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Gene SCOCTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
441 supporting clones for gene SCOC back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN367654 embryonic stem cells, DMSO-treated H9 cellline .a 1 to 646 1 to 646 exact tiling clone,   646/646
(100 %)
0 diff
(100 %id)
NM_001153484.1   .a 1 to 1959 1 to 1959 exact RefSeq, AAA   1959/1959
(100 %)
0 diff
(100 %id)
DA062195 cerebellum .a 43 to 600 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA078081 cerebellum .a 43 to 606 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA752217   .a 43 to 604 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB073206 testis .a 43 to 569 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DB499522 hypothalamus .a 54 to 540 1 to 487       487/487
(100 %)
0 diff
(100 %id)
DA533476 brain .a 88 to 641 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
TI_44168520   .a 94 to 617 82 to 606       525/606
(86 %)
6 diff
(99.1 %id)
DB466431 hippocampus .a 112 to 541 1 to 430       430/430
(100 %)
0 diff
(100 %id)
DB498790 hypothalamus .a 112 to 614 1 to 505       505/505
(100 %)
4 diff
(99.3 %id)
TI_45210961   .a 112 to 899 93 to 881       789/881
(89 %)
17 diff
(98.1 %id)
TI_44343792   .a 112 to 857 94 to 851       758/891
(85 %)
22 diff
(97.6 %id)
BF966230 brain, hippocampus .a 118 to 857 1 to 739       739/1032
(71 %)
35 diff
(96.7 %id)
AF330205   .a 122 to 756 13 to 647       635/653
(97 %)
7 diff
(99.0 %id)
BP210958 cerebellum .a 125 to 703 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DA357727 subthalamic nucleus .a 126 to 703 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
AV716036   .a 126 to 842 1 to 715       715/716
(99 %)
3 diff
(99.6 %id)
TI_44166298   .a 126 to 764 89 to 726       638/726
(87 %)
9 diff
(98.8 %id)
TI_44167799   .a 126 to 952 86 to 916       831/921
(90 %)
24 diff
(97.4 %id)
BU170288 eye, retinoblastoma .a 128 to 952 1 to 829       829/835
(99 %)
6 diff
(99.3 %id)
AB015335 brain .a 130 to 593 1 to 464       464/464
(100 %)
0 diff
(100 %id)
DR157293 human embryonic stem cells differentiated toan early endodermal cell type .a 130 to 886 1 to 757       757/757
(100 %)
0 diff
(100 %id)
BU159781 eye, retinoblastoma .a 133 to 1019 1 to 899       899/899
(100 %)
21 diff
(97.7 %id)
TI_44343976   .a 133 to 823 90 to 779       690/779
(88 %)
7 diff
(99.2 %id)
BP198194 adrenal gland .a 134 to 715 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CR594454 adult brain .a 134 to 1928 1 to 1795       1795/1795
(100 %)
0 diff
(100 %id)
BX422967 adult brain, brain .a 134 to 1047 1 to 912       912/912
(100 %)
17 diff
(98.2 %id)
BX450121 adult brain, brain .a 134 to 1046 1 to 909       909/929
(97 %)
24 diff
(97.5 %id)
BP376271 uterus .a 134 to 685 1 to 552       552/552
(100 %)
0 diff
(100 %id)
BP378008 uterus .a 134 to 686 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BG721094 testis .a 135 to 843 1 to 710       710/711
(99 %)
10 diff
(98.6 %id)
TI_44169035   .a 135 to 850 87 to 797       711/797
(89 %)
15 diff
(98.2 %id)
CB112176 Liver .a 137 to 726 1 to 590       590/590
(100 %)
0 diff
(100 %id)
AU309833 neuroblastoma .a 137 to 710 1 to 574       574/574
(100 %)
0 diff
(100 %id)
BM836627 Ascites, stomach .a 138 to 632 1 to 495       495/495
(100 %)
0 diff
(100 %id)
BP210698 cerebellum .a 139 to 718 1 to 580       580/580
(100 %)
0 diff
(100 %id)
CB961369 placenta, pre-eclamptic placenta .a 139 to 859 25 to 751       727/779
(93 %)
18 diff
(97.7 %id)
BP207412 coronary artery .a 140 to 720 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP209058 cerebellum .a 140 to 719 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DB467810 hippocampus .a 140 to 604 1 to 464       464/464
(100 %)
1 diff
(99.8 %id)
DB474439 hippocampus .a 140 to 637 1 to 499       499/501
(99 %)
3 diff
(99.5 %id)
DB477654 hippocampus .a 140 to 630 1 to 491       491/491
(100 %)
0 diff
(100 %id)
DB479372 hippocampus .a 140 to 609 1 to 470       470/470
(100 %)
1 diff
(99.8 %id)
DB479389 hippocampus .a 140 to 608 1 to 469       469/469
(100 %)
1 diff
(99.8 %id)
DB482608 hippocampus .a 140 to 631 1 to 493       493/493
(100 %)
2 diff
(99.6 %id)
DB483227 hippocampus .a 140 to 633 1 to 494       494/494
(100 %)
0 diff
(100 %id)
DB483527 hippocampus .a 140 to 595 1 to 456       456/456
(100 %)
0 diff
(100 %id)
DB483705 hippocampus .a 140 to 600 1 to 461       461/461
(100 %)
0 diff
(100 %id)
BP257098 heart .a 140 to 709 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BP257761 heart .a 140 to 720 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA601990   .a 140 to 704 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
TI_44166771   .a 140 to 832 84 to 777       694/780
(88 %)
10 diff
(98.8 %id)
TI_44166805   .a 140 to 614 93 to 569       477/686
(69 %)
8 diff
(98.9 %id)
TI_44167560   .a 140 to 875 83 to 820       738/820
(90 %)
12 diff
(98.6 %id)
TI_45208969   .a 140 to 762 95 to 717       623/717
(86 %)
8 diff
(98.9 %id)
TI_45213205   .a 140 to 898 145 to 908       764/913
(83 %)
30 diff
(96.8 %id)
TI_45214341   .a 140 to 835 83 to 783       701/783
(89 %)
23 diff
(97.1 %id)
TI_44343827   .a 140 to 935 88 to 887       800/887
(90 %)
12 diff
(98.7 %id)
TI_44345265   .a 140 to 952 78 to 902       825/904
(91 %)
24 diff
(97.4 %id)
BP343804 stomach mucosa .a 140 to 724 1 to 585       585/585
(100 %)
0 diff
(100 %id)
DA062132 cerebellum .a 141 to 705 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA077661 cerebellum .a 141 to 712 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA139645 alzheimer cortex .a 141 to 708 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA358089 subthalamic nucleus .a 141 to 691 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA377109 thalamus .a 141 to 694 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
TI_44345014   .a 141 to 890 119 to 865       747/866
(86 %)
19 diff
(97.9 %id)
DA645670.
matches multiple genes
mammary gland .a 141 to 996 2 to 863   capped also hits gene RBM39 862/862
(100 %)
13 diff
(98.5 %id)
DA899421 skeletal muscle .a 141 to 690 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB040162 testis .a 141 to 716 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB257300 uterus .a 141 to 721 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB294045   .a 141 to 963 2 to 824   capped   823/823
(100 %)
4 diff
(99.6 %id)
BM461427 eye, retinoblastoma .a 142 to 1058 1 to 931       931/1025
(90 %)
26 diff
(97.5 %id)
BM465870 eye, retinoblastoma .a 142 to 1009 1 to 874       874/1011
(86 %)
12 diff
(98.9 %id)
DA261264 caudate nucleus .a 143 to 704 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA362565 subthalamic nucleus .a 143 to 703 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BP210113 cerebellum .a 144 to 726 1 to 583       583/583
(100 %)
0 diff
(100 %id)
CR619629 fetal brain .a 144 to 1936 1 to 1793       1793/1793
(100 %)
0 diff
(100 %id)
TI_44168476   .a 144 to 776 88 to 720       633/720
(87 %)
7 diff
(99.1 %id)
TI_45210088   .a 144 to 979 88 to 930       843/1190
(70 %)
34 diff
(97.2 %id)
DA355846 subthalamic nucleus .a 145 to 703 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BP259643 heart .a 145 to 724 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DB256835 uterus .a 145 to 637 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
DA140369 alzheimer cortex .a 146 to 731 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
TI_57171897   .a 146 to 979 25 to 865       841/943
(89 %)
28 diff
(97.1 %id)
DA642415 Liver .a 146 to 770 2 to 626   capped   625/625
(100 %)
0 diff
(100 %id)
BP225360   .a 147 to 728 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU156268 melanotic melanoma, skin .a 147 to 970 1 to 833       833/952
(87 %)
18 diff
(98.2 %id)
CR620438 Placenta Cot 25-normalized .a 148 to 1923 1 to 1776       1776/1776
(100 %)
0 diff
(100 %id)
DB467895 hippocampus .a 148 to 609 1 to 463       463/463
(100 %)
3 diff
(99.4 %id)
DA695410   .a 148 to 734 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BP210231 cerebellum .a 149 to 728 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DB458732 testis .a 149 to 597 1 to 449       449/449
(100 %)
0 diff
(100 %id)
DB460873 testis .a 149 to 537 1 to 389       389/389
(100 %)
0 diff
(100 %id)
DA200467 brain .a 150 to 641 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DA562676 heart .a 150 to 717 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA570007 whole embryo, mainly head .a 150 to 1032 2 to 880   capped   879/879
(100 %)
10 diff
(98.9 %id)
CR595594 fetal brain .a 152 to 1941 1 to 1790       1790/1790
(100 %)
0 diff
(100 %id)
CR605728 fetal brain .a 152 to 1924 1 to 1773       1773/1773
(100 %)
0 diff
(100 %id)
BX419138 brain, fetal brain .a 152 to 1120 1 to 973       973/973
(100 %)
9 diff
(99.1 %id)
BX432474 brain, fetal brain .a 152 to 884 1 to 733       733/733
(100 %)
6 diff
(99.2 %id)
BX428919 brain, fetal brain .a 152 to 1044 1 to 893       893/893
(100 %)
5 diff
(99.5 %id)
BX441466 brain, fetal brain .a 152 to 1065 1 to 913       913/913
(100 %)
1 diff
(99.9 %id)
TI_57236550   .a 152 to 926 26 to 804   AAA   779/931
(83 %)
26 diff
(97.3 %id)
CA390295 eye, RPE/choroid .a 153 to 763 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BQ434604 melanotic melanoma, skin .a 153 to 890 1 to 744       744/884
(84 %)
7 diff
(99.3 %id)
CR601810 fetal brain .a 154 to 1674 1 to 1521       1521/1521
(100 %)
0 diff
(100 %id)
CR611757 Placenta Cot 25-normalized .a 154 to 1924 1 to 1771       1771/1771
(100 %)
0 diff
(100 %id)
CR618746 placenta .a 154 to 1941 1 to 1788       1788/1788
(100 %)
0 diff
(100 %id)
BX416481 neuroblastoma .a 154 to 1200 1 to 1033       1033/1051
(98 %)
26 diff
(97.6 %id)
BX458267 placenta .a 154 to 1076 1 to 924       924/924
(100 %)
5 diff
(99.5 %id)
BX335771 Placenta Cot 25-normalized .a 154 to 1145 1 to 983       983/992
(99 %)
41 diff
(95.9 %id)
BX402332 Placenta Cot 25-normalized .a 154 to 1205 1 to 1041       1041/1041
(100 %)
15 diff
(98.6 %id)
BM458079 leiomyosarcoma, uterus .a 154 to 1077 1 to 937       937/1070
(87 %)
24 diff
(97.8 %id)
CX873295 embryonic stem .a 154 to 947 1 to 794       794/794
(100 %)
0 diff
(100 %id)
CN484103 eye .a 155 to 698 1 to 544       544/544
(100 %)
0 diff
(100 %id)
BY799155 eye .a 156 to 751 1 to 596       596/596
(100 %)
0 diff
(100 %id)
BQ720093 sympathetic trunk .a 156 to 1044 1 to 889       889/890
(99 %)
11 diff
(98.8 %id)
BM458004 leiomyosarcoma, uterus .a 157 to 1058 1 to 920   AAA   920/1080
(85 %)
24 diff
(97.8 %id)
BC016511 Ovary, adenocarcinoma .a 159 to 1953 1 to 1795   tiling clone, available from MGC, AAA   1795/1795
(100 %)
0 diff
(100 %id)
BM541557 leiomyosarcoma, uterus .a 164 to 1250 1 to 1090       1090/1110
(98 %)
39 diff
(96.5 %id)
BX442408 brain, fetal brain .a 165 to 1219 20 to 1064       1045/1078
(96 %)
26 diff
(97.6 %id)
TI_57233580   .a 165 to 806 27 to 665       639/665
(96 %)
10 diff
(98.5 %id)
TI_44345789   .a 168 to 941 84 to 858       775/858
(90 %)
15 diff
(98.3 %id)
DA087446 cerebellum .a 169 to 739 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA351949 substantia nigra .a 169 to 727 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
CR597979 Placenta Cot 25-normalized .a 169 to 1859 1 to 1691       1691/1691
(100 %)
0 diff
(100 %id)
BQ718741 sympathetic trunk .a 170 to 1108 1 to 942       942/942
(100 %)
12 diff
(98.8 %id)
DB505587 hypothalamus .a 171 to 633 1 to 463       463/463
(100 %)
3 diff
(99.4 %id)
BU508748 leiomyosarcoma, uterus .a 173 to 1029 1 to 874       874/915
(95 %)
22 diff
(97.6 %id)
DA137534 alzheimer cortex .a 176 to 749 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BF033375 adenocarcinoma, ovary .a 176 to 860 1 to 682   available from MGC,   682/919
(74 %)
9 diff
(99.1 %id)
DA356037 subthalamic nucleus .a 178 to 731 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CN367650 embryonic stem cells, DMSO-treated H9 cellline .a 178 to 830 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
DB024731 testis .a 178 to 725 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
CN367656 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 179 to 823 1 to 645       645/645
(100 %)
0 diff
(100 %id)
CT003256 T-Lymphocytes .a 181 to 999 1 to 822       822/822
(100 %)
3 diff
(99.7 %id)
DB106554 thymus .a 181 to 742 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA518319 brain .a 182 to 724 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA057298 cerebellum .a 185 to 783 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
CR600463 HeLa cells Cot 25-normalized .a 207 to 1901 1 to 1695       1695/1695
(100 %)
0 diff
(100 %id)
BX341848   .a 207 to 978 1 to 762   fully sequenced,   762/762
(100 %)
0 diff
(100 %id)
BX341847   .a 948 to 1901 949 to 1   fully sequenced,   949/949
(100 %)
2 diff
(99.8 %id)
BF966887 brain, hippocampus .a 1076 to 1885 835 to 28       808/949
(85 %)
0 diff
(100 %id)
DB356738 whole embryo, mainly head .a 1357 to 1953 593 to 1       593/593
(100 %)
11 diff
(98.2 %id)
DB384006   .a 1396 to 1953 557 to 1       557/558
(99 %)
9 diff
(98.4 %id)
AU309834 neuroblastoma .a 1436 to 1953 546 to 29   AAA   518/518
(100 %)
0 diff
(100 %id)
NM_001153663.1   .b 1 to 1956 1 to 1956 exact RefSeq, AAA   1956/1956
(100 %)
0 diff
(100 %id)
BP352680   .b 123 to 710 1 to 588   tiling clone,   588/588
(100 %)
0 diff
(100 %id)
BI546785 brain, hippocampus .b 136 to 728 1 to 593       593/593
(100 %)
5 diff
(99.2 %id)
TI_44168655   .b 141 to 728 93 to 680       588/680
(86 %)
7 diff
(99.0 %id)
BP258724 heart .b 142 to 723 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BI602221 brain, hypothalamus .b 144 to 886 6 to 749   tiling clone,   744/749
(99 %)
15 diff
(98.0 %id)
TI_45209866   .b 144 to 886 86 to 829       744/829
(89 %)
15 diff
(98.2 %id)
BG330500 large cell carcinoma, lung .b 167 to 908 1 to 736   tiling clone,   736/887
(82 %)
28 diff
(96.9 %id)
NM_001153552.1   .c 1 to 1875 1 to 1875 exact RefSeq, AAA   1875/1875
(100 %)
0 diff
(100 %id)
DA695503   .c 28 to 585 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
DA696221   .c 120 to 690 2 to 573   capped   572/574
(99 %)
2 diff
(99.7 %id)
AF448857 brain .c 122 to 1864 13 to 1755   tiling clone,   1743/1755
(99 %)
6 diff
(99.7 %id)
AL533924 brain, fetal brain .c 125 to 924 1 to 800       800/800
(100 %)
0 diff
(100 %id)
BG722313 testis .c 135 to 869 1 to 735       735/739
(99 %)
10 diff
(98.7 %id)
BE971392 muscle (skeletal) .c 136 to 808 13 to 682       670/683
(98 %)
37 diff
(94.6 %id)
DB473103 hippocampus .c 140 to 599 1 to 460       460/460
(100 %)
0 diff
(100 %id)
CB961612 placenta, pre-eclamptic placenta .c 140 to 857 28 to 761       734/799
(91 %)
31 diff
(96.2 %id)
BQ277216 mixed (pool of 40 RNAs) .c 141 to 938 1 to 803       803/933
(86 %)
25 diff
(97.4 %id)
DB263394 uterus .c 141 to 734 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
BF207637 bladder, carcinoma, cell line .c 143 to 745 1 to 602       602/602
(100 %)
8 diff
(98.7 %id)
DA080121 cerebellum .c 146 to 701 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
AV656135 corresponding non cancerous liver tissue .c 148 to 493 1 to 346     Submitted on the opposite strand 346/346
(100 %)
4 diff
(98.9 %id)
DB471556 hippocampus .c 149 to 641 1 to 493       493/493
(100 %)
0 diff
(100 %id)
CD102312 Pooled-Skin .c 150 to 756 1 to 613       613/755
(81 %)
17 diff
(97.8 %id)
TI_57146473   .c 152 to 863 27 to 740       714/740
(96 %)
8 diff
(99.0 %id)
BI760964 pooled colon, kidney, stomach .c 153 to 863 1 to 713       713/713
(100 %)
2 diff
(99.8 %id)
BG674660 skin .c 171 to 1043 1 to 875       875/909
(96 %)
33 diff
(96.4 %id)
BE882059 leiomyosarcoma, uterus .c 176 to 872 1 to 688       688/859
(80 %)
21 diff
(97.6 %id)
BE567541 bladder, carcinoma, cell line .c 186 to 793 1 to 594       594/826
(71 %)
43 diff
(94.8 %id)
AL565317 brain, fetal brain .c 985 to 1831 849 to 6       844/849
(99 %)
0 diff
(100 %id)
NM_001153446.1   .d 1 to 1865 2 to 1866 exact RefSeq, AAA   1866/1866
(100 %)
0 diff
(100 %id)
DB204055 trachea .d 1 to 527 2 to 528 S109P tiling clone, capped   527/527
(100 %)
1 diff
(99.9 %id)
BP277525 Kidney .d 25 to 605 1 to 581 exact tiling clone,   581/581
(100 %)
9 diff
(98.5 %id)
NM_001153585.1   .e 1 to 1998 2 to 1999 exact RefSeq, AAA   1999/1999
(100 %)
0 diff
(100 %id)
DA625782 Kidney .e 1 to 547 2 to 548 exact tiling clone, capped   547/547
(100 %)
0 diff
(100 %id)
DN998209 breast cancer, Mammary gland (cancer tissue) .e 19 to 742 9 to 732 exact tiling clone,   724/732
(98 %)
6 diff
(99.2 %id)
DA587147 lung .e 23 to 586 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB205998 trachea .e 50 to 626 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
TI_57167102   .e 141 to 866 30 to 756 exact     727/756
(96 %)
9 diff
(98.9 %id)
BI834944 pooled pancreas and spleen .e 142 to 866 1 to 726 exact tiling clone,   726/726
(100 %)
3 diff
(99.6 %id)
DA963466 stomach .e 150 to 706 2 to 559 D45* capped   558/558
(100 %)
1 diff
(99.9 %id)
BP263546 small intestine .e 152 to 734 1 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
DA540447 lung .e 153 to 737 2 to 587 E52* capped   586/586
(100 %)
1 diff
(99.9 %id)
DA632118 Kidney .e 153 to 730 2 to 580 D45* capped   579/579
(100 %)
1 diff
(99.9 %id)
AK027797 placenta .f 1 to 1957 2 to 1958 F14L tiling clone, available from FLJ,   1958/1958
(100 %)
3 diff
(99.9 %id)
NM_032547.2   .f 1 to 1963 2 to 1964 exact RefSeq, AAA   1964/1964
(100 %)
0 diff
(100 %id)
DA830016 placenta .f 1 to 813 2 to 823 F14L capped   822/829
(99 %)
18 diff
(97.9 %id)
BP261670 small intestine .f 117 to 682 1 to 566 exact     566/566
(100 %)
5 diff
(99.2 %id)
BP221332 colon .f 120 to 688 1 to 568 exact     568/568
(100 %)
4 diff
(99.3 %id)
BP260823 small intestine .f 120 to 678 1 to 560 E52*     560/566
(98 %)
9 diff
(98.5 %id)
BP264013 small intestine .f 120 to 702 1 to 583 exact     583/583
(100 %)
2 diff
(99.7 %id)
DA041704 bladder .f 121 to 695 2 to 577 D45* capped   576/576
(100 %)
1 diff
(99.9 %id)
DA042247 bladder .f 121 to 681 2 to 563 D45* capped   562/563
(99 %)
2 diff
(99.7 %id)
DB242309 stomach, tumor tissue .f 121 to 699 2 to 581 D45* capped   580/580
(100 %)
1 diff
(99.9 %id)
DA429742 colon .f 124 to 641 2 to 520 D45* capped   519/520
(99 %)
2 diff
(99.7 %id)
BU786576 Pancreas, Purified pancreatic islet .f 142 to 785 1 to 644 exact     644/644
(100 %)
3 diff
(99.6 %id)
CA775982 Pancreas, Purified pancreatic islet .f 147 to 951 14 to 818   tiling clone,   805/818
(98 %)
6 diff
(99.3 %id)
CR737697 colon, colon tumor RER+ .f 155 to 900 1 to 746       746/746
(100 %)
0 diff
(100 %id)
AV722977 hypothalamus .f 202 to 851 17 to 666       650/689
(94 %)
10 diff
(98.6 %id)
BG197800   .f 208 to 1012 1 to 802       802/802
(100 %)
36 diff
(95.6 %id)
AW608979 pnet .f 211 to 629 417 to 2       419/422
(99 %)
6 diff
(98.6 %id)
BX345207 Placenta Cot 25-normalized .f 211 to 1012 1 to 801       801/872
(91 %)
37 diff
(95.8 %id)
AW965471   .f 212 to 876 1 to 672       672/672
(100 %)
18 diff
(97.4 %id)
CR608866 T cells (Jurkat cell line) .f 213 to 1927 1 to 1715       1715/1715
(100 %)
0 diff
(100 %id)
BX407917 T cells (Jurkat cell line) .f 213 to 1139 1 to 926       926/926
(100 %)
3 diff
(99.7 %id)
BX443633 T cells (Jurkat cell line) .f 213 to 726 1 to 516       516/520
(99 %)
11 diff
(97.9 %id)
DA572044 whole embryo, mainly body .f 217 to 863 2 to 644   capped   643/655
(98 %)
9 diff
(98.7 %id)
BG189664   .f 224 to 948 18 to 739       722/809
(89 %)
21 diff
(97.5 %id)
BP327333 prostata .f 251 to 832 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP327305 prostata .f 251 to 832 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA364930 subthalamic nucleus .f 269 to 823 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
R79007 placenta .f 296 to 617 1 to 327       327/406
(80 %)
6 diff
(98.6 %id)
BQ722072 sympathetic trunk .f 296 to 1070 1 to 782       782/917
(85 %)
16 diff
(98.3 %id)
BE762451 nervous_tumor .f 310 to 471 174 to 13       162/187
(86 %)
0 diff
(100 %id)
FN095833 breast carcinoma .f 331 to 397 67 to 1     Submitted on the opposite strand 67/68
(98 %)
0 diff
(100 %id)
AL133580 testis .f 345 to 1957 1 to 1613   tiling clone, available from DKFZ, AAA   1613/1613
(100 %)
0 diff
(100 %id)
BX408465 brain, fetal brain .f 364 to 1161 796 to 1       796/878
(90 %)
17 diff
(98.1 %id)
H85318 eye, retina .f 367 to 798 23 to 460       438/460
(95 %)
5 diff
(99.0 %id)
AA017285 eye, retina .f 367 to 789 10 to 440       431/456
(94 %)
11 diff
(97.6 %id)
BX388729 Placenta Cot 25-normalized .f 417 to 1320 906 to 1       906/906
(100 %)
19 diff
(98.0 %id)
CB999135 Pooled-Skin .f 444 to 1058 1 to 626       626/768
(81 %)
19 diff
(97.6 %id)
R24599 placenta .f 461 to 778 1 to 324       324/324
(100 %)
9 diff
(97.3 %id)
CR599465 Placenta Cot 25-normalized .f 478 to 1948 1 to 1471       1471/1471
(100 %)
0 diff
(100 %id)
AL549470 placenta, Placenta Cot 25-normalized .f 478 to 1357 1 to 879   fully sequenced,   879/879
(100 %)
1 diff
(99.9 %id)
BX453782 adult brain, brain .f 492 to 1404 914 to 1       914/969
(94 %)
57 diff
(94.2 %id)
CF139591 CNCAP(3)T-225 cell line, Prostate .f 505 to 1067 1 to 563       563/563
(100 %)
5 diff
(99.2 %id)
DA732054   .f 506 to 990 2 to 485   capped   484/486
(99 %)
9 diff
(98.2 %id)
TI_154169828   .f 512 to 1369 87 to 933       847/848
(99 %)
45 diff
(94.7 %id)
BP421153 small intestine .f 534 to 1033 1 to 501     Submitted on the opposite strand 501/501
(100 %)
2 diff
(99.7 %id)
BX408413 placenta .f 554 to 1405 853 to 1       853/877
(97 %)
48 diff
(94.6 %id)
FN050580 breast carcinoma .f 575 to 681 108 to 1     Submitted on the opposite strand 108/108
(100 %)
1 diff
(99.1 %id)
DR423816 eye, Pterygium .f 579 to 1332 8 to 761       754/761
(99 %)
6 diff
(99.3 %id)
BX410241 adult brain, brain .f 591 to 1440 1 to 848       848/939
(90 %)
16 diff
(98.3 %id)
AA843907 parathyroid gland, parathyroid tumor .f 591 to 1116 1 to 526     Submitted on the opposite strand 526/526
(100 %)
0 diff
(100 %id)
BM469564 lymph, lymphoma, cell line .f 625 to 1350 1 to 737       737/967
(76 %)
15 diff
(98.5 %id)
BX429436 T cells (Jurkat cell line) .f 626 to 1512 1 to 883       883/886
(99 %)
25 diff
(97.2 %id)
BE878693 large cell carcinoma, undifferentiated, lung .f 628 to 1297 1 to 665       665/755
(88 %)
16 diff
(97.9 %id)
BQ425209 leiomyosarcoma, uterus .f 629 to 1463 24 to 858       835/858
(97 %)
6 diff
(99.4 %id)
AV703746 adrenal gland .f 636 to 1214 1 to 581       581/581
(100 %)
7 diff
(98.8 %id)
BG432550 Kidney .f 637 to 1127 1 to 494       494/794
(62 %)
12 diff
(98.5 %id)
T63676 lung .f 643 to 838 1 to 199       199/199
(100 %)
3 diff
(98.5 %id)
FN155620 breast carcinoma .f 654 to 755 1 to 102       102/102
(100 %)
0 diff
(100 %id)
BU858384 mixed (pool of 40 RNAs) .f 672 to 1395 1 to 734       734/808
(90 %)
22 diff
(97.3 %id)
CB216183 normal endometrium, mid-secretory phase,cycle day 23, uterus .f 673 to 1268 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
FN167026 breast carcinoma .f 679 to 774 98 to 1     Submitted on the opposite strand 98/108
(90 %)
2 diff
(98.2 %id)
FN121809 breast carcinoma .f 680 to 762 1 to 80       80/81
(98 %)
4 diff
(95.1 %id)
BF033541 adenocarcinoma, ovary .f 680 to 1385 1 to 705       705/868
(81 %)
23 diff
(97.4 %id)
BX388584 Placenta Cot 25-normalized .f 687 to 1529 1 to 840       840/840
(100 %)
6 diff
(99.3 %id)
CN367658 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 744 to 1418 1 to 676       676/676
(100 %)
1 diff
(99.9 %id)
BF687718 brain, glioblastoma .f 745 to 1436 1 to 682       682/719
(94 %)
23 diff
(96.9 %id)
BP209446 cerebellum .f 756 to 1337 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP209555 cerebellum .f 756 to 1337 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BX368051 Placenta Cot 25-normalized .f 756 to 1544 811 to 36       776/848
(91 %)
0 diff
(100 %id)
FN131447 breast carcinoma .f 763 to 872 108 to 1     Submitted on the opposite strand 108/114
(94 %)
6 diff
(94.8 %id)
CN367657 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .f 768 to 1151 1 to 385       385/385
(100 %)
3 diff
(99.3 %id)
BG533030 embryonal carcinoma, testis .f 773 to 1605 1 to 829       829/901
(92 %)
32 diff
(96.5 %id)
BX429406 brain, fetal brain .f 774 to 1560 1 to 783       783/857
(91 %)
13 diff
(98.5 %id)
AW131478 brain, medulloblastoma .f 780 to 1320 1 to 541     Submitted on the opposite strand 541/541
(100 %)
0 diff
(100 %id)
AA490529 germinal center B cell .f 790 to 1224 1 to 435       435/435
(100 %)
1 diff
(99.8 %id)
CA942929 Pancreas, Purified pancreatic islet .f 796 to 1406 11 to 621       611/621
(98 %)
6 diff
(99.1 %id)
BX408218 brain, fetal brain .f 804 to 1661 1 to 852       852/852
(100 %)
26 diff
(97.0 %id)
CB122366 Liver .f 828 to 1428 1 to 601       601/601
(100 %)
0 diff
(100 %id)
BP324988 Pancreas .f 828 to 1388 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
BU951600 Pancreas, Purified pancreatic islet .f 834 to 1430 32 to 628   fully sequenced,   597/628
(95 %)
6 diff
(99.1 %id)
AW444825   .f 839 to 1171 351 to 18   AAA   334/334
(100 %)
1 diff
(99.8 %id)
BM800886 melanotic melanoma, skin .f 848 to 1418 1 to 571       571/1086
(52 %)
20 diff
(98.2 %id)
BX442407 brain, fetal brain .f 872 to 1940 1060 to 1       1060/1099
(96 %)
0 diff
(100 %id)
BM740998 Ascites, stomach .f 885 to 1486 1 to 602       602/602
(100 %)
0 diff
(100 %id)
AA043390 uterus .f 895 to 1345 1 to 451       451/453
(99 %)
1 diff
(99.8 %id)
BX335770 Placenta Cot 25-normalized .f 903 to 1924 1010 to 1       1010/1015
(99 %)
0 diff
(100 %id)
BX429859 brain, fetal brain .f 919 to 1672 1 to 752       752/794
(94 %)
31 diff
(96.1 %id)
BQ777107 Pancreas, Purified pancreatic islet .f 921 to 1527 1 to 607   fully sequenced,   607/607
(100 %)
0 diff
(100 %id)
BU951736 Pancreas, Purified pancreatic islet .f 921 to 1302 1 to 382       382/382
(100 %)
2 diff
(99.5 %id)
BX432473 brain, fetal brain .f 948 to 1945 995 to 1       995/1002
(99 %)
23 diff
(97.8 %id)
AV716598   .f 952 to 1545 1 to 594       594/594
(100 %)
5 diff
(99.2 %id)
BM903934 eye, retinoblastoma .f 954 to 1449 1 to 501       501/1370
(36 %)
20 diff
(98.6 %id)
BX458266 placenta .f 958 to 1945 989 to 1       989/990
(99 %)
18 diff
(98.2 %id)
BX450690 brain, fetal brain .f 959 to 1837 1 to 886       886/888
(99 %)
45 diff
(95.0 %id)
BX407916 T cells (Jurkat cell line) .f 962 to 1927 966 to 1       966/966
(100 %)
0 diff
(100 %id)
BP332300 renal proximal tubule .f 971 to 1550 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
BX428918 brain, fetal brain .f 987 to 1928 944 to 1       944/948
(99 %)
7 diff
(99.3 %id)
TI_149297829   .f 993 to 1962 1052 to 96   AAA   957/982
(97 %)
18 diff
(98.2 %id)
FN065113 breast carcinoma .f 995 to 1081 1 to 89       89/89
(100 %)
4 diff
(95.6 %id)
BX429133 adult brain, brain .f 997 to 1929 931 to 4       928/942
(98 %)
0 diff
(100 %id)
BG531244 embryonal carcinoma, testis .f 1053 to 1753 1 to 699       699/702
(99 %)
5 diff
(99.3 %id)
BE888537 leiomyosarcoma, uterus .f 1058 to 1815 1 to 748       748/854
(87 %)
24 diff
(97.2 %id)
BX436083 T cells (Jurkat cell line) .f 1059 to 1956 903 to 1       903/903
(100 %)
32 diff
(96.5 %id)
EC490652 Prostate .f 1069 to 1183 112 to 1       112/112
(100 %)
3 diff
(97.4 %id)
BX352096 Placenta Cot 25-normalized .f 1071 to 1956 887 to 1       887/911
(97 %)
11 diff
(98.8 %id)
N47156 multiple sclerosis lesions .f 1071 to 1328 1 to 265       265/265
(100 %)
10 diff
(96.3 %id)
TI_149299009   .f 1073 to 1957 951 to 84   AAA   868/964
(90 %)
24 diff
(97.6 %id)
BF215482 brain, glioblastoma .f 1080 to 1787 1 to 695       695/861
(80 %)
16 diff
(98.2 %id)
BM835322 stomach .f 1090 to 1607 1 to 518       518/518
(100 %)
0 diff
(100 %id)
BX455249 brain, fetal brain .f 1092 to 1933 852 to 3       850/906
(93 %)
0 diff
(100 %id)
BG562702 Liver .f 1095 to 1705 1 to 608       608/608
(100 %)
3 diff
(99.6 %id)
FN052448 breast carcinoma .f 1100 to 1191 1 to 93       93/93
(100 %)
2 diff
(97.9 %id)
CN367655 embryonic stem cells, DMSO-treated H9 cellline .f 1121 to 1915 1 to 795       795/795
(100 %)
0 diff
(100 %id)
AV753593 Pituitary .f 1121 to 1699 1 to 576       576/662
(87 %)
29 diff
(95.7 %id)
BM846011 lymph node, stomach .f 1124 to 1597 1 to 472       472/472
(100 %)
3 diff
(99.4 %id)
BQ286318 Pancreas, Purified pancreatic islet .f 1126 to 1686 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BE167778 head_neck .f 1129 to 1553 11 to 433       423/433
(97 %)
11 diff
(97.5 %id)
BM738741 Ascites, stomach .f 1133 to 1655 1 to 523       523/523
(100 %)
0 diff
(100 %id)
AV752140 Pituitary .f 1143 to 1769 1 to 625       625/778
(80 %)
23 diff
(97.1 %id)
BM704308 eye, Retina Foveal and Macular .f 1143 to 1518 1 to 376   fully sequenced,   376/376
(100 %)
0 diff
(100 %id)
FN091079 breast carcinoma .f 1145 to 1261 117 to 1     Submitted on the opposite strand 117/124
(94 %)
1 diff
(99.2 %id)
TI_154048036   .f 1146 to 1959 890 to 84   AAA   807/978
(82 %)
14 diff
(98.6 %id)
CK825793 Pancreas, Purified pancreatic islet .f 1157 to 1733 1 to 577     Submitted on the opposite strand 577/577
(100 %)
0 diff
(100 %id)
FN165844 breast carcinoma .f 1161 to 1287 127 to 1     Submitted on the opposite strand 127/127
(100 %)
0 diff
(100 %id)
BF216598 brain, glioblastoma .f 1171 to 1764 1 to 589       589/790
(74 %)
18 diff
(97.8 %id)
BU189352 melanotic melanoma, skin .f 1190 to 1712 1 to 533       533/1140
(46 %)
24 diff
(97.9 %id)
TI_154124784   .f 1192 to 1959 850 to 88   AAA   763/949
(80 %)
15 diff
(98.5 %id)
TI_159724117   .f 1192 to 1957 842 to 79   AAA   764/997
(76 %)
10 diff
(99.0 %id)
TI_149306884   .f 1198 to 1957 851 to 92   AAA   760/943
(80 %)
4 diff
(99.6 %id)
BQ338189 nervous_normal .f 1216 to 1584 7 to 372       366/372
(98 %)
6 diff
(98.4 %id)
BQ338082 nervous_normal .f 1227 to 1684 1 to 458       458/458
(100 %)
15 diff
(96.8 %id)
BU684889 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 1240 to 1957 733 to 17   AAA   717/717
(100 %)
1 diff
(99.9 %id)
BU620183 cell lines, Chondrosarcoma .f 1244 to 1957 732 to 19   AAA   714/714
(100 %)
0 diff
(100 %id)
BM982833 lung, Primary Lung Cystic Fibrosis EpithelialCells .f 1271 to 1962 710 to 19   AAA   692/692
(100 %)
0 diff
(100 %id)
BQ338284 nervous_normal .f 1281 to 1658 399 to 23       377/399
(94 %)
0 diff
(100 %id)
BX385935 Placenta Cot 25-normalized .f 1282 to 1928 646 to 1       646/646
(100 %)
10 diff
(98.5 %id)
BU620501 cell lines, Chondrosarcoma .f 1286 to 1957 688 to 19   AAA   670/670
(100 %)
2 diff
(99.8 %id)
CA415874 Chondrosarcoma Cell line .f 1287 to 1959 687 to 17   AAA   671/671
(100 %)
2 diff
(99.8 %id)
TI_149282268   .f 1288 to 1959 751 to 81   AAA   671/1095
(61 %)
9 diff
(99.2 %id)
BE939605 uterus .f 1292 to 1679 403 to 16       388/409
(94 %)
0 diff
(100 %id)
BF093849 uterus .f 1297 to 1684 1 to 386       386/386
(100 %)
6 diff
(98.5 %id)
BQ377627 uterus .f 1304 to 1684 5 to 380       376/380
(98 %)
6 diff
(98.5 %id)
BU608814 Human Lung Epithelial cells, lung .f 1306 to 1957 668 to 17   AAA   652/652
(100 %)
0 diff
(100 %id)
BQ338081 nervous_normal .f 1307 to 1661 362 to 1       362/363
(99 %)
32 diff
(91.2 %id)
BU679867 lung, Primary Lung Epithelial Cells .f 1308 to 1959 667 to 17   AAA   651/652
(99 %)
2 diff
(99.7 %id)
AL573668 placenta, Placenta Cot 25-normalized .f 1327 to 1948 621 to 1   fully sequenced,   621/621
(100 %)
6 diff
(99.1 %id)
BU784835 Pancreas, Purified pancreatic islet .f 1334 to 1956 623 to 1       623/623
(100 %)
0 diff
(100 %id)
BX339859 Placenta Cot 25-normalized .f 1338 to 1927 592 to 1       592/592
(100 %)
4 diff
(99.4 %id)
BF229896 colon_est .f 1341 to 1498 167 to 10       158/167
(94 %)
0 diff
(100 %id)
AV724404 hypothalamus .f 1348 to 1702 1 to 351       351/377
(93 %)
3 diff
(99.3 %id)
AW976418   .f 1353 to 1956 600 to 1     Submitted on the opposite strand 600/608
(98 %)
10 diff
(98.4 %id)
CN367659 embryonic stem cells, DMSO-treated H9 cellline .f 1359 to 1794 12 to 447       436/447
(97 %)
6 diff
(98.7 %id)
CA775697 Pancreas, Purified pancreatic islet .f 1367 to 1935 569 to 1       569/569
(100 %)
0 diff
(100 %id)
DB375004 placenta .f 1383 to 1957 570 to 2       569/576
(98 %)
0 diff
(100 %id)
AI057577 parathyroid gland, parathyroid tumor .f 1389 to 1957 586 to 18   AAA   569/569
(100 %)
0 diff
(100 %id)
FN156800 breast carcinoma .f 1393 to 1502 109 to 1     Submitted on the opposite strand 109/109
(100 %)
3 diff
(97.3 %id)
BU951340 Pancreas, Purified pancreatic islet .f 1400 to 1959 560 to 1   fully sequenced,   560/560
(100 %)
2 diff
(99.7 %id)
AW190360 adenocarcinoma, Pancreas .f 1405 to 1740 337 to 1       337/337
(100 %)
1 diff
(99.8 %id)
BX109351 whole brain .f 1416 to 1957 556 to 15   AAA   542/542
(100 %)
0 diff
(100 %id)
FN127451 breast carcinoma .f 1416 to 1521 1 to 102       102/103
(99 %)
5 diff
(95.2 %id)
BJ997030 hepatoblastoma .f 1425 to 1928 504 to 1       504/504
(100 %)
0 diff
(100 %id)
AW150870 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 1425 to 1959 535 to 1       535/535
(100 %)
0 diff
(100 %id)
DB358997 whole embryo, mainly body .f 1430 to 1957 528 to 1       528/528
(100 %)
13 diff
(97.6 %id)
DB569889 hypothalamus .f 1432 to 1957 1 to 526     Submitted on the opposite strand 526/526
(100 %)
2 diff
(99.7 %id)
CK825794 Pancreas, Purified pancreatic islet .f 1450 to 1961 514 to 3     Submitted on the opposite strand 512/514
(99 %)
0 diff
(100 %id)
DB551467 hippocampus .f 1451 to 1957 1 to 507     Submitted on the opposite strand 507/507
(100 %)
2 diff
(99.7 %id)
AI703497 carcinoid, lung .f 1461 to 1960 502 to 3       500/502
(99 %)
0 diff
(100 %id)
BP383890 pancreatic islet .f 1463 to 1956 1 to 494     Submitted on the opposite strand 494/499
(98 %)
1 diff
(99.8 %id)
FN130269 breast carcinoma .f 1471 to 1564 1 to 94       94/95
(98 %)
1 diff
(99.0 %id)
BE939596 uterus .f 1472 to 1684 1 to 212       212/212
(100 %)
2 diff
(99.1 %id)
BE138908 adenocarcinoma, Pancreas .f 1472 to 1957 486 to 1       486/486
(100 %)
0 diff
(100 %id)
BQ269670 Pancreas, Purified pancreatic islet .f 1473 to 1961 495 to 7       489/495
(98 %)
0 diff
(100 %id)
DB576868 hypothalamus .f 1474 to 1957 1 to 484     Submitted on the opposite strand 484/484
(100 %)
0 diff
(100 %id)
T63352 lung .f 1474 to 1926 462 to 1       462/466
(99 %)
16 diff
(96.6 %id)
EC517722 Prostate .f 1475 to 1583 1 to 109       109/109
(100 %)
5 diff
(95.5 %id)
BG151522 sciatic nerve .f 1475 to 1963 501 to 13   tiling clone, AAA   489/489
(100 %)
0 diff
(100 %id)
DB541860 hippocampus .f 1477 to 1957 1 to 481     Submitted on the opposite strand 481/481
(100 %)
1 diff
(99.8 %id)
DB524231 testis .f 1479 to 1959 1 to 481     Submitted on the opposite strand 481/481
(100 %)
0 diff
(100 %id)
DB570650 hypothalamus .f 1480 to 1957 1 to 478     Submitted on the opposite strand 478/478
(100 %)
0 diff
(100 %id)
DB540289 hippocampus .f 1482 to 1957 1 to 476     Submitted on the opposite strand 476/477
(99 %)
2 diff
(99.6 %id)
DB552656 hippocampus .f 1484 to 1960 1 to 477     Submitted on the opposite strand 477/478
(99 %)
2 diff
(99.6 %id)
DB543258 hippocampus .f 1485 to 1957 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
DB548087 hippocampus .f 1485 to 1957 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
DB548070 hippocampus .f 1487 to 1957 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
AI291412 carcinoid, lung .f 1488 to 1956 469 to 1       469/469
(100 %)
0 diff
(100 %id)
BM671514 eye, Retina Foveal and Macular .f 1488 to 1961 492 to 19   fully sequenced, AAA   474/474
(100 %)
0 diff
(100 %id)
AI475943 colon, moderately-differentiated adenocarcinoma .f 1490 to 1957 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AI628348 serous papillary carcinoma, high grade, 2pooled tumors, uterus .f 1490 to 1958 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AI912447 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 1490 to 1958 469 to 1       469/469
(100 %)
0 diff
(100 %id)
BE350759 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .f 1491 to 1957 478 to 12   AAA   467/467
(100 %)
0 diff
(100 %id)
DB552128 hippocampus .f 1493 to 1957 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
DA223780 brain .f 1494 to 1716 2 to 224   capped   223/223
(100 %)
0 diff
(100 %id)
DB552448 hippocampus .f 1495 to 1957 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
BQ778214 Pancreas, Purified pancreatic islet .f 1497 to 1957 461 to 1   fully sequenced,   461/461
(100 %)
0 diff
(100 %id)
AA587471 breast .f 1503 to 1957 455 to 1       455/455
(100 %)
0 diff
(100 %id)
FN054733 breast carcinoma .f 1510 to 1616 1 to 107       107/107
(100 %)
0 diff
(100 %id)
DB531536 hippocampus .f 1514 to 1957 1 to 444     Submitted on the opposite strand 444/444
(100 %)
0 diff
(100 %id)
DB535028 hippocampus .f 1516 to 1957 1 to 442     Submitted on the opposite strand 442/442
(100 %)
0 diff
(100 %id)
DB534903 hippocampus .f 1517 to 1959 1 to 443     Submitted on the opposite strand 443/443
(100 %)
0 diff
(100 %id)
DB546254 hippocampus .f 1518 to 1955 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
AA043391 uterus .f 1523 to 1957 442 to 1       442/444
(99 %)
11 diff
(97.6 %id)
DB526270 testis .f 1530 to 1959 1 to 431     Submitted on the opposite strand 431/431
(100 %)
1 diff
(99.8 %id)
FN106608 breast carcinoma .f 1534 to 1638 1 to 104       104/105
(99 %)
2 diff
(98.1 %id)
DB525971 testis .f 1538 to 1957 1 to 420     Submitted on the opposite strand 420/420
(100 %)
0 diff
(100 %id)
AI342758 carcinoid, lung .f 1539 to 1958 420 to 1       420/420
(100 %)
0 diff
(100 %id)
AV733199 pheochromocytoma .f 1543 to 1957 1 to 415   AAA   415/415
(100 %)
0 diff
(100 %id)
AI123498 parathyroid gland, parathyroid tumor .f 1543 to 1959 426 to 10       417/426
(97 %)
0 diff
(100 %id)
N46837 multiple sclerosis lesions .f 1544 to 1958 416 to 2       415/416
(99 %)
0 diff
(100 %id)
DB533925 hippocampus .f 1546 to 1955 1 to 411     Submitted on the opposite strand 411/413
(99 %)
7 diff
(98.4 %id)
BE242417 leukopheresis .f 1549 to 1953 407 to 3       405/407
(99 %)
0 diff
(100 %id)
FN092837 breast carcinoma .f 1582 to 1668 88 to 3     Submitted on the opposite strand 86/88
(97 %)
0 diff
(100 %id)
AI273073 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 1585 to 1961 377 to 1       377/377
(100 %)
0 diff
(100 %id)
AA588544 colon, colon tumor RER+ .f 1587 to 1961 402 to 28   AAA   375/375
(100 %)
0 diff
(100 %id)
FN094993 breast carcinoma .f 1590 to 1688 99 to 1     Submitted on the opposite strand 99/110
(90 %)
1 diff
(99.1 %id)
CA944670 Human Lung Epithelial cells, lung .f 1590 to 1958 13 to 381   AAA Submitted on the opposite strand 369/419
(88 %)
4 diff
(99.1 %id)
R78908 placenta .f 1598 to 1944 360 to 2       359/362
(99 %)
0 diff
(100 %id)
TI_149306579   .f 1601 to 1957 450 to 94   AAA   357/357
(100 %)
1 diff
(99.8 %id)
AI473201 Kidney .f 1606 to 1961 371 to 16   AAA   356/356
(100 %)
0 diff
(100 %id)
AI440270 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .f 1611 to 1957 360 to 14   AAA   347/347
(100 %)
0 diff
(100 %id)
AA890260 parathyroid gland, parathyroid tumor .f 1622 to 1957 346 to 11   AAA   336/336
(100 %)
0 diff
(100 %id)
BU686595 lung, Primary Lung Epithelial Cells .f 1622 to 1957 352 to 17   AAA   336/336
(100 %)
0 diff
(100 %id)
BU951468 Pancreas, Purified pancreatic islet .f 1624 to 1958 335 to 2       334/335
(99 %)
0 diff
(100 %id)
AA017249 eye, retina .f 1629 to 1959 337 to 1       337/410
(82 %)
10 diff
(97.6 %id)
CB135409 Liver .f 1629 to 1959 355 to 23   AAA Submitted on the opposite strand 333/333
(100 %)
2 diff
(99.4 %id)
AW235970 Kidney .f 1630 to 1957 340 to 13   AAA   328/328
(100 %)
0 diff
(100 %id)
AI245588 Kidney .f 1644 to 1958 315 to 1       315/315
(100 %)
0 diff
(100 %id)
AA604634 adrenal adenoma, adrenal gland .f 1645 to 1957 345 to 33   AAA   313/313
(100 %)
0 diff
(100 %id)
AA853389 Bone, Hip .f 1650 to 1939 297 to 8       290/297
(97 %)
0 diff
(100 %id)
R24501 placenta .f 1655 to 1924 280 to 1       280/336
(83 %)
19 diff
(94.4 %id)
FN167761 breast carcinoma .f 1682 to 1769 1 to 88       88/88
(100 %)
3 diff
(96.6 %id)
FN168035 breast carcinoma .f 1682 to 1769 1 to 88       88/88
(100 %)
5 diff
(94.4 %id)
AA732018 germinal center B cell .f 1686 to 1957 287 to 16   AAA   272/272
(100 %)
0 diff
(100 %id)
H85561 eye, retina .f 1692 to 1943 253 to 1       253/253
(100 %)
2 diff
(99.3 %id)
AA370012 Prostate .f 1744 to 1961 224 to 1     Submitted on the opposite strand 224/224
(100 %)
6 diff
(97.4 %id)
C00377   .f 1748 to 1957 1 to 210       210/210
(100 %)
0 diff
(100 %id)
BY999151   .f 1748 to 1959 1 to 212     Submitted on the opposite strand 212/215
(98 %)
2 diff
(99.1 %id)
BY999406   .f 1748 to 1961 1 to 214     Submitted on the opposite strand 214/217
(98 %)
2 diff
(99.1 %id)
BP385363 pancreatic islet .f 1782 to 1949 1 to 168     Submitted on the opposite strand 168/168
(100 %)
0 diff
(100 %id)
CA942688 Pancreas, Purified pancreatic islet .f 1815 to 1956 142 to 1       142/142
(100 %)
0 diff
(100 %id)
NM_001153635.1   .g 1 to 1862 2 to 1863 exact RefSeq, AAA   1863/1863
(100 %)
0 diff
(100 %id)
BG538732 lung .g 3 to 505 1 to 508 E85G E86R N87K L88S K89E ... tiling clone,   508/739
(68 %)
11 diff
(98.6 %id)
BC062684 lung .g 4 to 1457 5 to 1458 exact tiling clone, available from MGC, AAA   1454/1454
(100 %)
1 diff
(100.0 %id)
EL736613 mixed .g 45 to 409 1 to 365       365/538
(67 %)
1 diff
(99.9 %id)
TI_1948233135   .g 45 to 409 133 to 497       365/1466
(24 %)
11 diff
(99.3 %id)
TI_1948233286   .g 45 to 409 134 to 498       365/791
(46 %)
8 diff
(99.0 %id)
NM_001153690.1   .h 1 to 1914 2 to 1915 exact RefSeq, AAA   1915/1915
(100 %)
0 diff
(100 %id)
FN090089 breast carcinoma .h 117 to 225 1 to 110   tiling clone,   110/111
(99 %)
2 diff
(98.2 %id)
DA046444 bladder .h 155 to 728 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
AA314393 colon .h 164 to 680 1 to 517 G71X     517/517
(100 %)
0 diff
(100 %id)
BE065271 breast .h 215 to 722 509 to 5     Submitted on the opposite strand 505/523
(96 %)
0 diff
(100 %id)
BQ222692 leiomyosarcoma, uterus .h 258 to 1180 1 to 936   tiling clone,   936/980
(95 %)
19 diff
(98.1 %id)
BM021065 Islets of Langerhans, Pancreas .i 1 to 520 522 to -1 R3G tiling clone,   522/522
(100 %)
3 diff
(99.5 %id)
BM021848 Islets of Langerhans, Pancreas .i 14 to 520 507 to 1       507/507
(100 %)
3 diff
(99.5 %id)
BG613633 embryonal carcinoma, testis .j 1 to 833 1 to 832 exact tiling clone,   832/840
(99 %)
38 diff
(95.5 %id)
BU569852 testis .k 1 to 601 1 to 607 R22K L23T I24Y N25* tiling clone,   607/797
(76 %)
12 diff
(98.5 %id)
AK092794 small intestine .l-u 1 to 2718 2 to 2718 exact tiling clone, available from FLJ,   2718/2718
(100 %)
4 diff
(99.9 %id)
DA921761 small intestine .l-u 1 to 581 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DB331950 small intestine .l-u 2174 to 2718 545 to 1       545/545
(100 %)
1 diff
(99.9 %id)
BU952299 Pancreas, Purified pancreatic islet .m 1 to 668 1 to 668 exact tiling clone,   668/668
(100 %)
3 diff
(99.6 %id)
AI538173 Kidney .m 552 to 1276 725 to 1   tiling clone,   725/729
(99 %)
9 diff
(98.8 %id)
AI800272 Kidney .m 575 to 1276 701 to 1   tiling clone,   701/701
(100 %)
12 diff
(98.3 %id)
BU952037 Pancreas, Purified pancreatic islet .m 825 to 1276 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
CD239342 Pituitary .n 1 to 713 9 to 721 exact tiling clone,   721/721
(100 %)
18 diff
(97.6 %id)
BM989401 Fibrosarcoma .o-u 1 to 674 691 to 19 F32X tiling clone, AAA   673/673
(100 %)
5 diff
(99.3 %id)
BP277236 Kidney .p 1 to 572 9 to 581 exact tiling clone,   581/581
(100 %)
5 diff
(99.2 %id)
DA013415 adrenal gland .q-u 1 to 562 2 to 563 exact tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DA648579   .r 1 to 533 2 to 535 exact tiling clone, capped   534/534
(100 %)
4 diff
(99.3 %id)
DA659355   .r 19 to 540 2 to 529 exact tiling clone, capped   528/539
(97 %)
12 diff
(97.8 %id)
TI_154000777   .s 1 to 520 615 to 96 V2L A5D L11M G18V W19C tiling clone, AAA   520/923
(56 %)
14 diff
(98.5 %id)
CA432918 mixed .s 60 to 520 479 to 19   tiling clone, AAA   461/461
(100 %)
0 diff
(100 %id)
BM987275 mixed .s 70 to 520 469 to 19   AAA   451/451
(100 %)
0 diff
(100 %id)
BF511272   .t 1 to 483 18 to 500 exact tiling clone, Submitted on the opposite strand 483/493
(97 %)
3 diff
(99.4 %id)
BG197619   .t 235 to 422 28 to 212 E2A V8A A28T tiling clone,   185/212
(87 %)
6 diff
(97.2 %id)
BX449938 brain, fetal brain Gene SCOC, variant not shown         Suspected internal deletion, this clone was ignored    
BF028843 bladder, carcinoma, cell line Gene SCOC, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o-u, .p, .q-u, .r, .s, .t Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI