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Gene SHISA5TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
614 representative clones for gene SHISA5 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC385306 rectum .a 1 to 503 1 to 503   tiling clone,   503/503
(100 %)
1 diff
(99.9 %id)
AK298842   .a 4 to 1742 1 to 1739   tiling clone,   1739/1741
(99 %)
1 diff
(100.0 %id)
DC366228   .a 4 to 558 1 to 555       555/555
(100 %)
0 diff
(100 %id)
DC366254   .a 4 to 569 1 to 566       566/566
(100 %)
0 diff
(100 %id)
BJ995347 hepatoblastoma .a 56 to 507 1 to 452       452/452
(100 %)
0 diff
(100 %id)
DA287336 corpus callosum .b 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
BX359516 Placenta Cot 25-normalized .b 314 to 1303 1 to 985 D46B D53X E69X R96X A111C ... tiling clone, fully sequenced,   985/985
(100 %)
33 diff
(96.7 %id)
BX351936 Placenta Cot 25-normalized .b 1273 to 2181 905 to 1   tiling clone, fully sequenced,   905/905
(100 %)
24 diff
(97.4 %id)
CD369588 Alveolar Macrophage, lung .b 1763 to 2184 440 to 19   tiling clone, AAA   422/422
(100 %)
0 diff
(100 %id)
DA027527   .c 1 to 232 2 to 233   tiling clone, capped   232/232
(100 %)
0 diff
(100 %id)
BI552637 brain, hippocampus .c 149 to 944 1 to 791       791/794
(99 %)
20 diff
(97.5 %id)
AF520698   .c 175 to 2340 1 to 2166 exact tiling clone,   2166/2166
(100 %)
0 diff
(100 %id)
NM_016479.3   .c 175 to 2340 1 to 2166 exact RefSeq,   2166/2166
(100 %)
0 diff
(100 %id)
DA450234 tongue, tumor tissue .c 221 to 778 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA878550 Prostate .c 222 to 741 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
DA955681 Spleen .c 223 to 782 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA384804 thalamus .c 225 to 823 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA341327 substantia nigra .c 226 to 785 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA615737   .c 226 to 794 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA707342   .c 226 to 789 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA707368   .c 226 to 781 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA849117 placenta .c 226 to 795 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA578552   .c 227 to 789 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DR005020 placenta .c 229 to 926 1 to 699       699/699
(100 %)
5 diff
(99.3 %id)
TI_57148387   .c 232 to 959 38 to 760       723/848
(85 %)
22 diff
(97.5 %id)
AL547336 placenta, Placenta Cot 25-normalized .c 238 to 1197 1 to 959 L14X L16*     959/959
(100 %)
6 diff
(99.4 %id)
BI759706 pooled colon, kidney, stomach .c 238 to 959 1 to 717       717/805
(89 %)
16 diff
(98.1 %id)
AK075441 placenta .c 239 to 2261 1 to 2023 exact     2023/2023
(100 %)
0 diff
(100 %id)
CN298039 embryonic stem cells, cell lines H1, H7, andH9 .c 240 to 925 1 to 685       685/685
(100 %)
2 diff
(99.8 %id)
DA591030 lung .c 240 to 672 2 to 434   capped   433/433
(100 %)
0 diff
(100 %id)
DA717008   .c 240 to 782 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA830145 placenta .c 240 to 952 2 to 720   capped   719/734
(97 %)
17 diff
(97.7 %id)
CR617624 Placenta Cot 25-normalized .c 241 to 2216 1 to 1976 exact     1976/1976
(100 %)
0 diff
(100 %id)
BX334404 Placenta Cot 25-normalized .c 241 to 1256 1 to 1006 I10S L11C L12C P13R L14C ... fully sequenced,   1006/1006
(100 %)
11 diff
(99.0 %id)
BI833964 pooled pancreas and spleen .c 241 to 1016 1 to 779       778/779
(99 %)
18 diff
(97.7 %id)
TI_57164437   .c 241 to 1016 65 to 843       778/843
(92 %)
24 diff
(97.2 %id)
DA372020 thalamus .c 242 to 759 2 to 519   capped   518/518
(100 %)
0 diff
(100 %id)
DA705326   .c 242 to 727 2 to 487   capped   486/486
(100 %)
0 diff
(100 %id)
DA029624   .c 244 to 827 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
DB001985 breast, tumor tissue .c 244 to 777 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
DA631606 Kidney .c 245 to 832 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA380161 thalamus .c 246 to 783 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BQ959287 leiomyosarcoma, uterus .c 246 to 1070 1 to 829 A219G Y228L N229H K237E A238G ...     829/888
(93 %)
13 diff
(98.6 %id)
CB152507 Liver .c 246 to 767 1 to 522       522/522
(100 %)
0 diff
(100 %id)
DA680789 ovary .c 246 to 790 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA837928 placenta .c 246 to 759 2 to 515   capped   514/514
(100 %)
0 diff
(100 %id)
BM838081 Ascites, stomach .c 246 to 904 1 to 659       659/659
(100 %)
0 diff
(100 %id)
DA922913 small intestine .c 246 to 790 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA009534 adrenal gland .c 247 to 496 2 to 251   capped   250/250
(100 %)
0 diff
(100 %id)
DA028735   .c 247 to 813 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA045806 bladder .c 247 to 737 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA050562   .c 247 to 665 2 to 420   capped   419/419
(100 %)
0 diff
(100 %id)
DA261324 caudate nucleus .c 247 to 759 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DA377252 thalamus .c 247 to 818 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA567550   .c 247 to 788 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA579930   .c 247 to 741 2 to 496   capped   495/495
(100 %)
0 diff
(100 %id)
DA584013 lung .c 247 to 850 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA585193 lung .c 247 to 794 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA588297 lung .c 247 to 830 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA590589 lung .c 247 to 737 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA595923   .c 247 to 955 2 to 706   capped   705/716
(98 %)
14 diff
(98.1 %id)
CX869515 embryonic stem .c 247 to 948 1 to 702       702/702
(100 %)
0 diff
(100 %id)
DA626247 Kidney .c 247 to 785 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
DA672474   .c 247 to 823 2 to 579   capped   578/578
(100 %)
4 diff
(99.4 %id)
DA672866   .c 247 to 833 2 to 589   capped   588/588
(100 %)
4 diff
(99.4 %id)
DA675726   .c 247 to 794 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA699499   .c 247 to 668 2 to 423   capped   422/422
(100 %)
0 diff
(100 %id)
DA746140   .c 247 to 806 2 to 562   capped   561/561
(100 %)
4 diff
(99.3 %id)
DA746594   .c 247 to 806 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA829724 placenta .c 247 to 908 2 to 671   capped   670/671
(99 %)
15 diff
(97.8 %id)
DA836951 placenta .c 247 to 794 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA844045 placenta .c 247 to 804 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA878520 Prostate .c 247 to 737 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DA879364 Prostate .c 247 to 814 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA913613   .c 247 to 818 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA988599 synovial membrane tissue from rheumatioidarthritis .c 247 to 737 2 to 492   capped   491/491
(100 %)
0 diff
(100 %id)
DB015656 esophageal, tumor tissue .c 247 to 759 2 to 514   capped   513/513
(100 %)
0 diff
(100 %id)
DB113431 thymus .c 247 to 835 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB475157 hippocampus .c 248 to 719 1 to 472       472/472
(100 %)
0 diff
(100 %id)
DA840984 placenta .c 248 to 814 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BP196996 adrenal gland .c 249 to 829 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BX359422 Placenta Cot 25-normalized .c 249 to 1168 1 to 905 I10S L11C L12C P13R L14C ...     905/975
(92 %)
21 diff
(97.9 %id)
BU528077 epidermoid carcinoma, cell line, lung .c 249 to 1047 23 to 834 Q194A Y195L P197T P198T Y199L ...     807/998
(80 %)
30 diff
(97.0 %id)
DA041489 bladder .c 250 to 814 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA645665 mammary gland .c 250 to 956 2 to 713   capped   712/768
(92 %)
13 diff
(98.4 %id)
DA848745 placenta .c 250 to 814 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB101209 thymus .c 250 to 665 2 to 418   capped   417/417
(100 %)
1 diff
(99.8 %id)
CR601224 placenta .c 251 to 2240 1 to 1990 exact     1990/1990
(100 %)
0 diff
(100 %id)
AL542718 placenta .c 251 to 1235 1 to 976 L114* fully sequenced,   976/976
(100 %)
13 diff
(98.7 %id)
DB476716 hippocampus .c 255 to 744 1 to 490       490/490
(100 %)
0 diff
(100 %id)
DA915655   .c 256 to 642 2 to 388   capped   387/387
(100 %)
0 diff
(100 %id)
BX337296 Placenta Cot 25-normalized .c 258 to 1294 1 to 1033 A238R A239P L240S     1033/1033
(100 %)
10 diff
(99.1 %id)
CR619483 Placenta Cot 25-normalized .c 259 to 2221 1 to 1963 exact     1963/1963
(100 %)
0 diff
(100 %id)
BX397117 Placenta Cot 25-normalized .c 259 to 1252 1 to 980 P160X Q175K H178T T179H M180H ...     980/1026
(95 %)
21 diff
(98.0 %id)
BX387801 Placenta Cot 25-normalized .c 259 to 1187 1 to 922 I10X L11P L12V P13A L14V ...     922/922
(100 %)
13 diff
(98.6 %id)
BM449850 melanotic melanoma, skin .c 259 to 1047 1 to 798 P197T P198T Y199L A201S Q202P ...     798/939
(84 %)
16 diff
(98.3 %id)
BU508967 leiomyosarcoma, uterus .c 259 to 952 1 to 698       698/922
(75 %)
10 diff
(99.0 %id)
CX755974 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 259 to 953 20 to 713     Submitted on the opposite strand 694/758
(91 %)
17 diff
(97.8 %id)
CR595213 Neuroblastoma Cot 25-normalized .c 261 to 2225 1 to 1965 exact     1965/1965
(100 %)
0 diff
(100 %id)
AL523734 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 261 to 1343 1 to 1067 L14X L18X G28X D53H E69Z ... fully sequenced,   1067/1067
(100 %)
27 diff
(97.5 %id)
BM834334 stomach .c 263 to 912 1 to 650       650/650
(100 %)
4 diff
(99.4 %id)
DA161372 amygdala .c 264 to 794 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA378676 thalamus .c 264 to 835 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA667310 esophagus .c 264 to 813 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA689493   .c 264 to 826 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA842229 placenta .c 264 to 823 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA845990 placenta .c 264 to 828 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA875040 Prostate .c 264 to 835 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA878611 Prostate .c 264 to 806 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA975434 synovial membrane tissue from rheumatioidarthritis .c 264 to 823 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB013625 esophageal, tumor tissue .c 264 to 691 2 to 429   capped   428/428
(100 %)
0 diff
(100 %id)
DB196943 trachea .c 264 to 794 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA849824 placenta .c 265 to 825 2 to 562   capped   561/562
(99 %)
1 diff
(99.9 %id)
BX336842 Placenta Cot 25-normalized .c 271 to 1096 1 to 827 A238R A239P     827/827
(100 %)
3 diff
(99.7 %id)
DA047152   .c 276 to 1074 2 to 796 P4X V112X S151X G176X P182S ... capped   795/795
(100 %)
14 diff
(98.3 %id)
DA424104   .c 276 to 849 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA677462   .c 276 to 849 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA838332 placenta .c 276 to 840 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DA973460 synovial membrane tissue from rheumatioidarthritis .c 276 to 759 2 to 485   capped   484/484
(100 %)
0 diff
(100 %id)
DA670675   .c 280 to 851 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA844400 placenta .c 280 to 839 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB004956 breast, tumor tissue .c 280 to 826 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB201392 trachea .c 280 to 864 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BP198483 adrenal gland .c 281 to 862 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP267564 thyroid .c 281 to 858 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP267900 thyroid .c 281 to 859 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
DA278317 corpus callosum .c 282 to 841 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA914890   .c 282 to 851 2 to 571   capped   570/571
(99 %)
2 diff
(99.7 %id)
DA930977 small intestine .c 282 to 853 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA938001 Spleen .c 282 to 873 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA050883   .c 284 to 856 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA376092 thalamus .c 292 to 849 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
TI_57239407   .c 292 to 1075 27 to 815 P182T A188S A189S P190T Y191T ...     789/815
(96 %)
37 diff
(95.5 %id)
CR604587 Neuroblastoma Cot 25-normalized .c 294 to 2232 1 to 1939 exact     1939/1939
(100 %)
0 diff
(100 %id)
BX376434 Neuroblastoma Cot 25-normalized .c 294 to 1233 1 to 928 I10X A238R A239P L240S fully sequenced,   928/928
(100 %)
7 diff
(99.3 %id)
BX338605 Placenta Cot 25-normalized .c 298 to 1353 1 to 1049 S68X E70X A238R A239P L240S     1049/1093
(95 %)
11 diff
(99.0 %id)
BX344148 Placenta Cot 25-normalized .c 298 to 1209 1 to 906 A238R A239P L240S     906/906
(100 %)
6 diff
(99.4 %id)
DA598509   .c 299 to 866 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BU538431 adenocarcinoma, cell line, breast .c 302 to 1026 1 to 729       729/1020
(71 %)
5 diff
(99.6 %id)
BU539543 adenocarcinoma, cell line, breast .c 302 to 1129 1 to 832 A231G     832/884
(94 %)
16 diff
(98.2 %id)
BU857141 adenocarcinoma, cell line, breast .c 302 to 1127 1 to 835 L213P A214G G215W G216R A217S ...     835/919
(90 %)
16 diff
(98.3 %id)
DA912351   .c 304 to 870 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
CR615636 Placenta Cot 25-normalized .c 307 to 2231 1 to 1925 exact     1925/1925
(100 %)
0 diff
(100 %id)
BX334804 Placenta Cot 25-normalized .c 307 to 1232 1 to 920 A238R A239P L240S fully sequenced,   920/920
(100 %)
2 diff
(99.8 %id)
CR623835 Placenta Cot 25-normalized .c 310 to 2233 1 to 1924       1924/1924
(100 %)
0 diff
(100 %id)
BX360390 Placenta Cot 25-normalized .c 310 to 1225 1 to 908   fully sequenced,   908/908
(100 %)
7 diff
(99.3 %id)
DA597100   .c 310 to 759 2 to 451   capped   450/450
(100 %)
0 diff
(100 %id)
DA662321   .c 310 to 856 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA376777 thalamus .c 311 to 859 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AL531033 brain, fetal liver, Liver, neuroblastoma cells .c 311 to 1303 1 to 980       980/986
(99 %)
24 diff
(97.6 %id)
BP342538 stomach mucosa .c 311 to 891 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DB260234 uterus .c 312 to 874 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BP253846 Kidney .c 357 to 938 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BM709005 eye, RPE and Choroid .c 1171 to 1327 1 to 157       157/157
(100 %)
0 diff
(100 %id)
BX338604 Placenta Cot 25-normalized .c 1175 to 2198 1007 to 1       1007/1008
(99 %)
32 diff
(96.9 %id)
BX344124 Placenta Cot 25-normalized .c 1181 to 2225 1027 to 1       1027/1027
(100 %)
15 diff
(98.6 %id)
AL518188 brain, neuroblastoma, neuroblastoma cells .c 1185 to 2243 1045 to 1       1045/1102
(94 %)
29 diff
(97.4 %id)
BX404615 neuroblastoma .c 1190 to 2209 1000 to 1       1000/1015
(98 %)
35 diff
(96.6 %id)
BX360389 Placenta Cot 25-normalized .c 1195 to 2231 1016 to 1   fully sequenced,   1016/1016
(100 %)
21 diff
(98.0 %id)
BX334803 Placenta Cot 25-normalized .c 1202 to 2228 1026 to 3   fully sequenced,   1024/1026
(99 %)
12 diff
(98.9 %id)
BX354993 Neuroblastoma Cot 25-normalized .c 1203 to 2208 1029 to 26   fully sequenced,   1004/1029
(97 %)
7 diff
(99.4 %id)
AL542717 placenta .c 1205 to 2240 1026 to 1   fully sequenced,   1026/1026
(100 %)
22 diff
(97.9 %id)
BM550370 melanotic melanoma, skin .c 1211 to 2170 1 to 971       971/1112
(87 %)
29 diff
(97.4 %id)
BX404616 neuroblastoma .c 1222 to 2246 1021 to 1       1021/1021
(100 %)
9 diff
(99.2 %id)
BX334403 Placenta Cot 25-normalized .c 1226 to 2216 980 to 1   fully sequenced,   980/980
(100 %)
19 diff
(98.1 %id)
BX359421 Placenta Cot 25-normalized .c 1230 to 2233 990 to 1       990/995
(99 %)
16 diff
(98.4 %id)
AL572310 placenta, Placenta Cot 25-normalized .c 1233 to 2221 987 to 8       980/987
(99 %)
37 diff
(96.3 %id)
BM710896 eye, fetal eyes .c 1247 to 1685 1 to 439   fully sequenced,   439/439
(100 %)
0 diff
(100 %id)
BX387800 Placenta Cot 25-normalized .c 1248 to 2200 959 to 3       957/959
(99 %)
0 diff
(100 %id)
BX344147 Placenta Cot 25-normalized .c 1266 to 2250 978 to 1       978/978
(100 %)
18 diff
(98.2 %id)
BX397116 Placenta Cot 25-normalized .c 1303 to 2217 912 to 1       912/917
(99 %)
33 diff
(96.5 %id)
BM927484 lymph, lymphoma, cell line .c 1310 to 2262 995 to 31     Submitted on the opposite strand 965/1044
(92 %)
0 diff
(100 %id)
TI_227714190   .c 1312 to 2261 1058 to 121   AAA   938/970
(96 %)
31 diff
(96.9 %id)
AL562252 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 1313 to 2210 913 to 16   fully sequenced,   898/913
(98 %)
25 diff
(97.3 %id)
BX380933 Placenta Cot 25-normalized .c 1313 to 2220 900 to 1       900/900
(100 %)
38 diff
(95.8 %id)
AL531032 brain, fetal liver, Liver, neuroblastoma cells .c 1339 to 2204 860 to 1       860/860
(100 %)
27 diff
(96.9 %id)
TI_227714437   .c 1343 to 2261 990 to 89   AAA   902/984
(91 %)
15 diff
(98.5 %id)
BX336841 Placenta Cot 25-normalized .c 1349 to 2232 883 to 1       883/885
(99 %)
1 diff
(99.9 %id)
BM564520 duodenal adenocarcinoma, cell line, small intestine .c 1377 to 2216 1 to 845       845/1081
(78 %)
14 diff
(98.8 %id)
BM561366 duodenal adenocarcinoma, cell line, small intestine .c 1380 to 2261 1 to 892   AAA   892/892
(100 %)
29 diff
(96.8 %id)
TI_59384843   .c 1391 to 2072 66 to 745       680/680
(100 %)
4 diff
(99.5 %id)
TI_154109422   .c 1410 to 2261 927 to 85   AAA   843/972
(86 %)
14 diff
(98.6 %id)
TI_154127596   .c 1429 to 2261 942 to 115   AAA   828/977
(84 %)
15 diff
(98.5 %id)
CN399609 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1454 to 2127 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
TI_159696262   .c 1471 to 2261 917 to 130   AAA   788/968
(81 %)
13 diff
(98.7 %id)
BU195681 leiomyosarcoma, uterus .c 1473 to 2217 1 to 747       747/804
(92 %)
8 diff
(99.1 %id)
TI_154123732   .c 1502 to 2261 864 to 117   AAA   748/916
(81 %)
26 diff
(97.2 %id)
BU625299 cell lines, Enchondroma .c 1513 to 2261 767 to 19   AAA   749/750
(99 %)
1 diff
(99.9 %id)
BM559610 amelanotic melanoma, cell line, skin .c 1524 to 2262 1 to 741       741/1133
(65 %)
8 diff
(99.3 %id)
BQ009237 Chondrosarcoma, Left Pubic Bone .c 1541 to 2260 738 to 19   AAA   720/720
(100 %)
1 diff
(99.9 %id)
BM685520 eye, RPE and Choroid .c 1543 to 2055 1 to 513   fully sequenced,   513/513
(100 %)
4 diff
(99.3 %id)
CX869440 embryonic stem .c 1554 to 2260 733 to 27   AAA   707/707
(100 %)
1 diff
(99.9 %id)
TI_154030065   .c 1554 to 2261 809 to 102   AAA   708/922
(76 %)
31 diff
(96.7 %id)
TI_154043847   .c 1580 to 2261 791 to 111   AAA   681/925
(73 %)
23 diff
(97.6 %id)
BU623471 cell lines, Enchondroma .c 1582 to 2261 698 to 19   AAA   680/680
(100 %)
0 diff
(100 %id)
BX337295 Placenta Cot 25-normalized .c 1587 to 2221 643 to 1       643/1185
(54 %)
15 diff
(98.8 %id)
BQ020603 Fibrosarcoma .c 1590 to 2261 690 to 19   AAA   672/672
(100 %)
0 diff
(100 %id)
CD365204 Alveolar Macrophage, lung .c 1590 to 2261 690 to 19   AAA   672/672
(100 %)
0 diff
(100 %id)
CD364907 Alveolar Macrophage, lung .c 1592 to 2261 688 to 19   AAA   670/670
(100 %)
0 diff
(100 %id)
BU730905 eye, RPE and Choroid .c 1594 to 2261 685 to 19   AAA   667/667
(100 %)
3 diff
(99.6 %id)
CA447885 Chondrosarcoma, Left Pelvis .c 1620 to 2261 660 to 19   AAA   642/642
(100 %)
0 diff
(100 %id)
BM665989 eye, fetal eyes .c 1655 to 2261 625 to 19   fully sequenced, AAA   607/607
(100 %)
0 diff
(100 %id)
BM998642 lung, Metastatic Chondrosarcoma .c 1663 to 2261 617 to 19   AAA   599/599
(100 %)
0 diff
(100 %id)
BQ436232 embryonal carcinoma, cell line, testis .c 1703 to 2261 1 to 559   AAA   559/559
(100 %)
0 diff
(100 %id)
DB295715   .c 1731 to 2261 531 to 1       531/533
(99 %)
0 diff
(100 %id)
DB342403 thymus .c 1758 to 2261 504 to 1       504/504
(100 %)
0 diff
(100 %id)
DB319719   .c 1806 to 2261 460 to 1       460/460
(100 %)
5 diff
(99.0 %id)
DB564197 hypothalamus .c 1809 to 2261 1 to 453     Submitted on the opposite strand 453/453
(100 %)
1 diff
(99.8 %id)
DB555689 hypothalamus .c 1823 to 2261 7 to 445     Submitted on the opposite strand 439/445
(98 %)
6 diff
(98.7 %id)
DB375182 placenta .c 1827 to 2261 435 to 1       435/446
(97 %)
1 diff
(99.8 %id)
AI718508 colon .c 1854 to 2306 453 to 1       453/453
(100 %)
0 diff
(100 %id)
BQ186648 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1891 to 2261 1 to 371   AAA   371/371
(100 %)
0 diff
(100 %id)
DB374645 placenta .c 1942 to 2261 320 to 2       319/320
(99 %)
0 diff
(100 %id)
BM663433 eye, RPE and Choroid .c 2025 to 2261 254 to 18   fully sequenced, AAA   237/237
(100 %)
0 diff
(100 %id)
CR623228 Placenta Cot 25-normalized .d 1 to 1943 1 to 1943 exact tiling clone,   1943/1943
(100 %)
0 diff
(100 %id)
BX379507 Placenta Cot 25-normalized .d 1 to 999 1 to 978 T142H T143H S144I T145H T146H ... fully sequenced,   978/978
(100 %)
13 diff
(98.7 %id)
CR617987 Placenta Cot 25-normalized .d 13 to 1945 1 to 1933 exact tiling clone,   1933/1933
(100 %)
0 diff
(100 %id)
BX340061 Placenta Cot 25-normalized .d 13 to 975 1 to 953 Y188X A231R A232P L233S fully sequenced,   953/953
(100 %)
9 diff
(99.1 %id)
BX340060 Placenta Cot 25-normalized .d 945 to 1945 993 to 1   fully sequenced,   993/993
(100 %)
23 diff
(97.7 %id)
BX358175 Placenta Cot 25-normalized .d 969 to 1943 958 to 1   fully sequenced,   958/958
(100 %)
16 diff
(98.4 %id)
DA045437 bladder .e 1 to 571 2 to 572   tiling clone, capped   571/571
(100 %)
0 diff
(100 %id)
DA657994   .e 14 to 579 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA025113   .e 20 to 597 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA146366 amygdala .e 32 to 609 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA296551 hippocampus .e 32 to 585 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA636235 Kidney .e 32 to 606 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA664762   .e 32 to 603 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
CR603894 Placenta Cot 25-normalized .e 38 to 2032 1 to 1995 exact tiling clone,   1995/1995
(100 %)
0 diff
(100 %id)
BX344125 Placenta Cot 25-normalized .e 38 to 1019 1 to 976 L83*     976/976
(100 %)
9 diff
(99.1 %id)
BX380934 Placenta Cot 25-normalized .e 38 to 1027 1 to 983 L83*     983/1073
(91 %)
30 diff
(97.3 %id)
BI917474 brain .e 43 to 657 1 to 618       618/618
(100 %)
6 diff
(99.1 %id)
TI_57244844   .e 43 to 657 33 to 650       618/650
(95 %)
9 diff
(98.7 %id)
DA341667 substantia nigra .e 51 to 550 2 to 502   capped   501/502
(99 %)
1 diff
(99.9 %id)
DA423074   .e 51 to 571 2 to 522   capped   521/521
(100 %)
0 diff
(100 %id)
DA872268 Prostate .e 51 to 591 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
BF940479 fibrotheoma, ovary .f 1 to 264 2 to 265   tiling clone, Submitted on the opposite strand 265/265
(100 %)
0 diff
(100 %id)
AK124652 amygdala .f 104 to 2409 1 to 2306 exact tiling clone, available from FLJ,   2306/2306
(100 %)
0 diff
(100 %id)
DA158054 amygdala .f 105 to 539 2 to 436   capped   435/435
(100 %)
0 diff
(100 %id)
DB302006 amygdala .f 2116 to 2409 294 to 1       294/294
(100 %)
0 diff
(100 %id)
AW269182 Kidney .g 1 to 353 1 to 354   tiling clone, Submitted on the opposite strand 354/354
(100 %)
3 diff
(99.2 %id)
DA020280   .g 142 to 683 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA052435   .g 148 to 685 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA445145 tongue, tumor tissue .g 149 to 718 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA672944   .g 149 to 730 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA707316   .g 149 to 719 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA839676 placenta .g 149 to 709 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA876246 Prostate .g 149 to 683 2 to 536   capped   535/535
(100 %)
1 diff
(99.9 %id)
DA678293   .g 151 to 660 2 to 511   capped   510/510
(100 %)
4 diff
(99.3 %id)
DA038948   .g 152 to 683 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA710243   .g 152 to 678 2 to 528   capped   527/527
(100 %)
1 diff
(99.9 %id)
DA911916   .g 154 to 711 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA266904 caudate nucleus .g 155 to 707 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
AK056328   .g 160 to 2409 1 to 2250 exact tiling clone, available from FLJ,   2250/2250
(100 %)
1 diff
(100.0 %id)
DA704530   .g 161 to 644 2 to 485   capped   484/484
(100 %)
1 diff
(99.8 %id)
DB016893 esophageal, tumor tissue .g 161 to 514 2 to 355   capped   354/354
(100 %)
1 diff
(99.8 %id)
BM924007 pooled colon, kidney, stomach .g 174 to 994 1 to 834       834/886
(94 %)
25 diff
(97.2 %id)
DA422412 cervix .g 180 to 526 2 to 348   capped   347/347
(100 %)
5 diff
(98.6 %id)
BP350272 brain .g 227 to 808 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BF338475 brain, glioblastoma with EGFR amplification .g 271 to 956 1 to 677       677/777
(87 %)
14 diff
(98.2 %id)
DA980657 synovial membrane tissue from rheumatioidarthritis .g 285 to 823 2 to 540   tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
BQ327957 kidney_tumor .g 339 to 854 523 to 1       523/523
(100 %)
7 diff
(98.7 %id)
CA454469   .g 566 to 1416 1 to 875       875/902
(97 %)
23 diff
(97.5 %id)
CB118910 Liver .g 597 to 1225 1 to 629       629/629
(100 %)
0 diff
(100 %id)
DB012539 esophageal, tumor tissue .g 597 to 1175 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
T08246   .g 612 to 942 1 to 331       331/331
(100 %)
0 diff
(100 %id)
CN483571 eye .g 673 to 1165 4 to 496       493/496
(99 %)
0 diff
(100 %id)
BM705194 eye, RPE and Choroid .g 688 to 1167 1 to 480       480/480
(100 %)
0 diff
(100 %id)
BM920145 pooled pancreas and spleen .g 719 to 1599 1 to 890       890/1082
(82 %)
11 diff
(99.0 %id)
TI_57237171   .g 748 to 1482 35 to 770       738/923
(79 %)
46 diff
(95.1 %id)
BM917076 blood, natural killer cells, cell line .g 770 to 1457 24 to 709       686/1253
(54 %)
11 diff
(99.2 %id)
TI_1948083470   .g 770 to 1182 132 to 544       413/797
(51 %)
10 diff
(98.8 %id)
CN399623 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .g 771 to 1468 5 to 700       700/709
(98 %)
3 diff
(99.6 %id)
CR615519 Placenta Cot 25-normalized .g 771 to 2380 1 to 1611       1611/1611
(100 %)
1 diff
(100.0 %id)
BQ937547 epidermoid carcinoma, cell line, lung .g 771 to 1655 3 to 897       897/904
(99 %)
25 diff
(97.3 %id)
BQ711444 Spleen .g 781 to 1471 1 to 691       691/994
(69 %)
10 diff
(99.0 %id)
BP297041   .g 808 to 1389 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU168153 epithelioid carcinoma, Pancreas .g 815 to 1606 1 to 808       808/908
(88 %)
22 diff
(97.6 %id)
BQ674018 epidermoid carcinoma, cell line, salivary gland .g 818 to 1699 1 to 885       885/906
(97 %)
8 diff
(99.2 %id)
BQ669718 epidermoid carcinoma, cell line, salivary gland .g 818 to 1468 1 to 649       649/657
(98 %)
4 diff
(99.4 %id)
BP265976 thyroid .g 823 to 1400 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP267530 thyroid .g 830 to 1409 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP267891 thyroid .g 830 to 1411 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CR996016 T-Lymphocytes .g 883 to 1547 1 to 665       665/665
(100 %)
2 diff
(99.7 %id)
BQ936787 carcinoma, cell line, Prostate .g 968 to 1963 1 to 997       997/1057
(94 %)
30 diff
(97.2 %id)
CN399622 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .g 986 to 1568 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BF033165 adenocarcinoma, ovary .g 996 to 1145 1 to 154       154/154
(100 %)
12 diff
(92.3 %id)
CR615082 Placenta Cot 25-normalized .g 1019 to 2375 1 to 1357       1357/1357
(100 %)
0 diff
(100 %id)
BX357476 Placenta Cot 25-normalized .g 1019 to 1511 1 to 481   fully sequenced,   481/481
(100 %)
0 diff
(100 %id)
BE882551 leiomyosarcoma, uterus .g 1059 to 1145 1 to 87       87/87
(100 %)
0 diff
(100 %id)
CR598876 Neuroblastoma Cot 10-normalized .g 1069 to 2394 1 to 1326       1326/1326
(100 %)
0 diff
(100 %id)
BE783554 eye, retinoblastoma .g 1073 to 1145 1 to 73       73/73
(100 %)
0 diff
(100 %id)
CX871209 embryonic stem .g 1088 to 1882 1 to 795       795/795
(100 %)
0 diff
(100 %id)
CR626100 Placenta Cot 25-normalized .g 1100 to 2359 1 to 1261       1261/1261
(100 %)
1 diff
(100.0 %id)
BQ434718 melanotic melanoma, skin .g 1131 to 1975 1 to 856       856/856
(100 %)
14 diff
(98.4 %id)
BU539863 adenocarcinoma, cell line, breast .g 1147 to 1980 1 to 841       841/884
(95 %)
10 diff
(98.9 %id)
BU554184 ovary, teratocarcinoma, cell line .g 1157 to 2045 1 to 890       890/891
(99 %)
5 diff
(99.5 %id)
BU859323 ovary, teratocarcinoma, cell line .g 1157 to 1881 1 to 728       728/933
(78 %)
4 diff
(99.6 %id)
BM718463 eye, fetal eye .g 1210 to 1746 1 to 537   fully sequenced,   537/537
(100 %)
0 diff
(100 %id)
CF146474 CNCAP(3)T-225 cell line, Prostate .g 1226 to 1882 7 to 663       657/663
(99 %)
6 diff
(99.1 %id)
TI_154178928   .g 1226 to 1990 76 to 836       761/926
(82 %)
19 diff
(98.0 %id)
BM561400 blood, natural killer cells, cell line .g 1228 to 2067 1 to 848       848/1037
(81 %)
17 diff
(98.4 %id)
TI_57182965   .g 1228 to 1991 57 to 815       759/817
(92 %)
7 diff
(99.2 %id)
BQ653160 hepatocellular carcinoma, cell line, Liver .g 1244 to 2105 1 to 866       866/950
(91 %)
16 diff
(98.4 %id)
DR422286 eye, Pterygium .g 1251 to 1936 1 to 686       686/686
(100 %)
0 diff
(100 %id)
FN082746 breast carcinoma .g 1308 to 1381 1 to 73       73/74
(98 %)
4 diff
(94.6 %id)
BF032209 adenocarcinoma, ovary .g 1370 to 2087 1 to 717       717/719
(99 %)
7 diff
(99.1 %id)
BX357475 Placenta Cot 25-normalized .g 1481 to 2375 884 to 1   fully sequenced,   884/884
(100 %)
9 diff
(99.0 %id)
BM683508 eye, fetal eye .g 1738 to 2409 691 to 19   fully sequenced, AAA   673/673
(100 %)
1 diff
(99.9 %id)
DB355245 whole embryo, mainly head .g 1844 to 2409 563 to 1       563/563
(100 %)
12 diff
(97.9 %id)
DB323908   .g 1874 to 2409 536 to 1       536/536
(100 %)
0 diff
(100 %id)
BM992584 lung, Metastatic Chondrosarcoma .g 1883 to 2409 545 to 19   AAA   527/527
(100 %)
0 diff
(100 %id)
DB545435 hippocampus .g 1890 to 2409 1 to 520     Submitted on the opposite strand 520/520
(100 %)
0 diff
(100 %id)
BQ018920 lung, Metastatic Chondrosarcoma .g 1890 to 2409 538 to 19   AAA   520/520
(100 %)
0 diff
(100 %id)
DB357386 whole embryo, mainly head .g 1902 to 2409 509 to 1       509/509
(100 %)
12 diff
(97.7 %id)
EC502114 Prostate .g 1919 to 1992 22 to 94       73/94
(77 %)
1 diff
(99.0 %id)
AI066498 pooled germ cell tumors .g 1924 to 2409 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AA293739 ovarian tumor, ovary .g 1928 to 2199 1 to 271   fully sequenced,   271/271
(100 %)
0 diff
(100 %id)
DB543985 hippocampus .g 1933 to 2409 1 to 477     Submitted on the opposite strand 477/477
(100 %)
1 diff
(99.8 %id)
DB573540 hypothalamus .g 1939 to 2408 1 to 470     Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
TI_151730466   .g 2061 to 2409 437 to 89   AAA   349/949
(36 %)
3 diff
(99.7 %id)
BQ186424 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 2068 to 2409 1 to 342   AAA   342/342
(100 %)
0 diff
(100 %id)
AW793281 uterus .g 2078 to 2208 133 to 5       129/153
(84 %)
0 diff
(100 %id)
BM931724 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g 2102 to 2408 1 to 307   AAA   307/307
(100 %)
0 diff
(100 %id)
EC584937 Prostate .g 2110 to 2201 10 to 101       92/101
(91 %)
6 diff
(94.1 %id)
AA293125 ovarian tumor, ovary .g 2169 to 2409 261 to 21   fully sequenced, AAA   241/241
(100 %)
1 diff
(99.6 %id)
AI962133 normal epithelium, ovary .g 2189 to 2409 244 to 24   AAA   221/221
(100 %)
9 diff
(96.0 %id)
AI570088 adenocarcinoma, Pancreas .g 2204 to 2409 239 to 34   AAA   206/206
(100 %)
9 diff
(95.7 %id)
AI984204 four pooled poorly-differentiatedadenocarcinomas, lung .g 2240 to 2409 191 to 22   AAA   170/170
(100 %)
7 diff
(95.9 %id)
DA041508 bladder .h 1 to 474 2 to 475   capped   474/474
(100 %)
0 diff
(100 %id)
DA717944   .h 1 to 529 2 to 530   tiling clone, capped   529/529
(100 %)
0 diff
(100 %id)
DB116711 thymus .h 22 to 565 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA942938 Spleen .h 32 to 620 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA365269 subthalamic nucleus .h 33 to 605 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB251601 uterus .h 33 to 530 2 to 499   capped   498/503
(99 %)
1 diff
(99.9 %id)
BX461523 brain, fetal brain .h 59 to 1036 1 to 964 H17X P26X S28X T40N L42I ...     964/969
(99 %)
55 diff
(94.4 %id)
DB125908 thymus .h 62 to 621 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA176527 amygdala .h 71 to 632 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
BP262765 small intestine .h 75 to 655 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP262822 small intestine .h 75 to 658 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
CR612747 B cells (Ramos cell line) Cot 25-normalized .h 79 to 1907 1 to 1829 exact tiling clone,   1829/1829
(100 %)
0 diff
(100 %id)
BX401546   .h 79 to 952 2 to 873 P46X G106A G107A P108L L109* fully sequenced,   872/873
(99 %)
7 diff
(99.2 %id)
BX401545   .h 922 to 1907 976 to 1   fully sequenced,   976/976
(100 %)
9 diff
(99.1 %id)
BX455528 brain, fetal brain .h 1045 to 1938 894 to 1   tiling clone,   894/894
(100 %)
23 diff
(97.5 %id)
AK301191 Spleen .i 1 to 917 1 to 917 exact tiling clone,   917/917
(100 %)
0 diff
(100 %id)
DC390773 Spleen .i 1 to 564 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC389572 Spleen .i 22 to 608 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DC391009 Spleen .i 39 to 602 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DC295658 synovial membrane tissue from rheumatioidarthritis .i 39 to 613 1 to 575       575/575
(100 %)
0 diff
(100 %id)
DC391888 Spleen .i 65 to 561 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
DC389571 Spleen .i 295 to 806 1 to 512       512/512
(100 %)
0 diff
(100 %id)
DA839629 placenta .j 1 to 554 2 to 555   tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
DA575357   .j 18 to 585 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA010444 adrenal gland .k 1 to 556 2 to 557 exact tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA683601   .l 1 to 518 2 to 519   tiling clone, capped   518/518
(100 %)
0 diff
(100 %id)
BG479261 choriocarcinoma, placenta .l 17 to 618 1 to 597 C27W C29W C30W C31W Y33* tiling clone,   596/597
(99 %)
35 diff
(94.2 %id)
CR604885 Placenta Cot 25-normalized .m 1 to 1612 3 to 1614 exact tiling clone,   1614/1614
(100 %)
0 diff
(100 %id)
BX340362 Placenta Cot 25-normalized .m 1 to 806 3 to 790 C29X Y56X A135R A136P L137S fully sequenced,   790/790
(100 %)
4 diff
(99.5 %id)
BX340361 Placenta Cot 25-normalized .m 776 to 1591 821 to 22   fully sequenced,   800/821
(97 %)
7 diff
(99.2 %id)
AF151051 umbilical cord blood .n 1 to 1729 7 to 1731 L11* tiling clone, AAA   1731/1731
(100 %)
14 diff
(99.2 %id)
DB004748 breast, tumor tissue .n 10 to 694 2 to 686 exact tiling clone, capped   685/685
(100 %)
0 diff
(100 %id)
W93797 heart .n 460 to 894 1 to 441   tiling clone,   441/444
(99 %)
11 diff
(97.6 %id)
W93985 heart .n 1235 to 1730 496 to 1       496/496
(100 %)
7 diff
(98.6 %id)
DA139517 alzheimer cortex .o 1 to 628 2 to 629   tiling clone, capped   628/628
(100 %)
1 diff
(99.9 %id)
CR603133 Neuroblastoma Cot 25-normalized .o 123 to 1908 1 to 1786 exact tiling clone,   1786/1786
(100 %)
0 diff
(100 %id)
TI_44168720   .o 138 to 913 84 to 858 M83C P84Q A85Q A86H Y88T ...     775/860
(90 %)
19 diff
(97.8 %id)
DA169604 amygdala .o 141 to 726 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
BQ920190 carcinoma, cell line, Prostate .o 141 to 1019 1 to 879 exact     879/953
(92 %)
10 diff
(99.0 %id)
BU541150 carcinoma, cell line, Prostate .o 141 to 973 1 to 847 exact     847/910
(93 %)
15 diff
(98.4 %id)
BU541259 carcinoma, cell line, Prostate .o 141 to 1007 1 to 878 exact     878/905
(97 %)
14 diff
(98.5 %id)
DB030742 testis .o 141 to 735 2 to 596 exact capped   595/595
(100 %)
0 diff
(100 %id)
TI_57240542   .o 145 to 994 29 to 881 L137S     853/890
(95 %)
18 diff
(98.0 %id)
DC352724 brain .o 169 to 609 1 to 441       441/441
(100 %)
0 diff
(100 %id)
DC301671   .o 171 to 548 1 to 378       378/378
(100 %)
1 diff
(99.8 %id)
DC339967 thalamus .o 173 to 594 1 to 424       424/424
(100 %)
3 diff
(99.3 %id)
BP256081 Kidney .o 173 to 753 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
TI_45211298   .o 173 to 965 128 to 919 G73A Y74T H75T T76P M77C ...     792/922
(85 %)
25 diff
(97.3 %id)
CB134985 Liver .o 173 to 791 1 to 619 exact     619/619
(100 %)
0 diff
(100 %id)
DC365752   .o 173 to 612 1 to 439       439/439
(100 %)
3 diff
(99.4 %id)
DA728383   .o 173 to 928 2 to 758 exact capped   757/757
(100 %)
2 diff
(99.8 %id)
DC419199 stomach, tumor tissue .o 173 to 531 1 to 359       359/359
(100 %)
0 diff
(100 %id)
BP373102 umbilical cord .o 173 to 754 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
BP375256 umbilical cord .o 173 to 753 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
DA007290   .o 174 to 753 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA272111 caudate nucleus .o 174 to 813 2 to 641 exact capped   640/640
(100 %)
0 diff
(100 %id)
DA472103   .o 174 to 1022 2 to 860 K134X capped   859/867
(99 %)
29 diff
(96.7 %id)
DA529363 brain .o 174 to 779 2 to 607 exact capped   606/606
(100 %)
0 diff
(100 %id)
DA536976 heart .o 174 to 756 2 to 584 exact capped   583/583
(100 %)
0 diff
(100 %id)
DA541025 lung .o 174 to 757 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DA541196 lung .o 174 to 763 2 to 591 exact capped   590/590
(100 %)
0 diff
(100 %id)
DA664382   .o 174 to 926 2 to 753 exact capped   752/752
(100 %)
1 diff
(99.9 %id)
DA671286   .o 174 to 767 2 to 595 exact capped   594/594
(100 %)
0 diff
(100 %id)
DA675311   .o 174 to 769 2 to 597 exact capped   596/596
(100 %)
0 diff
(100 %id)
DA729373   .o 174 to 923 2 to 753 exact capped   752/752
(100 %)
2 diff
(99.8 %id)
DA909591   .o 174 to 752 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA913549   .o 174 to 753 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA913556   .o 174 to 757 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DB010810 colon, tumor tissue .o 174 to 758 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
DB107102 thymus .o 174 to 752 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DB186106 liver, tumor tissue .o 174 to 752 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DB166530 thyroid gland .o 176 to 938 2 to 763 exact capped   762/764
(99 %)
8 diff
(99.0 %id)
BU554124 ovary, teratocarcinoma, cell line .o 185 to 949 1 to 776 exact     776/947
(81 %)
16 diff
(98.4 %id)
BU557089 ovary, teratocarcinoma, cell line .o 185 to 1019 1 to 831 exact     831/968
(85 %)
10 diff
(99.0 %id)
TI_57149634   .o 188 to 1014 66 to 893 Y118*     828/902
(91 %)
26 diff
(97.2 %id)
TI_57151593   .o 190 to 1047 23 to 879 G73A Y74T H75T T76P M77C ...     857/879
(97 %)
24 diff
(97.3 %id)
AL832568 brain .o 191 to 1960 1 to 1770 exact available from DKFZ, AAA   1770/1770
(100 %)
0 diff
(100 %id)
BU160444 melanotic melanoma, skin .o 191 to 1019 1 to 828 exact     828/884
(93 %)
4 diff
(99.6 %id)
BM478117 lymph, lymphoma, cell line .o 192 to 1139 1 to 965 exact     965/980
(98 %)
30 diff
(97.0 %id)
DB191312 lung, tumor tissue .o 192 to 779 2 to 589 exact capped   588/588
(100 %)
0 diff
(100 %id)
BQ227977 epithelioid carcinoma, Pancreas .o 193 to 1016 1 to 828 exact     828/867
(95 %)
9 diff
(99.0 %id)
CR593606 HeLa cells Cot 25-normalized .o 194 to 1910 1 to 1717 exact     1717/1717
(100 %)
0 diff
(100 %id)
DA078607 cerebellum .o 195 to 773 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DB486662 hypothalamus .o 195 to 607 1 to 412       412/412
(100 %)
3 diff
(99.3 %id)
TI_57241322   .o 195 to 1016 35 to 855 A128G A136D     821/857
(95 %)
21 diff
(97.6 %id)
TI_57220815   .o 197 to 1093 64 to 970 exact     907/970
(93 %)
37 diff
(96.2 %id)
CN399598 embryonic stem cells, DMSO-treated H9 cellline .o 201 to 863 8 to 672 exact     665/672
(98 %)
8 diff
(98.9 %id)
DA670635   .o 202 to 797 2 to 597 exact capped   596/596
(100 %)
0 diff
(100 %id)
DA139535 alzheimer cortex .o 204 to 835 2 to 633 exact capped   632/632
(100 %)
0 diff
(100 %id)
DA538159 Kidney .o 204 to 793 2 to 591 exact capped   590/590
(100 %)
0 diff
(100 %id)
BJ995120 hepatoblastoma .o 204 to 784 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
DA620814   .o 204 to 786 2 to 584 exact capped   583/583
(100 %)
0 diff
(100 %id)
DB032797 testis .o 204 to 791 2 to 589 exact capped   588/588
(100 %)
0 diff
(100 %id)
DB502330 hypothalamus .o 205 to 660 1 to 456       456/456
(100 %)
0 diff
(100 %id)
DA675898   .o 205 to 786 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA847019 placenta .o 205 to 789 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
DA542090 lung .o 206 to 791 2 to 587 exact capped   586/586
(100 %)
0 diff
(100 %id)
DA728550   .o 209 to 1019 2 to 818 exact capped   817/893
(91 %)
12 diff
(98.7 %id)
DB031394 testis .o 210 to 823 2 to 615 exact capped   614/614
(100 %)
0 diff
(100 %id)
TI_57232927   .o 213 to 938 28 to 753 exact     726/753
(96 %)
6 diff
(99.3 %id)
DB112118 thymus .o 215 to 805 2 to 592 exact capped   591/591
(100 %)
0 diff
(100 %id)
CR595692 neuroblastoma .o 216 to 1344 1 to 1129 exact     1129/1129
(100 %)
0 diff
(100 %id)
AL518189 brain, neuroblastoma, neuroblastoma cells .o 216 to 1294 1 to 1059 A135R A136P L137S     1059/1102
(96 %)
26 diff
(97.7 %id)
BX404617 neuroblastoma .o 216 to 1216 1 to 988 A135R A136P L137S     988/988
(100 %)
17 diff
(98.3 %id)
BX404618 neuroblastoma .o 216 to 1162 1 to 934 A135R A136P L137S     934/934
(100 %)
15 diff
(98.4 %id)
TI_57220830   .o 219 to 1090 69 to 945 exact     877/946
(92 %)
26 diff
(97.3 %id)
TI_59387142   .o 220 to 1029 62 to 871 L137S     810/813
(99 %)
8 diff
(99.1 %id)
CR593445 fetal brain .o 223 to 1939 1 to 1717 exact     1717/1717
(100 %)
0 diff
(100 %id)
CR620899 Placenta Cot 25-normalized .o 223 to 1943 1 to 1721 exact     1721/1721
(100 %)
0 diff
(100 %id)
TI_44172066   .o 224 to 1051 129 to 968 L137S     840/968
(86 %)
33 diff
(96.6 %id)
DB294434   .o 224 to 979 2 to 762 exact capped   761/761
(100 %)
9 diff
(98.9 %id)
BQ943689 large cell carcinoma, lung .o 225 to 1127 1 to 903 exact     903/906
(99 %)
7 diff
(99.3 %id)
BU849964 ovary, teratocarcinoma, cell line .o 225 to 1137 1 to 925 exact     925/925
(100 %)
3 diff
(99.7 %id)
DA675004   .o 226 to 806 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
BQ927328 large cell carcinoma, lung .o 228 to 1080 1 to 860 exact     860/939
(91 %)
17 diff
(98.2 %id)
BQ928731 epidermoid carcinoma, cell line, lung .o 228 to 1141 16 to 942 exact     927/1007
(92 %)
30 diff
(97.1 %id)
TI_57238447   .o 228 to 1095 24 to 892 exact     869/897
(96 %)
15 diff
(98.4 %id)
TI_57238793   .o 228 to 1006 96 to 875 K134N A135G A136G L137P     780/875
(89 %)
8 diff
(99.1 %id)
CR591364 Placenta Cot 25-normalized .o 229 to 1928 1 to 1700 exact     1700/1700
(100 %)
0 diff
(100 %id)
CR596821 fetal liver .o 229 to 1857 1 to 1629 exact     1629/1629
(100 %)
0 diff
(100 %id)
CR599906 neuroblastoma .o 229 to 1936 1 to 1708 exact     1708/1708
(100 %)
0 diff
(100 %id)
CR604935 Neuroblastoma Cot 25-normalized .o 229 to 1928 1 to 1700 exact     1700/1700
(100 %)
0 diff
(100 %id)
CR605105 fetal brain .o 229 to 1933 1 to 1705 exact     1705/1705
(100 %)
0 diff
(100 %id)
CR614701 Placenta Cot 25-normalized .o 229 to 1929 1 to 1701 exact     1701/1701
(100 %)
0 diff
(100 %id)
CR619118 HeLa cells Cot 25-normalized .o 229 to 1905 1 to 1677 exact     1677/1677
(100 %)
0 diff
(100 %id)
CR620430 Placenta Cot 25-normalized .o 229 to 1926 1 to 1698 exact     1698/1698
(100 %)
0 diff
(100 %id)
CR623003 Neuroblastoma Cot 25-normalized .o 229 to 1932 1 to 1704 exact     1704/1704
(100 %)
0 diff
(100 %id)
TI_57219010   .o 229 to 1052 22 to 845 Y66V G68W P69T S70K Y71L ...     824/845
(97 %)
13 diff
(98.5 %id)
TI_57146124   .o 229 to 1051 65 to 894 exact     830/894
(92 %)
18 diff
(98.0 %id)
TI_57179008   .o 229 to 1008 28 to 807 exact     780/807
(96 %)
8 diff
(99.1 %id)
TI_57201202   .o 230 to 915 30 to 716 exact     687/717
(95 %)
8 diff
(98.9 %id)
BP373320 umbilical cord .o 231 to 811 1 to 581 exact     581/581
(100 %)
0 diff
(100 %id)
BP194851 brain .o 232 to 814 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
CR590175 adult brain .o 233 to 1930 1 to 1698 exact     1698/1698
(100 %)
0 diff
(100 %id)
CR590280 placenta .o 233 to 1957 1 to 1725 exact     1725/1725
(100 %)
0 diff
(100 %id)
CR592234 Placenta Cot 25-normalized .o 233 to 1929 1 to 1697 exact     1697/1697
(100 %)
0 diff
(100 %id)
CR596221 T cells (Jurkat cell line) Cot10-normalized .o 233 to 1930 1 to 1698 exact     1698/1698
(100 %)
0 diff
(100 %id)
CR596992 fetal brain .o 233 to 1899 1 to 1667 exact     1667/1667
(100 %)
0 diff
(100 %id)
CR612305 Placenta Cot 25-normalized .o 233 to 1908 1 to 1676 exact     1676/1676
(100 %)
0 diff
(100 %id)
CR622735 Placenta Cot 25-normalized .o 233 to 1931 1 to 1699 exact     1699/1699
(100 %)
0 diff
(100 %id)
BX459038 placenta .o 233 to 1111 1 to 875 A135R A136P L137S fully sequenced,   875/875
(100 %)
5 diff
(99.5 %id)
BX338367 Placenta Cot 25-normalized .o 233 to 970 1 to 736 A132X A135R A136P L137X     736/816
(90 %)
26 diff
(96.9 %id)
BC020279 Brain, anaplastic oligodendroglioma with1p/19q loss .o 233 to 1960 1 to 1728 exact available from MGC, AAA   1728/1728
(100 %)
0 diff
(100 %id)
TI_57220855   .o 233 to 1126 67 to 957 L137S     891/959
(92 %)
26 diff
(97.3 %id)
TI_57220933   .o 233 to 1124 65 to 951 A128C A136C     887/954
(92 %)
34 diff
(96.5 %id)
AB097007 lung .o 234 to 1960 1 to 1727 exact     1727/1727
(100 %)
1 diff
(100.0 %id)
DB493129 hypothalamus .o 234 to 652 1 to 419       419/419
(100 %)
0 diff
(100 %id)
BU149980 dorsal root ganglia .o 234 to 1057 1 to 830 exact     830/841
(98 %)
11 diff
(98.7 %id)
BP296865   .o 234 to 813 1 to 580 exact     580/580
(100 %)
0 diff
(100 %id)
BM923872 pooled colon, kidney, stomach .o 235 to 1008 1 to 777 exact     777/876
(88 %)
16 diff
(98.2 %id)
BQ233196 epithelioid carcinoma, Pancreas .o 235 to 1019 1 to 786 exact     786/919
(85 %)
5 diff
(99.5 %id)
BM763357 myeloma .o 235 to 902 1 to 668 exact     668/668
(100 %)
0 diff
(100 %id)
BQ434017 melanotic melanoma, skin .o 236 to 1091 1 to 866 exact     866/870
(99 %)
21 diff
(97.6 %id)
CX786610 human embryonic stem cells .o 236 to 1040 1 to 805 exact     805/805
(100 %)
0 diff
(100 %id)
DB263927 uterus .o 236 to 830 2 to 596 exact capped   595/595
(100 %)
0 diff
(100 %id)
CN399591 embryonic stem cells, DMSO-treated H9 cellline .o 237 to 861 1 to 625 exact     625/625
(100 %)
0 diff
(100 %id)
CN399614 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .o 237 to 901 1 to 665 exact     665/665
(100 %)
1 diff
(99.9 %id)
CR592063 Neuroblastoma Cot 25-normalized .o 237 to 1945 1 to 1709 exact     1709/1709
(100 %)
0 diff
(100 %id)
BP252968 Kidney .o 237 to 819 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
DB113365 thymus .o 237 to 821 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
BQ213594 embryonal carcinoma, cell line, testis .o 238 to 1095 1 to 865 exact     865/865
(100 %)
13 diff
(98.5 %id)
CR592761 fetal liver .o 239 to 1902 1 to 1664 exact     1664/1664
(100 %)
0 diff
(100 %id)
BM920901 pooled brain, lung, testis .o 239 to 1136 1 to 905 exact     905/1049
(86 %)
24 diff
(97.8 %id)
CR616699 Placenta Cot 25-normalized .o 240 to 1932 1 to 1693 exact     1693/1693
(100 %)
0 diff
(100 %id)
CR617710 T cells (Jurkat cell line) Cot10-normalized .o 240 to 1931 1 to 1692 exact     1692/1692
(100 %)
0 diff
(100 %id)
BQ059074 lymph, lymphoma, cell line .o 240 to 1019 1 to 777 exact     777/1031
(75 %)
8 diff
(99.3 %id)
DA035948 breast .o 241 to 831 2 to 592 exact capped   591/591
(100 %)
0 diff
(100 %id)
CR619291 Placenta Cot 25-normalized .o 242 to 1932 1 to 1691 exact     1691/1691
(100 %)
0 diff
(100 %id)
DA672818   .o 242 to 840 2 to 600 exact capped   599/599
(100 %)
0 diff
(100 %id)
BQ883995 dorsal root ganglia .o 245 to 1034 1 to 793 exact     793/987
(80 %)
9 diff
(99.1 %id)
DA675580   .o 247 to 827 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
TI_57218754   .o 248 to 1090 36 to 881 exact     846/881
(96 %)
17 diff
(98.1 %id)
TI_57196768   .o 248 to 1006 59 to 819 G113W A114S A115S A116R P117A ...     761/819
(92 %)
16 diff
(98.1 %id)
CR592862 Placenta Cot 25-normalized .o 249 to 1290 1 to 1042 exact     1042/1042
(100 %)
0 diff
(100 %id)
BM457644 lymph, lymphoma, cell line .o 249 to 1072 1 to 834 exact     834/892
(93 %)
17 diff
(98.1 %id)
TI_57163460   .o 250 to 1037 42 to 829 L137S     788/829
(95 %)
10 diff
(98.8 %id)
TI_57239945   .o 250 to 1024 38 to 814 E108*     777/814
(95 %)
13 diff
(98.5 %id)
CR591535 Placenta Cot 25-normalized .o 251 to 1920 1 to 1670 exact     1670/1670
(100 %)
0 diff
(100 %id)
CR593080 Placenta Cot 25-normalized .o 252 to 1929 1 to 1678 exact     1678/1678
(100 %)
0 diff
(100 %id)
CR596912 Placenta Cot 25-normalized .o 252 to 1908 1 to 1657 exact     1657/1657
(100 %)
0 diff
(100 %id)
CR600306 Placenta Cot 25-normalized .o 252 to 1932 1 to 1681 exact     1681/1681
(100 %)
0 diff
(100 %id)
CR608469 B cells (Ramos cell line) Cot 25-normalized .o 252 to 1925 1 to 1674 exact     1674/1674
(100 %)
0 diff
(100 %id)
CR617542 HeLa cells Cot 25-normalized .o 252 to 1925 1 to 1674 exact     1674/1674
(100 %)
0 diff
(100 %id)
BX340000 Placenta Cot 25-normalized .o 252 to 1071 2 to 814 exact fully sequenced,   813/814
(99 %)
13 diff
(98.5 %id)
TI_44159379   .o 252 to 1101 69 to 918 A8C V9R G10W L11P T12D ...     850/919
(92 %)
19 diff
(98.0 %id)
CR603751 Placenta Cot 25-normalized .o 254 to 1932 1 to 1679 exact     1679/1679
(100 %)
0 diff
(100 %id)
CR605649 fetal brain .o 254 to 1957 1 to 1704 exact     1704/1704
(100 %)
0 diff
(100 %id)
CR609022 Placenta Cot 25-normalized .o 254 to 1957 1 to 1704 exact     1704/1704
(100 %)
0 diff
(100 %id)
CR620085 thymus .o 254 to 1945 1 to 1692 exact     1692/1692
(100 %)
0 diff
(100 %id)
CR624287 HeLa cells Cot 25-normalized .o 254 to 1926 1 to 1673 exact     1673/1673
(100 %)
0 diff
(100 %id)
BX420725 brain, fetal brain .o 254 to 1126 1 to 851 A135R A136P L137S fully sequenced,   851/851
(100 %)
13 diff
(98.5 %id)
BM458412 lymph, lymphoma, cell line .o 254 to 1228 1 to 996 exact     996/1125
(88 %)
38 diff
(96.7 %id)
BU508966 leiomyosarcoma, uterus .o 254 to 1017 1 to 777 exact     777/915
(84 %)
19 diff
(98.0 %id)
BM927104 brain .o 255 to 1024 1 to 773 exact     773/1048
(73 %)
6 diff
(99.5 %id)
CX760809 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .o 255 to 1055 1 to 792 exact   Submitted on the opposite strand 792/795
(99 %)
13 diff
(98.4 %id)
TI_57232530   .o 255 to 1036 22 to 803 M83C P84Q A85Q A86H Y88T ...     782/803
(97 %)
16 diff
(98.1 %id)
BQ897285 melanotic melanoma, cell line, skin .o 256 to 1019 1 to 761 exact     761/889
(85 %)
4 diff
(99.6 %id)
BU180311 melanotic melanoma, cell line, skin .o 256 to 1028 1 to 774 exact     774/897
(86 %)
11 diff
(98.8 %id)
BQ940906 large cell carcinoma, lung .o 256 to 1139 1 to 896 exact     896/933
(96 %)
17 diff
(98.2 %id)
TI_57229114   .o 256 to 1100 84 to 937 K134N A135G A136G L137P     854/873
(97 %)
31 diff
(96.5 %id)
CX763107 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .o 257 to 932 1 to 676 exact   Submitted on the opposite strand 676/676
(100 %)
0 diff
(100 %id)
TI_57162188   .o 257 to 963 86 to 792 exact     707/794
(89 %)
8 diff
(99.0 %id)
BM920526 pooled lung and spleen .o 258 to 1139 1 to 894 exact     894/1118
(79 %)
15 diff
(98.7 %id)
BQ643367 lymph, lymphoma, cell line .o 258 to 1019 1 to 765 exact     765/941
(81 %)
12 diff
(98.8 %id)
BQ953661 eye, normal pigmented retinal epithelium .o 258 to 1099 1 to 858 exact     858/885
(96 %)
13 diff
(98.6 %id)
CN399595 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .o 260 to 1019 12 to 772 exact     761/776
(98 %)
13 diff
(98.4 %id)
TI_151797661   .o 260 to 848 118 to 707 A136G     590/591
(99 %)
5 diff
(99.2 %id)
BM916995 blood, natural killer cells, cell line .o 261 to 995 1 to 735 exact     735/746
(98 %)
1 diff
(99.9 %id)
CR592192 Placenta Cot 25-normalized .o 262 to 1925 1 to 1664 exact     1664/1664
(100 %)
0 diff
(100 %id)
BM917854 blood, natural killer cells, cell line .o 262 to 1127 1 to 876 exact     876/1005
(87 %)
23 diff
(97.8 %id)
CR608471 T cells (Jurkat cell line) Cot10-normalized .o 263 to 1906 1 to 1644 exact     1644/1644
(100 %)
0 diff
(100 %id)
BQ953045 epidermoid carcinoma, cell line, lung .o 263 to 1096 1 to 842 exact     842/945
(89 %)
19 diff
(98.0 %id)
BM455999 lymph, lymphoma, cell line .o 264 to 1137 1 to 884 exact     884/967
(91 %)
16 diff
(98.4 %id)
BQ939846 eye, normal pigmented retinal epithelium .o 264 to 1081 1 to 829 exact     829/937
(88 %)
23 diff
(97.6 %id)
CR601420 Placenta Cot 25-normalized .o 265 to 1903 1 to 1639 exact     1639/1639
(100 %)
0 diff
(100 %id)
CR622754 T cells (Jurkat cell line) Cot10-normalized .o 265 to 1964 1 to 1700 exact tiling clone,   1700/1700
(100 %)
0 diff
(100 %id)
CR622811 B cells (Ramos cell line) .o 265 to 1929 1 to 1665 exact     1665/1665
(100 %)
0 diff
(100 %id)
CR622812 Placenta Cot 25-normalized .o 267 to 1930 1 to 1664 exact     1664/1664
(100 %)
0 diff
(100 %id)
BM457908 lymph, lymphoma, cell line .o 268 to 1160 1 to 898 exact     898/900
(99 %)
10 diff
(98.9 %id)
CR609443 B cells (Ramos cell line) Cot 25-normalized .o 269 to 1928 1 to 1660 exact     1660/1660
(100 %)
0 diff
(100 %id)
BQ686810 ductal carcinoma, cell line, Pancreas .o 270 to 1019 1 to 748 exact     748/1001
(74 %)
5 diff
(99.6 %id)
BU527384 epidermoid carcinoma, cell line, lung .o 270 to 1018 1 to 753 exact     753/865
(87 %)
5 diff
(99.5 %id)
BU527810 epidermoid carcinoma, cell line, lung .o 270 to 1157 1 to 901 exact     901/906
(99 %)
23 diff
(97.5 %id)
BU528149 epidermoid carcinoma, cell line, lung .o 270 to 1043 1 to 779 exact     779/823
(94 %)
12 diff
(98.6 %id)
BU528193 epidermoid carcinoma, cell line, lung .o 270 to 1168 1 to 903 exact     903/904
(99 %)
4 diff
(99.6 %id)
BM801565 duodenal adenocarcinoma, cell line, small intestine .o 271 to 1039 1 to 774 exact     774/908
(85 %)
6 diff
(99.4 %id)
BM561477 blood, natural killer cells, cell line .o 277 to 1139 1 to 884 exact     884/1011
(87 %)
26 diff
(97.5 %id)
TI_154188220   .o 278 to 942 184 to 848 A98V A136D     665/918
(72 %)
23 diff
(97.5 %id)
BU838406 dorsal root ganglia .o 288 to 1091 1 to 815 exact     815/1006
(81 %)
22 diff
(97.9 %id)
BQ053435 blood, natural killer cells, cell line .o 289 to 1242 1 to 963 exact     963/1079
(89 %)
51 diff
(95.3 %id)
TI_154186103   .o 296 to 1077 121 to 896 exact     776/962
(80 %)
13 diff
(98.7 %id)
TI_57237501   .o 305 to 1018 29 to 740 G10A L11*     712/740
(96 %)
8 diff
(99.0 %id)
BX339999 Placenta Cot 25-normalized .o 1041 to 1929 876 to 1   fully sequenced,   876/876
(100 %)
7 diff
(99.3 %id)
BX454564 placenta .o 1082 to 1957 877 to 1   fully sequenced,   877/877
(100 %)
4 diff
(99.6 %id)
BX351937 Placenta Cot 25-normalized .o 1084 to 1957 884 to 1       884/888
(99 %)
33 diff
(96.3 %id)
BX435594 brain, fetal brain .o 1096 to 1957 867 to 1   fully sequenced,   867/867
(100 %)
17 diff
(98.1 %id)
TI_151711641   .o 1284 to 1960 798 to 115   AAA   684/1048
(65 %)
21 diff
(98.0 %id)
AA448506   .p 1 to 438 5 to 439   tiling clone, fully sequenced,   437/437
(100 %)
7 diff
(98.4 %id)
AA031849 uterus .p 17 to 438 7 to 432   tiling clone, fully sequenced,   426/432
(98 %)
17 diff
(96.1 %id)
BG191226   .p 77 to 748 1 to 672   tiling clone, AAA   672/672
(100 %)
12 diff
(98.3 %id)
BG217210   .p 93 to 748 69 to 723       655/855
(76 %)
32 diff
(96.3 %id)
AA298430 lung .p 295 to 646 1 to 354   tiling clone,   354/354
(100 %)
7 diff
(98.1 %id)
AA031850 uterus .p 377 to 748 375 to 1   tiling clone, fully sequenced,   375/375
(100 %)
4 diff
(99.0 %id)
AA447523   .p 377 to 749 378 to 3   fully sequenced,   376/378
(99 %)
0 diff
(100 %id)
BU527101 epidermoid carcinoma, cell line, lung .q 1 to 773 1 to 775 exact tiling clone,   775/897
(86 %)
5 diff
(99.5 %id)
DA054601 cerebellum .r 1 to 547 2 to 548 exact tiling clone, capped   547/547
(100 %)
1 diff
(99.9 %id)
BP377748 uterus .r 31 to 581 1 to 550 exact     550/550
(100 %)
3 diff
(99.5 %id)
BP214050 cerebrum .r 32 to 612 1 to 580 exact     580/580
(100 %)
1 diff
(99.9 %id)
BP213748 cerebrum .r 33 to 611 1 to 578 Y88H     578/578
(100 %)
2 diff
(99.7 %id)
BP239294 Liver .r 33 to 582 1 to 550 exact     550/550
(100 %)
4 diff
(99.3 %id)
DA009756 adrenal gland .r 34 to 603 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA012631 adrenal gland .r 34 to 606 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA081368 cerebellum .r 34 to 592 2 to 559 E108G T109P L110W A111L G112V ... capped   558/558
(100 %)
2 diff
(99.7 %id)
DA376479 thalamus .r 34 to 596 2 to 565 S70G capped   564/564
(100 %)
2 diff
(99.7 %id)
DA378828 thalamus .r 34 to 677 2 to 645 exact capped   644/645
(99 %)
3 diff
(99.6 %id)
DA665699   .r 34 to 582 2 to 550 I23T capped   549/549
(100 %)
1 diff
(99.9 %id)
DA689036   .r 34 to 573 2 to 541 exact capped   540/540
(100 %)
1 diff
(99.9 %id)
DA701190   .r 34 to 554 2 to 523 Q99X L110P A111G G112W E113* capped   522/522
(100 %)
1 diff
(99.9 %id)
DA984517 synovial membrane tissue from rheumatioidarthritis .r 34 to 595 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DB115796 thymus .r 34 to 599 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DB268776 uterus .r 36 to 616 2 to 582 exact capped   581/582
(99 %)
1 diff
(99.9 %id)
BM461449 eye, retinoblastoma .r 50 to 886 1 to 841 exact     841/1051
(80 %)
12 diff
(98.9 %id)
BQ276304 carcinoma, cell line, Prostate .r 51 to 1041 1 to 992 exact     992/1055
(94 %)
31 diff
(97.1 %id)
CN402130 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .r 60 to 682 1 to 623 exact     623/623
(100 %)
0 diff
(100 %id)
DB244170 uterus, tumor tissue .r 64 to 622 2 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
DA205875 brain .r 65 to 637 2 to 574 P55S capped   573/573
(100 %)
1 diff
(99.9 %id)
DA849885 placenta .r 65 to 619 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DB102178 thymus .r 65 to 619 2 to 556 exact capped   555/555
(100 %)
0 diff
(100 %id)
DA060618 cerebellum .r 70 to 635 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA150449 amygdala .r 70 to 650 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
DA525033 brain .r 72 to 632 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA684452   .r 72 to 606 2 to 536 exact capped   535/535
(100 %)
0 diff
(100 %id)
DA488138 brain .r 77 to 650 2 to 575 C36F capped   574/574
(100 %)
2 diff
(99.7 %id)
DA687576   .r 80 to 619 8 to 547 exact capped   540/540
(100 %)
1 diff
(99.9 %id)
DA175303 amygdala .r 83 to 642 2 to 561 exact capped   560/560
(100 %)
1 diff
(99.9 %id)
DA422648 cervix .r 84 to 612 2 to 530 I22T capped   529/529
(100 %)
2 diff
(99.7 %id)
DA475620   .r 84 to 592 2 to 511 Q91X capped   510/510
(100 %)
2 diff
(99.7 %id)
DA821949 pericardium .r 84 to 642 2 to 560 exact capped   559/559
(100 %)
1 diff
(99.9 %id)
DA003592   .r 85 to 558 2 to 475 S48X capped   474/474
(100 %)
0 diff
(100 %id)
AL117413 Kidney .r 87 to 1994 1 to 1908 exact tiling clone, available from DKFZ, AAA   1908/1908
(100 %)
1 diff
(100.0 %id)
DA383366 thalamus .r 93 to 660 2 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
BG912477 anaplastic oligodendroglioma with 1p/19qloss, brain .r 93 to 738 1 to 646 A98G A105V     646/649
(99 %)
12 diff
(98.2 %id)
DA928707 small intestine .r 95 to 565 2 to 472 exact capped   471/471
(100 %)
0 diff
(100 %id)
DA951277 Spleen .r 95 to 653 2 to 560 P95L capped   559/559
(100 %)
2 diff
(99.7 %id)
DA923955 small intestine .r 96 to 677 2 to 583 M83V capped   582/583
(99 %)
2 diff
(99.7 %id)
DA888302   .r 98 to 647 2 to 551 exact capped   550/550
(100 %)
0 diff
(100 %id)
DA516811 brain .r 100 to 645 2 to 547 exact capped   546/546
(100 %)
1 diff
(99.9 %id)
BX483353   .r 105 to 608 1 to 504 V15A     504/504
(100 %)
2 diff
(99.7 %id)
BQ052397 blood, natural killer cells, cell line .r 112 to 1039 1 to 926 exact     926/1040
(89 %)
19 diff
(98.2 %id)
BM799662 eye, retinoblastoma .r 116 to 1026 1 to 913 exact     913/1075
(84 %)
14 diff
(98.7 %id)
DA046431 bladder .r 124 to 637 2 to 515 exact capped   514/514
(100 %)
0 diff
(100 %id)
DA425957 colon .r 247 to 808 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
BG397293 B-cells, primary B-cells from tonsils (cell line) .r 373 to 1251 1 to 891       891/1015
(87 %)
27 diff
(97.4 %id)
BQ441767 embryonal carcinoma, cell line, testis .r 399 to 974 1 to 578       578/902
(64 %)
11 diff
(98.8 %id)
BG164759 hypernephroma, cell line, Kidney .r 464 to 750 1 to 290       290/290
(100 %)
5 diff
(98.3 %id)
AV690741 hepatocellular carcinoma .r 468 to 1013 1 to 543       543/573
(94 %)
7 diff
(98.8 %id)
DA343915 substantia nigra .s 1 to 576 2 to 577 exact tiling clone, capped   581/581
(100 %)
1 diff
(99.9 %id)
DA365915 subthalamic nucleus .s 81 to 502 2 to 424   capped   423/423
(100 %)
1 diff
(99.8 %id)
AJ705977 bone marrow .t 1 to 430 3 to 432 exact tiling clone,   432/432
(100 %)
4 diff
(99.1 %id)
BX398867 Placenta Cot 25-normalized .u 1 to 1001 1 to 987 Q111Z P126X A127S S128Q L129P ... tiling clone,   987/1057
(93 %)
18 diff
(98.3 %id)
AK310083 Spleen .u 10 to 1306 1 to 1297 S149F tiling clone,   1297/1297
(100 %)
1 diff
(100.0 %id)
DB108171 thymus .u 31 to 601 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
BI833507 pooled pancreas and spleen .u 59 to 972 1 to 908 G30D C31A Q32S Q33S H34T ... tiling clone,   908/919
(98 %)
28 diff
(97.0 %id)
TI_57166586   .u 59 to 972 28 to 935 G30D C31A Q32S Q33S H34T ...     908/946
(95 %)
33 diff
(96.6 %id)
BX398866 Placenta Cot 25-normalized .u 1078 to 2043 953 to 1   tiling clone,   953/991
(96 %)
19 diff
(98.1 %id)
DA001461   .va 1 to 320 2 to 321   capped   320/320
(100 %)
0 diff
(100 %id)
DA033344   .va 1 to 578 2 to 579   tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DA030889   .va 31 to 594 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB264496 uterus .va 42 to 606 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB003509 breast, tumor tissue .va 60 to 597 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DB003516 breast, tumor tissue .va 60 to 602 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB003521 breast, tumor tissue .va 60 to 604 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BQ278704 adenocarcinoma, cell line, breast .va 83 to 831 1 to 764 exact tiling clone,   764/999
(76 %)
22 diff
(97.8 %id)
BU956144 adenocarcinoma, cell line, breast .va 83 to 727 1 to 650 exact tiling clone,   650/1016
(63 %)
12 diff
(98.9 %id)
BU956352 adenocarcinoma, cell line, breast .va 83 to 650 1 to 571 A90G S91L L92S A93G A94L ...     571/1215
(46 %)
14 diff
(98.9 %id)
BF974137 B-cells, primary B-cells from tonsils (cell line) .va 95 to 972 1 to 870 I4V V9X C10V R11P P12A ...     847/1174
(72 %)
79 diff
(93.3 %id)
DA063806 cerebellum .vb 1 to 570 2 to 571   tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
CV381644 breast_normal .vb 510 to 775 272 to 3   tiling clone, Submitted on the opposite strand 270/389
(69 %)
0 diff
(100 %id)
DB169140 kidney, tumor tissue .vc 1 to 564 2 to 565 exact tiling clone, capped   564/564
(100 %)
0 diff
(100 %id)
DA587289 lung .vd 1 to 558 2 to 560 exact tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DB181209 liver, tumor tissue .ve 1 to 555 2 to 556 exact tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
DA684221   .vf 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
BM697659 eye, fetal eyes .vg-u 1 to 532 1 to 532 exact tiling clone,   532/532
(100 %)
0 diff
(100 %id)
AK027728 ovary, tumor tissue Gene SHISA5, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AK298799   Gene SHISA5, variant not shown         Suspected internal deletion, this clone was ignored    
AW378869 head_neck Gene SHISA5, variant not shown         This clone was ignored    
BE708802 head_neck Gene SHISA5, variant not shown         This clone was ignored    
DA671092   Gene SHISA5, variant not shown       capped This clone was ignored    
105 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI