   .f 2000 to 2825 914 to 89   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 826/1034
(79 %)
10 diff
(99.1 %id)
AA046391 heart .f 2085 to 2514 1 to 443       443/443
(100 %)
18 diff
(96.0 %id)
N50230 multiple sclerosis lesions .f 2185 to 2464 1 to 282       282/283
(99 %)
4 diff
(98.6 %id)
CB306896 Human Lung Epithelial cells, lung .f 2194 to 2825 645 to 14   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 632/632
(100 %)
0 diff
(100 %id)
BF112192 pooled .f 2447 to 3011 579 to 14   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 566/566
(100 %)
2 diff
(99.7 %id)
TI_149273673   .f 2450 to 3104 740 to 86   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 655/1005
(65 %)
0 diff
(100 %id)
TI_149277150   .f 2450 to 3104 740 to 86   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 655/976
(67 %)
20 diff
(98.0 %id)
BM968138 lung, Primary Lung Epithelial Cells .f 2450 to 3104 673 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 655/671
(97 %)
0 diff
(100 %id)
BU739215 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 2497 to 3003 525 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 507/507
(100 %)
1 diff
(99.9 %id)
AW189880 adenocarcinoma, Pancreas .f 2510 to 3003 499 to 5       495/499
(99 %)
0 diff
(100 %id)
BU677524 lung, Primary Lung Epithelial Cells .f 2557 to 3104 567 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 549/549
(100 %)
8 diff
(98.6 %id)
BE219821 carcinoid, lung .f 2591 to 3099 509 to 1       509/509
(100 %)
0 diff
(100 %id)
BE219236 carcinoid, lung .f 2595 to 3099 505 to 1       505/505
(100 %)
1 diff
(99.9 %id)
CN288836 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 2600 to 3011 8 to 419   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 412/419
(98 %)
8 diff
(98.1 %id)
AI131473 heart .f 2636 to 3105 470 to 1       470/470
(100 %)
0 diff
(100 %id)
AA814861 germinal center B cell .f 2660 to 3077 418 to 1       418/418
(100 %)
4 diff
(99.1 %id)
N49176 multiple sclerosis lesions .f 2687 to 3105 422 to 1       422/423
(99 %)
4 diff
(99.1 %id)
AA046328 heart .f 2698 to 3100 409 to 1       409/409
(100 %)
16 diff
(96.1 %id)
BE814272 breast_normal .f 2720 to 2888 1 to 169       169/169
(100 %)
4 diff
(97.7 %id)
AA766352 germinal center B cell .f 2740 to 3077 338 to 1       338/338
(100 %)
0 diff
(100 %id)
AA769342 germinal center B cell .f 2806 to 3112 307 to 1   tiling clone,   307/307
(100 %)
1 diff
(99.7 %id)
AA928991 carcinoid, lung .f 2810 to 3100 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
BE619280 large cell carcinoma, lung .f 2810 to 3011 1 to 200   AAA Possibly primed on the genome, locally A rich (24/24 A in genome downstream of last aligned base) 200/200
(100 %)
2 diff
(99.0 %id)
DB102071 thymus .g 10 to 565 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
DA219046 brain .g 25 to 575 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA859901 placenta .g 25 to 570 2 to 547   capped   546/546
(100 %)
2 diff
(99.7 %id)
DB286244 uterus .g 26 to 576 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
BI822279 pooled brain, lung, testis .g 27 to 856 1 to 833 F48L V50S C51V G52V S53L ... tiling clone,   833/834
(99 %)
21 diff
(97.5 %id)
TI_57199110   .g 27 to 856 51 to 883 F48L V50S C51V G52V S53L ...     833/884
(94 %)
24 diff
(97.3 %id)
CA393594 eye, RPE/choroid .g 30 to 559 1 to 530       530/530
(100 %)
0 diff
(100 %id)
BG720676 testis .g 30 to 734 1 to 702 L43W A44L L45S F46S I47F ... tiling clone,   702/702
(100 %)
8 diff
(98.9 %id)
DA862071 placenta .g 51 to 568 2 to 519   capped   518/518
(100 %)
2 diff
(99.7 %id)
DA853342 placenta .g 52 to 615 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB235331 trachea .g 68 to 656 2 to 590 exact capped   589/589
(100 %)
4 diff
(99.4 %id)
DA213935 brain .g 111 to 649 2 to 540 exact capped   539/539
(100 %)
1 diff
(99.9 %id)
DA223263 brain .g 111 to 660 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
DA960460 Spleen .g 138 to 570 149 to 581   capped   553/580
(95 %)
9 diff
(98.5 %id)
DA965540 stomach .h 1 to 582 2 to 583 S61N tiling clone, capped   582/582
(100 %)
1 diff
(99.9 %id)
AK125413 brain .i 1 to 3421 1 to 3420 exact tiling clone, available from FLJ,   3420/3420
(100 %)
5 diff
(99.9 %id)
DA789038 brain .i 2 to 583 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
NM_014445.3   .i 768 to 3938 1 to 3171 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 3171/3171
(100 %)
0 diff
(100 %id)
DA445005 tongue, tumor tissue .i 837 to 1415 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA205112 brain .i 874 to 1433 2 to 561   capped   560/561
(99 %)
0 diff
(100 %id)
BJ991638 hepatoblastoma .i 879 to 1319 1 to 441       441/441
(100 %)
2 diff
(99.6 %id)
DA451382 tongue, tumor tissue .i 880 to 1440 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA454463 tongue, tumor tissue .i 882 to 1468 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA022456   .i 883 to 1440 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA290389 hippocampus .i 883 to 1451 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA654899   .i 883 to 1455 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA655531   .i 883 to 1453 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA206038 brain .i 884 to 1463 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA236313 brain .i 884 to 1456 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA439929 tongue, tumor tissue .i 884 to 1452 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA655269   .i 884 to 1460 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA748467   .i 884 to 1448 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA928137 small intestine .i 884 to 1449 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BQ014658 Chondrosarcoma, Left Pubic Bone .i 886 to 1582 713 to 17 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 697/712
(97 %)
0 diff
(100 %id)
DA021844   .i 890 to 1458 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA204444 brain .i 893 to 1474 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA265717 caudate nucleus .i 893 to 1480 2 to 589 exact capped   588/588
(100 %)
0 diff
(100 %id)
DB213368 trachea .i 893 to 1446 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
TI_45133590   .i 899 to 1694 59 to 858 L43W F48L M64H M66H     800/808
(99 %)
17 diff
(97.9 %id)
DA635234 Kidney .i 901 to 1456 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA208278 brain .i 903 to 1480 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA294021 hippocampus .i 903 to 1486 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DA393580 thalamus .i 903 to 1484 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA395781 thalamus .i 903 to 1496 2 to 595 exact capped   594/594
(100 %)
0 diff
(100 %id)
DA436664 tongue, tumor tissue .i 903 to 1479 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DA440646 tongue, tumor tissue .i 903 to 1474 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA442089 tongue, tumor tissue .i 903 to 1461 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA443403 tongue, tumor tissue .i 903 to 1460 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA453456 tongue, tumor tissue .i 903 to 1460 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA454695 tongue, tumor tissue .i 903 to 1465 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA475184   .i 903 to 1470 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA624292 Kidney .i 903 to 1455 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA659344   .i 903 to 1461 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA746535   .i 903 to 1460 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
AF136975 adrenal gland .i 905 to 2151 1 to 1254 exact AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1254/1254
(100 %)
10 diff
(99.3 %id)
DA144564 amygdala .i 908 to 1479 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA163216 amygdala .i 908 to 1489 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA291370 hippocampus .i 908 to 1487 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA477993   .i 908 to 1491 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DB042632 testis .i 908 to 1473 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA436934 tongue, tumor tissue .i 909 to 1492 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DA444544 tongue, tumor tissue .i 909 to 1480 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
BQ887334 carcinoma, cell line, Prostate .i 909 to 1717 1 to 811 exact     811/835
(97 %)
16 diff
(98.1 %id)
BQ928468 carcinoma, cell line, Prostate .i 909 to 1717 1 to 809 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 809/809
(100 %)
4 diff
(99.6 %id)
BU543846 carcinoma, cell line, Prostate .i 909 to 1717 1 to 809 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 809/809
(100 %)
0 diff
(100 %id)
DA752342   .i 909 to 1470 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA376210 thalamus .i 910 to 1474 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA204067 brain .i 911 to 1493 2 to 584 exact capped   583/583
(100 %)
0 diff
(100 %id)
DB103438 thymus .i 911 to 1489 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
AL521844 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .i 915 to 1831 1 to 917 exact     917/917
(100 %)
0 diff
(100 %id)
DA168357 amygdala .i 916 to 1470 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BU540649 large cell carcinoma, lung .i 916 to 1710 1 to 798 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 798/798
(100 %)
4 diff
(99.5 %id)
TI_154100373   .i 917 to 1582 770 to 106 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 665/687
(96 %)
10 diff
(98.6 %id)
DA436582 tongue, tumor tissue .i 919 to 1500 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
BC108314 Uterus, leiomyosarcoma .i 920 to 3885 1 to 2967 exact tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 2967/2967
(100 %)
4 diff
(99.9 %id)
BU581648 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .i 922 to 1555 1 to 634 exact     634/634
(100 %)
0 diff
(100 %id)
BU902038 leiomyosarcoma, uterus .i 922 to 1917 1 to 1007 exact     1007/1194
(84 %)
43 diff
(96.4 %id)
DA040866 bladder .i 924 to 1493 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DB264909 uterus .i 924 to 1513 2 to 591 exact capped   590/590
(100 %)
0 diff
(100 %id)
CR596114 Placenta Cot 25-normalized .i 925 to 3386 1 to 2462 exact tiling clone,   2462/2462
(100 %)
0 diff
(100 %id)
BM927874 hepatocellular carcinoma, cell line, Liver .i 925 to 1717 1 to 793 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 793/793
(100 %)
0 diff
(100 %id)
BQ652447 hepatocellular carcinoma, cell line, Liver .i 925 to 1717 1 to 795 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 795/795
(100 %)
4 diff
(99.5 %id)
CX866268 embryonic stem .i 926 to 1747 1 to 822 exact     822/822
(100 %)
0 diff
(100 %id)
BM557249 amelanotic melanoma, cell line, skin .i 928 to 1713 1 to 786 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 786/786
(100 %)
0 diff
(100 %id)
BM916491 amelanotic melanoma, cell line, skin .i 929 to 1711 1 to 784 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 784/786
(99 %)
6 diff
(99.3 %id)
BQ437717 eye, retinoblastoma .i 930 to 1631 1 to 703 exact     703/890
(78 %)
2 diff
(99.8 %id)
DB203699 trachea .i 932 to 1496 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
CB156528 brain .i 933 to 1614 1 to 682 exact     682/682
(100 %)
0 diff
(100 %id)
DA033248   .i 934 to 1515 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA293945 hippocampus .i 934 to 1493 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
CA866620 Pancreas, Purified pancreatic islet .i 934 to 1464 11 to 541   fully sequenced,   531/541
(98 %)
6 diff
(98.9 %id)
DB115571 thymus .i 934 to 1487 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA192564 amygdala .i 936 to 1521 2 to 587 exact capped   586/586
(100 %)
0 diff
(100 %id)
BM913381 amelanotic melanoma, cell line, skin .i 936 to 1710 1 to 774 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 774/774
(100 %)
1 diff
(99.9 %id)
DB196418 trachea .i 936 to 1499 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB230002 trachea .i 936 to 1525 2 to 591 exact capped   590/590
(100 %)
0 diff
(100 %id)
DB239351 trachea .i 936 to 1515 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
BM930364 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i 938 to 1680 1 to 743 exact fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 743/743
(100 %)
3 diff
(99.6 %id)
DB044837 testis .i 939 to 1503 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DB479726 hippocampus .i 941 to 1433 1 to 493       493/494
(99 %)
0 diff
(100 %id)
DB500284 hypothalamus .i 941 to 1415 1 to 474       474/474
(100 %)
4 diff
(99.2 %id)
BQ645251 hepatocellular carcinoma, cell line, Liver .i 942 to 1715 1 to 781 exact     781/969
(80 %)
13 diff
(98.7 %id)
DA582968 lung .i 945 to 1524 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA600873   .i 945 to 1504 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA878798 Prostate .i 945 to 1532 2 to 589 exact capped   588/588
(100 %)
0 diff
(100 %id)
DB121737 thymus .i 953 to 1506 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
AL136807 testis .i 959 to 3421 1 to 2464 exact available from DKFZ, AAA   2464/2464
(100 %)
3 diff
(99.9 %id)
DA448658 tongue, tumor tissue .i 960 to 1531 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DB198012 trachea .i 960 to 1548 2 to 590 exact capped   589/589
(100 %)
0 diff
(100 %id)
BC112364 PCR rescued clones .i 961 to 2646 1 to 1685 exact     1685/1685
(100 %)
3 diff
(99.9 %id)
BC112365 PCR rescued clones .i 961 to 2646 1 to 1685 exact     1685/1685
(100 %)
3 diff
(99.9 %id)
TI_154115377   .i 962 to 1710 830 to 82 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 749/957
(78 %)
6 diff
(99.4 %id)
CD048679 embryonic stem cells, WA01, passage 38 .i 963 to 1713 23 to 774 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 752/774
(97 %)
9 diff
(98.9 %id)
DA020728   .i 964 to 1524 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA888519   .i 964 to 1519 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DA922008 small intestine .i 964 to 1517 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
DA926014 small intestine .i 964 to 1545 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DB255366 uterus .i 964 to 1520 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
BP343745 stomach mucosa .i 965 to 1550 1 to 586 exact     586/586
(100 %)
0 diff
(100 %id)
DA525536 brain .i 966 to 1537 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DB493761 hypothalamus .i 966 to 1482 1 to 517 K26X     517/517
(100 %)
0 diff
(100 %id)
DB498471 hypothalamus .i 966 to 1478 1 to 513 exact     513/513
(100 %)
0 diff
(100 %id)
DA882193   .i 966 to 1521 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DA903971   .i 966 to 1522 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
DA952785 Spleen .i 966 to 1539 2 to 575 V49X capped   574/574
(100 %)
0 diff
(100 %id)
DB241835 stomach, tumor tissue .i 966 to 1525 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
CA430294 cell lines, Chondrosarcoma .i 967 to 1713 765 to 19 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 747/747
(100 %)
4 diff
(99.5 %id)
CA420463 Bone, Enchondroma cell line .i 969 to 1558 17 to 606 exact   Submitted on the opposite strand 590/594
(99 %)
1 diff
(99.9 %id)
DA137907 alzheimer cortex .i 970 to 1527 2 to 559 exact capped   558/558
(100 %)
0 diff
(100 %id)
DA723531   .i 970 to 1541 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA884601   .i 970 to 1537 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA029269   .i 971 to 1551 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
DA445916 tongue, tumor tissue .i 971 to 1545 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
BM478798 melanotic melanoma, skin .i 971 to 1713 1 to 743 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 743/743
(100 %)
0 diff
(100 %id)
DA766658 tongue .i 971 to 1541 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA872896 Prostate .i 971 to 1549 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA883580   .i 971 to 1540 2 to 571 Q20X capped   570/570
(100 %)
0 diff
(100 %id)
DB154553 thymus .i 971 to 1533 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DB198501 trachea .i 971 to 1572 2 to 603 exact capped   602/602
(100 %)
0 diff
(100 %id)
BQ670283 epidermoid carcinoma, cell line, salivary gland .i 978 to 1710 1 to 733 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 733/733
(100 %)
0 diff
(100 %id)
BQ949264 sciatic nerve .i 984 to 1715 1 to 732 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 732/732
(100 %)
4 diff
(99.5 %id)
BQ935957 carcinoma, cell line, Prostate .i 988 to 1710 1 to 721 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 721/721
(100 %)
2 diff
(99.8 %id)
DA682056 ovary .i 993 to 1548 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DB054222 testis .i 993 to 1565 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
BE396816 Burkitt lymphoma, lymph .i 1001 to 1694 1 to 690 exact     690/767
(89 %)
9 diff
(98.9 %id)
BM454726 embryonal carcinoma, cell line, testis .i 1003 to 1801 1 to 799 exact     799/1042
(76 %)
22 diff
(97.9 %id)
TI_154037701   .i 1019 to 1713 780 to 85 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 696/958
(72 %)
7 diff
(99.3 %id)
CA841934 Pancreas, Purified pancreatic islet .i 1025 to 1464 1 to 440   fully sequenced,   440/440
(100 %)
0 diff
(100 %id)
BU074689 Pancreas, Purified pancreatic islet .i 1032 to 1464 1 to 433   fully sequenced,   433/433
(100 %)
0 diff
(100 %id)
DA750051   .i 1034 to 1608 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
BI086204 astrocytoma grade IV, cell line, brain .i 1040 to 1464 1 to 425   fully sequenced,   425/425
(100 %)
0 diff
(100 %id)
CR618949 placenta .i 1044 to 1712 1 to 669 exact     669/669
(100 %)
0 diff
(100 %id)
DA039112 bladder .i 1051 to 1619 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
CA449119 Chondrosarcoma, Left Pubic Bone .i 1054 to 1710 675 to 19 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 657/657
(100 %)
0 diff
(100 %id)
AB022427   .i 1060 to 1713 1 to 655 exact     655/655
(100 %)
4 diff
(99.4 %id)
CR594954 placenta .i 1064 to 1718 1 to 655 exact     655/655
(100 %)
0 diff
(100 %id)
DB148628 thymus .i 1069 to 1627 2 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
DA203934 brain .i 1074 to 1630 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
TI_151723546   .i 1109 to 1710 709 to 108 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 602/859
(70 %)
6 diff
(99.4 %id)
TI_157613153   .i 1166 to 1715 643 to 94 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 550/550
(100 %)
6 diff
(99.0 %id)
BG655743 Pancreas, Purified pancreatic islet .i 1217 to 1576 360 to 1 exact   Submitted on the opposite strand 360/360
(100 %)
0 diff
(100 %id)
BE062184 breast .i 1224 to 1572 347 to 1 exact   Submitted on the opposite strand 347/347
(100 %)
2 diff
(99.5 %id)
DB569551 hypothalamus .i 1245 to 1713 1 to 469 exact   Submitted on the opposite strand 469/470
(99 %)
1 diff
(99.8 %id)
DB564817 hypothalamus .i 1265 to 1713 1 to 449 exact   Submitted on the opposite strand 449/450
(99 %)
1 diff
(99.8 %id)
CR533472   .i 1274 to 1671 1 to 398 exact     398/398
(100 %)
0 diff
(100 %id)
AA834599 germinal center B cell .i 1274 to 1423 150 to 1       150/150
(100 %)
0 diff
(100 %id)
AA847606 carcinoid, lung .i 1274 to 1713 440 to 1 exact     440/440
(100 %)
0 diff
(100 %id)
AA847639 colon, colon tumor .i 1274 to 1576 303 to 1 exact     303/303
(100 %)
0 diff
(100 %id)
AA837272 germinal center B cell .i 1280 to 1576 296 to 1       296/296
(100 %)
1 diff
(99.7 %id)
X75694   .i 1292 to 1509 1 to 219   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 219/219
(100 %)
4 diff
(98.2 %id)
CR983350 T-Lymphocytes .i 1296 to 2108 1 to 812       812/815
(99 %)
2 diff
(99.8 %id)
BE699089 nervous_normal .i 1315 to 1577 262 to 1       262/262
(100 %)
1 diff
(99.7 %id)
BM683826 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i 1327 to 1710 402 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 384/384
(100 %)
0 diff
(100 %id)
BG182489   .i 1358 to 1582 246 to 22   AAA Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
BG187201   .i 1358 to 1582 245 to 21   AAA Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
BG196038   .i 1358 to 1582 241 to 17   AAA Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
BG206346   .i 1358 to 1582 243 to 19   AAA Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
BG211540   .i 1358 to 1582 242 to 18   AAA Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
BG211979   .i 1358 to 1600 260 to 18   AAA Submitted on the opposite strand 243/243
(100 %)
1 diff
(99.6 %id)
BG213664   .i 1358 to 1713 373 to 18   AAA Submitted on the opposite strand 356/356
(100 %)
2 diff
(99.5 %id)
BG215850   .i 1358 to 1582 250 to 26   AAA Submitted on the opposite strand 225/225
(100 %)
0 diff
(100 %id)
TI_59394489   .i 1373 to 2140 79 to 843       765/765
(100 %)
6 diff
(99.3 %id)
BI023412 marrow .i 1376 to 1620 244 to 1       244/244
(100 %)
2 diff
(99.2 %id)
DA208913 brain .i 1400 to 1970 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BI086148 astrocytoma grade IV, cell line, brain .i 1403 to 1641 238 to 1   fully sequenced,   238/238
(100 %)
0 diff
(100 %id)
BU074404 Pancreas, Purified pancreatic islet .i 1403 to 1712 310 to 1   fully sequenced,   310/310
(100 %)
0 diff
(100 %id)
CA841638 Pancreas, Purified pancreatic islet .i 1403 to 1709 308 to 1   fully sequenced,   308/308
(100 %)
0 diff
(100 %id)
CA866884 Pancreas, Purified pancreatic islet .i 1403 to 1717 315 to 1   fully sequenced,   315/315
(100 %)
0 diff
(100 %id)
BG205269   .i 1445 to 1578 153 to 20   AAA Submitted on the opposite strand 134/136
(98 %)
0 diff
(100 %id)
DB180746 kidney, tumor tissue .i 1496 to 2066 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA075623 cerebellum .i 1499 to 2075 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB007607 cervix, tumor tissue .i 1547 to 2113 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA475805   .i 1590 to 2148 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AA659660 alveolar rhabdomyosarcoma .i 1628 to 1713 1 to 86   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 86/86
(100 %)
0 diff
(100 %id)
DA142813 alzheimer cortex .i 1641 to 2200 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
CV571794 cornea, eye .i 1712 to 2292 1 to 581       581/581
(100 %)
0 diff
(100 %id)
TI_59392990   .i 1713 to 2479 88 to 854       767/768
(99 %)
5 diff
(99.4 %id)
EC557202 Prostate .i 1719 to 1826 107 to 1       107/107
(100 %)
1 diff
(99.1 %id)
DA833442 placenta .i 1829 to 2627 2 to 808   capped   807/807
(100 %)
25 diff
(97.0 %id)
AK054644   .i 1942 to 3932 1 to 1984   available from FLJ,   1984/1984
(100 %)
8 diff
(99.6 %id)
DA038306   .i 1943 to 2520 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DB198497 trachea .i 1997 to 2622 2 to 626   capped   625/625
(100 %)
1 diff
(99.9 %id)
TI_154169346   .i 2071 to 2570 80 to 578       499/499
(100 %)
1 diff
(99.8 %id)
TI_154179504   .i 2080 to 2946 74 to 927       854/856
(99 %)
19 diff
(97.8 %id)
EH343989   .i 2177 to 2226 1 to 50       50/50
(100 %)
0 diff
(100 %id)
CV569434 cornea, eye .i 2186 to 2781 1 to 596       596/596
(100 %)
0 diff
(100 %id)
BM541763 leiomyosarcoma, uterus .i 2244 to 3256 1 to 1019       1019/1028
(99 %)
23 diff
(97.8 %id)
BP340617 Spleen .i 2258 to 2841 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BQ312422 breast_normal .i 2260 to 2379 121 to 2       120/121
(99 %)
0 diff
(100 %id)
BF748549 breast_normal .i 2263 to 2632 397 to 28     Submitted on the opposite strand 370/397
(93 %)
0 diff
(100 %id)
BF838281 head_neck .i 2266 to 2603 351 to 15     Submitted on the opposite strand 337/363
(92 %)
6 diff
(98.4 %id)
BM833230 stomach .i 2281 to 2920 1 to 640       640/640
(100 %)
0 diff
(100 %id)
TI_154180490   .i 2283 to 3078 78 to 867       790/946
(83 %)
18 diff
(98.1 %id)
TI_154180541   .i 2283 to 3112 77 to 893       817/930
(87 %)
20 diff
(97.9 %id)
FN131089 breast carcinoma .i 2329 to 2421 95 to 2     Submitted on the opposite strand 94/95
(98 %)
0 diff
(100 %id)
FN116215 breast carcinoma .i 2342 to 2392 52 to 1     Submitted on the opposite strand 52/52
(100 %)
1 diff
(98.1 %id)
CR606798 Neuroblastoma Cot 25-normalized .i 2403 to 3389 1 to 987       987/987
(100 %)
0 diff
(100 %id)
TI_154129468   .i 2414 to 3421 1112 to 105   AAA   1008/1016
(99 %)
92 diff
(91.0 %id)
AL521843 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .i 2417 to 3401 984 to 1       984/988
(99 %)
14 diff
(98.6 %id)
BE161780 head_neck .i 2428 to 3080 8 to 657       650/658
(98 %)
4 diff
(99.4 %id)
FN083761 breast carcinoma .i 2436 to 2525 90 to 1     Submitted on the opposite strand 90/90
(100 %)
0 diff
(100 %id)
BE161787 head_neck .i 2437 to 3118 1 to 678       678/705
(96 %)
14 diff
(98.1 %id)
TI_159715025   .i 2446 to 3232 873 to 93   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 781/989
(78 %)
8 diff
(99.2 %id)
BP195514 brain .i 2458 to 3040 1 to 583       583/583
(100 %)
0 diff
(100 %id)
CB321844 Human Lung Epithelial cells, lung .i 2528 to 3232 721 to 17   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 705/705
(100 %)
0 diff
(100 %id)
FN088084 breast carcinoma .i 2557 to 2682 1 to 121       121/121
(100 %)
5 diff
(95.9 %id)
FN059316 breast carcinoma .i 2558 to 2682 125 to 1     Submitted on the opposite strand 125/125
(100 %)
0 diff
(100 %id)
BE709971 head_neck .i 2562 to 2985 423 to 1       423/423
(100 %)
2 diff
(99.6 %id)
TI_149294555   .i 2575 to 3420 944 to 107   AAA   838/948
(88 %)
14 diff
(98.6 %id)
BM769346 stomach .i 2581 to 3196 1 to 616       616/616
(100 %)
0 diff
(100 %id)
BM817975 stomach .i 2581 to 3179 1 to 599       599/599
(100 %)
0 diff
(100 %id)
BM830999 stomach .i 2581 to 3278 1 to 698       698/698
(100 %)
0 diff
(100 %id)
BU508378 leiomyosarcoma, uterus .i 2584 to 3457 1 to 885       885/945
(93 %)
18 diff
(98.1 %id)
BU162165 eye, retinoblastoma .i 2598 to 3420 1 to 826       826/870
(94 %)
11 diff
(98.8 %id)
AA128348 uterus .i 2605 to 3051 1 to 450   fully sequenced,   450/450
(100 %)
2 diff
(99.6 %id)
TI_154100561   .i 2619 to 3421 880 to 81   AAA   800/800
(100 %)
7 diff
(99.2 %id)
AA280693 germinal center B cell .i 2635 to 3051 1 to 417   fully sequenced,   417/417
(100 %)
3 diff
(99.3 %id)
AW795378 uterus .i 2638 to 3165 529 to 1       529/533
(99 %)
15 diff
(97.2 %id)
CR618644 fetal brain .i 2643 to 3422 1 to 780       780/780
(100 %)
0 diff
(100 %id)
BX418912 brain, fetal brain .i 2643 to 3422 1 to 780       780/780
(100 %)
0 diff
(100 %id)
BX444836 brain, fetal brain .i 2643 to 3422 1 to 780       780/780
(100 %)
0 diff
(100 %id)
BX454898 brain, fetal brain .i 2643 to 3413 772 to 6       767/772
(99 %)
0 diff
(100 %id)
GW492865 diffuse (Lauren) gastric adenocarcinoma, stomach .i 2665 to 3045 381 to 1     Submitted on the opposite strand 381/381
(100 %)
0 diff
(100 %id)
GW492888 diffuse (Lauren) gastric adenocarcinoma, stomach .i 2665 to 3045 381 to 1     Submitted on the opposite strand 381/381
(100 %)
0 diff
(100 %id)
FN073612 breast carcinoma .i 2675 to 2778 1 to 103       103/103
(100 %)
1 diff
(99.1 %id)
CR594259 T cells (Jurkat cell line) .i 2686 to 3422 1 to 737       737/737
(100 %)
0 diff
(100 %id)
FN143219 breast carcinoma .i 2689 to 2795 105 to 1     Submitted on the opposite strand 105/105
(100 %)
2 diff
(98.1 %id)
TI_149293039   .i 2691 to 3421 742 to 20   AAA   723/809
(89 %)
43 diff
(94.7 %id)
BU619460 cell lines, Chondrosarcoma .i 2696 to 3421 744 to 19   AAA   726/726
(100 %)
0 diff
(100 %id)
BQ014452 Chondrosarcoma, Left Pubic Bone .i 2714 to 3416 718 to 16   AAA   703/703
(100 %)
0 diff
(100 %id)
FN087214 breast carcinoma .i 2738 to 2851 114 to 1     Submitted on the opposite strand 114/114
(100 %)
0 diff
(100 %id)
CX866186 embryonic stem .i 2755 to 3420 692 to 27   AAA   666/666
(100 %)
0 diff
(100 %id)
AW579134 denis_drash .i 2756 to 3398 644 to 8       637/647
(98 %)
0 diff
(100 %id)
BF238939 bone marrow, from chronic myelogenous leukemia .i 2766 to 3460 1 to 683       683/699
(97 %)
19 diff
(97.3 %id)
BM985079 lung .i 2784 to 3420 655 to 19   AAA   637/637
(100 %)
0 diff
(100 %id)
BU633793 cell lines, Chondrosarcoma .i 2784 to 3421 656 to 19   AAA   638/638
(100 %)
0 diff
(100 %id)
BM989391 Fibrosarcoma .i 2793 to 3421 647 to 19   AAA   629/629
(100 %)
1 diff
(99.9 %id)
FN134084 breast carcinoma .i 2803 to 2918 115 to 1     Submitted on the opposite strand 115/115
(100 %)
3 diff
(97.4 %id)
CA450200 Human Lung Epithelial cells, lung .i 2814 to 3421 626 to 19   AAA   608/614
(99 %)
1 diff
(99.9 %id)
TI_149280313   .i 2824 to 3420 680 to 84   AAA   597/1149
(51 %)
2 diff
(99.9 %id)
CA441475 Fibrosarcoma .i 2826 to 3421 614 to 19   AAA   596/596
(100 %)
0 diff
(100 %id)
AA461218   .i 2831 to 3171 1 to 341   fully sequenced,   341/341
(100 %)
1 diff
(99.8 %id)
AA461394   .i 2831 to 3115 1 to 285   fully sequenced,   285/285
(100 %)
1 diff
(99.7 %id)
BG939870 blood .i 2839 to 3181 1 to 343       343/343
(100 %)
0 diff
(100 %id)
BQ015725 lung, Metastatic Chondrosarcoma .i 2848 to 3421 592 to 19   AAA   574/574
(100 %)
0 diff
(100 %id)
FN174756 breast carcinoma .i 2849 to 2956 108 to 1     Submitted on the opposite strand 108/108
(100 %)
4 diff
(96.3 %id)
BM422333 testis .i 2870 to 3421 583 to 31   AAA Submitted on the opposite strand 553/553
(100 %)
16 diff
(97.2 %id)
FN105843 breast carcinoma .i 2879 to 2965 1 to 89       89/90
(98 %)
2 diff
(97.8 %id)
DB326515 brain .i 2883 to 3421 539 to 1       539/539
(100 %)
0 diff
(100 %id)
BF095848 uterus_tumor .i 2895 to 3184 291 to 1       291/294
(98 %)
14 diff
(95.3 %id)
BF155911 head_neck .i 2896 to 3194 341 to 42       300/341
(87 %)
0 diff
(100 %id)
BF086512 placenta_normal .i 2902 to 3228 341 to 14       328/341
(96 %)
0 diff
(100 %id)
BF086551 placenta_normal .i 2906 to 3186 285 to 5       281/287
(97 %)
0 diff
(100 %id)
BE928482 colon .i 2908 to 3142 240 to 1       240/241
(99 %)
12 diff
(95.1 %id)
BF095859 uterus_tumor .i 2908 to 3199 293 to 1       293/294
(99 %)
25 diff
(91.5 %id)
BF095876 uterus_tumor .i 2908 to 3200 298 to 4       295/299
(98 %)
0 diff
(100 %id)
BF095968 uterus_tumor .i 2908 to 3209 304 to 1       304/305
(99 %)
7 diff
(97.8 %id)
BE928506 colon .i 2909 to 3228 333 to 12       322/333
(96 %)
0 diff
(100 %id)
BE928504 colon .i 2910 to 3204 299 to 5       295/299
(98 %)
0 diff
(100 %id)
BE928511 colon .i 2910 to 3228 331 to 14       318/331
(96 %)
0 diff
(100 %id)
BF084188 colon .i 2910 to 3233 330 to 11       320/330
(96 %)
0 diff
(100 %id)
BF084191 colon .i 2910 to 3059 150 to 3       148/150
(98 %)
0 diff
(100 %id)
BF084194 colon .i 2910 to 3139 238 to 9       230/238
(96 %)
0 diff
(100 %id)
BF084202 colon .i 2910 to 3228 320 to 4       317/320
(99 %)
0 diff
(100 %id)
BF084204 colon .i 2910 to 3212 309 to 8       302/309
(97 %)
0 diff
(100 %id)
BF084213 colon .i 2910 to 3228 332 to 16       317/332
(95 %)
0 diff
(100 %id)
BF084231 colon .i 2910 to 3223 314 to 1       314/314
(100 %)
10 diff
(96.9 %id)
BF084233 colon .i 2910 to 3228 339 to 23       317/339
(93 %)
0 diff
(100 %id)
BF084238 colon .i 2910 to 3228 324 to 7       318/324
(98 %)
0 diff
(100 %id)
BF084245 colon .i 2910 to 3228 332 to 15       318/332
(95 %)
0 diff
(100 %id)
BF084249 colon .i 2910 to 3213 328 to 26       303/328
(92 %)
0 diff
(100 %id)
BF084257 colon .i 2910 to 3233 328 to 7       322/328
(98 %)
0 diff
(100 %id)
BF084276 colon .i 2910 to 3229 331 to 14       318/331
(96 %)
0 diff
(100 %id)
BF084281 colon .i 2910 to 3127 218 to 1       218/218
(100 %)
3 diff
(98.7 %id)
BF084282 colon .i 2910 to 3127 218 to 1       218/218
(100 %)
2 diff
(99.1 %id)
BF084283 colon .i 2910 to 3127 218 to 1       218/218
(100 %)
3 diff
(98.7 %id)
BF084288 colon .i 2910 to 3228 331 to 13       319/331
(96 %)
0 diff
(100 %id)
BF084290 colon .i 2910 to 3021 110 to 1       110/110
(100 %)
2 diff
(98.2 %id)
BF084294 colon .i 2910 to 3222 314 to 2       313/314
(99 %)
0 diff
(100 %id)
BF084299 colon .i 2910 to 3228 331 to 14       318/331
(96 %)
0 diff
(100 %id)
BF084300 colon .i 2910 to 3228 332 to 15       318/332
(95 %)
0 diff
(100 %id)
BF086485 placenta_normal .i 2910 to 3224 316 to 1       316/316
(100 %)
10 diff
(96.9 %id)
BF086508 placenta_normal .i 2910 to 3208 306 to 4       303/306
(99 %)
0 diff
(100 %id)
BF086522 placenta_normal .i 2910 to 3224 316 to 1       316/316
(100 %)
5 diff
(98.5 %id)
BF086527 placenta_normal .i 2910 to 3224 318 to 1       318/318
(100 %)
6 diff
(98.2 %id)
BF086543 placenta_normal .i 2910 to 3228 332 to 14       319/332
(96 %)
0 diff
(100 %id)
BF086544 placenta_normal .i 2910 to 3228 347 to 29       319/347
(91 %)
0 diff
(100 %id)
BF086546 placenta_normal .i 2910 to 3229 345 to 28       318/345
(92 %)
0 diff
(100 %id)
BF086547 placenta_normal .i 2910 to 3228 344 to 27       318/344
(92 %)
0 diff
(100 %id)
BF086550 placenta_normal .i 2910 to 3228 324 to 8       317/324
(97 %)
0 diff
(100 %id)
BF086662 placenta_normal .i 2910 to 3228 341 to 22       320/341
(93 %)
0 diff
(100 %id)
BF086664 placenta_normal .i 2910 to 3228 348 to 31       318/348
(91 %)
0 diff
(100 %id)
BF086672 placenta_normal .i 2910 to 3224 315 to 1       315/315
(100 %)
1 diff
(99.7 %id)
BF086675 placenta_normal .i 2910 to 3224 315 to 1       315/315
(100 %)
0 diff
(100 %id)
BF086678 placenta_normal .i 2910 to 3228 338 to 20       319/338
(94 %)
0 diff
(100 %id)
BF086679 placenta_normal .i 2910 to 3228 331 to 13       319/331
(96 %)
0 diff
(100 %id)
BF089542 head_neck .i 2910 to 3228 334 to 16       319/334
(95 %)
0 diff
(100 %id)
BF089546 head_neck .i 2910 to 3228 348 to 29       320/348
(91 %)
0 diff
(100 %id)
BF089550 head_neck .i 2910 to 3228 323 to 5       319/323
(98 %)
0 diff
(100 %id)
BF089552 head_neck .i 2910 to 3228 331 to 13       319/331
(96 %)
0 diff
(100 %id)
BF089559 head_neck .i 2910 to 3162 254 to 1       254/254
(100 %)
3 diff
(98.9 %id)
BF093315 testis_normal .i 2910 to 3210 301 to 1       301/301
(100 %)
10 diff
(96.7 %id)
BF093323 testis_normal .i 2910 to 3209 300 to 1       300/300
(100 %)
11 diff
(96.4 %id)
BF093331 testis_normal .i 2910 to 3164 265 to 13       253/265
(95 %)
0 diff
(100 %id)
BF093341 testis_normal .i 2910 to 3221 309 to 1       309/309
(100 %)
5 diff
(98.4 %id)
BF093344 testis_normal .i 2910 to 3205 299 to 5       295/299
(98 %)
0 diff
(100 %id)
BF093350 testis_normal .i 2910 to 3212 304 to 3       302/304
(99 %)
0 diff
(100 %id)
BF093351 testis_normal .i 2910 to 3228 334 to 16       319/334
(95 %)
0 diff
(100 %id)
BF093360 testis_normal .i 2910 to 3228 326 to 8       319/326
(97 %)
0 diff
(100 %id)
BF093363 testis_normal .i 2910 to 3201 292 to 2       291/292
(99 %)
0 diff
(100 %id)
BF095833 uterus_tumor .i 2910 to 3212 304 to 1       304/304
(100 %)
12 diff
(96.1 %id)
BF095845 uterus_tumor .i 2910 to 3209 301 to 3       299/301
(99 %)
0 diff
(100 %id)
BF095846 uterus_tumor .i 2910 to 3233 331 to 10       322/331
(97 %)
0 diff
(100 %id)
BF095851 uterus_tumor .i 2910 to 3226 318 to 1       318/318
(100 %)
4 diff
(98.8 %id)
BF095856 uterus_tumor .i 2910 to 3191 284 to 2       283/284
(99 %)
0 diff
(100 %id)
BF095863 uterus_tumor .i 2910 to 3226 320 to 3       318/320
(99 %)
0 diff
(100 %id)
BF095864 uterus_tumor .i 2910 to 3232 325 to 4       322/325
(99 %)
0 diff
(100 %id)
BF095877 uterus_tumor .i 2910 to 3212 307 to 3       305/307
(99 %)
0 diff
(100 %id)
BF095885 uterus_tumor .i 2910 to 3221 313 to 1       313/313
(100 %)
3 diff
(99.1 %id)
BF095891 uterus_tumor .i 2910 to 3228 321 to 7       315/321
(98 %)
0 diff
(100 %id)
BF095899 uterus_tumor .i 2910 to 3228 336 to 20       317/336
(94 %)
0 diff
(100 %id)
BF095904 uterus_tumor .i 2910 to 3160 257 to 7       251/257
(97 %)
0 diff
(100 %id)
BF095906 uterus_tumor .i 2910 to 3160 254 to 2       253/254
(99 %)
0 diff
(100 %id)
BF095933 uterus_tumor .i 2910 to 3203 297 to 2       296/297
(99 %)
0 diff
(100 %id)
BF095938 uterus_tumor .i 2910 to 3195 289 to 1       289/289
(100 %)
14 diff
(95.2 %id)
BF095955 uterus_tumor .i 2910 to 3195 286 to 1       286/286
(100 %)
15 diff
(94.8 %id)
BF095966 uterus_tumor .i 2910 to 3212 301 to 1       301/301
(100 %)
8 diff
(97.4 %id)
BF095967 uterus_tumor .i 2910 to 3192 281 to 1       281/281
(100 %)
10 diff
(96.5 %id)
BF155907 head_neck .i 2910 to 3228 348 to 29       320/348
(91 %)
0 diff
(100 %id)
BF155908 head_neck .i 2910 to 3227 325 to 8       318/325
(97 %)
0 diff
(100 %id)
BF155914 head_neck .i 2910 to 3187 285 to 5       281/285
(98 %)
0 diff
(100 %id)
BF155916 head_neck .i 2910 to 3193 284 to 1       284/284
(100 %)
2 diff
(99.3 %id)
BF155929 head_neck .i 2910 to 3174 267 to 2       266/267
(99 %)
0 diff
(100 %id)
BF155937 head_neck .i 2910 to 3228 327 to 8       320/327
(97 %)
0 diff
(100 %id)
BF155942 head_neck .i 2910 to 3200 296 to 2       295/296
(99 %)
0 diff
(100 %id)
BF155949 head_neck .i 2910 to 3228 344 to 26       319/344
(92 %)
0 diff
(100 %id)
BF155951 head_neck .i 2910 to 3228 348 to 31       318/348
(91 %)
0 diff
(100 %id)
BF155952 head_neck .i 2910 to 3228 346 to 28       319/346
(92 %)
0 diff
(100 %id)
BF155955 head_neck .i 2910 to 3170 274 to 17       258/274
(94 %)
0 diff
(100 %id)
BQ318165 colon .i 2910 to 3228 325 to 7       319/325
(98 %)
0 diff
(100 %id)
BQ354079 head_neck .i 2910 to 3189 286 to 6       281/286
(98 %)
0 diff
(100 %id)
BQ365505 placenta_normal .i 2910 to 3228 331 to 13       319/331
(96 %)
0 diff
(100 %id)
BQ378412 uterus_tumor .i 2910 to 3214 304 to 1       304/304
(100 %)
10 diff
(96.8 %id)
BQ378418 uterus_tumor .i 2910 to 3197 290 to 1       290/290
(100 %)
0 diff
(100 %id)
BQ378422 uterus_tumor .i 2910 to 3184 284 to 7       278/284
(97 %)
0 diff
(100 %id)
BQ378440 uterus_tumor .i 2910 to 3185 274 to 1       274/274
(100 %)
12 diff
(95.7 %id)
BQ378448 uterus_tumor .i 2910 to 3167 259 to 1       259/259
(100 %)
12 diff
(95.4 %id)
BQ378449 uterus_tumor .i 2910 to 3134 225 to 3       223/225
(99 %)
0 diff
(100 %id)
BF095929 uterus_tumor .i 2911 to 3105 196 to 1       196/197
(99 %)
7 diff
(96.5 %id)
BF095942 uterus_tumor .i 2911 to 3198 290 to 1       290/291
(99 %)
9 diff
(97.0 %id)
BF086510 placenta_normal .i 2913 to 3228 328 to 14       315/328
(96 %)
0 diff
(100 %id)
BF093332 testis_normal .i 2913 to 3228 329 to 14       316/329
(96 %)
0 diff
(100 %id)
BJ991639 hepatoblastoma .i 2920 to 3389 470 to 1       470/470
(100 %)
0 diff
(100 %id)
BF095822 uterus_tumor .i 2921 to 3362 442 to 2       441/442
(99 %)
0 diff
(100 %id)
BF084302 colon .i 2924 to 3228 319 to 15       305/319
(95 %)
0 diff
(100 %id)
BF086507 placenta_normal .i 2927 to 3224 302 to 1       302/302
(100 %)
11 diff
(96.4 %id)
BF086515 placenta_normal .i 2931 to 3228 311 to 14       298/311
(95 %)
0 diff
(100 %id)
BF838189 head_neck .i 2935 to 3238 308 to 5     Submitted on the opposite strand 304/308
(98 %)
0 diff
(100 %id)
AW838234 leiomios .i 2937 to 3305 367 to 2       366/367
(99 %)
0 diff
(100 %id)
DB524747 testis .i 2942 to 3419 1 to 478     Submitted on the opposite strand 478/480
(99 %)
1 diff
(99.8 %id)
BF095844 uterus_tumor .i 2957 to 3209 257 to 1       257/257
(100 %)
16 diff
(93.8 %id)
BF089548 head_neck .i 2959 to 3416 478 to 21       458/478
(95 %)
8 diff
(98.4 %id)
DN917314   .i 2961 to 3421 461 to 1       461/461
(100 %)
6 diff
(98.7 %id)
AW838224 leiomios .i 2969 to 3369 405 to 3       403/405
(99 %)
0 diff
(100 %id)
CV414475 uterus_tumor .i 2981 to 3226 1 to 248       248/249
(99 %)
23 diff
(90.8 %id)
AW954296   .i 2995 to 3357 365 to 1     Submitted on the opposite strand 365/365
(100 %)
1 diff
(99.8 %id)
BF084250 colon .i 3002 to 3382 423 to 47       377/423
(89 %)
0 diff
(100 %id)
BE928485 colon .i 3015 to 3226 214 to 1       214/214
(100 %)
15 diff
(93.0 %id)
AA085757 uterus .i 3021 to 3421 396 to 1   fully sequenced,   396/396
(100 %)
0 diff
(100 %id)
AA280694 germinal center B cell .i 3021 to 3420 400 to 1   fully sequenced,   400/400
(100 %)
0 diff
(100 %id)
BF754122 colon .i 3028 to 3371 345 to 1     Submitted on the opposite strand 345/345
(100 %)
8 diff
(97.7 %id)
BF149309 skin .i 3046 to 3219 174 to 1       174/174
(100 %)
0 diff
(100 %id)
BE928503 colon .i 3047 to 3224 178 to 1       178/178
(100 %)
3 diff
(98.4 %id)
BF086502 placenta_normal .i 3047 to 3416 376 to 7       370/376
(98 %)
18 diff
(95.3 %id)
BF086514 placenta_normal .i 3048 to 3405 356 to 1       356/356
(100 %)
6 diff
(98.4 %id)
BE161812 head_neck .i 3051 to 3396 344 to 2     Submitted on the opposite strand 343/344
(99 %)
0 diff
(100 %id)
BG939871 blood .i 3067 to 3420 385 to 32   AAA   354/354
(100 %)
1 diff
(99.8 %id)
FN129133 breast carcinoma .i 3071 to 3184 1 to 109       109/109
(100 %)
5 diff
(95.5 %id)
BQ318268 colon .i 3081 to 3224 144 to 1       144/144
(100 %)
0 diff
(100 %id)
AA461082   .i 3085 to 3421 354 to 18   fully sequenced, AAA   337/337
(100 %)
0 diff
(100 %id)
C05963   .i 3105 to 3421 326 to 10       317/326
(97 %)
0 diff
(100 %id)
BF086509 placenta_normal .i 3129 to 3416 294 to 7       288/294
(97 %)
13 diff
(95.6 %id)
AA460916   .i 3141 to 3421 299 to 19   fully sequenced, AAA   281/281
(100 %)
0 diff
(100 %id)
T36295 Pancreas .i 3174 to 3421 250 to 1     Submitted on the opposite strand 250/250
(100 %)
1 diff
(99.6 %id)
FN054033 breast carcinoma .i 3177 to 3284 1 to 107       107/108
(99 %)
2 diff
(98.2 %id)
AA173898   .i 3215 to 3420 226 to 17   AAA Submitted on the opposite strand 210/210
(100 %)
4 diff
(98.1 %id)
AA172210   .i 3216 to 3380 1 to 165     Submitted on the opposite strand 165/170
(97 %)
1 diff
(99.5 %id)
BF095865 uterus_tumor .i 3244 to 3397 158 to 2       157/158
(99 %)
0 diff
(100 %id)
FN135935 breast carcinoma .i 3284 to 3354 1 to 71       71/80
(88 %)
0 diff
(100 %id)
FN057543 breast carcinoma .i 3286 to 3393 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
GD146379   .i 3350 to 3434 1 to 85   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 85/85
(100 %)
6 diff
(93.0 %id)
GD143397   .i 3351 to 3420 1 to 70   AAA   70/70
(100 %)
3 diff
(95.8 %id)
DB380176 placenta .i 3379 to 3932 549 to 1   tiling clone,   549/575
(95 %)
13 diff
(97.8 %id)
DB295884   .i 3419 to 3932 510 to 1   tiling clone,   510/510
(100 %)
5 diff
(99.1 %id)
CN412643 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .j-u 1 to 584 1 to 585   tiling clone,   585/585
(100 %)
1 diff
(99.9 %id)
AA165140   .j-u 88 to 525 1 to 438     Submitted on the opposite strand 438/438
(100 %)
2 diff
(99.6 %id)
BQ364282 stomach .j-u 233 to 582 7 to 354       348/357
(97 %)
32 diff
(91.1 %id)
BX497419 Liver .j-u 269 to 777 1 to 508   tiling clone,   508/508
(100 %)
2 diff
(99.7 %id)
BX498364 Liver .j-u 711 to 1228 1 to 517   tiling clone,   517/517
(100 %)
2 diff
(99.7 %id)
AW577986 colon_normal .j-u 816 to 1454 651 to 18 K8Q F64C F70L     634/651
(97 %)
0 diff
(100 %id)
DB268628 uterus .j-u 913 to 1475 2 to 565 A33T C68Y tiling clone, capped   564/564
(100 %)
6 diff
(99.0 %id)
DA816036   .j-u 918 to 1487 2 to 572 exact capped   571/571
(100 %)
1 diff
(99.9 %id)
BP422120 small intestine .j-u 963 to 1471 1 to 509 exact tiling clone, Submitted on the opposite strand 509/509
(100 %)
0 diff
(100 %id)
AA847861 germinal center B cell .j-u 1118 to 1449 332 to 1 exact     332/332
(100 %)
0 diff
(100 %id)
DB115801 thymus .j-u 1174 to 1738 2 to 567 exact capped   566/566
(100 %)
1 diff
(99.9 %id)
AA954038 pooled .j-u 1211 to 1586 376 to 1       376/376
(100 %)
0 diff
(100 %id)
BX441188 brain, fetal brain .j-u 1269 to 2209 1 to 937   tiling clone,   937/943
(99 %)
5 diff
(99.5 %id)
TI_154177458   .j-u 1788 to 2400 80 to 691   tiling clone,   612/614
(99 %)
12 diff
(98.1 %id)
Z44000 brain, total brain .j-u 1810 to 2188 1 to 378       378/378
(100 %)
1 diff
(99.8 %id)
TI_154169123   .j-u 1816 to 2321 81 to 585   tiling clone,   505/505
(100 %)
1 diff
(99.9 %id)
Z40054 brain, total brain .j-u 3039 to 3293 255 to 1   tiling clone,   255/255
(100 %)
0 diff
(100 %id)
W03945 liver and spleen .k-u 1 to 455 1 to 452   tiling clone, fully sequenced,   452/452
(100 %)
7 diff
(98.5 %id)
N73885 liver and spleen .k-u 433 to 992 567 to 1   tiling clone, fully sequenced,   567/567
(100 %)
28 diff
(95.1 %id)
AA853551 Bone, Hip .k-u 893 to 1105 17 to 229   tiling clone,   213/229
(93 %)
6 diff
(97.4 %id)
TI_154179060   .l 1 to 757 78 to 818 exact tiling clone,   741/901
(82 %)
7 diff
(99.3 %id)
DA217381 brain .m 1 to 478 8 to 486 D53G G54W R55K E56G E57G ... tiling clone, capped   485/485
(100 %)
1 diff
(99.8 %id)
DB493204 hypothalamus .m 3 to 426 1 to 424 exact     424/424
(100 %)
0 diff
(100 %id)
CN257055 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .m 58 to 709 1 to 652   tiling clone,   652/652
(100 %)
3 diff
(99.6 %id)
127 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u, .f, .g, .h, .i, .j-u, .k-u, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI