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Gene SDHAP2andMUC20TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
812 supporting clones for gene SDHAP2andMUC20 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC348309 tongue, tumor tissue SDHAP2andMUC20.a 1 to 563 1 to 563   tiling clone,   563/563
(100 %)
2 diff
(99.7 %id)
DC361439 Kidney SDHAP2andMUC20.a 1 to 594 1 to 595       595/595
(100 %)
3 diff
(99.5 %id)
DC361506 Kidney SDHAP2andMUC20.a 1 to 547 1 to 547       547/547
(100 %)
4 diff
(99.3 %id)
DC382495 placenta SDHAP2andMUC20.a 3 to 579 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
DR004582 placenta SDHAP2andMUC20.a 29 to 696 1 to 665       665/665
(100 %)
7 diff
(99.0 %id)
BP272408   SDHAP2andMUC20.a 59 to 656 1 to 598       598/598
(100 %)
8 diff
(98.7 %id)
DC300867 bladder SDHAP2andMUC20.a 62 to 624 1 to 565       565/566
(99 %)
5 diff
(99.2 %id)
DC346920 tongue, tumor tissue SDHAP2andMUC20.a 62 to 637 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC361670 Kidney SDHAP2andMUC20.a 62 to 612 1 to 551       551/551
(100 %)
4 diff
(99.3 %id)
DC383908 Prostate SDHAP2andMUC20.a 62 to 642 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
DC345003 colon SDHAP2andMUC20.a 63 to 632 1 to 570       570/570
(100 %)
2 diff
(99.7 %id)
DC347433 tongue, tumor tissue SDHAP2andMUC20.a 63 to 627 1 to 566       566/566
(100 %)
3 diff
(99.5 %id)
DC359196 lung SDHAP2andMUC20.a 63 to 618 1 to 556       556/556
(100 %)
4 diff
(99.3 %id)
BP275644 Kidney SDHAP2andMUC20.a 63 to 571 1 to 508       508/582
(87 %)
18 diff
(97.0 %id)
DC361578 Kidney SDHAP2andMUC20.a 63 to 604 1 to 542       542/542
(100 %)
2 diff
(99.7 %id)
DC380410 placenta SDHAP2andMUC20.a 63 to 623 1 to 561       561/561
(100 %)
3 diff
(99.5 %id)
DC404665 thymus SDHAP2andMUC20.a 63 to 622 1 to 560       560/560
(100 %)
2 diff
(99.7 %id)
DC413957 trachea SDHAP2andMUC20.a 63 to 622 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BM838902 Ascites, stomach SDHAP2andMUC20.a 65 to 555 9 to 499       491/491
(100 %)
6 diff
(98.8 %id)
DC394016 esophageal, tumor tissue SDHAP2andMUC20.a 66 to 642 1 to 577       577/577
(100 %)
6 diff
(99.0 %id)
DC345120 colon SDHAP2andMUC20.a 68 to 646 1 to 579       579/579
(100 %)
6 diff
(99.0 %id)
DC345266 colon SDHAP2andMUC20.a 68 to 644 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
DC345291 colon SDHAP2andMUC20.a 68 to 644 1 to 577       577/577
(100 %)
4 diff
(99.4 %id)
DC414392 trachea SDHAP2andMUC20.a 68 to 653 1 to 586       586/586
(100 %)
2 diff
(99.7 %id)
DB014828 esophageal, tumor tissue SDHAP2andMUC20.a 69 to 509 2 to 442   capped   441/441
(100 %)
1 diff
(99.8 %id)
DC406152 thymus SDHAP2andMUC20.a 69 to 604 1 to 536       536/536
(100 %)
4 diff
(99.3 %id)
DC347250 tongue, tumor tissue SDHAP2andMUC20.a 70 to 622 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
BM836116 Ascites, stomach SDHAP2andMUC20.a 70 to 362 1 to 292       292/292
(100 %)
2 diff
(99.4 %id)
BM837186 Ascites, stomach SDHAP2andMUC20.a 70 to 622 1 to 554       554/554
(100 %)
6 diff
(99.0 %id)
DC387812 small intestine SDHAP2andMUC20.a 70 to 635 1 to 566       566/566
(100 %)
5 diff
(99.2 %id)
DA832198 placenta SDHAP2andMUC20.a 71 to 819 2 to 756   capped   755/756
(99 %)
21 diff
(97.3 %id)
DC414716 trachea SDHAP2andMUC20.a 72 to 649 1 to 578       578/578
(100 %)
4 diff
(99.4 %id)
DA449235 tongue, tumor tissue SDHAP2andMUC20.a 74 to 520 10 to 456   capped   447/556
(80 %)
1 diff
(99.9 %id)
CD709108 normal nasopharynx SDHAP2andMUC20.a 83 to 669 22 to 608       587/609
(96 %)
15 diff
(97.6 %id)
DC393798 esophageal, tumor tissue SDHAP2andMUC20.a 83 to 622 1 to 540       540/540
(100 %)
2 diff
(99.7 %id)
DC385377 rectum SDHAP2andMUC20.a 86 to 622 1 to 538       538/538
(100 %)
3 diff
(99.5 %id)
DC414862 trachea SDHAP2andMUC20.a 87 to 643 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
DC405606 thymus SDHAP2andMUC20.a 88 to 667 1 to 578       578/578
(100 %)
5 diff
(99.2 %id)
BM750883 Ascites, stomach SDHAP2andMUC20.a 90 to 550 1 to 461       461/461
(100 %)
6 diff
(98.7 %id)
DA622509 Kidney SDHAP2andMUC20.a 91 to 627 2 to 538   capped   537/537
(100 %)
2 diff
(99.7 %id)
BP221492 colon SDHAP2andMUC20.a 94 to 661 1 to 568       568/568
(100 %)
7 diff
(98.8 %id)
BP252006 Kidney SDHAP2andMUC20.a 94 to 665 1 to 572       572/572
(100 %)
17 diff
(97.1 %id)
BM786283 Ascites, stomach SDHAP2andMUC20.a 94 to 759 1 to 666       666/666
(100 %)
4 diff
(99.4 %id)
DB196583 trachea SDHAP2andMUC20.a 94 to 622 2 to 530   capped   529/529
(100 %)
5 diff
(99.1 %id)
DA425381 colon SDHAP2andMUC20.a 95 to 635 2 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
DA843251 placenta SDHAP2andMUC20.a 95 to 656 2 to 563   capped   562/564
(99 %)
3 diff
(99.5 %id)
DB203088 trachea SDHAP2andMUC20.a 95 to 677 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
BP264319 small intestine SDHAP2andMUC20.a 97 to 680 1 to 585       585/588
(99 %)
8 diff
(98.7 %id)
BM751243 Ascites, stomach SDHAP2andMUC20.a 97 to 641 1 to 547       547/547
(100 %)
7 diff
(98.8 %id)
BP355345   SDHAP2andMUC20.a 97 to 680 1 to 584       584/584
(100 %)
7 diff
(98.9 %id)
BP223895 colon mucosa SDHAP2andMUC20.a 98 to 778 1 to 682       682/685
(99 %)
22 diff
(96.8 %id)
DA431996 colon SDHAP2andMUC20.a 98 to 635 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DA437251 tongue, tumor tissue SDHAP2andMUC20.a 98 to 694 2 to 598   capped   597/597
(100 %)
4 diff
(99.4 %id)
DA437846 tongue, tumor tissue SDHAP2andMUC20.a 98 to 665 2 to 570   capped   569/569
(100 %)
7 diff
(98.8 %id)
DA439429 tongue, tumor tissue SDHAP2andMUC20.a 98 to 674 2 to 578   capped   577/577
(100 %)
5 diff
(99.2 %id)
DA441563 tongue, tumor tissue SDHAP2andMUC20.a 98 to 680 2 to 584   capped   583/583
(100 %)
4 diff
(99.4 %id)
DA448903 tongue, tumor tissue SDHAP2andMUC20.a 98 to 635 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DA452675 tongue, tumor tissue SDHAP2andMUC20.a 98 to 660 2 to 564   capped   563/563
(100 %)
7 diff
(98.8 %id)
DA460965 tongue, tumor tissue SDHAP2andMUC20.a 98 to 669 2 to 575   capped   574/575
(99 %)
6 diff
(99.0 %id)
DA570217 whole embryo, mainly head SDHAP2andMUC20.a 98 to 814 2 to 719   tiling clone, capped   718/739
(97 %)
9 diff
(98.8 %id)
DA621375 Kidney SDHAP2andMUC20.a 98 to 654 2 to 559   capped   558/558
(100 %)
5 diff
(99.2 %id)
DA622827 Kidney SDHAP2andMUC20.a 98 to 622 2 to 528   capped   527/527
(100 %)
7 diff
(98.7 %id)
DA623264 Kidney SDHAP2andMUC20.a 98 to 656 2 to 561   capped   560/560
(100 %)
5 diff
(99.2 %id)
DA627277 Kidney SDHAP2andMUC20.a 98 to 634 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
DA629160 Kidney SDHAP2andMUC20.a 98 to 665 2 to 570   capped   569/569
(100 %)
5 diff
(99.2 %id)
DA668929 esophagus SDHAP2andMUC20.a 98 to 652 2 to 561   capped   560/560
(100 %)
9 diff
(98.4 %id)
DA846245 placenta SDHAP2andMUC20.a 98 to 658 2 to 562   capped   561/561
(100 %)
4 diff
(99.3 %id)
DA891219 rectum SDHAP2andMUC20.a 98 to 664 2 to 569   capped   568/568
(100 %)
5 diff
(99.2 %id)
BM752310 Ascites, stomach SDHAP2andMUC20.a 98 to 624 1 to 526       526/526
(100 %)
7 diff
(98.7 %id)
DB003003 breast, tumor tissue SDHAP2andMUC20.a 98 to 634 2 to 539   capped   538/538
(100 %)
3 diff
(99.5 %id)
DB208868 trachea SDHAP2andMUC20.a 98 to 627 2 to 534   capped   533/533
(100 %)
7 diff
(98.7 %id)
DB209562 trachea SDHAP2andMUC20.a 98 to 643 2 to 549   capped   548/548
(100 %)
5 diff
(99.1 %id)
DB209984 trachea SDHAP2andMUC20.a 98 to 622 2 to 526   capped   525/525
(100 %)
3 diff
(99.5 %id)
DB241921 stomach, tumor tissue SDHAP2andMUC20.a 98 to 578 2 to 484   capped   483/483
(100 %)
4 diff
(99.2 %id)
BE514890 adenocarcinoma cell line, ovary SDHAP2andMUC20.a 99 to 789 1 to 684       684/740
(92 %)
17 diff
(97.8 %id)
DA871413 Prostate SDHAP2andMUC20.a 102 to 644 2 to 547   capped   546/546
(100 %)
3 diff
(99.5 %id)
CD705278 normal nasopharynx SDHAP2andMUC20.a 103 to 655 34 to 586       553/586
(94 %)
8 diff
(98.7 %id)
CD708284 normal nasopharynx SDHAP2andMUC20.a 103 to 557 22 to 479       458/479
(95 %)
11 diff
(97.8 %id)
BG468805 adenocarcinoma cell line, colon SDHAP2andMUC20.a 105 to 676 1 to 592       592/592
(100 %)
22 diff
(96.3 %id)
BX480263   SDHAP2andMUC20.a 124 to 704 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
CV030288 mixed SDHAP2andMUC20.a 127 to 751 1 to 625       625/625
(100 %)
6 diff
(99.1 %id)
EL734471 mixed SDHAP2andMUC20.a 127 to 804 1 to 678       678/678
(100 %)
4 diff
(99.5 %id)
TI_1948139119   SDHAP2andMUC20.a 127 to 880 124 to 883       760/1290
(58 %)
31 diff
(97.6 %id)
BM848603 myeloma SDHAP2andMUC20.a 131 to 363 1 to 233       233/233
(100 %)
1 diff
(99.6 %id)
AW603958 colon SDHAP2andMUC20.a 137 to 782 1 to 646       646/646
(100 %)
9 diff
(98.7 %id)
AW603959 colon SDHAP2andMUC20.a 137 to 574 1 to 438       399/438
(91 %)
18 diff
(95.9 %id)
AW603961 colon SDHAP2andMUC20.a 137 to 621 1 to 485       485/485
(100 %)
7 diff
(98.6 %id)
BM721408 eye, fetal eye SDHAP2andMUC20.a 173 to 954 1 to 780   tiling clone, Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 780/780
(100 %)
4 diff
(99.5 %id)
BU785767 Pancreas, Purified pancreatic islet SDHAP2andMUC20.a 337 to 778 1 to 442       442/442
(100 %)
4 diff
(99.1 %id)
DA624205 Kidney SDHAP2andMUC20.a 382 to 789 2 to 410   capped   409/409
(100 %)
7 diff
(98.3 %id)
BI052813 placenta_normal SDHAP2andMUC20.a 498 to 697 14 to 216       203/219
(92 %)
11 diff
(95.0 %id)
BQ329310 lung_normal SDHAP2andMUC20.a 1157 to 1461 318 to 15   tiling clone,   304/323
(94 %)
0 diff
(100 %id)
BF819488 kidney_tumor SDHAP2andMUC20.a 1185 to 1678 13 to 511   tiling clone,   499/511
(97 %)
6 diff
(98.9 %id)
AA366320 Pancreas SDHAP2andMUC20.a 1204 to 1371 1 to 168   tiling clone,   168/168
(100 %)
0 diff
(100 %id)
AW750746 colon_normal SDHAP2andMUC20.a 1220 to 1449 20 to 255       236/261
(90 %)
16 diff
(93.9 %id)
AA135276 colon, tumor SDHAP2andMUC20.a 1227 to 1534 1 to 309   tiling clone,   309/309
(100 %)
9 diff
(97.1 %id)
BM705611 eye, lens SDHAP2andMUC20.a 1289 to 1666 1 to 378     Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 378/378
(100 %)
5 diff
(98.7 %id)
AA101929 colon, tumor SDHAP2andMUC20.a 1338 to 1745 1 to 412       412/412
(100 %)
9 diff
(97.9 %id)
CB132230 Liver SDHAP2andMUC20.a 1374 to 1913 1 to 540       540/540
(100 %)
10 diff
(98.2 %id)
CB142021 Liver SDHAP2andMUC20.a 1374 to 1757 1 to 384       384/384
(100 %)
8 diff
(98.0 %id)
BF822599 kidney_tumor SDHAP2andMUC20.a 1407 to 1837 431 to 1     Submitted on the opposite strand 431/431
(100 %)
10 diff
(97.7 %id)
CB129033 Liver SDHAP2andMUC20.a 1411 to 1977 1 to 567       567/567
(100 %)
9 diff
(98.5 %id)
BM697386 eye, lens SDHAP2andMUC20.a 1414 to 2008 1 to 595   tiling clone, Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 595/595
(100 %)
0 diff
(100 %id)
TI_1948213555   SDHAP2andMUC20.a 1425 to 2261 960 to 122       839/1278
(65 %)
20 diff
(98.5 %id)
BF819735 kidney_tumor SDHAP2andMUC20.a 1433 to 1997 9 to 568       560/581
(96 %)
15 diff
(97.5 %id)
BF822589 kidney_tumor SDHAP2andMUC20.a 1436 to 1802 22 to 389       368/389
(94 %)
6 diff
(98.5 %id)
BF819590 kidney_tumor SDHAP2andMUC20.a 1441 to 1864 429 to 4     Submitted on the opposite strand 426/429
(99 %)
0 diff
(100 %id)
BF819602 kidney_tumor SDHAP2andMUC20.a 1441 to 1864 1 to 425       425/431
(98 %)
8 diff
(98.2 %id)
BF819733 kidney_tumor SDHAP2andMUC20.a 1441 to 1852 1 to 412       412/412
(100 %)
4 diff
(99.1 %id)
BF819737 kidney_tumor SDHAP2andMUC20.a 1441 to 2017 1 to 576       576/576
(100 %)
8 diff
(98.7 %id)
BF819738 kidney_tumor SDHAP2andMUC20.a 1441 to 1853 413 to 1     Submitted on the opposite strand 413/413
(100 %)
4 diff
(99.1 %id)
BF819739 kidney_tumor SDHAP2andMUC20.a 1441 to 1854 415 to 1     Submitted on the opposite strand 415/415
(100 %)
4 diff
(99.1 %id)
BF819736 kidney_tumor SDHAP2andMUC20.a 1442 to 1934 1 to 493       493/493
(100 %)
6 diff
(98.8 %id)
TI_1948138809   SDHAP2andMUC20.a 1454 to 2261 917 to 124       794/1272
(62 %)
43 diff
(96.7 %id)
BQ331857 lung_tumor SDHAP2andMUC20.a 1475 to 2064 1 to 585       585/597
(97 %)
21 diff
(96.5 %id)
BF773151 epid_tumor SDHAP2andMUC20.a 1479 to 1857 379 to 1     Submitted on the opposite strand 379/379
(100 %)
10 diff
(97.4 %id)
BF822668 kidney_tumor SDHAP2andMUC20.a 1479 to 1857 379 to 1     Submitted on the opposite strand 379/379
(100 %)
10 diff
(97.4 %id)
BF773143 epid_tumor SDHAP2andMUC20.a 1494 to 1853 15 to 372       358/372
(96 %)
6 diff
(98.4 %id)
BF822660 kidney_tumor SDHAP2andMUC20.a 1494 to 1853 15 to 372       358/372
(96 %)
6 diff
(98.4 %id)
TI_1948138510   SDHAP2andMUC20.a 1499 to 2261 879 to 119       761/1308
(58 %)
27 diff
(98.0 %id)
TI_1948139122   SDHAP2andMUC20.a 1505 to 2261 875 to 123       753/1365
(55 %)
57 diff
(95.9 %id)
BF921927 nervous_tumor SDHAP2andMUC20.a 1507 to 1678 16 to 187       172/187
(91 %)
8 diff
(95.8 %id)
AW351801 colon SDHAP2andMUC20.a 1513 to 1710 198 to 1       198/207
(95 %)
10 diff
(95.2 %id)
TI_1948138808   SDHAP2andMUC20.a 1514 to 2261 853 to 106       748/1253
(59 %)
35 diff
(97.3 %id)
BF772865 epid_tumor SDHAP2andMUC20.a 1515 to 2019 1 to 505       505/505
(100 %)
7 diff
(98.7 %id)
BF921922 nervous_tumor SDHAP2andMUC20.a 1515 to 1682 181 to 16     Submitted on the opposite strand 166/181
(91 %)
0 diff
(100 %id)
BF921923 nervous_tumor SDHAP2andMUC20.a 1515 to 1770 270 to 19     Submitted on the opposite strand 252/270
(93 %)
0 diff
(100 %id)
TI_1948139121   SDHAP2andMUC20.a 1523 to 2261 838 to 106       733/1292
(56 %)
12 diff
(99.1 %id)
AW752282 colon SDHAP2andMUC20.a 1527 to 1822 297 to 1       297/297
(100 %)
5 diff
(98.4 %id)
BF822628 kidney_tumor SDHAP2andMUC20.a 1532 to 1853 5 to 325       321/325
(98 %)
6 diff
(98.2 %id)
BF921918 nervous_tumor SDHAP2andMUC20.a 1533 to 1678 1 to 143       143/143
(100 %)
12 diff
(91.7 %id)
BF822577 kidney_tumor SDHAP2andMUC20.a 1535 to 1857 347 to 25     Submitted on the opposite strand 323/347
(93 %)
0 diff
(100 %id)
BF821487 kidney_tumor SDHAP2andMUC20.a 1541 to 2017 488 to 15     Submitted on the opposite strand 474/488
(97 %)
0 diff
(100 %id)
TI_149313638   SDHAP2andMUC20.a 1554 to 2539 1068 to 95   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 974/977
(99 %)
16 diff
(98.4 %id)
TI_1948138511   SDHAP2andMUC20.a 1565 to 2261 818 to 127       692/1361
(50 %)
31 diff
(97.8 %id)
TI_1948138217   SDHAP2andMUC20.a 1574 to 2261 801 to 116       686/1205
(56 %)
13 diff
(99.0 %id)
AW351818 colon SDHAP2andMUC20.a 1616 to 1886 270 to 3       268/270
(99 %)
0 diff
(100 %id)
BF819740 kidney_tumor SDHAP2andMUC20.a 1616 to 2149 547 to 14     Submitted on the opposite strand 534/550
(97 %)
11 diff
(98.0 %id)
CB147536 Liver SDHAP2andMUC20.a 1630 to 2160 1 to 531       531/531
(100 %)
9 diff
(98.4 %id)
CB142383 Liver SDHAP2andMUC20.a 1630 to 2081 1 to 452       452/452
(100 %)
10 diff
(97.8 %id)
BM820502 stomach SDHAP2andMUC20.a 1638 to 2054 1 to 417       417/417
(100 %)
0 diff
(100 %id)
BF851703 lung_normal SDHAP2andMUC20.a 1693 to 2094 410 to 8     Submitted on the opposite strand 403/410
(98 %)
0 diff
(100 %id)
TI_1948138218   SDHAP2andMUC20.a 1704 to 2261 683 to 126       558/1460
(38 %)
10 diff
(99.4 %id)
BF821533 kidney_tumor SDHAP2andMUC20.a 1714 to 1860 1 to 147       147/175
(84 %)
3 diff
(98.3 %id)
BF883124 lung_tumor SDHAP2andMUC20.a 1735 to 2151 40 to 458       419/458
(91 %)
6 diff
(98.7 %id)
BF883707 lung_tumor SDHAP2andMUC20.a 1742 to 2251 520 to 11     Submitted on the opposite strand 510/520
(98 %)
5 diff
(99.1 %id)
AA551538   SDHAP2andMUC20.a 1742 to 2117 1 to 376       376/376
(100 %)
7 diff
(98.2 %id)
AA527939   SDHAP2andMUC20.a 1744 to 2140 1 to 396       396/434
(91 %)
7 diff
(98.4 %id)
BM833477 stomach SDHAP2andMUC20.a 1758 to 2266 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
BE047831 brain, tumor, 5 pooled (see description) SDHAP2andMUC20.a 1769 to 2221 9 to 461       453/461
(98 %)
6 diff
(98.7 %id)
AA570337 liposarcoma SDHAP2andMUC20.a 1813 to 2004 20 to 211       192/211
(90 %)
6 diff
(97.2 %id)
BG983549 colon_normal SDHAP2andMUC20.a 1815 to 2048 147 to 380       234/380
(61 %)
6 diff
(98.5 %id)
TI_149271285   SDHAP2andMUC20.a 1864 to 2590 816 to 93   tiling clone, AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 724/963
(75 %)
16 diff
(98.4 %id)
CB305505 lung, Primary Lung Cystic Fibrosis EpithelialCells SDHAP2andMUC20.a 1877 to 2539 681 to 19   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 663/663
(100 %)
3 diff
(99.6 %id)
BU740479 eye, fetal eye SDHAP2andMUC20.a 1886 to 2588 719 to 19   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 701/701
(100 %)
2 diff
(99.8 %id)
AA133085 colon, tumor SDHAP2andMUC20.a 1920 to 2186 1 to 268   fully sequenced,   268/268
(100 %)
8 diff
(97.1 %id)
BF819734 kidney_tumor SDHAP2andMUC20.a 1937 to 2157 1 to 221       221/221
(100 %)
3 diff
(98.7 %id)
BQ015398 placenta SDHAP2andMUC20.a 1970 to 2587 632 to 18   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 615/615
(100 %)
5 diff
(99.2 %id)
AW084511 colon, colonic mucosa from 3 patients with Crohn'sdisease SDHAP2andMUC20.a 2000 to 2542 545 to 2       544/545
(99 %)
0 diff
(100 %id)
BU674325 lung, Primary Lung Epithelial Cells SDHAP2andMUC20.a 2001 to 2590 606 to 17   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 590/590
(100 %)
0 diff
(100 %id)
DB345562 thymus SDHAP2andMUC20.a 2005 to 2542 538 to 1       538/538
(100 %)
3 diff
(99.5 %id)
DB378257 placenta SDHAP2andMUC20.a 2014 to 2542 527 to 1       527/527
(100 %)
29 diff
(94.5 %id)
DB356966 whole embryo, mainly head SDHAP2andMUC20.a 2023 to 2590 566 to 1       566/574
(98 %)
13 diff
(97.8 %id)
AI921127 adenocarcinoma, Pancreas SDHAP2andMUC20.a 2068 to 2544 477 to 1       477/477
(100 %)
0 diff
(100 %id)
BM987995 mixed SDHAP2andMUC20.a 2073 to 2542 488 to 19   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 470/470
(100 %)
6 diff
(98.8 %id)
AW081362 colon, moderately differentiated adenocarcinoma SDHAP2andMUC20.a 2075 to 2544 475 to 5       471/475
(99 %)
0 diff
(100 %id)
AI826371 normal prostate, Prostate SDHAP2andMUC20.a 2078 to 2543 478 to 12   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 467/467
(100 %)
7 diff
(98.6 %id)
AA101930 colon, tumor SDHAP2andMUC20.a 2091 to 2512 427 to 1       427/438
(97 %)
8 diff
(98.2 %id)
AA633240 colon, colon tumor RER+ SDHAP2andMUC20.a 2099 to 2577 478 to 1       478/478
(100 %)
3 diff
(99.4 %id)
AA135196 colon, tumor SDHAP2andMUC20.a 2109 to 2512 412 to 1       410/412
(99 %)
12 diff
(97.1 %id)
AI991843 colon, colonic mucosa from 3 patients with Crohn'sdisease SDHAP2andMUC20.a 2119 to 2494 377 to 1       377/377
(100 %)
6 diff
(98.5 %id)
BQ015441 placenta SDHAP2andMUC20.a 2119 to 2587 485 to 18   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 468/468
(100 %)
1 diff
(99.8 %id)
AA573892 colon, tumor SDHAP2andMUC20.a 2120 to 2587 470 to 3       468/470
(99 %)
0 diff
(100 %id)
AW438692 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.a 2121 to 2544 424 to 1       424/424
(100 %)
0 diff
(100 %id)
BI017613 lung_tumor SDHAP2andMUC20.a 2125 to 2588 470 to 9       462/470
(98 %)
0 diff
(100 %id)
AA670097 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SDHAP2andMUC20.a 2135 to 2563 1 to 429       429/429
(100 %)
1 diff
(99.8 %id)
AA773277 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SDHAP2andMUC20.a 2136 to 2565 1 to 430       430/430
(100 %)
2 diff
(99.6 %id)
AI827670 pooled SDHAP2andMUC20.a 2144 to 2525 404 to 24       381/404
(94 %)
0 diff
(100 %id)
BU734898 eye, lens SDHAP2andMUC20.a 2150 to 2588 457 to 19   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 439/439
(100 %)
2 diff
(99.6 %id)
AA132986 colon, tumor SDHAP2andMUC20.a 2156 to 2589 439 to 4   fully sequenced,   434/437
(99 %)
2 diff
(99.6 %id)
BE827167 lung_tumor SDHAP2andMUC20.a 2161 to 2565 415 to 12       404/415
(97 %)
0 diff
(100 %id)
AI279935 adenocarcinoma, Pancreas SDHAP2andMUC20.a 2169 to 2542 375 to 3       373/375
(99 %)
0 diff
(100 %id)
AI566178 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) SDHAP2andMUC20.a 2170 to 2591 427 to 7       421/427
(98 %)
0 diff
(100 %id)
AA336198 epididymis SDHAP2andMUC20.a 2174 to 2467 1 to 295       295/296
(99 %)
5 diff
(98.4 %id)
BF821663 kidney_tumor SDHAP2andMUC20.a 2174 to 2284 1 to 112       112/112
(100 %)
3 diff
(97.4 %id)
BG220509   SDHAP2andMUC20.a 2184 to 2541 1 to 358   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 358/358
(100 %)
5 diff
(98.7 %id)
AA746062 Kidney SDHAP2andMUC20.a 2185 to 2543 387 to 29   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 359/362
(99 %)
2 diff
(99.5 %id)
BG184127   SDHAP2andMUC20.a 2196 to 2510 14 to 327       314/328
(95 %)
18 diff
(94.6 %id)
AA972356 carcinoid, lung SDHAP2andMUC20.a 2214 to 2587 374 to 1       374/374
(100 %)
2 diff
(99.5 %id)
AI911191 pooled SDHAP2andMUC20.a 2217 to 2543 351 to 25   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 327/327
(100 %)
8 diff
(97.6 %id)
AA936755 squamous cell carcinoma from base of tongue, tongue SDHAP2andMUC20.a 2228 to 2591 370 to 8   tiling clone,   363/370
(98 %)
0 diff
(100 %id)
AI288048 Kidney, renal cell tumor SDHAP2andMUC20.a 2228 to 2542 323 to 9       315/323
(97 %)
0 diff
(100 %id)
AI566277 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) SDHAP2andMUC20.a 2228 to 2589 363 to 2       362/363
(99 %)
0 diff
(100 %id)
CB856682 anterior tongue, pooled SDHAP2andMUC20.a 2228 to 2588 1 to 361       361/364
(99 %)
2 diff
(99.5 %id)
AI803847 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.a 2240 to 2556 317 to 1       317/317
(100 %)
0 diff
(100 %id)
AI925474 poorly differentiated adenocarcinoma withsignet ring cell features, stomach SDHAP2andMUC20.a 2241 to 2556 316 to 1       316/316
(100 %)
13 diff
(95.9 %id)
AW167866 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.a 2266 to 2556 292 to 1       292/297
(98 %)
2 diff
(99.4 %id)
BM668163 eye, lens SDHAP2andMUC20.a 2279 to 2543 283 to 19   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 265/265
(100 %)
0 diff
(100 %id)
TI_149299004   SDHAP2andMUC20.a 2286 to 2591 405 to 100       306/1017
(30 %)
0 diff
(100 %id)
BU684885 lung, Primary Lung Cystic Fibrosis EpithelialCells SDHAP2andMUC20.a 2286 to 2591 323 to 18       306/330
(92 %)
0 diff
(100 %id)
AI884517 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.a 2299 to 2556 258 to 1       258/258
(100 %)
0 diff
(100 %id)
AI690524 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.a 2305 to 2584 308 to 29   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 280/280
(100 %)
13 diff
(95.4 %id)
AA987392 Kidney, kidney tumor SDHAP2andMUC20.a 2307 to 2542 264 to 29   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 236/236
(100 %)
0 diff
(100 %id)
AI432597 Prostate SDHAP2andMUC20.a 2312 to 2543 245 to 14   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 232/232
(100 %)
2 diff
(99.2 %id)
AI591335 brain, tumor, 5 pooled (see description) SDHAP2andMUC20.a 2333 to 2542 210 to 1       210/210
(100 %)
0 diff
(100 %id)
AI561306 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SDHAP2andMUC20.a 2334 to 2543 210 to 1       210/210
(100 %)
0 diff
(100 %id)
AW242240 adenocarcinoma, Pancreas SDHAP2andMUC20.a 2360 to 2556 198 to 1       198/198
(100 %)
2 diff
(99.0 %id)
AI914681 ovary, tumor, 5 pooled (see description) SDHAP2andMUC20.a 2368 to 2556 192 to 1       192/193
(99 %)
6 diff
(96.9 %id)
AA535954 colon SDHAP2andMUC20.a 2405 to 2544 140 to 1       140/140
(100 %)
0 diff
(100 %id)
T24909   SDHAP2andMUC20.a 2413 to 2589 187 to 9       179/187
(95 %)
0 diff
(100 %id)
C00667   SDHAP2andMUC20.a 2536 to 2590 1 to 55       55/55
(100 %)
0 diff
(100 %id)
AK075138 placenta SDHAP2andMUC20.b 1 to 1712 20 to 1739 L18V W19S L21V T22W P24C ... tiling clone, available from FLJ,   1720/1720
(100 %)
34 diff
(98.1 %id)
BF773137 epid_tumor SDHAP2andMUC20.b 891 to 1023 140 to 10     Submitted on the opposite strand 131/140
(93 %)
0 diff
(100 %id)
BF822654 kidney_tumor SDHAP2andMUC20.b 891 to 1023 140 to 10     Submitted on the opposite strand 131/140
(93 %)
0 diff
(100 %id)
BP352469   SDHAP2andMUC20.b 1386 to 1931 1 to 547   tiling clone,   547/555
(98 %)
10 diff
(98.2 %id)
AA132631 colon, tumor SDHAP2andMUC20.c 1 to 433 1 to 429   tiling clone,   429/440
(97 %)
19 diff
(95.7 %id)
BI766060 pooled lung and spleen SDHAP2andMUC20.c 214 to 994 1 to 777   tiling clone,   777/777
(100 %)
6 diff
(99.3 %id)
TI_57177979   SDHAP2andMUC20.c 214 to 994 65 to 841       777/841
(92 %)
10 diff
(98.9 %id)
BQ707897 Spleen SDHAP2andMUC20.c 350 to 1057 1 to 707   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 707/707
(100 %)
1 diff
(99.9 %id)
TI_149299145   SDHAP2andMUC20.c 391 to 1084 744 to 59       686/857
(80 %)
19 diff
(97.8 %id)
BM975609 lung, Primary Lung Cystic Fibrosis EpithelialCells SDHAP2andMUC20.c 493 to 1075 583 to 1       583/583
(100 %)
4 diff
(99.4 %id)
BM700238 eye, lens SDHAP2andMUC20.c 531 to 1066 1 to 536   fully sequenced, AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 536/536
(100 %)
1 diff
(99.9 %id)
CA388650 eye, RPE/choroid SDHAP2andMUC20.c 601 to 1081 480 to 1   tiling clone,   480/484
(99 %)
3 diff
(99.4 %id)
BE327605 carcinoid, lung SDHAP2andMUC20.c 601 to 907 307 to 1       307/317
(96 %)
2 diff
(99.4 %id)
AA132448 colon, tumor SDHAP2andMUC20.c 603 to 1057 454 to 1       454/467
(97 %)
9 diff
(98.1 %id)
AI985968 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SDHAP2andMUC20.c 653 to 1059 408 to 1       408/408
(100 %)
9 diff
(97.8 %id)
BX115840 B-cell, chronic lymphotic leukemia SDHAP2andMUC20.c 679 to 1057 1 to 379   AAA Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 379/379
(100 %)
0 diff
(100 %id)
AI380576 B-cell, chronic lymphotic leukemia SDHAP2andMUC20.c 711 to 1059 349 to 1   tiling clone,   349/349
(100 %)
0 diff
(100 %id)
BU737969 eye, lens SDHAP2andMUC20.c 775 to 1075 301 to 1   fully sequenced, Possibly primed on the genome, locally A rich (23/23 A in genome downstream of last aligned base) 301/301
(100 %)
1 diff
(99.7 %id)
DR977798 brain SDHAP2andMUC20.c 912 to 1067 1 to 155     Submitted on the opposite strand 155/155
(100 %)
2 diff
(98.8 %id)
BC064564 Eye, retinoblastoma SDHAP2andMUC20.d 1 to 4186 1 to 4186 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 4186/4186
(100 %)
0 diff
(100 %id)
BE766633 nervous_tumor SDHAP2andMUC20.d 1803 to 1970 2 to 169       168/169
(99 %)
8 diff
(95.3 %id)
BE766637 nervous_tumor SDHAP2andMUC20.d 1803 to 2034 2 to 233       232/239
(97 %)
13 diff
(94.6 %id)
BQ951334 large cell carcinoma, lung SDHAP2andMUC20.d 1839 to 2514 1 to 687       687/806
(85 %)
21 diff
(97.4 %id)
AA683234 schizophrenic brain S-11 frontal lobe SDHAP2andMUC20.d 1955 to 2396 1 to 442     Submitted on the opposite strand 442/442
(100 %)
6 diff
(98.7 %id)
CD722733 eye, lacrimal gland SDHAP2andMUC20.d 2100 to 2454 619 to 265     Submitted on the opposite strand 355/619
(57 %)
0 diff
(100 %id)
BF759949 colon SDHAP2andMUC20.d 2131 to 2524 7 to 397       391/397
(98 %)
6 diff
(98.5 %id)
BG006544 placenta_normal SDHAP2andMUC20.d 2373 to 2774 410 to 8       403/417
(96 %)
0 diff
(100 %id)
BM016155 breast, mammary adenocarcinoma, cell line SDHAP2andMUC20.d 2556 to 3429 1 to 874       874/877
(99 %)
13 diff
(98.6 %id)
TI_59394548.
matches multiple genes
  SDHAP2andMUC20.d 2556 to 3429 91 to 964     also hits gene SDHAP1 874/877
(99 %)
13 diff
(98.6 %id)
CN278766 embryonic stem cells, cell lines H1, H7, andH9 SDHAP2andMUC20.d 2650 to 3072 1 to 423       423/423
(100 %)
2 diff
(99.6 %id)
BI549899.
matches multiple genes
brain, hippocampus SDHAP2andMUC20.d 2893 to 3525 1 to 630   tiling clone, also hits gene SDHAP1 630/630
(100 %)
11 diff
(98.3 %id)
TI_44171458.
matches multiple genes
  SDHAP2andMUC20.d 2897 to 3525 85 to 710   tiling clone, also hits gene SDHAP1 626/710
(88 %)
11 diff
(98.5 %id)
DA797717 brain SDHAP2andMUC20.d 2911 to 3460 2 to 551   capped   550/550
(100 %)
4 diff
(99.3 %id)
BM554766 duodenal adenocarcinoma, cell line, small intestine SDHAP2andMUC20.d 3245 to 4308 1 to 1064       1064/1065
(99 %)
14 diff
(98.7 %id)
DB236189.
matches multiple genes
trachea SDHAP2andMUC20.d 3447 to 4026 2 to 582   capped also hits gene SDHAP1 581/581
(100 %)
4 diff
(99.4 %id)
DA740636.
matches multiple genes
  SDHAP2andMUC20.d 3525 to 3987 2 to 461   capped also hits gene SDHAP1 460/460
(100 %)
16 diff
(96.6 %id)
CV371716.
matches multiple genes
breast SDHAP2andMUC20.d 3579 to 3837 266 to 4     Submitted on the opposite strand, also hits gene SDHAP1 263/270
(97 %)
0 diff
(100 %id)
CV346489.
matches multiple genes
testis_normal SDHAP2andMUC20.d 3601 to 3903 9 to 314     also hits gene SDHAP1 306/314
(97 %)
6 diff
(98.1 %id)
DA364280 subthalamic nucleus SDHAP2andMUC20.d 3816 to 4382 2 to 567   capped   566/566
(100 %)
21 diff
(96.3 %id)
DB107153 thymus SDHAP2andMUC20.d 3872 to 4452 2 to 586   capped   585/585
(100 %)
6 diff
(99.0 %id)
AI955556 adenocarcinoma, Pancreas SDHAP2andMUC20.d 3883 to 4208 354 to 29       326/354
(92 %)
0 diff
(100 %id)
BX477618   SDHAP2andMUC20.d 4088 to 4633 1 to 547   tiling clone,   547/547
(100 %)
3 diff
(99.5 %id)
DA301134 hippocampus SDHAP2andMUC20.d 4210 to 4766 2 to 557   capped   556/556
(100 %)
7 diff
(98.8 %id)
DA096070 cerebellum SDHAP2andMUC20.d 4218 to 4780 2 to 561   capped   560/560
(100 %)
9 diff
(98.4 %id)
BX491812   SDHAP2andMUC20.d 4341 to 4823 24 to 511       488/512
(95 %)
21 diff
(95.9 %id)
DB106010 thymus SDHAP2andMUC20.d 4436 to 4993 2 to 559   tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
DA749950   SDHAP2andMUC20.d 4493 to 5061 2 to 566   tiling clone, capped   565/568
(99 %)
21 diff
(96.4 %id)
CA394202 eye, RPE/choroid SDHAP2andMUC20.d 4500 to 5045 1 to 541       541/541
(100 %)
20 diff
(96.4 %id)
BG983332 colon_normal SDHAP2andMUC20.d 4515 to 4979 1 to 461       461/461
(100 %)
20 diff
(95.7 %id)
BI059307 placenta_normal SDHAP2andMUC20.d 4520 to 4701 1 to 181       181/187
(96 %)
12 diff
(93.6 %id)
CN268871 embryonic stem cells, cell lines H1, H7, andH9 SDHAP2andMUC20.d 4555 to 5067 1 to 508   tiling clone,   508/508
(100 %)
21 diff
(95.9 %id)
CV409543 head_neck SDHAP2andMUC20.d 4585 to 4785 202 to 1     Submitted on the opposite strand 202/202
(100 %)
3 diff
(98.6 %id)
DA124605 cerebellum SDHAP2andMUC20.d 4846 to 5338 2 to 488   tiling clone, capped   487/487
(100 %)
32 diff
(93.5 %id)
CB115869 Liver SDHAP2andMUC20.d 5193 to 5501 310 to 1   tiling clone, Submitted on the opposite strand 310/311
(99 %)
30 diff
(90.4 %id)
BI031951 marrow SDHAP2andMUC20.d 5256 to 5514 1 to 260   tiling clone,   260/260
(100 %)
13 diff
(95.0 %id)
DA409811.
matches multiple genes
thalamus SDHAP2andMUC20.e -11 to 648 2 to 661   tiling clone, capped also hits gene SDHAP1 660/660
(100 %)
5 diff
(99.3 %id)
DA927782.
matches multiple genes
small intestine SDHAP2andMUC20.e -11 to 300 2 to 313   capped also hits gene SDHAP1 312/312
(100 %)
3 diff
(99.1 %id)
DB276737 uterus SDHAP2andMUC20.e -11 to 530 2 to 543   capped   542/542
(100 %)
5 diff
(99.1 %id)
DA295069 hippocampus SDHAP2andMUC20.e -10 to 556 2 to 568   capped   567/567
(100 %)
5 diff
(99.2 %id)
BU601098.
matches multiple genes
mixed (pool of 40 RNAs) SDHAP2andMUC20.e 1 to 726 4 to 734   tiling clone, available from MGC, also hits gene SDHAP1 734/823
(89 %)
13 diff
(98.5 %id)
DB223862.
matches multiple genes
trachea SDHAP2andMUC20.e 1 to 559 2 to 560   tiling clone, capped also hits gene SDHAP1 559/559
(100 %)
3 diff
(99.5 %id)
DA118348 cerebellum SDHAP2andMUC20.e 2 to 559 2 to 560   capped   559/561
(99 %)
4 diff
(99.3 %id)
DA334311 hippocampus SDHAP2andMUC20.e 2 to 573 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB149589 thymus SDHAP2andMUC20.e 2 to 273 2 to 273   capped   272/272
(100 %)
0 diff
(100 %id)
BE513197 adenocarcinoma cell line, colon SDHAP2andMUC20.e 4 to 786 21 to 798       778/875
(88 %)
27 diff
(97.0 %id)
BM470759 eye, retinoblastoma SDHAP2andMUC20.e 14 to 932 1 to 922   available from MGC,   922/983
(93 %)
17 diff
(98.3 %id)
CB993618.
matches multiple genes
placenta, pre-eclamptic placenta SDHAP2andMUC20.e 23 to 661 28 to 672   available from MGC, also hits gene LOC220729 645/947
(68 %)
22 diff
(97.7 %id)
DA054160.
matches multiple genes
cerebellum SDHAP2andMUC20.e 27 to 559 2 to 534   capped also hits gene SDHAP1 533/533
(100 %)
3 diff
(99.5 %id)
DA305021 hippocampus SDHAP2andMUC20.e 28 to 618 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DA784075.
matches multiple genes
brain SDHAP2andMUC20.e 28 to 349 2 to 323   capped also hits gene SDHAP1 322/322
(100 %)
1 diff
(99.7 %id)
AK074764   SDHAP2andMUC20.e 29 to 2275 1 to 2247 G169R H218R available from FLJ,   2247/2247
(100 %)
6 diff
(99.8 %id)
DA116853.
matches multiple genes
cerebellum SDHAP2andMUC20.e 30 to 571 2 to 543   capped also hits gene LOC220729 542/542
(100 %)
5 diff
(99.1 %id)
DA731680   SDHAP2andMUC20.e 30 to 809 2 to 789   capped   788/798
(98 %)
27 diff
(96.7 %id)
CV569107 cornea, eye SDHAP2andMUC20.e 44 to 537 1 to 494       494/494
(100 %)
0 diff
(100 %id)
AW953225   SDHAP2andMUC20.e 53 to 617 11 to 574       564/576
(97 %)
10 diff
(98.3 %id)
T33322.
matches multiple genes
brain SDHAP2andMUC20.e 85 to 295 33 to 244     also hits gene SDHAP1 212/244
(86 %)
7 diff
(97.2 %id)
DA415861 thalamus SDHAP2andMUC20.e 102 to 551 127 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
BQ231936 large cell carcinoma, lung SDHAP2andMUC20.e 102 to 666 117 to 688   available from MGC,   688/900
(76 %)
30 diff
(96.7 %id)
NR_003265.3   SDHAP2andMUC20.e 102 to 2275 128 to 2301 exact RefSeq, tiling clone, AAA   2301/2301
(100 %)
0 diff
(100 %id)
DA928883.
matches multiple genes
small intestine SDHAP2andMUC20.e 102 to 540 127 to 565   tiling clone, capped also hits gene SDHAP1 564/564
(100 %)
3 diff
(99.5 %id)
DB277065 uterus SDHAP2andMUC20.e 102 to 247 118 to 263   capped   262/262
(100 %)
2 diff
(99.3 %id)
DB285534 uterus SDHAP2andMUC20.e 102 to 519 128 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
CV334381 nervous_tumor SDHAP2andMUC20.e 441 to 707 268 to 1     Submitted on the opposite strand 268/268
(100 %)
8 diff
(97.1 %id)
BP224451 colon mucosa SDHAP2andMUC20.e 498 to 1040 1 to 543       543/543
(100 %)
2 diff
(99.7 %id)
DC399264.
matches multiple genes
testis SDHAP2andMUC20.e 504 to 1040 1 to 538     also hits gene SDHAP1 538/538
(100 %)
8 diff
(98.6 %id)
BQ337900.
matches multiple genes
nervous_normal SDHAP2andMUC20.e 521 to 707 187 to 1     also hits gene SDHAP1 187/187
(100 %)
3 diff
(98.4 %id)
BQ367171.
matches multiple genes
placenta_normal SDHAP2andMUC20.e 529 to 707 179 to 1     also hits gene SDHAP1 179/179
(100 %)
3 diff
(98.4 %id)
CD559011.
matches multiple genes
White Matter SDHAP2andMUC20.e 662 to 1423 1 to 763     also hits gene SDHAP1 763/841
(90 %)
9 diff
(99.0 %id)
BE763978 nervous_tumor SDHAP2andMUC20.e 723 to 823 1 to 101       101/114
(88 %)
0 diff
(100 %id)
BG003708.
matches multiple genes
placenta_normal SDHAP2andMUC20.e 723 to 857 142 to 9     also hits gene SDHAP1 134/142
(94 %)
0 diff
(100 %id)
F08613.
matches multiple genes
brain, total brain SDHAP2andMUC20.e 738 to 1077 1 to 340     also hits gene SDHAP1 340/340
(100 %)
3 diff
(99.2 %id)
H09364.
matches multiple genes
whole brain SDHAP2andMUC20.e 739 to 1277 1 to 544     Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base), also hits gene SDHAP1 544/546
(99 %)
17 diff
(96.9 %id)
BF925788 nervous_tumor SDHAP2andMUC20.e 752 to 924 23 to 195       173/195
(88 %)
8 diff
(95.9 %id)
BX461079.
matches multiple genes
brain, fetal brain SDHAP2andMUC20.e 819 to 1700 1 to 883     also hits gene SDHAP1 881/883
(99 %)
15 diff
(98.4 %id)
CK003895.
matches multiple genes
brain/CNS, Human Brain - Cerebellar Cortex SDHAP2andMUC20.e 820 to 1297 1 to 482     also hits gene SDHAP1 482/659
(73 %)
33 diff
(95.0 %id)
CD673727.
matches multiple genes
eye, lens SDHAP2andMUC20.e 832 to 1265 1 to 437     also hits gene SDHAP1 437/437
(100 %)
22 diff
(95.0 %id)
CV377892 colon SDHAP2andMUC20.e 846 to 1331 9 to 489       481/489
(98 %)
13 diff
(97.4 %id)
DN831486.
matches multiple genes
pooled SDHAP2andMUC20.e 851 to 1313 464 to 2     Submitted on the opposite strand, also hits gene SDHAP1 463/464
(99 %)
2 diff
(99.6 %id)
CV377894.
matches multiple genes
colon SDHAP2andMUC20.e 852 to 1270 13 to 432     also hits gene SDHAP1 420/432
(97 %)
13 diff
(97.0 %id)
CV386817.
matches multiple genes
lung_tumor SDHAP2andMUC20.e 875 to 1365 1 to 492     also hits gene SDHAP1 492/492
(100 %)
13 diff
(97.4 %id)
BE245209.
matches multiple genes
leukopheresis SDHAP2andMUC20.e 910 to 1301 1 to 392     also hits gene SDHAP1 392/392
(100 %)
3 diff
(99.3 %id)
BE246164.
matches multiple genes
leukopheresis SDHAP2andMUC20.e 910 to 1466 1 to 557     also hits gene SDHAP1 557/561
(99 %)
1 diff
(99.9 %id)
DC414229.
matches multiple genes
trachea SDHAP2andMUC20.e 946 to 1519 1 to 574     also hits gene SDHAP1 574/574
(100 %)
5 diff
(99.2 %id)
CV378816.
matches multiple genes
placenta_normal SDHAP2andMUC20.e 975 to 1197 1 to 222     also hits gene SDHAP1 222/231
(96 %)
15 diff
(93.6 %id)
CV386811.
matches multiple genes
lung_tumor SDHAP2andMUC20.e 1047 to 1548 520 to 18     Submitted on the opposite strand, also hits gene SDHAP1 503/520
(96 %)
4 diff
(99.3 %id)
BQ343686 nervous_tumor SDHAP2andMUC20.e 1116 to 1467 376 to 24       355/376
(94 %)
2 diff
(99.5 %id)
BQ371594.
matches multiple genes
prostate_normal SDHAP2andMUC20.e 1116 to 1501 387 to 1     also hits gene SDHAP1 387/387
(100 %)
6 diff
(98.5 %id)
AA426074.
matches multiple genes
  SDHAP2andMUC20.e 1187 to 1664 1 to 478     also hits gene PLCE1, SDHAP1 478/478
(100 %)
13 diff
(97.3 %id)
DR008064.
matches multiple genes
pooled SDHAP2andMUC20.e 1324 to 1934 610 to 1     Submitted on the opposite strand, also hits gene SDHAP1 610/610
(100 %)
11 diff
(98.2 %id)
TI_837040601   SDHAP2andMUC20.e 1329 to 1987 7 to 666   fully sequenced,   660/666
(99 %)
70 diff
(89.5 %id)
TI_837040602   SDHAP2andMUC20.e 1423 to 1941 533 to 16   fully sequenced,   518/533
(97 %)
3 diff
(99.5 %id)
EC466222.
matches multiple genes
Prostate SDHAP2andMUC20.e 1516 to 1592 84 to 11     also hits gene SDHAP1 74/85
(87 %)
0 diff
(100 %id)
DB050793 testis SDHAP2andMUC20.e 1546 to 2099 2 to 555   capped   554/554
(100 %)
5 diff
(99.1 %id)
BQ684755 ductal carcinoma, cell line, Pancreas SDHAP2andMUC20.e 1725 to 2275 1 to 551   AAA   551/551
(100 %)
2 diff
(99.7 %id)
BQ445981 Knee, Osteoarthritic Cartilage SDHAP2andMUC20.e 1764 to 2275 530 to 19   AAA   512/521
(98 %)
3 diff
(99.5 %id)
BE712485 head_neck SDHAP2andMUC20.e 1793 to 2233 1 to 438       438/438
(100 %)
8 diff
(98.2 %id)
H09307.
matches multiple genes
whole brain SDHAP2andMUC20.e 1842 to 2275 454 to 13   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base), also hits gene SDHAP1 442/479
(92 %)
15 diff
(96.9 %id)
BE929873 placenta_normal SDHAP2andMUC20.e 1890 to 2264 375 to 1       375/376
(99 %)
1 diff
(99.8 %id)
BG208253.
matches multiple genes
  SDHAP2andMUC20.e 1954 to 2188 40 to 275     also hits gene SDHAP1 236/275
(85 %)
6 diff
(97.9 %id)
Z41747.
matches multiple genes
brain, total brain SDHAP2andMUC20.e 1993 to 2275 283 to 1     also hits gene SDHAP1 283/283
(100 %)
0 diff
(100 %id)
DA098040.
matches multiple genes
cerebellum SDHAP2andMUC20.f -11 to 515 2 to 527   capped also hits gene SDHAP1 526/530
(99 %)
5 diff
(99.1 %id)
DA103152 cerebellum SDHAP2andMUC20.f -11 to 538 2 to 551   capped   550/550
(100 %)
8 diff
(98.6 %id)
DA106051 cerebellum SDHAP2andMUC20.f -11 to 533 2 to 546   capped   545/545
(100 %)
5 diff
(99.1 %id)
DA337429 hippocampus SDHAP2andMUC20.f -11 to 565 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA805645 brain SDHAP2andMUC20.f -11 to 527 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB106614 thymus SDHAP2andMUC20.f -11 to 455 2 to 468   capped   467/467
(100 %)
1 diff
(99.8 %id)
DB287547 uterus SDHAP2andMUC20.f -11 to 515 2 to 530   capped   529/529
(100 %)
2 diff
(99.7 %id)
DA116278.
matches multiple genes
cerebellum SDHAP2andMUC20.f -10 to 568 2 to 580   capped also hits gene LOC220729 579/579
(100 %)
7 diff
(98.8 %id)
DA879072.
matches multiple genes
Prostate SDHAP2andMUC20.f -10 to 557 2 to 569   capped also hits gene SDHAP1 568/568
(100 %)
5 diff
(99.2 %id)
DA148008 amygdala SDHAP2andMUC20.f 1 to 565 10 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB220494 trachea SDHAP2andMUC20.f 1 to 565 10 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA489011 brain SDHAP2andMUC20.f 1 to 557 8 to 564   capped   563/563
(100 %)
5 diff
(99.2 %id)
DA324648 hippocampus SDHAP2andMUC20.f 1 to 539 6 to 544   capped   543/543
(100 %)
2 diff
(99.7 %id)
AK057553 thymus SDHAP2andMUC20.f 1 to 2131 1 to 2131 L70V L121R A168T G169R tiling clone, available from FLJ,   2131/2131
(100 %)
7 diff
(99.7 %id)
DA762588 tongue SDHAP2andMUC20.f 1 to 575 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA800532 brain SDHAP2andMUC20.f 1 to 546 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
DB068255 testis SDHAP2andMUC20.f 1 to 544 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA211536.
matches multiple genes
brain SDHAP2andMUC20.f 2 to 558 2 to 558   capped also hits gene LOC220729 557/557
(100 %)
6 diff
(99.0 %id)
DA874280 Prostate SDHAP2andMUC20.f 2 to 568 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA945680.
matches multiple genes
Spleen SDHAP2andMUC20.f 2 to 549 2 to 550   capped also hits gene SDHAP1 549/549
(100 %)
6 diff
(99.0 %id)
DB100866 thymus SDHAP2andMUC20.f 2 to 719 2 to 720   capped   719/719
(100 %)
1 diff
(99.9 %id)
DB104055.
matches multiple genes
thymus SDHAP2andMUC20.f 2 to 556 2 to 556   capped also hits gene SDHAP1 555/555
(100 %)
4 diff
(99.3 %id)
DB263030 uterus SDHAP2andMUC20.f 2 to 499 2 to 499   capped   498/498
(100 %)
0 diff
(100 %id)
DA179214 amygdala SDHAP2andMUC20.f 8 to 570 2 to 567   capped   566/566
(100 %)
8 diff
(98.6 %id)
DA262862 caudate nucleus SDHAP2andMUC20.f 9 to 572 2 to 565   capped   564/564
(100 %)
5 diff
(99.2 %id)
DA094074.
matches multiple genes
cerebellum SDHAP2andMUC20.f 10 to 565 2 to 557   capped also hits gene SDHAP1 556/556
(100 %)
4 diff
(99.3 %id)
DA122981.
matches multiple genes
cerebellum SDHAP2andMUC20.f 11 to 574 2 to 566   capped also hits gene LOC220729 565/565
(100 %)
9 diff
(98.5 %id)
DB111315 thymus SDHAP2andMUC20.f 11 to 594 2 to 585   capped   584/584
(100 %)
5 diff
(99.2 %id)
T08702.
matches multiple genes
  SDHAP2andMUC20.f 14 to 415 1 to 403     also hits gene SDHAP1 403/403
(100 %)
6 diff
(98.6 %id)
AV724723 hypothalamus SDHAP2andMUC20.f 15 to 422 1 to 399       399/402
(99 %)
9 diff
(97.8 %id)
DB081940 testis SDHAP2andMUC20.f 24 to 547 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DB081953 testis SDHAP2andMUC20.f 24 to 522 2 to 500   capped   499/499
(100 %)
0 diff
(100 %id)
DA100428 cerebellum SDHAP2andMUC20.f 30 to 586 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA700697   SDHAP2andMUC20.f 30 to 548 2 to 520   capped   519/519
(100 %)
3 diff
(99.5 %id)
DA799494.
matches multiple genes
brain SDHAP2andMUC20.f 30 to 582 2 to 554   capped also hits gene SDHAP1 553/553
(100 %)
5 diff
(99.1 %id)
DB061976.
matches multiple genes
testis SDHAP2andMUC20.f 30 to 577 2 to 549   capped also hits gene SDHAP1 548/548
(100 %)
6 diff
(99.0 %id)
DB285726.
matches multiple genes
uterus SDHAP2andMUC20.f 30 to 578 2 to 550   capped also hits gene SDHAP1 549/549
(100 %)
4 diff
(99.3 %id)
BE537003 cervix SDHAP2andMUC20.f 31 to 629 1 to 606   available from MGC,   606/683
(88 %)
19 diff
(97.3 %id)
DB069544 testis SDHAP2andMUC20.f 36 to 581 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BQ371193 prostate_normal SDHAP2andMUC20.f 42 to 413 373 to 2       372/374
(99 %)
1 diff
(99.8 %id)
CN265106 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells SDHAP2andMUC20.f 44 to 754 1 to 711       711/711
(100 %)
2 diff
(99.8 %id)
DA457940 tongue, tumor tissue SDHAP2andMUC20.f 102 to 552 129 to 579   capped   578/578
(100 %)
5 diff
(99.2 %id)
BM836650.
matches multiple genes
Ascites, stomach SDHAP2andMUC20.f 102 to 443 115 to 456     also hits gene SDHAP1 456/456
(100 %)
7 diff
(98.5 %id)
DA921254 small intestine SDHAP2andMUC20.f 102 to 538 127 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB071545.
matches multiple genes
testis SDHAP2andMUC20.f 102 to 534 127 to 559   capped also hits gene SDHAP1 558/558
(100 %)
6 diff
(99.0 %id)
DB133021 thymus SDHAP2andMUC20.f 196 to 740 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DB342063 thymus SDHAP2andMUC20.f 1687 to 2131 446 to 1       446/507
(87 %)
7 diff
(98.7 %id)
DA858782.
matches multiple genes
placenta SDHAP2andMUC20.g -11 to 457 2 to 472   capped also hits gene SDHAP1 471/471
(100 %)
11 diff
(97.7 %id)
DC422991.
matches multiple genes
uterus SDHAP2andMUC20.g 1 to 537 3 to 540     also hits gene SDHAP1 540/550
(98 %)
8 diff
(98.6 %id)
AK299148.
matches multiple genes
  SDHAP2andMUC20.g 1 to 872 2 to 873   tiling clone, also hits gene SDHAP1 873/873
(100 %)
7 diff
(99.2 %id)
DB636303.
matches multiple genes
testis SDHAP2andMUC20.g 1 to 343 2 to 343     also hits gene SDHAP1 343/688
(49 %)
10 diff
(98.6 %id)
DC371761.
matches multiple genes
  SDHAP2andMUC20.g 1 to 537 1 to 539     also hits gene SDHAP1 539/539
(100 %)
8 diff
(98.6 %id)
AK300421.
matches multiple genes
placenta SDHAP2andMUC20.g 10 to 1392 1 to 1384   tiling clone, also hits gene SDHAP1 1384/1384
(100 %)
24 diff
(98.3 %id)
DC382381.
matches multiple genes
placenta SDHAP2andMUC20.g 10 to 572 1 to 563     also hits gene SDHAP1 563/563
(100 %)
9 diff
(98.5 %id)
DC385349.
matches multiple genes
rectum SDHAP2andMUC20.g 23 to 594 1 to 573   tiling clone, also hits gene SDHAP1 573/573
(100 %)
5 diff
(99.2 %id)
CN275388.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline SDHAP2andMUC20.g 32 to 699 1 to 668   tiling clone, also hits gene SDHAP1 668/668
(100 %)
5 diff
(99.3 %id)
TI_227715500   SDHAP2andMUC20.g 966 to 1872 986 to 85   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 902/1038
(86 %)
22 diff
(97.9 %id)
TI_154127221   SDHAP2andMUC20.g 967 to 1872 982 to 94   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 889/1018
(87 %)
50 diff
(95.1 %id)
CA416957 Chondrosarcoma Cell line SDHAP2andMUC20.g 1182 to 1872 705 to 16   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 690/690
(100 %)
19 diff
(97.3 %id)
BQ005850 Chondrosarcoma, Left Pubic Bone SDHAP2andMUC20.g 1237 to 1872 651 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 636/636
(100 %)
12 diff
(98.2 %id)
CD366632 Alveolar Macrophage, lung SDHAP2andMUC20.g 1260 to 1872 629 to 17   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 613/613
(100 %)
0 diff
(100 %id)
AI186590 placenta SDHAP2andMUC20.g 1340 to 1873 533 to 1       533/533
(100 %)
16 diff
(97.0 %id)
AA405860.
matches multiple genes
  SDHAP2andMUC20.g 1426 to 1875 449 to 1   tiling clone, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base), also hits gene SDHAP1, TRIP10 449/451
(99 %)
16 diff
(96.5 %id)
TI_1948138216   SDHAP2andMUC20.h 1 to 696 128 to 828 L3V W4S L6V T7W P9C ... tiling clone,   701/1438
(48 %)
25 diff
(98.3 %id)
TI_149283103   SDHAP2andMUC20.i 1 to 777 852 to 77 T2P V6* tiling clone,   776/897
(86 %)
55 diff
(93.9 %id)
DC348060.
matches multiple genes
tongue, tumor tissue SDHAP2andMUC20.j 1 to 556 1 to 557   tiling clone, also hits gene SDHAP1 557/566
(98 %)
11 diff
(98.1 %id)
DC409293.
matches multiple genes
thymus SDHAP2andMUC20.j 225 to 695 1 to 473   tiling clone, also hits gene SDHAP1 473/475
(99 %)
15 diff
(96.9 %id)
CV374170.
matches multiple genes
placenta_normal SDHAP2andMUC20.j 315 to 734 1 to 422   tiling clone, also hits gene SDHAP1 422/423
(99 %)
16 diff
(96.3 %id)
AI991219 colon, colonic mucosa from 3 patients with Crohn'sdisease SDHAP2andMUC20.j 327 to 926 630 to 30   tiling clone, AAA   601/615
(97 %)
0 diff
(100 %id)
BF920170.
matches multiple genes
nervous_tumor SDHAP2andMUC20.j 409 to 760 376 to 17   tiling clone, Submitted on the opposite strand, also hits gene SDHAP1 360/378
(95 %)
0 diff
(100 %id)
AI003405.
matches multiple genes
schizophrenic brain S-11 frontal lobe SDHAP2andMUC20.j 862 to 1235 1 to 373   tiling clone, Submitted on the opposite strand, also hits gene SDHAP1 373/373
(100 %)
7 diff
(98.2 %id)
BX486167   SDHAP2andMUC20.j 863 to 1308 1 to 446   tiling clone,   446/446
(100 %)
0 diff
(100 %id)
DC422810 uterus SDHAP2andMUC20.k -11 to 539 1 to 551       551/551
(100 %)
5 diff
(99.1 %id)
CB996430.
matches multiple genes
placenta, pre-eclamptic placenta SDHAP2andMUC20.k 1 to 671 29 to 705   tiling clone, also hits gene SDHAP1 677/835
(81 %)
17 diff
(98.0 %id)
CB994103.
matches multiple genes
placenta, pre-eclamptic placenta SDHAP2andMUC20.k 1 to 522 29 to 550   tiling clone, also hits gene SDHAP1 524/577
(90 %)
10 diff
(98.3 %id)
CB991057.
matches multiple genes
placenta, pre-eclamptic placenta SDHAP2andMUC20.k 1 to 702 29 to 734     also hits gene SDHAP1 708/805
(87 %)
20 diff
(97.6 %id)
CB994068.
matches multiple genes
placenta, pre-eclamptic placenta SDHAP2andMUC20.k 1 to 658 29 to 684     also hits gene SDHAP1 658/785
(83 %)
14 diff
(98.3 %id)
CB993044.
matches multiple genes
placenta, pre-eclamptic placenta SDHAP2andMUC20.k 1 to 702 29 to 736     also hits gene SDHAP1 710/815
(87 %)
24 diff
(97.1 %id)
AK316025.
matches multiple genes
brain SDHAP2andMUC20.k 3 to 1086 1 to 1084   tiling clone, also hits gene SDHAP1 1084/1084
(100 %)
11 diff
(99.0 %id)
DC324851.
matches multiple genes
brain SDHAP2andMUC20.k 3 to 579 1 to 578     also hits gene SDHAP1 578/580
(99 %)
7 diff
(98.8 %id)
AW498609 brain SDHAP2andMUC20.k 19 to 348 1 to 331       331/331
(100 %)
5 diff
(98.5 %id)
AW952739.
matches multiple genes
  SDHAP2andMUC20.k 19 to 520 1 to 503     also hits gene SDHAP1 503/506
(99 %)
23 diff
(95.5 %id)
DC317339.
matches multiple genes
amygdala SDHAP2andMUC20.k 23 to 563 1 to 541     also hits gene SDHAP1 541/541
(100 %)
7 diff
(98.8 %id)
BQ322893 colon_est SDHAP2andMUC20.k 45 to 252 1 to 208       208/208
(100 %)
3 diff
(98.6 %id)
DC305691.
matches multiple genes
cerebellum SDHAP2andMUC20.k 102 to 503 115 to 516   tiling clone, also hits gene SDHAP1 516/516
(100 %)
3 diff
(99.5 %id)
DC358761 lung SDHAP2andMUC20.k 102 to 556 115 to 569       569/569
(100 %)
5 diff
(99.2 %id)
DA556593.
matches multiple genes
  SDHAP2andMUC20.k 864 to 1428 2 to 566   tiling clone, capped also hits gene SDHAP1 565/565
(100 %)
5 diff
(99.2 %id)
DA290089 hippocampus SDHAP2andMUC20.k 995 to 1577 2 to 585   tiling clone, capped   584/584
(100 %)
2 diff
(99.7 %id)
BE080614.
matches multiple genes
breast SDHAP2andMUC20.k 1291 to 1517 8 to 236   tiling clone, also hits gene SDHAP1 229/236
(97 %)
6 diff
(97.5 %id)
BF807611 colon_ins SDHAP2andMUC20.k 1331 to 1590 1 to 260   tiling clone,   260/260
(100 %)
7 diff
(97.4 %id)
BG678140 skin, squamous cell carcinoma SDHAP2andMUC20.l 1 to 844 1 to 852   tiling clone,   852/967
(88 %)
10 diff
(99.0 %id)
CD299988 testis SDHAP2andMUC20.l 102 to 831 1 to 744       744/882
(84 %)
25 diff
(97.2 %id)
BU074794 Pancreas, Purified pancreatic islet SDHAP2andMUC20.l 185 to 734 1 to 550       550/550
(100 %)
13 diff
(97.7 %id)
BF694382 muscle (skeletal) SDHAP2andMUC20.l 261 to 844 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
BF575851 muscle (skeletal) SDHAP2andMUC20.l 359 to 1056 1 to 697       697/812
(85 %)
34 diff
(95.9 %id)
AW363486 colon SDHAP2andMUC20.l 415 to 875 469 to 9       461/469
(98 %)
0 diff
(100 %id)
AW861651 colon SDHAP2andMUC20.l 422 to 859 439 to 1       439/439
(100 %)
7 diff
(98.5 %id)
TI_154054558   SDHAP2andMUC20.l 509 to 1343 890 to 64       827/1056
(78 %)
32 diff
(97.0 %id)
AK128346 thymus SDHAP2andMUC20.l 521 to 3256 286 to 3017 N20D G104A S105A C106P S107N ... tiling clone, available from FLJ,   2736/3017
(90 %)
12 diff
(99.7 %id)
BG426356 Kidney SDHAP2andMUC20.l 521 to 854 365 to 698       334/888
(37 %)
18 diff
(98.0 %id)
AW857983 colon SDHAP2andMUC20.l 523 to 855 336 to 1       336/336
(100 %)
8 diff
(97.7 %id)
AI914741 ovary, tumor, 5 pooled (see description) SDHAP2andMUC20.l 537 to 870 334 to 1       334/335
(99 %)
0 diff
(100 %id)
CA418406 Chondrosarcoma Grade II, Left Pelvis SDHAP2andMUC20.l 539 to 1334 791 to 1       791/791
(100 %)
10 diff
(98.8 %id)
BI259909 cervical carcinoma cell line, cervix SDHAP2andMUC20.l 554 to 1253 1 to 697       697/698
(99 %)
6 diff
(99.2 %id)
BF801065 colon_ins SDHAP2andMUC20.l 675 to 1022 365 to 18     Submitted on the opposite strand 348/365
(95 %)
0 diff
(100 %id)
AA847414 ovary SDHAP2andMUC20.l 680 to 1051 8 to 379       372/379
(98 %)
6 diff
(98.5 %id)
BC144457 Brain, cerebellum, PCR rescued clones SDHAP2andMUC20.l 709 to 2911 1 to 2203 R120H tiling clone,   2203/2203
(100 %)
15 diff
(99.4 %id)
TI_2194694752   SDHAP2andMUC20.l 710 to 1884 49 to 1206       1158/1266
(91 %)
28 diff
(97.8 %id)
TI_2194694759   SDHAP2andMUC20.l 710 to 1882 48 to 1208       1161/1256
(92 %)
8 diff
(99.4 %id)
TI_2194699254   SDHAP2andMUC20.l 710 to 1788 48 to 1114       1067/1262
(84 %)
25 diff
(98.1 %id)
AI963431 adenocarcinoma, Pancreas SDHAP2andMUC20.l 806 to 1321 516 to 1       516/516
(100 %)
0 diff
(100 %id)
BU074509 Pancreas, Purified pancreatic islet SDHAP2andMUC20.l 832 to 1320 489 to 1       489/489
(100 %)
6 diff
(98.8 %id)
TI_1968234491   SDHAP2andMUC20.l 962 to 1915 960 to 14       947/1346
(70 %)
0 diff
(100 %id)
TI_2194698210   SDHAP2andMUC20.l 1241 to 2318 1 to 1069       1069/1247
(85 %)
24 diff
(98.1 %id)
CD238927 Pituitary SDHAP2andMUC20.l 1341 to 1864 1 to 524   AAA   524/524
(100 %)
3 diff
(99.5 %id)
AI253290 brain, hippocampus (see description) SDHAP2andMUC20.l 1392 to 1745 18 to 370       353/370
(95 %)
6 diff
(98.4 %id)
AI277347 placenta SDHAP2andMUC20.l 1421 to 1908 489 to 3       487/489
(99 %)
0 diff
(100 %id)
AA865083 germinal center B cell SDHAP2andMUC20.l 1461 to 1813 352 to 1       352/352
(100 %)
1 diff
(99.8 %id)
W01985 liver and spleen SDHAP2andMUC20.l 1479 to 1907 424 to 1     Submitted on the opposite strand 424/428
(99 %)
5 diff
(98.9 %id)
C13996   SDHAP2andMUC20.l 1537 to 1864 328 to 1       328/328
(100 %)
0 diff
(100 %id)
AI469577 colon, moderately-differentiated adenocarcinoma SDHAP2andMUC20.l 1558 to 1908 356 to 6       351/356
(98 %)
0 diff
(100 %id)
TI_2194694765   SDHAP2andMUC20.l 1781 to 2912 1197 to 71 L38C L39C S40L A41P S42V ...     1127/1292
(87 %)
16 diff
(98.8 %id)
TI_2194698207   SDHAP2andMUC20.l 1788 to 2898 1 to 1108 R120H     1108/1258
(88 %)
21 diff
(98.4 %id)
TI_2194699634   SDHAP2andMUC20.l 1791 to 2912 1184 to 70 S2L L3V W4F F5R R7F ...     1115/1303
(85 %)
13 diff
(99.1 %id)
TI_2194694771   SDHAP2andMUC20.l 1979 to 2912 998 to 72       927/1224
(75 %)
7 diff
(99.5 %id)
TI_2194698208   SDHAP2andMUC20.l 2336 to 2912 9 to 584       576/1231
(46 %)
4 diff
(99.7 %id)
AI525136 Prostate SDHAP2andMUC20.l 2534 to 2947 7 to 417       411/669
(61 %)
14 diff
(98.0 %id)
BF089232 head_neck SDHAP2andMUC20.l 2661 to 2862 1 to 202       202/202
(100 %)
6 diff
(97.1 %id)
T93861 liver and spleen SDHAP2andMUC20.l 2672 to 2781 124 to 15     Submitted on the opposite strand 110/124
(88 %)
0 diff
(100 %id)
FN106401 breast carcinoma SDHAP2andMUC20.l 2824 to 2886 62 to 1     Submitted on the opposite strand 62/63
(98 %)
1 diff
(98.5 %id)
BI000838 head_normal SDHAP2andMUC20.l 3074 to 3367 1 to 295   tiling clone,   295/295
(100 %)
3 diff
(99.0 %id)
BI041694 nervous_tumor SDHAP2andMUC20.l 3163 to 3758 596 to 1   tiling clone,   596/596
(100 %)
5 diff
(99.2 %id)
CV334432 nervous_tumor SDHAP2andMUC20.l 3320 to 3763 456 to 13   tiling clone, Submitted on the opposite strand 444/456
(97 %)
0 diff
(100 %id)
AW246175 lung, small cell carcinoma SDHAP2andMUC20.m 1 to 420 1 to 420   tiling clone, Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 420/420
(100 %)
10 diff
(97.7 %id)
AA524839 ovary SDHAP2andMUC20.m 876 to 1443 8 to 571   tiling clone,   564/571
(98 %)
6 diff
(99.0 %id)
AW249904 lung, small cell carcinoma SDHAP2andMUC20.m 887 to 1468 588 to 11   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 578/578
(100 %)
4 diff
(99.4 %id)
T33321 brain SDHAP2andMUC20.m 1184 to 1460 277 to 1   tiling clone,   277/277
(100 %)
0 diff
(100 %id)
BC073879 Placenta, choriocarcinoma SDHAP2andMUC20.n 1 to 1429 1 to 1429 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1429/1429
(100 %)
1 diff
(100.0 %id)
F07964.
matches multiple genes
brain, total brain SDHAP2andMUC20.n 5 to 316 1 to 310   tiling clone, also hits gene SDHAP1 310/310
(100 %)
4 diff
(98.8 %id)
F07965.
matches multiple genes
brain, total brain SDHAP2andMUC20.n 5 to 316 1 to 311   tiling clone, also hits gene SDHAP1 311/311
(100 %)
4 diff
(98.8 %id)
R61664.
matches multiple genes
whole brain SDHAP2andMUC20.n 6 to 372 1 to 369   tiling clone, also hits gene SDHAP1 371/369
(100 %)
12 diff
(96.8 %id)
R60996.
matches multiple genes
whole brain SDHAP2andMUC20.n 1117 to 1544 445 to 7   tiling clone, also hits gene SDHAP1 439/445
(98 %)
0 diff
(100 %id)
Z41038.
matches multiple genes
brain, total brain SDHAP2andMUC20.n 1228 to 1541 314 to 1   tiling clone, also hits gene SDHAP1 314/314
(100 %)
1 diff
(99.7 %id)
F04213.
matches multiple genes
brain, total brain SDHAP2andMUC20.n 1255 to 1541 287 to 1   tiling clone, also hits gene SDHAP1 287/287
(100 %)
1 diff
(99.7 %id)
BC053551 Lung, large cell carcinoma SDHAP2andMUC20.o 102 to 922 119 to 939 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 939/939
(100 %)
5 diff
(99.5 %id)
CV359347.
matches multiple genes
colon SDHAP2andMUC20.p-u 1 to 354 17 to 369   tiling clone, also hits gene LOC220729, SDHAP1 353/369
(95 %)
9 diff
(97.6 %id)
CV319572.
matches multiple genes
nervous_tumor SDHAP2andMUC20.p-u 132 to 556 2 to 424   tiling clone, also hits gene LOC220729, SDHAP1 423/424
(99 %)
6 diff
(98.6 %id)
DA151050 amygdala SDHAP2andMUC20.q-u 1 to 576 2 to 573   tiling clone, capped   572/573
(99 %)
24 diff
(95.9 %id)
DB253983 uterus SDHAP2andMUC20.q-u 89 to 631 2 to 542   tiling clone, capped   541/541
(100 %)
27 diff
(95.1 %id)
CX760027 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass SDHAP2andMUC20.q-u 744 to 1481 1 to 734   tiling clone, Submitted on the opposite strand 734/734
(100 %)
2 diff
(99.8 %id)
AA360875   SDHAP2andMUC20.q-u 946 to 1211 1 to 268       268/268
(100 %)
12 diff
(95.6 %id)
DA099001 cerebellum SDHAP2andMUC20.q-u 1019 to 1584 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA383600 thalamus SDHAP2andMUC20.q-u 1040 to 1662 2 to 627   capped   626/626
(100 %)
14 diff
(97.8 %id)
CN418632 embryonic stem cells, cell lines H1, H7, andH9 SDHAP2andMUC20.q-u 1153 to 1362 1 to 210       210/210
(100 %)
3 diff
(98.6 %id)
AL600694   SDHAP2andMUC20.q-u 1226 to 1827 1 to 602   tiling clone,   602/602
(100 %)
4 diff
(99.4 %id)
BG436556 placenta SDHAP2andMUC20.q-u 1250 to 1727 1 to 482       482/494
(97 %)
12 diff
(97.6 %id)
BE169862 head_neck SDHAP2andMUC20.q-u 1293 to 1531 243 to 1     Submitted on the opposite strand 243/243
(100 %)
8 diff
(96.8 %id)
BP425510.
matches multiple genes
small intestine SDHAP2andMUC20.q-u 1369 to 1897 1 to 530   tiling clone, Submitted on the opposite strand, also hits gene SDHAP1 530/530
(100 %)
12 diff
(97.8 %id)
BX479525   SDHAP2andMUC20.q-u 1426 to 1946 1 to 526   tiling clone,   526/526
(100 %)
13 diff
(97.6 %id)
AK125174.
matches multiple genes
brain SDHAP2andMUC20.q-u 1429 to 4557 1 to 3129 A29T tiling clone, available from FLJ, also hits gene SDHAP1 3129/3129
(100 %)
54 diff
(98.3 %id)
DA505931 brain SDHAP2andMUC20.q-u 1430 to 1985 2 to 558   capped   557/557
(100 %)
8 diff
(98.6 %id)
T71414 liver and spleen SDHAP2andMUC20.q-u 1539 to 1929 1 to 403       403/458
(87 %)
18 diff
(96.1 %id)
T82953 liver and spleen SDHAP2andMUC20.q-u 1539 to 1825 1 to 294       294/324
(90 %)
10 diff
(97.0 %id)
DB050212.
matches multiple genes
testis SDHAP2andMUC20.q-u 1589 to 2157 2 to 572 W57R capped also hits gene SDHAP1 571/571
(100 %)
9 diff
(98.5 %id)
DB165347.
matches multiple genes
thymus SDHAP2andMUC20.q-u 1814 to 2402 2 to 590   capped also hits gene SDHAP1 589/589
(100 %)
5 diff
(99.2 %id)
T67526.
matches multiple genes
liver and spleen SDHAP2andMUC20.q-u 1819 to 2372 561 to 1     also hits gene SDHAP1 561/563
(99 %)
11 diff
(98.1 %id)
AW827111 hepatic adenoma, Liver SDHAP2andMUC20.q-u 1877 to 2136 1 to 258   tiling clone, fully sequenced,   258/258
(100 %)
0 diff
(100 %id)
DB298967 cerebellum SDHAP2andMUC20.q-u 1911 to 2474 568 to 8       561/568
(98 %)
0 diff
(100 %id)
AA418110.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SDHAP2andMUC20.q-u 1930 to 2367 1 to 437     also hits gene SDHAP1, U2AF2 437/437
(100 %)
4 diff
(99.1 %id)
AA418013.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SDHAP2andMUC20.q-u 1941 to 2382 442 to 1     also hits gene SDHAP1, U2AF2 442/442
(100 %)
3 diff
(99.4 %id)
AI566272.
matches multiple genes
lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) SDHAP2andMUC20.q-u 1949 to 2382 434 to 1     also hits gene SDHAP1 434/434
(100 %)
3 diff
(99.4 %id)
AW237249.
matches multiple genes
pooled germ cell tumors SDHAP2andMUC20.q-u 1963 to 2408 446 to 2     also hits gene SDHAP1 445/446
(99 %)
0 diff
(100 %id)
AW075615.
matches multiple genes
2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney SDHAP2andMUC20.q-u 1966 to 2384 419 to 1     also hits gene SDHAP1 419/425
(98 %)
4 diff
(99.1 %id)
T71278 liver and spleen SDHAP2andMUC20.q-u 1971 to 2382 419 to 1       419/420
(99 %)
12 diff
(97.2 %id)
AA447211   SDHAP2andMUC20.q-u 1971 to 2385 415 to 1       415/415
(100 %)
0 diff
(100 %id)
T90447 liver and spleen SDHAP2andMUC20.q-u 1974 to 2381 423 to 4       420/446
(94 %)
0 diff
(100 %id)
BF109613.
matches multiple genes
pooled SDHAP2andMUC20.q-u 1997 to 2381 395 to 11   AAA Possibly primed on the genome, locally A rich (22/24 A in genome downstream of last aligned base), also hits gene SDHAP1 385/385
(100 %)
3 diff
(99.3 %id)
AL598713.
matches multiple genes
  SDHAP2andMUC20.q-u 2002 to 2813 1 to 813   tiling clone, also hits gene SDHAP1 813/813
(100 %)
10 diff
(98.8 %id)
AW004673.
matches multiple genes
colon SDHAP2andMUC20.q-u 2018 to 2382 362 to 1     also hits gene SDHAP1 362/373
(97 %)
9 diff
(97.6 %id)
BQ575188.
matches multiple genes
Chondrosarcoma Grade II, Left Pelvis SDHAP2andMUC20.q-u 2021 to 2382 1 to 363   AAA Submitted on the opposite strand, also hits gene SDHAP1 363/363
(100 %)
7 diff
(98.1 %id)
AA889913.
matches multiple genes
parathyroid gland, parathyroid tumor SDHAP2andMUC20.q-u 2029 to 2391 363 to 1   tiling clone, also hits gene SDHAP1 363/363
(100 %)
2 diff
(99.5 %id)
T32445.
matches multiple genes
Spleen SDHAP2andMUC20.q-u 2033 to 2382 350 to 1     also hits gene SDHAP1 350/350
(100 %)
5 diff
(98.6 %id)
AA528199.
matches multiple genes
normal prostate, Prostate SDHAP2andMUC20.q-u 2046 to 2385 341 to 1     also hits gene SDHAP1 341/341
(100 %)
2 diff
(99.5 %id)
AA635741.
matches multiple genes
normal prostate, Prostate SDHAP2andMUC20.q-u 2046 to 2386 341 to 1   tiling clone, also hits gene SDHAP1 341/341
(100 %)
1 diff
(99.8 %id)
AI659032 Prostate SDHAP2andMUC20.q-u 2046 to 2369 324 to 1       324/324
(100 %)
3 diff
(99.1 %id)
AA778037.
matches multiple genes
heart SDHAP2andMUC20.q-u 2073 to 2382 310 to 1     also hits gene SDHAP1 310/310
(100 %)
1 diff
(99.7 %id)
AW235494 hepatic adenoma, Liver SDHAP2andMUC20.q-u 2106 to 2400 318 to 23   fully sequenced, AAA   296/296
(100 %)
5 diff
(98.4 %id)
AI768298.
matches multiple genes
pooled SDHAP2andMUC20.q-u 2107 to 2382 277 to 2     also hits gene SDHAP1 276/277
(99 %)
0 diff
(100 %id)
T32433.
matches multiple genes
Spleen SDHAP2andMUC20.q-u 2120 to 2382 263 to 1     also hits gene SDHAP1 263/263
(100 %)
0 diff
(100 %id)
AA737040.
matches multiple genes
germinal center B cell SDHAP2andMUC20.q-u 2138 to 2391 254 to 1   tiling clone, also hits gene SDHAP1 254/254
(100 %)
1 diff
(99.7 %id)
T35153.
matches multiple genes
placenta SDHAP2andMUC20.q-u 2165 to 2382 1 to 219     also hits gene SDHAP1 219/219
(100 %)
1 diff
(99.6 %id)
AW188713.
matches multiple genes
moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus SDHAP2andMUC20.q-u 2185 to 2382 198 to 1     also hits gene SDHAP1 198/198
(100 %)
0 diff
(100 %id)
AI553680.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SDHAP2andMUC20.q-u 2203 to 2382 180 to 1     also hits gene SDHAP1 180/180
(100 %)
0 diff
(100 %id)
GD155041   SDHAP2andMUC20.q-u 2206 to 2391 1 to 186       186/187
(99 %)
6 diff
(96.8 %id)
AA076510.
matches multiple genes
Pancreas SDHAP2andMUC20.q-u 2228 to 2592 1 to 370     also hits gene SC4MOL, SDHAP1 370/373
(99 %)
12 diff
(96.8 %id)
AI167204.
matches multiple genes
pooled SDHAP2andMUC20.q-u 2240 to 2391 152 to 1     also hits gene SDHAP1 152/152
(100 %)
1 diff
(99.4 %id)
AA076175.
matches multiple genes
Pancreas SDHAP2andMUC20.q-u 2250 to 2645 1 to 398     also hits gene SC4MOL, SDHAP1 398/398
(100 %)
3 diff
(99.3 %id)
C00498.
matches multiple genes
  SDHAP2andMUC20.q-u 2256 to 2382 1 to 127     also hits gene SDHAP1 127/127
(100 %)
0 diff
(100 %id)
BM696618 eye, lens SDHAP2andMUC20.q-u 2311 to 2960 1 to 650   tiling clone,   650/650
(100 %)
5 diff
(99.3 %id)
BE763888.
matches multiple genes
nervous_tumor SDHAP2andMUC20.q-u 2330 to 2655 26 to 350     also hits gene SDHAP1 325/354
(91 %)
8 diff
(97.8 %id)
BQ344126.
matches multiple genes
nervous_tumor SDHAP2andMUC20.q-u 2373 to 2664 1 to 291     also hits gene SDHAP1 291/298
(97 %)
13 diff
(95.7 %id)
DB301700 amygdala SDHAP2andMUC20.q-u 2398 to 2947 544 to 1       544/544
(100 %)
10 diff
(98.2 %id)
DA085803 cerebellum SDHAP2andMUC20.q-u 2547 to 3110 2 to 564   capped   563/563
(100 %)
14 diff
(97.6 %id)
BG007377 placenta_normal SDHAP2andMUC20.q-u 2771 to 3060 290 to 1   tiling clone,   290/290
(100 %)
0 diff
(100 %id)
AK090759 cerebellum SDHAP2andMUC20.q-u 2814 to 4557 1 to 1744   tiling clone, available from FLJ,   1744/1744
(100 %)
21 diff
(98.8 %id)
DA071029 cerebellum SDHAP2andMUC20.q-u 2815 to 3383 2 to 566   capped   565/565
(100 %)
8 diff
(98.6 %id)
AW753261.
matches multiple genes
colon SDHAP2andMUC20.q-u 2830 to 3241 8 to 419     also hits gene SDHAP1 412/422
(97 %)
13 diff
(97.0 %id)
BM914560 Spleen SDHAP2andMUC20.q-u 2988 to 3729 1 to 745       838/1041
(80 %)
32 diff
(97.0 %id)
BF827618 head_normal SDHAP2andMUC20.q-u 3150 to 3244 1 to 96   tiling clone,   96/102
(94 %)
2 diff
(98.1 %id)
AA776061 schizophrenic brain S-11 frontal lobe SDHAP2andMUC20.q-u 3156 to 3379 1 to 224     Submitted on the opposite strand 224/224
(100 %)
5 diff
(97.8 %id)
CA415238.
matches multiple genes
Knee, Osteoarthritic Cartilage SDHAP2andMUC20.q-u 3332 to 3968 654 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base), also hits gene SDHAP1 638/638
(100 %)
9 diff
(98.6 %id)
BQ216171.
matches multiple genes
embryonal carcinoma, cell line, testis SDHAP2andMUC20.q-u 3335 to 4230 1 to 905   tiling clone, also hits gene SDHAP1 905/906
(99 %)
13 diff
(98.6 %id)
AA367197.
matches multiple genes
Pancreas SDHAP2andMUC20.q-u 3408 to 3664 10 to 267   tiling clone, also hits gene SDHAP1 258/267
(96 %)
6 diff
(97.8 %id)
AW962452.
matches multiple genes
  SDHAP2andMUC20.q-u 3408 to 3983 9 to 585     also hits gene SDHAP1 577/585
(98 %)
6 diff
(99.0 %id)
T74807 Liver SDHAP2andMUC20.q-u 3477 to 3866 1 to 400       400/427
(93 %)
15 diff
(96.5 %id)
AA721506 Ewing's sarcoma SDHAP2andMUC20.q-u 3570 to 3964 400 to 1       400/400
(100 %)
20 diff
(95.0 %id)
BG426392 Kidney SDHAP2andMUC20.q-u 3640 to 4163 1 to 535   tiling clone,   535/1057
(50 %)
12 diff
(98.9 %id)
BM956090 tonsil SDHAP2andMUC20.q-u 3904 to 4186 287 to 1   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 287/297
(96 %)
11 diff
(96.3 %id)
AA369885.
matches multiple genes
Prostate SDHAP2andMUC20.q-u 3978 to 4279 1 to 307   tiling clone, also hits gene SDHAP1 307/307
(100 %)
9 diff
(97.1 %id)
BE328696 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney SDHAP2andMUC20.q-u 3990 to 4560 575 to 1   tiling clone,   575/634
(90 %)
30 diff
(95.3 %id)
DB309325.
matches multiple genes
hippocampus SDHAP2andMUC20.q-u 3998 to 4557 566 to 1   tiling clone, also hits gene SDHAP1 566/566
(100 %)
25 diff
(95.6 %id)
BF990886.
matches multiple genes
placenta_normal SDHAP2andMUC20.q-u 4003 to 4186 188 to 1   tiling clone, also hits gene SDHAP1 188/188
(100 %)
7 diff
(96.3 %id)
DB297516 cerebellum SDHAP2andMUC20.q-u 4090 to 4557 472 to 1       472/479
(98 %)
9 diff
(98.2 %id)
CD707431 normal nasopharynx SDHAP2andMUC20.q-u 4205 to 4849 26 to 671   tiling clone,   646/671
(96 %)
9 diff
(98.7 %id)
AW084291 esophagus, squamous cell carcinoma SDHAP2andMUC20.q-u 4228 to 4562 336 to 1       336/336
(100 %)
4 diff
(98.9 %id)
AJ707036 heart SDHAP2andMUC20.q-u 4592 to 5103 530 to 19   tiling clone, Submitted on the opposite strand 512/550
(93 %)
0 diff
(100 %id)
AJ707825 heart SDHAP2andMUC20.q-u 4592 to 5103 515 to 4     Submitted on the opposite strand 512/536
(95 %)
0 diff
(100 %id)
CV351863 placenta_normal SDHAP2andMUC20.q-u 4617 to 5166 19 to 567       549/620
(88 %)
6 diff
(99.1 %id)
BF921840 nervous_tumor SDHAP2andMUC20.q-u 4707 to 4978 279 to 3     Submitted on the opposite strand 277/279
(99 %)
0 diff
(100 %id)
BI056753 placenta_normal SDHAP2andMUC20.q-u 4977 to 5496 526 to 7       520/567
(91 %)
0 diff
(100 %id)
BI057663 placenta_normal SDHAP2andMUC20.q-u 4979 to 5490 1 to 512   tiling clone,   512/528
(96 %)
13 diff
(97.6 %id)
BF515383   SDHAP2andMUC20.q-u 5034 to 5523 505 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 490/490
(100 %)
1 diff
(99.8 %id)
BE092269 breast SDHAP2andMUC20.q-u 5078 to 5400 1 to 323       323/323
(100 %)
9 diff
(97.3 %id)
BF858504 prostate_tumor SDHAP2andMUC20.q-u 5275 to 5539 30 to 294   tiling clone,   265/294
(90 %)
11 diff
(96.3 %id)
AA682539 liver and spleen SDHAP2andMUC20.q-u 5349 to 5825 477 to 1       477/477
(100 %)
4 diff
(99.2 %id)
BX110152 brain, substantia nigra SDHAP2andMUC20.q-u 5372 to 5830 469 to 10     Submitted on the opposite strand 460/469
(98 %)
0 diff
(100 %id)
DA092111 cerebellum SDHAP2andMUC20.q-u 5375 to 5925 2 to 552   tiling clone, capped   551/551
(100 %)
3 diff
(99.5 %id)
AA805120 brain, substantia nigra SDHAP2andMUC20.q-u 5387 to 5825 439 to 1       439/439
(100 %)
4 diff
(99.1 %id)
BF885473 testis_normal SDHAP2andMUC20.q-u 5388 to 5774 388 to 1     Submitted on the opposite strand 388/388
(100 %)
14 diff
(96.4 %id)
BE815955 breast_normal SDHAP2andMUC20.q-u 5423 to 5675 1 to 251   tiling clone,   251/251
(100 %)
9 diff
(96.5 %id)
AW665736 pooled SDHAP2andMUC20.q-u 5425 to 5825 401 to 1       401/401
(100 %)
4 diff
(99.1 %id)
AI243386 pooled SDHAP2andMUC20.q-u 5434 to 5828 389 to 1       389/404
(96 %)
13 diff
(96.8 %id)
AA976322 2 pooled tumors (clear cell type), Kidney SDHAP2andMUC20.q-u 5503 to 5828 326 to 1       326/326
(100 %)
4 diff
(98.8 %id)
AW362803 colon SDHAP2andMUC20.q-u 5582 to 5819 18 to 255       238/268
(88 %)
8 diff
(97.1 %id)
CN267292 embryonic stem cells, cell lines H1, H7, andH9 SDHAP2andMUC20.r-u 1 to 705 1 to 706   tiling clone,   706/706
(100 %)
4 diff
(99.5 %id)
DB107914 thymus SDHAP2andMUC20.r-u 263 to 757 2 to 499   tiling clone, to resequence, capped   498/498
(100 %)
4 diff
(99.2 %id)
T93809 liver and spleen SDHAP2andMUC20.r-u 758 to 1017 1 to 260   tiling clone, Submitted on the opposite strand 260/260
(100 %)
9 diff
(96.6 %id)
AK000819 adipose tissue SDHAP2andMUC20.r-u 918 to 2247 1330 to 1 exact tiling clone, available from FLJ, Submitted on the opposite strand 1330/1332
(99 %)
5 diff
(99.7 %id)
BM808746 brain, hippocampus SDHAP2andMUC20.r-u 1000 to 1919 1 to 932   tiling clone,   932/1004
(92 %)
34 diff
(96.7 %id)
AW137103   SDHAP2andMUC20.r-u 1343 to 1863 536 to 16   tiling clone, AAA   521/521
(100 %)
2 diff
(99.7 %id)
BF963007 nervous_normal SDHAP2andMUC20.r-u 1498 to 2068 578 to 7       572/579
(98 %)
0 diff
(100 %id)
AI056765 liver and spleen SDHAP2andMUC20.r-u 1546 to 1864 317 to 1       317/317
(100 %)
7 diff
(97.8 %id)
AA700668 liver and spleen SDHAP2andMUC20.r-u 1547 to 1863 314 to 1       314/314
(100 %)
6 diff
(98.1 %id)
R08314 liver and spleen SDHAP2andMUC20.r-u 1599 to 1856 260 to 2       259/325
(79 %)
0 diff
(100 %id)
N59019 liver and spleen SDHAP2andMUC20.r-u 1607 to 1858 32 to 282   fully sequenced,   251/282
(89 %)
6 diff
(97.9 %id)
N53925 liver and spleen SDHAP2andMUC20.r-u 1630 to 1864 233 to 1   fully sequenced,   233/233
(100 %)
2 diff
(99.2 %id)
BM929820 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SDHAP2andMUC20.r-u 1833 to 2403 1 to 571   tiling clone, fully sequenced,   571/571
(100 %)
0 diff
(100 %id)
BM929941 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SDHAP2andMUC20.r-u 1833 to 2395 1 to 563   fully sequenced,   563/563
(100 %)
0 diff
(100 %id)
DB343097 thymus SDHAP2andMUC20.r-u 1836 to 2383 548 to 1   to resequence,   548/548
(100 %)
0 diff
(100 %id)
BF194882 Kidney SDHAP2andMUC20.r-u 1881 to 2383 503 to 1       503/503
(100 %)
0 diff
(100 %id)
AW302615 brain, three pooled meningiomas SDHAP2andMUC20.r-u 1947 to 2388 442 to 1       442/442
(100 %)
3 diff
(99.4 %id)
T91047 liver and spleen SDHAP2andMUC20.r-u 1949 to 2381 443 to 4       440/443
(99 %)
0 diff
(100 %id)
DB516708 testis SDHAP2andMUC20.r-u 1965 to 2404 1 to 440     Submitted on the opposite strand 440/440
(100 %)
2 diff
(99.6 %id)
AA913635 Kidney SDHAP2andMUC20.r-u 1994 to 2404 431 to 21   AAA   411/411
(100 %)
3 diff
(99.3 %id)
AI765662 2 pooled tumors (clear cell type), Kidney SDHAP2andMUC20.r-u 2013 to 2406 396 to 4       393/396
(99 %)
0 diff
(100 %id)
BM684364 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SDHAP2andMUC20.r-u 2099 to 2404 324 to 19   fully sequenced, AAA   306/306
(100 %)
0 diff
(100 %id)
BM684261 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SDHAP2andMUC20.r-u 2127 to 2404 296 to 19   fully sequenced, AAA   278/278
(100 %)
0 diff
(100 %id)
AA913173 Kidney SDHAP2andMUC20.r-u 2172 to 2404 253 to 21   AAA   233/233
(100 %)
0 diff
(100 %id)
BF932293 nervous_tumor SDHAP2andMUC20.r-u 2276 to 2724 449 to 1   tiling clone, Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
BG984666 colon_normal SDHAP2andMUC20.r-u 2722 to 2834 1 to 113   tiling clone,   113/113
(100 %)
0 diff
(100 %id)
BI059382 placenta_normal SDHAP2andMUC20.r-u 2722 to 2834 1 to 113       113/113
(100 %)
0 diff
(100 %id)
DA834024 placenta SDHAP2andMUC20.r-u 2740 to 3204 2 to 466   tiling clone, capped   465/466
(99 %)
4 diff
(99.2 %id)
BI039750 nervous_tumor SDHAP2andMUC20.r-u 2797 to 3166 376 to 6       371/383
(96 %)
0 diff
(100 %id)
BF819851 kidney_tumor SDHAP2andMUC20.r-u 2876 to 3330 491 to 33   tiling clone, Submitted on the opposite strand 459/509
(90 %)
0 diff
(100 %id)
BI040691 nervous_tumor SDHAP2andMUC20.r-u 2891 to 3224 336 to 1   tiling clone,   336/336
(100 %)
12 diff
(96.5 %id)
BF819909 kidney_tumor SDHAP2andMUC20.r-u 2912 to 3187 13 to 286       274/289
(94 %)
6 diff
(98.0 %id)
BF819912 kidney_tumor SDHAP2andMUC20.r-u 2913 to 3276 391 to 29   tiling clone, Submitted on the opposite strand 363/391
(92 %)
0 diff
(100 %id)
BF820165 kidney_tumor SDHAP2andMUC20.r-u 2950 to 3082 1 to 132       132/132
(100 %)
4 diff
(97.0 %id)
DB381078 placenta SDHAP2andMUC20.r-u 4172 to 4638 470 to 1   tiling clone,   470/552
(85 %)
12 diff
(97.9 %id)
BI004079 head_normal SDHAP2andMUC20.r-u 4265 to 4523 260 to 1   tiling clone,   260/264
(98 %)
5 diff
(98.2 %id)
DC405854 thymus SDHAP2andMUC20.s 1 to 590 1 to 590 W64R F87L K127R tiling clone,   590/590
(100 %)
6 diff
(99.0 %id)
BI036471 nervous_tumor SDHAP2andMUC20.s 253 to 411 165 to 7   tiling clone,   159/165
(96 %)
0 diff
(100 %id)
BI009769 kidney_tumor SDHAP2andMUC20.s 273 to 442 11 to 180       170/180
(94 %)
6 diff
(96.7 %id)
CV413446.
matches multiple genes
placenta_normal SDHAP2andMUC20.t 1 to 476 485 to 13 P12S C32Y N69S K72Q R98P ... tiling clone, Submitted on the opposite strand, also hits gene SDHAP1 473/485
(97 %)
4 diff
(99.2 %id)
CV413463.
matches multiple genes
placenta_normal SDHAP2andMUC20.t 38 to 437 402 to 4   tiling clone, Submitted on the opposite strand, also hits gene SDHAP1 399/402
(99 %)
6 diff
(98.6 %id)
DA875776 Prostate SDHAP2andMUC20.u 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
1 diff
(99.9 %id)
BX483856   SDHAP2andMUC20.u 125 to 428 1 to 304   tiling clone,   304/304
(100 %)
0 diff
(100 %id)
BE839148 prostate_normal SDHAP2andMUC20.u 589 to 883 9 to 303   tiling clone,   295/323
(91 %)
8 diff
(97.6 %id)
BF509179   SDHAP2andMUC20.va 1 to 696 705 to 17 T4P F5C A6V V7L L8D ... tiling clone,   689/705
(97 %)
12 diff
(98.3 %id)
BE161939 head_neck SDHAP2andMUC20.va 378 to 681 316 to 13     Submitted on the opposite strand 304/316
(96 %)
0 diff
(100 %id)
AW337609 lung, two pooled squamous cell carcinomas SDHAP2andMUC20.va 386 to 695 312 to 1       312/321
(97 %)
17 diff
(94.8 %id)
AA770276   SDHAP2andMUC20.va 558 to 695 138 to 1       138/142
(97 %)
0 diff
(100 %id)
AA932256 2 pooled tumors (clear cell type), Kidney SDHAP2andMUC20.va 560 to 696 139 to 3       137/139
(98 %)
0 diff
(100 %id)
CB052015.
matches multiple genes
leiomyosarcoma, soft tissue SDHAP2andMUC20.vb 1 to 531 10 to 541   tiling clone, fully sequenced, Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base), also hits gene SDHAP1 532/541
(98 %)
7 diff
(98.8 %id)
CB052014.
matches multiple genes
leiomyosarcoma, soft tissue SDHAP2andMUC20.vb 501 to 1068 606 to 33   tiling clone, fully sequenced, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base), also hits gene SDHAP1 574/574
(100 %)
22 diff
(96.2 %id)
BU616109.
matches multiple genes
Bone, Subchondral Bone SDHAP2andMUC20.vc 1 to 673 691 to 19 M9V G22Q E32K D33X Q37R ... tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base), also hits gene SDHAP1 673/673
(100 %)
17 diff
(97.5 %id)
AW609616.
matches multiple genes
stomach SDHAP2andMUC20.vc 186 to 366 181 to 1     also hits gene SDHAP1 181/182
(99 %)
11 diff
(94.0 %id)
H38405.
matches multiple genes
brain SDHAP2andMUC20.vc 301 to 677 385 to 1   tiling clone, also hits gene SDHAP1 385/385
(100 %)
14 diff
(96.4 %id)
DA291917 hippocampus SDHAP2andMUC20.vd 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
2 diff
(99.7 %id)
AW175688 breast SDHAP2andMUC20.vd 353 to 783 1 to 432       432/432
(100 %)
23 diff
(94.7 %id)
BF819677 kidney_tumor SDHAP2andMUC20.vd 372 to 844 1 to 471       471/471
(100 %)
12 diff
(97.5 %id)
BF836054 head_neck SDHAP2andMUC20.vd 372 to 821 451 to 2   tiling clone, Submitted on the opposite strand 450/477
(94 %)
0 diff
(100 %id)
BF838330 head_neck SDHAP2andMUC20.vd 372 to 821 451 to 2     Submitted on the opposite strand 450/477
(94 %)
0 diff
(100 %id)
BF930995 nervous_tumor SDHAP2andMUC20.vd 374 to 760 1 to 385       385/385
(100 %)
12 diff
(96.9 %id)
BF819670 kidney_tumor SDHAP2andMUC20.vd 381 to 850 1 to 466   tiling clone,   466/469
(99 %)
14 diff
(97.1 %id)
BF819486 kidney_tumor SDHAP2andMUC20.vd 382 to 844 4 to 469       466/469
(99 %)
6 diff
(98.8 %id)
BF819813 kidney_tumor SDHAP2andMUC20.vd 386 to 834 450 to 1   tiling clone, Submitted on the opposite strand 450/450
(100 %)
3 diff
(99.4 %id)
BF931371 nervous_tumor SDHAP2andMUC20.vd 386 to 780 1 to 395       395/395
(100 %)
4 diff
(99.0 %id)
BF819485 kidney_tumor SDHAP2andMUC20.vd 403 to 844 24 to 467   tiling clone,   444/467
(95 %)
6 diff
(98.8 %id)
BF819491 kidney_tumor SDHAP2andMUC20.vd 427 to 844 1 to 421       421/421
(100 %)
12 diff
(97.2 %id)
BF823238 kidney_tumor SDHAP2andMUC20.vd 524 to 809 288 to 1     Submitted on the opposite strand 288/289
(99 %)
12 diff
(95.9 %id)
DC414622 trachea SDHAP2andMUC20.ve 1 to 579 1 to 579 exact tiling clone,   579/579
(100 %)
2 diff
(99.7 %id)
DA222525 brain SDHAP2andMUC20.ve 104 to 740 2 to 638   tiling clone, capped   637/637
(100 %)
5 diff
(99.3 %id)
BC062438 Pooled, 40 cell lines SDHAP2andMUC20.vf 1 to 1274 5 to 1278 R71G tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 1278/1278
(100 %)
3 diff
(99.8 %id)
R85957 eye, retina SDHAP2andMUC20.vf 748 to 1145 1 to 416     Submitted on the opposite strand 416/427
(97 %)
25 diff
(94.2 %id)
BG577044.
matches multiple genes
breast, mammary adenocarcinoma, cell line SDHAP2andMUC20.vf 1174 to 1872 1 to 694   tiling clone, also hits gene SDHAP1 694/694
(100 %)
7 diff
(99.0 %id)
BQ333069 lung_tumor SDHAP2andMUC20.vf 1556 to 2027 1 to 474   tiling clone,   474/474
(100 %)
18 diff
(96.3 %id)
AA728932 Prostate, tumor SDHAP2andMUC20.vf 1583 to 2011 429 to 1       429/429
(100 %)
3 diff
(99.4 %id)
CR744914.
matches multiple genes
anaplastic oligodendroglioma, brain SDHAP2andMUC20.vf 1702 to 2347 1 to 648   tiling clone, also hits gene SDHAP1 648/648
(100 %)
4 diff
(99.4 %id)
AW845509.
matches multiple genes
colon SDHAP2andMUC20.vf 1803 to 2056 26 to 279     also hits gene SDHAP1 254/279
(91 %)
6 diff
(97.9 %id)
AW845418 colon SDHAP2andMUC20.vf 1806 to 2076 1 to 270       270/270
(100 %)
5 diff
(98.2 %id)
AW845440.
matches multiple genes
colon SDHAP2andMUC20.vf 1806 to 2080 276 to 3     also hits gene SDHAP1 274/276
(99 %)
0 diff
(100 %id)
AW845477.
matches multiple genes
colon SDHAP2andMUC20.vf 1806 to 2072 300 to 36     also hits gene SDHAP1 265/300
(88 %)
0 diff
(100 %id)
BQ321041.
matches multiple genes
colon SDHAP2andMUC20.vf 1806 to 2079 290 to 19     also hits gene SDHAP1 272/290
(93 %)
0 diff
(100 %id)
AW845494 colon SDHAP2andMUC20.vf 1823 to 2081 1 to 254       254/256
(99 %)
12 diff
(95.4 %id)
AW845448 colon SDHAP2andMUC20.vf 1826 to 2083 11 to 269       259/269
(96 %)
6 diff
(97.8 %id)
AI870646.
matches multiple genes
anaplastic oligodendroglioma, brain SDHAP2andMUC20.vf 1865 to 2408 549 to 5   tiling clone, also hits gene SDHAP1, slunawbo 545/549
(99 %)
0 diff
(100 %id)
AW845493.
matches multiple genes
colon SDHAP2andMUC20.vf 1873 to 2074 217 to 10     also hits gene SDHAP1 208/223
(93 %)
0 diff
(100 %id)
BF435257.
matches multiple genes
pooled SDHAP2andMUC20.vf 1921 to 2408 490 to 1   tiling clone, also hits gene SDHAP1 490/490
(100 %)
3 diff
(99.4 %id)
AI360398.
matches multiple genes
anaplastic oligodendroglioma, brain SDHAP2andMUC20.vf 1947 to 2408 466 to 4     also hits gene SDHAP1, slunawbo 463/466
(99 %)
0 diff
(100 %id)
AI369836.
matches multiple genes
anaplastic oligodendroglioma, brain SDHAP2andMUC20.vf 1951 to 2408 463 to 5   tiling clone, also hits gene SDHAP1, slunawbo 459/463
(99 %)
0 diff
(100 %id)
DA571943 whole embryo, mainly body SDHAP2andMUC20.vf 2179 to 2964 2 to 787   tiling clone, capped   786/788
(99 %)
4 diff
(99.5 %id)
AI926637.
matches multiple genes
poorly differentiated adenocarcinoma withsignet ring cell features, stomach SDHAP2andMUC20.vf 2251 to 2394 179 to 36   AAA also hits gene SDHAP1 144/155
(92 %)
0 diff
(100 %id)
DB145315.
matches multiple genes
thymus SDHAP2andMUC20.vf 2514 to 2982 2 to 467   tiling clone, capped also hits gene somumo 466/466
(100 %)
16 diff
(96.6 %id)
DA761450 tongue SDHAP2andMUC20.vg 1 to 465 2 to 466   tiling clone, to resequence, capped   465/465
(100 %)
3 diff
(99.4 %id)
DB325329 tongue SDHAP2andMUC20.vg 1301 to 1800 500 to 1 D78N V95M tiling clone, to resequence,   500/500
(100 %)
2 diff
(99.6 %id)
CB962505 Blood vessels - aorta, basilar and artery SDHAP2andMUC20.vh-u 1 to 653 1 to 655   tiling clone,   655/784
(83 %)
28 diff
(96.5 %id)
DB451219 testis SDHAP2andMUC20.vh-u 280 to 758 3 to 482       480/482
(99 %)
5 diff
(99.0 %id)
AV689058 hepatocellular carcinoma SDHAP2andMUC20.vh-u 381 to 756 9 to 384   tiling clone, AAA Possibly primed on the genome, locally A rich (28/28 A in genome downstream of last aligned base) 376/384
(97 %)
6 diff
(98.5 %id)
BX645498   SDHAP2andMUC20.vh-u 502 to 1200 1 to 692   tiling clone,   692/692
(100 %)
20 diff
(97.2 %id)
BF908347 uterus_tumor SDHAP2andMUC20.vh-u 520 to 778 311 to 51     Submitted on the opposite strand 261/311
(83 %)
11 diff
(96.5 %id)
AI364401 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.vh-u 598 to 766 169 to 1       169/169
(100 %)
6 diff
(96.5 %id)
AI364238 serous papillary carcinoma, high grade, 2pooled tumors, uterus SDHAP2andMUC20.vh-u 599 to 779 181 to 1       181/181
(100 %)
1 diff
(99.5 %id)
AV749218 Pituitary SDHAP2andMUC20.vh-u 804 to 1114 1 to 300       300/327
(91 %)
8 diff
(97.6 %id)
BF352980 head_neck SDHAP2andMUC20.vh-u 822 to 1097 277 to 1   tiling clone,   277/277
(100 %)
4 diff
(98.6 %id)
BE094706 breast SDHAP2andMUC20.vh-u 1099 to 1468 372 to 3   tiling clone, Submitted on the opposite strand 370/388
(95 %)
0 diff
(100 %id)
BE094705 breast SDHAP2andMUC20.vh-u 1135 to 1483 380 to 24   tiling clone, Submitted on the opposite strand 357/380
(93 %)
0 diff
(100 %id)
AW291435   SDHAP2andMUC20.vh-u 1345 to 1753 426 to 18 G7A W67R tiling clone, AAA Possibly primed on the genome, locally A rich (28/28 A in genome downstream of last aligned base) 409/409
(100 %)
3 diff
(99.3 %id)
DB143658 thymus SDHAP2andMUC20.vi-u 1 to 501 2 to 509   tiling clone, capped   508/508
(100 %)
5 diff
(99.1 %id)
AW847743 colon SDHAP2andMUC20.vi-u 278 to 687 418 to 1   tiling clone,   418/418
(100 %)
20 diff
(95.3 %id)
DB132309 thymus SDHAP2andMUC20.vi-u 592 to 1118 2 to 530   tiling clone, capped   529/529
(100 %)
5 diff
(99.1 %id)
DB065631 testis SDHAP2andMUC20.vi-u 934 to 1494 2 to 564 G25X L26A Q27P G28R H29A ... tiling clone, capped   563/563
(100 %)
12 diff
(97.9 %id)
BF928735 nervous_tumor SDHAP2andMUC20.vi-u 1176 to 1401 13 to 238   tiling clone,   226/238
(94 %)
6 diff
(97.5 %id)
BQ708081 Spleen SDHAP2andMUC20.vj-u 1 to 588 1 to 594 exact tiling clone,   594/1273
(46 %)
23 diff
(98.2 %id)
BQ709607 Spleen SDHAP2andMUC20.vj-u 1 to 828 1 to 833 exact tiling clone,   833/874
(95 %)
21 diff
(97.6 %id)
W90791.
matches multiple genes
liver and spleen SDHAP2andMUC20.vj-u 483 to 966 1 to 487   tiling clone, fully sequenced, also hits gene SDHAP1 487/487
(100 %)
8 diff
(98.4 %id)
W90697.
matches multiple genes
liver and spleen SDHAP2andMUC20.vj-u 483 to 926 1 to 448   tiling clone, fully sequenced, also hits gene SDHAP1 448/448
(100 %)
8 diff
(98.3 %id)
AW362071 colon SDHAP2andMUC20.vj-u 689 to 1159 486 to 17   tiling clone,   470/486
(96 %)
0 diff
(100 %id)
BF002426.
matches multiple genes
colon, colon tumor, RER+ SDHAP2andMUC20.vj-u 791 to 1242 457 to 4     also hits gene SDHAP1 454/457
(99 %)
0 diff
(100 %id)
W90764.
matches multiple genes
liver and spleen SDHAP2andMUC20.vj-u 896 to 1246 356 to 1   tiling clone, fully sequenced, also hits gene SDHAP1 356/356
(100 %)
5 diff
(98.6 %id)
AI384129.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SDHAP2andMUC20.vj-u 904 to 1250 347 to 1     also hits gene SDHAP1 347/347
(100 %)
9 diff
(97.5 %id)
AI242382.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SDHAP2andMUC20.vj-u 911 to 1250 341 to 1   tiling clone, also hits gene SDHAP1 341/341
(100 %)
10 diff
(97.1 %id)
W90321.
matches multiple genes
liver and spleen SDHAP2andMUC20.vj-u 936 to 1246 314 to 1   tiling clone, fully sequenced, also hits gene SDHAP1 314/314
(100 %)
6 diff
(98.1 %id)
DW421070 Liver SDHAP2andMUC20.vj-u 964 to 1245 17 to 298   tiling clone,   282/298
(94 %)
6 diff
(98.0 %id)
AI368509 anaplastic oligodendroglioma, brain SDHAP2andMUC20.vj-u 1046 to 1246 201 to 1       201/202
(99 %)
7 diff
(96.6 %id)
BF807699.
matches multiple genes
colon_ins SDHAP2andMUC20.vk 1 to 305 323 to 15   tiling clone, Submitted on the opposite strand, also hits gene LOC220729, tarkawbo 309/323
(95 %)
0 diff
(100 %id)
BF334381.
matches multiple genes
colon SDHAP2andMUC20.vk 244 to 754 7 to 517 H13Q tiling clone, also hits gene LOC220729 511/517
(98 %)
6 diff
(98.9 %id)
AA442681   SDHAP2andMUC20.vk 665 to 989 1 to 323   tiling clone,   323/385
(83 %)
4 diff
(99.0 %id)
BE932325 head_neck SDHAP2andMUC20.vk 740 to 1231 518 to 27   tiling clone,   490/518
(94 %)
10 diff
(98.1 %id)
BE932353 head_neck SDHAP2andMUC20.vk 740 to 1231 518 to 27       490/518
(94 %)
10 diff
(98.1 %id)
DA513821 brain SDHAP2andMUC20.vl-u 1 to 576 2 to 577   tiling clone, capped   576/576
(100 %)
1 diff
(99.9 %id)
H54784 liver and spleen SDHAP2andMUC20.vl-u 349 to 781 1 to 441   tiling clone, Submitted on the opposite strand 441/441
(100 %)
13 diff
(97.1 %id)
BF373209 prostate_tumor SDHAP2andMUC20.vl-u 693 to 973 1 to 280       280/280
(100 %)
3 diff
(99.0 %id)
BF371262 prostate_normal SDHAP2andMUC20.vl-u 697 to 988 308 to 13   tiling clone,   296/308
(96 %)
0 diff
(100 %id)
CV408411 prostate_tumor SDHAP2andMUC20.vl-u 697 to 1048 373 to 19   tiling clone, Submitted on the opposite strand 355/419
(84 %)
0 diff
(100 %id)
AA448597.
matches multiple genes
  SDHAP2andMUC20.vm 1 to 438 1 to 438   tiling clone, also hits gene SDHAP1 438/439
(99 %)
3 diff
(99.4 %id)
AA449740.
matches multiple genes
  SDHAP2andMUC20.vm 500 to 966 467 to 1 A29T tiling clone, also hits gene SDHAP1 467/467
(100 %)
7 diff
(98.6 %id)
DC412775.
matches multiple genes
liver, tumor tissue SDHAP2andMUC20.vn 1 to 563 1 to 563   tiling clone, also hits gene SDHAP1 563/563
(100 %)
5 diff
(99.2 %id)
DB283400.
matches multiple genes
uterus SDHAP2andMUC20.vn 406 to 952 2 to 548   tiling clone, capped also hits gene SDHAP1 547/547
(100 %)
3 diff
(99.5 %id)
CX753152 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass SDHAP2andMUC20.vo 1 to 740 1 to 730 S6A A7L R8G R9A L10W ... tiling clone, Submitted on the opposite strand 730/754
(96 %)
15 diff
(98.1 %id)
BE927437 colon SDHAP2andMUC20.vp 1 to 359 393 to 34 M62I A64G S65L A66S L67N ... tiling clone,   360/393
(91 %)
12 diff
(97.0 %id)
BE927445 colon SDHAP2andMUC20.vp 1 to 364 384 to 24 A64H L73F tiling clone,   361/384
(94 %)
0 diff
(100 %id)
BG983179 colon_normal SDHAP2andMUC20.vp 207 to 690 1 to 484   tiling clone,   484/484
(100 %)
2 diff
(99.6 %id)
DA314441 hippocampus SDHAP2andMUC20.vq 1 to 494 2 to 495 exact tiling clone, capped   494/494
(100 %)
0 diff
(100 %id)
BG722103 testis SDHAP2andMUC20.vq 22 to 640 1 to 620 exact tiling clone,   620/620
(100 %)
10 diff
(98.4 %id)
CB046730 2 pooled tumors (clear cell type), Kidney SDHAP2andMUC20.vr 1 to 603 645 to 43 exact tiling clone, AAA   603/603
(100 %)
3 diff
(99.6 %id)
AW300120 Kidney SDHAP2andMUC20.vr 91 to 604 517 to 4 exact tiling clone,   514/517
(99 %)
1 diff
(99.9 %id)
BQ448579 Knee, Osteoarthritic Cartilage SDHAP2andMUC20.vr 111 to 603 509 to 17 exact AAA   493/502
(98 %)
4 diff
(99.3 %id)
AW300106 Kidney SDHAP2andMUC20.vr 142 to 604 466 to 4 exact     463/466
(99 %)
0 diff
(100 %id)
AI307635 2 pooled tumors (clear cell type), Kidney SDHAP2andMUC20.vr 181 to 604 427 to 4 exact tiling clone,   424/427
(99 %)
0 diff
(100 %id)
DA225151 brain SDHAP2andMUC20.vs-u 1 to 568 2 to 569 I11T G15R tiling clone, capped   568/568
(100 %)
4 diff
(99.3 %id)
BQ323030 colon_est SDHAP2andMUC20.vs-u 178 to 600 1 to 423   tiling clone,   423/423
(100 %)
8 diff
(98.2 %id)
DA127530 cerebellum SDHAP2andMUC20.vt-u 1 to 586 2 to 587 exact tiling clone, capped   586/586
(100 %)
1 diff
(99.9 %id)
BG984302 colon_normal SDHAP2andMUC20.vt-u 388 to 525 29 to 165       137/169
(81 %)
5 diff
(97.1 %id)
DB108938.
matches multiple genes
thymus SDHAP2andMUC20.vu 1 to 582 2 to 583 E39A tiling clone, capped also hits gene SDHAP1 582/582
(100 %)
1 diff
(99.9 %id)
CN264415.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 SDHAP2andMUC20.vu 12 to 578 1 to 567 E39A tiling clone, also hits gene SDHAP1 567/567
(100 %)
2 diff
(99.7 %id)
DA051379   SDHAP2andMUC20.vv 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
5 diff
(99.2 %id)
DA199172.
matches multiple genes
brain SDHAP2andMUC20.vw 1 to 569 2 to 571 G17A tiling clone, capped also hits gene LOC220729, SDHAP1 570/570
(100 %)
7 diff
(98.8 %id)
DA006694.
matches multiple genes
  SDHAP2andMUC20.vx 2 to 572 2 to 572 A19V T21R P31L Y49H C54* tiling clone, capped also hits gene LOC220729 571/571
(100 %)
14 diff
(97.6 %id)
DB482107.
matches multiple genes
hippocampus SDHAP2andMUC20.vx 102 to 455 127 to 480     also hits gene LOC220729 480/480
(100 %)
8 diff
(98.4 %id)
DB226558 trachea SDHAP2andMUC20.vy-u 1 to 517 50 to 566 exact tiling clone, capped   517/565
(91 %)
8 diff
(98.6 %id)
AA367556.
matches multiple genes
placenta SDHAP2andMUC20.vy-u 195 to 524 1 to 330     also hits gene SDHAP1 330/330
(100 %)
2 diff
(99.4 %id)
W24432.
matches multiple genes
lung SDHAP2andMUC20.vy-u 254 to 542 1 to 292   tiling clone, also hits gene SDHAP1 292/432
(67 %)
5 diff
(98.9 %id)
BY995009   SDHAP2andMUC20.vz-u 1 to 524 22 to 545 exact tiling clone,   524/545
(96 %)
6 diff
(98.9 %id)
DA883052   SDHAP2andMUC20.wa 1 to 518 8 to 525 exact tiling clone, capped   524/524
(100 %)
5 diff
(99.1 %id)
BF929200 nervous_tumor SDHAP2andMUC20.wb-u 1 to 205 218 to 14   tiling clone, Submitted on the opposite strand 205/218
(94 %)
13 diff
(94.1 %id)
BQ370815 placenta_normal SDHAP2andMUC20.wb-u 137 to 474 21 to 358 exact tiling clone,   338/359
(94 %)
7 diff
(98.1 %id)
BU960796 mixed (pool of 40 RNAs) SDHAP2andMUC20.wb-u 267 to 413 1 to 147   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 147/183
(80 %)
2 diff
(99.0 %id)
BF823653 kidney_tumor SDHAP2andMUC20.wc-u 1 to 409 409 to 1 exact tiling clone, Submitted on the opposite strand 409/409
(100 %)
2 diff
(99.6 %id)
BX470560   SDHAP2andMUC20.wc-u 12 to 242 1 to 231       231/231
(100 %)
4 diff
(98.3 %id)
AI624645 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SDHAP2andMUC20.wc-u 46 to 430 385 to 1   tiling clone,   385/385
(100 %)
2 diff
(99.5 %id)
BF928797 nervous_tumor SDHAP2andMUC20.we 1 to 260 1 to 262 K3N Q7H M8D V9G L10A ... tiling clone,   262/262
(100 %)
13 diff
(95.1 %id)
BF770667 epid_tumor SDHAP2andMUC20.wf 1 to 210 1 to 210 K2R T4P tiling clone,   210/213
(98 %)
7 diff
(96.8 %id)
BF822352 kidney_tumor SDHAP2andMUC20.wf 1 to 209 1 to 209 K2R T4P     209/209
(100 %)
6 diff
(97.2 %id)
BM153669 leukopheresis Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AA372384 colon Gene SDHAP2andMUC20, variant not shown              
AB037780 brain Gene SDHAP2andMUC20, variant not shown       available from KIAA, This clone was ignored    
AB098731   Gene SDHAP2andMUC20, variant not shown       AAA This clone was ignored    
AK027314 whole embryo, mainly head Gene SDHAP2andMUC20, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AK298316 Kidney Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AK311504 placenta Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AW859967 colon Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AW860018 colon Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AY358449   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BC029267 Colon, adenocarcinoma Gene SDHAP2andMUC20, variant not shown       available from MGC, AAA This clone was ignored    
BC041016 Placenta, choriocarcinoma Gene SDHAP2andMUC20, variant not shown       available from MGC, AAA This clone was ignored    
BC044243 Brain, Lung, Testis, adult, pooled whole Gene SDHAP2andMUC20, variant not shown       available from MGC, AAA This clone was ignored    
BE075866 breast Gene SDHAP2andMUC20, variant not shown         Submitted on the opposite strand    
BE162667 head_neck Gene SDHAP2andMUC20, variant not shown         Submitted on the opposite strand    
BF803415 colon_ins Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
BF989936 placenta_normal Gene SDHAP2andMUC20, variant not shown              
BI007991 kidney_tumor Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI008120 kidney_tumor Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI009710 kidney_tumor Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI009717 kidney_tumor Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI009734 kidney_tumor Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI042963 ovary Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI042990 ovary Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BQ367657 placenta_normal Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DA117606 cerebellum Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
BX108925 liver and spleen Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
CD688912 normal nasopharynx Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
CN263302 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AL110456 testis Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
BX491553   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BX491554   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BJ995492 hepatoblastoma Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
T83670 liver and spleen Gene SDHAP2andMUC20, variant not shown       fully sequenced, This clone was ignored    
T83834 liver and spleen Gene SDHAP2andMUC20, variant not shown       fully sequenced, This clone was ignored    
N74272 lung Gene SDHAP2andMUC20, variant not shown       fully sequenced, This clone was ignored    
W04363 lung Gene SDHAP2andMUC20, variant not shown       fully sequenced, This clone was ignored    
AA393986   Gene SDHAP2andMUC20, variant not shown       fully sequenced, This clone was ignored    
AA398023   Gene SDHAP2andMUC20, variant not shown       fully sequenced, This clone was ignored    
AA830468.
matches multiple genes
germinal center B cell Gene SDHAP1, variant not shown       AAA Suspected internal deletion, this clone was ignored, also hits gene SDHAP1    
AA830468.
matches multiple genes
germinal center B cell Gene SDHAP2andMUC20, variant not shown       AAA Suspected internal deletion, this clone was ignored, also hits gene SDHAP1    
AA918912 Kidney Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AI018028   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AI052117 parathyroid gland, parathyroid tumor Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
AI057562.
matches multiple genes
parathyroid gland, parathyroid tumor Gene SDHAP1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene SDHAP1    
AI057562.
matches multiple genes
parathyroid gland, parathyroid tumor Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene SDHAP1    
AI580501 Kidney Gene SDHAP2andMUC20, variant not shown       AAA This clone was ignored    
AW081040 colon, moderately differentiated adenocarcinoma Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AW627885 2 pooled high-grade transitional celltumors, genitourinary tract Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
AW662986 2 pooled high-grade transitional celltumors, genitourinary tract Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
BF508771   Gene SDHAP2andMUC20, variant not shown       AAA This clone was ignored    
BM986861 mixed Gene SDHAP2andMUC20, variant not shown       AAA This clone was ignored    
BE349991 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BE872017 adenocarcinoma, colon Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BG824151 adenocarcinoma cell line, colon Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI822546 pooled brain, lung, testis Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BI821600 pooled brain, lung, testis Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
BI819706 pooled brain, lung, testis Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BM922204 pooled brain, lung, testis Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BU790237.
matches multiple genes
Pancreas, Purified pancreatic islet Gene SDHAP2andMUC20, variant not shown         This clone was ignored, also hits gene kawsweyby    
BU790237.
matches multiple genes
Pancreas, Purified pancreatic islet Gene kawsweyby, variant not shown         This clone was ignored, also hits gene kawsweyby    
BQ940806 sciatic nerve Gene SDHAP2andMUC20, variant not shown       AAA This clone was ignored    
TI_57198142   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_57199291   Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
TI_57200254   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BP271923   Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
BP277539 Kidney Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DC362031 Kidney Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DC362310 Kidney Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DC362574 Liver Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DC362768 Liver Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
NM_152673.2   Gene SDHAP2andMUC20, variant not shown       RefSeq, AAA This clone was ignored    
NM_001098516.1   Gene SDHAP2andMUC20, variant not shown       RefSeq, AAA This clone was ignored    
DC424279.
matches multiple genes
  Gene SDHAP1, variant not shown         This clone was ignored, also hits gene SDHAP1    
DC424279.
matches multiple genes
  Gene SDHAP2andMUC20, variant not shown         This clone was ignored, also hits gene SDHAP1    
DC427132.
matches multiple genes
  Gene SDHAP1, variant not shown         This clone was ignored, also hits gene SDHAP1    
DC427132.
matches multiple genes
  Gene SDHAP2andMUC20, variant not shown         This clone was ignored, also hits gene SDHAP1    
DB367250   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DA735075   Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
AU153706   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
AU132100   Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
DB375294 placenta Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DA830222 placenta Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
DA845395 placenta Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
DA874240.
matches multiple genes
Prostate Gene SDHAP1, variant not shown       capped This clone was ignored, also hits gene SDHAP1    
DA874240.
matches multiple genes
Prostate Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored, also hits gene SDHAP1    
BP328302 rectum Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948138215   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948138508   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948138509   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948138806   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948138807   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948139120   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948213552   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
TI_1948213553   Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DA935799 Spleen Gene SDHAP2andMUC20, variant not shown       capped Suspected internal deletion, this clone was ignored    
DC390006.
matches multiple genes
Spleen Gene SDHAP1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene SDHAP1    
DC390006.
matches multiple genes
Spleen Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene SDHAP1    
DR004615 placenta Gene SDHAP2andMUC20, variant not shown         Suspected internal deletion, this clone was ignored    
BE245242 leukopheresis Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BE246439 leukopheresis Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DB123328 thymus Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
DB136256.
matches multiple genes
thymus Gene SDHAP1, variant not shown       capped This clone was ignored, also hits gene SDHAP1    
DB136256.
matches multiple genes
thymus Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored, also hits gene SDHAP1    
DB146299 thymus Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
DB150304 thymus Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DB346071 thymus Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DB151854 thymus Gene SDHAP2andMUC20, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB346193 thymus Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
DB151856 thymus Gene SDHAP2andMUC20, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB193354 ovary, tumor tissue Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
DB245735 uterus, tumor tissue Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored    
BQ022911 placenta Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BM983991 lung, Primary Lung Epithelial Cells Gene SDHAP2andMUC20, variant not shown         This clone was ignored    
BM671641 eye, optic nerve Gene SDHAP2andMUC20, variant not shown       AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base)    
BM704496 eye, optic nerve Gene SDHAP2andMUC20, variant not shown         Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base)    
DB289151.
matches multiple genes
uterus Gene SDHAP1, variant not shown       capped This clone was ignored, also hits gene SDHAP1    
DB289151.
matches multiple genes
uterus Gene SDHAP2andMUC20, variant not shown       capped This clone was ignored, also hits gene SDHAP1    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u, .q-u, .r-u, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh-u, .vi-u, .vj-u, .vk, .vl-u, .vm, .vn, .vo, .vp, .vq, .vr, .vs-u, .vt-u, .vu, .vv, .vw, .vx, .vy-u, .vz-u, .wa, .wb-u, .wc-u, .wd-u, .we, .wf Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI