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Gene SERAC1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
149 supporting clones for gene SERAC1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC001705 Eye, retinoblastoma .a 1 to 3905 9 to 3913 S543T tiling clone, available from MGC, AAA   3913/3913
(100 %)
2 diff
(100.0 %id)
DA394918 thalamus .a 1 to 589 9 to 597   capped   596/596
(100 %)
1 diff
(99.9 %id)
DA335173 hippocampus .a 1 to 581 7 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
BX419153 brain, fetal brain .a 1 to 946 2 to 947       947/947
(100 %)
1 diff
(99.9 %id)
DA335875 hippocampus .a 1 to 607 2 to 608   capped   607/607
(100 %)
1 diff
(99.9 %id)
DA402179 thalamus .a 1 to 540 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
BE255786 eye, retinoblastoma .a 13 to 515 1 to 503       503/503
(100 %)
2 diff
(99.7 %id)
DB241488 trachea .a 20 to 619 2 to 602   capped   601/601
(100 %)
2 diff
(99.7 %id)
TI_57233430   .a 52 to 658 21 to 639       619/1209
(51 %)
30 diff
(97.6 %id)
BI906945 leukocyte .a 59 to 658 1 to 612   available from MGC,   612/1182
(51 %)
25 diff
(97.9 %id)
DB285273 uterus .a 59 to 612 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
CN387676 embryonic stem cells, DMSO-treated H9 cellline .a 77 to 507 1 to 431       431/431
(100 %)
1 diff
(99.8 %id)
AK027823 placenta .a 91 to 2870 132 to 2911 exact tiling clone, available from FLJ,   2911/2911
(100 %)
2 diff
(100.0 %id)
DA232092 brain .a 91 to 523 142 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA335595 hippocampus .a 91 to 556 135 to 600   capped   599/599
(100 %)
4 diff
(99.4 %id)
CN387677 embryonic stem cells, cell lines H1, H7, andH9 .a 91 to 619 106 to 635       635/635
(100 %)
2 diff
(99.7 %id)
DA471134   .a 91 to 521 132 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
BP247151 Kidney .a 91 to 554 119 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BI753075 brain .a 91 to 624 117 to 655       655/755
(86 %)
12 diff
(98.5 %id)
BC060795 Brain, hippocampus .a 91 to 3905 132 to 3945 L193S L194P P195T P196T P197S ... tiling clone, available from MGC, AAA   3945/3945
(100 %)
7 diff
(99.9 %id)
BI545645 brain, hippocampus .a 91 to 680 137 to 741   available from MGC,   741/742
(99 %)
33 diff
(95.6 %id)
TI_57217764   .a 91 to 624 151 to 689       660/789
(83 %)
18 diff
(97.8 %id)
TI_44165725   .a 91 to 680 221 to 825       736/826
(89 %)
34 diff
(95.9 %id)
NM_032861.3   .a 91 to 3918 142 to 3969 exact RefSeq,   3969/3969
(100 %)
0 diff
(100 %id)
DA717601   .a 91 to 515 118 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
DA725327   .a 91 to 535 118 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA831460 placenta .a 91 to 630 132 to 673   capped   672/680
(98 %)
7 diff
(99.0 %id)
DA989028 synovial membrane tissue from rheumatioidarthritis .a 91 to 541 132 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DB261451 uterus .a 91 to 519 132 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
EL735909 mixed .a 92 to 746 1 to 655       655/655
(100 %)
2 diff
(99.7 %id)
TI_1948226321   .a 92 to 1107 121 to 1131       1009/1269
(79 %)
55 diff
(95.7 %id)
TI_1948226322   .a 92 to 701 123 to 735       613/1203
(50 %)
12 diff
(99.1 %id)
TI_1948226564   .a 92 to 956 123 to 987       865/1331
(64 %)
17 diff
(98.8 %id)
TI_1948226565   .a 92 to 803 120 to 836       717/1161
(61 %)
23 diff
(98.1 %id)
TI_1948226812   .a 92 to 980 122 to 1013       892/1343
(66 %)
21 diff
(98.5 %id)
TI_1948226813   .a 92 to 701 121 to 733       613/1209
(50 %)
11 diff
(99.1 %id)
TI_1948227053   .a 92 to 948 125 to 984       860/1377
(62 %)
25 diff
(98.2 %id)
TI_1948227054   .a 92 to 586 124 to 618       495/1297
(38 %)
16 diff
(98.8 %id)
DB034983 testis .a 103 to 646 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
CN387675 embryonic stem cells, cell lines H1, H7, andH9 .a 284 to 915 1 to 632       632/632
(100 %)
1 diff
(99.9 %id)
DA661622   .a 357 to 933 2 to 578   capped   577/581
(99 %)
2 diff
(99.7 %id)
DA183321 amygdala .a 468 to 1027 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA535612 heart .a 596 to 1192 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA723897   .a 596 to 1169 2 to 575   capped   574/574
(100 %)
2 diff
(99.7 %id)
BI118077 lung, small cell carcinoma .a 679 to 1383 1 to 709       709/709
(100 %)
10 diff
(98.6 %id)
BF110690 carcinoid, lung .a 681 to 1097 1 to 417     Submitted on the opposite strand 417/417
(100 %)
0 diff
(100 %id)
CN425872 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 690 to 1349 10 to 670       661/670
(98 %)
1 diff
(99.9 %id)
BF802170 colon_ins .a 695 to 1061 97 to 475       390/475
(82 %)
57 diff
(88.0 %id)
BU157257 adenocarcinoma, Pancreas .a 696 to 1580 1 to 883       883/921
(95 %)
12 diff
(98.7 %id)
DA957552 Spleen .a 743 to 1307 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BM046657 carcinoma, cell line, Prostate .a 756 to 1545 1 to 808       802/992
(80 %)
41 diff
(95.9 %id)
DA211030 brain .a 768 to 1329 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA599983   .a 777 to 1340 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB076921 testis .a 777 to 1324 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA268923 caudate nucleus .a 778 to 1332 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA742749   .a 781 to 1329 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
F00318 leg muscle, skeletal muscle .a 959 to 1205 1 to 247       247/247
(100 %)
1 diff
(99.6 %id)
Z25274 leg muscle, skeletal muscle .a 964 to 1216 254 to 2       253/265
(95 %)
2 diff
(99.3 %id)
BI818198 pooled brain, lung, testis .a 1009 to 1694 1 to 691       691/691
(100 %)
12 diff
(98.3 %id)
TI_57196188   .a 1009 to 1694 30 to 720       691/720
(95 %)
17 diff
(97.7 %id)
DA712915   .a 1015 to 1529 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
DB077266 testis .a 1034 to 1597 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
CF272722   .a 1048 to 1395 1 to 348       348/348
(100 %)
2 diff
(99.5 %id)
TI_1948226324   .a 1098 to 2055 1085 to 124       962/1272
(75 %)
32 diff
(97.5 %id)
TI_1948226815   .a 1106 to 2055 1071 to 123       949/1284
(73 %)
27 diff
(97.9 %id)
TI_1948226567   .a 1169 to 2055 1020 to 124       897/1350
(66 %)
26 diff
(98.1 %id)
AA148416 uterus .a 1238 to 1680 1 to 442       442/442
(100 %)
4 diff
(99.1 %id)
DA494719 brain .a 1244 to 1818 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
TI_1948227056   .a 1268 to 2055 877 to 83       795/1331
(59 %)
14 diff
(99.0 %id)
DA087515 cerebellum .a 1269 to 1840 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
BQ002844 Chondrosarcoma, Left Pelvis .a 1398 to 2098 716 to 16   AAA   701/705
(99 %)
1 diff
(99.9 %id)
DA080234 cerebellum .a 1450 to 2014 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
TI_1948226814   .a 1486 to 2055 747 to 179       569/1243
(45 %)
11 diff
(99.2 %id)
TI_1948226323   .a 1507 to 2055 675 to 126       550/1205
(45 %)
22 diff
(98.2 %id)
TI_1948226566   .a 1543 to 2055 631 to 119       513/1192
(43 %)
9 diff
(99.3 %id)
CX755411 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1597 to 2333 39 to 776     Submitted on the opposite strand 738/777
(94 %)
25 diff
(96.8 %id)
DB525343 testis .a 1658 to 2098 1 to 441     Submitted on the opposite strand 441/441
(100 %)
1 diff
(99.8 %id)
BP336412 coronary artery .a 1821 to 2406 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
DB274696 uterus .a 1871 to 2429 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
AK023656 placenta .a 1914 to 3901 1 to 1988   available from FLJ,   1988/1988
(100 %)
3 diff
(99.9 %id)
AU138904 placenta .a 1915 to 2617 2 to 707   capped   706/736
(95 %)
8 diff
(99.0 %id)
TI_154110632   .a 1969 to 2866 910 to 29   AAA   882/959
(91 %)
20 diff
(98.0 %id)
BQ182984 Chondrosarcoma, Left Pubic Bone .a 2134 to 2866 748 to 19   AAA   730/730
(100 %)
3 diff
(99.6 %id)
CK904864 Islets of Langerhans, Pancreas .a 2272 to 2846 1 to 575       575/575
(100 %)
0 diff
(100 %id)
AI968181 pooled germ cell tumors .a 2274 to 2869 604 to 9       596/604
(98 %)
0 diff
(100 %id)
BM055231 Islets of Langerhans, Pancreas .a 2288 to 2843 1 to 556       556/556
(100 %)
4 diff
(99.3 %id)
CK904863 Islets of Langerhans, Pancreas .a 2310 to 2871 569 to 8       562/569
(98 %)
0 diff
(100 %id)
DA625047 Kidney .a 2324 to 2870 2 to 548   capped, AAA   547/547
(100 %)
0 diff
(100 %id)
DB377133 placenta .a 2376 to 2870 493 to 1       493/519
(94 %)
6 diff
(98.9 %id)
AW594019 pooled germ cell tumors .a 2383 to 2869 495 to 9       487/495
(98 %)
0 diff
(100 %id)
FN114999 breast carcinoma .a 2416 to 2530 115 to 1     Submitted on the opposite strand 115/115
(100 %)
0 diff
(100 %id)
BM054977 Islets of Langerhans, Pancreas .a 2524 to 2871 355 to 8       348/355
(98 %)
0 diff
(100 %id)
AI039171   .a 2530 to 2871 344 to 3       342/344
(99 %)
0 diff
(100 %id)
AI221992 pooled .a 2539 to 2871 336 to 4       333/336
(99 %)
0 diff
(100 %id)
T87609 liver and spleen .a 2546 to 2841 1 to 300       300/309
(97 %)
4 diff
(98.8 %id)
AA148417 uterus .a 2560 to 2864 309 to 4       306/412
(74 %)
0 diff
(100 %id)
BF670370 muscle (skeletal) .a 2720 to 3233 1 to 515       515/515
(100 %)
6 diff
(98.9 %id)
BM129638 Islets of Langerhans, Pancreas .a 2796 to 3359 1 to 564   fully sequenced,   564/564
(100 %)
2 diff
(99.7 %id)
BM129791 Islets of Langerhans, Pancreas .a 2796 to 3362 1 to 567   fully sequenced,   567/567
(100 %)
1 diff
(99.9 %id)
AA206368   .a 3025 to 3773 767 to 31       737/769
(95 %)
6 diff
(99.3 %id)
AA128977   .a 3030 to 3168 1 to 139       139/139
(100 %)
0 diff
(100 %id)
BX434908 brain, fetal brain .a 3054 to 3873 837 to 7       831/903
(92 %)
0 diff
(100 %id)
AI262131 Kidney .a 3143 to 3901 759 to 1       759/759
(100 %)
9 diff
(98.9 %id)
AA636035 normal prostate, Prostate .a 3230 to 3715 483 to 1       483/483
(100 %)
12 diff
(97.6 %id)
BG990515 head_neck .a 3231 to 3469 3 to 237       235/242
(97 %)
17 diff
(93.0 %id)
BM129353 Islets of Langerhans, Pancreas .a 3329 to 3901 573 to 1   fully sequenced,   573/573
(100 %)
0 diff
(100 %id)
BM129495 Islets of Langerhans, Pancreas .a 3332 to 3901 569 to 1   fully sequenced,   569/569
(100 %)
1 diff
(99.9 %id)
ES310152 scalp interfollicular dermis, skin .a 3338 to 3907 584 to 19     Submitted on the opposite strand 566/758
(74 %)
0 diff
(100 %id)
AW236925 pooled germ cell tumors .a 3353 to 3901 549 to 1       549/549
(100 %)
0 diff
(100 %id)
AA598967   .a 3362 to 3715 375 to 22   AAA   354/354
(100 %)
0 diff
(100 %id)
AI935591 Kidney .a 3378 to 3901 524 to 1       524/528
(99 %)
4 diff
(99.3 %id)
AW844086 colon_normal .a 3431 to 3630 4 to 203       200/327
(61 %)
4 diff
(98.8 %id)
AI140856 heart .a 3446 to 3903 458 to 1       458/458
(100 %)
0 diff
(100 %id)
AU157808 placenta .a 3458 to 3901 443 to 1       443/454
(97 %)
3 diff
(99.4 %id)
AI752934 bone marrow stroma .a 3461 to 3901 472 to 31   AAA   442/442
(100 %)
1 diff
(99.8 %id)
AI128567 heart .a 3539 to 3901 363 to 1       363/363
(100 %)
0 diff
(100 %id)
AI983301 pooled germ cell tumors .a 3619 to 3898 280 to 1       280/280
(100 %)
4 diff
(98.6 %id)
H15793 whole brain .a 3636 to 3885 262 to 3       260/265
(98 %)
0 diff
(100 %id)
AA128978   .a 3712 to 3918 207 to 1       207/207
(100 %)
0 diff
(100 %id)
EC462802 Prostate .a 3816 to 3900 1 to 85       85/89
(95 %)
4 diff
(95.6 %id)
DA194203 amygdala .b 91 to 564 108 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
DA318474 hippocampus .b 91 to 544 108 to 561   tiling clone, capped   560/560
(100 %)
1 diff
(99.9 %id)
BX648104 human testis .b 91 to 5135 111 to 5156 exact tiling clone, available from DKFZ, AAA   5153/5153
(100 %)
9 diff
(99.9 %id)
DB462207 testis .b 91 to 443 116 to 469       469/469
(100 %)
3 diff
(99.4 %id)
DR002901 fetal brain .b 91 to 553 128 to 590       590/590
(100 %)
8 diff
(98.7 %id)
DB234199 trachea .b 91 to 549 118 to 576   capped   575/576
(99 %)
6 diff
(99.0 %id)
DB132532 thymus .b 1869 to 2401 2 to 534   tiling clone, capped   533/533
(100 %)
1 diff
(99.9 %id)
BG007378 placenta_normal .b 2815 to 3321 1 to 507       507/507
(100 %)
0 diff
(100 %id)
DB344729 thymus .b 3722 to 4280 560 to 1       560/560
(100 %)
3 diff
(99.5 %id)
BC048335 Blood, adult leukocytes .c 1 to 1825 1 to 1825 exact tiling clone, available from MGC, AAA   1825/1825
(100 %)
1 diff
(100.0 %id)
DA424236   .c 539 to 1107 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AA973010 pooled .c 1228 to 1606 381 to 3       379/381
(99 %)
0 diff
(100 %id)
DB527644 testis .c 1396 to 1822 1 to 455     Submitted on the opposite strand 455/455
(100 %)
6 diff
(98.7 %id)
DB507998 testis .c 1434 to 1822 1 to 414     Submitted on the opposite strand 414/414
(100 %)
13 diff
(96.9 %id)
AK125878 testis .d 1 to 4034 2 to 4038   tiling clone, available from FLJ,   4038/4038
(100 %)
4 diff
(100.0 %id)
DB067698 testis .d 1 to 574 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
D81669 brain .d 192 to 414 1 to 224       224/224
(100 %)
6 diff
(97.4 %id)
CN281344 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 207 to 809 32 to 636       605/636
(95 %)
6 diff
(99.1 %id)
DB339870 testis .d 3477 to 4034 558 to 1       558/558
(100 %)
1 diff
(99.9 %id)
BX409727 brain, fetal brain .e 1 to 890 3 to 891   tiling clone,   889/891
(99 %)
17 diff
(98.1 %id)
BX409726 brain, fetal brain .e 1 to 715 3 to 718   tiling clone,   718/866
(82 %)
5 diff
(99.5 %id)
DA102332 cerebellum .e 620 to 1205 2 to 588   tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
DB062959 testis .e 797 to 1348 2 to 553   tiling clone, capped   552/552
(100 %)
0 diff
(100 %id)
AA928122 pooled .f 1 to 507 509 to 3 Y153* tiling clone,   507/509
(99 %)
0 diff
(100 %id)
BG720841 testis .g 294 to 509 325 to 558 exact tiling clone, available from MGC,   528/732
(72 %)
50 diff
(93.2 %id)
BX280760 pooled germ cell tumors .h-u 1 to 504 1 to 505 A4S L5T N6K H7S Y9L ... tiling clone,   505/505
(100 %)
4 diff
(99.3 %id)
DB459899 testis .i 1 to 449 1 to 450 K41Q I42D L43T R44A N45E ... tiling clone,   450/450
(100 %)
2 diff
(99.6 %id)
AW102849 ovary, tumor, 5 pooled (see description) .j-u 1 to 431 431 to 1 exact tiling clone,   431/431
(100 %)
0 diff
(100 %id)
AI989684 pooled germ cell tumors .k 1 to 405 405 to 1 T19P tiling clone,   405/405
(100 %)
4 diff
(99.1 %id)
DB443071 testis Gene SERAC1, variant not shown         Suspected internal deletion, this clone was ignored    
BC028594 testis Gene SERAC1, variant not shown       available from MGC, AAA This clone was ignored    
DA690874   Gene SERAC1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB024900 testis Gene SERAC1, variant not shown       capped This clone was ignored    
DB035920 testis Gene SERAC1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB046171 testis Gene SERAC1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB135297 thymus Gene SERAC1, variant not shown       capped      
DB344941 thymus Gene SERAC1, variant not shown              
DB282947 uterus Gene SERAC1, variant not shown       capped      
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C