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Gene SCNN1AandTNFRSF1ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
717 representative clones for gene SCNN1AandTNFRSF1A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB231170 trachea .a 1 to 568 2 to 569   tiling clone, capped   568/573
(99 %)
2 diff
(99.7 %id)
DB213865 trachea .a 37 to 535 2 to 500   tiling clone, capped   499/499
(100 %)
0 diff
(100 %id)
AI354348 esophagus, squamous cell carcinoma .a 43 to 332 290 to 1       290/290
(100 %)
1 diff
(99.7 %id)
DA455064 tongue, tumor tissue .a 87 to 650 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB220867 trachea .a 87 to 578 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
DB228448 trachea .a 87 to 585 2 to 501   capped   500/500
(100 %)
1 diff
(99.8 %id)
DB241153 trachea .a 87 to 677 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB163121 thymus .a 104 to 679 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB223156 trachea .a 104 to 552 2 to 451   capped   450/451
(99 %)
3 diff
(99.4 %id)
DB238700 trachea .a 105 to 665 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA457767 tongue, tumor tissue .a 108 to 675 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB216055 trachea .a 108 to 580 2 to 474   capped   473/474
(99 %)
1 diff
(99.8 %id)
DB217090 trachea .a 108 to 518 2 to 412   capped   411/413
(99 %)
1 diff
(99.8 %id)
DB234903 trachea .a 108 to 661 2 to 555   capped   554/554
(100 %)
3 diff
(99.5 %id)
DB240457 trachea .a 108 to 699 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
AY365119   .a 111 to 913 1 to 803       803/803
(100 %)
0 diff
(100 %id)
DB222170 trachea .a 113 to 693 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DB223769 trachea .a 113 to 579 2 to 468   capped   467/467
(100 %)
1 diff
(99.8 %id)
DA039852 bladder .a 114 to 590 2 to 479   capped   478/478
(100 %)
1 diff
(99.8 %id)
DA424862 colon .a 114 to 675 2 to 563   capped   562/563
(99 %)
2 diff
(99.7 %id)
DA450472 tongue, tumor tissue .a 114 to 690 2 to 580   capped   579/579
(100 %)
4 diff
(99.4 %id)
DA592807 lung .a 114 to 661 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA594272 lung .a 114 to 676 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB002103 breast, tumor tissue .a 114 to 663 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB212376 trachea .a 114 to 593 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DB216609 trachea .a 114 to 575 2 to 464   capped   463/466
(99 %)
2 diff
(99.6 %id)
DB218955 trachea .a 114 to 586 2 to 474   capped   473/473
(100 %)
2 diff
(99.6 %id)
DB220448 trachea .a 114 to 580 2 to 468   capped   467/474
(98 %)
1 diff
(99.8 %id)
DB224756 trachea .a 114 to 579 2 to 467   capped   466/467
(99 %)
2 diff
(99.6 %id)
DB226127 trachea .a 114 to 698 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DB227489 trachea .a 114 to 579 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DB228124 trachea .a 114 to 606 2 to 494   capped   493/493
(100 %)
1 diff
(99.8 %id)
DB228546 trachea .a 114 to 579 2 to 467   capped   466/466
(100 %)
0 diff
(100 %id)
DB231130 trachea .a 114 to 586 2 to 475   capped   474/474
(100 %)
1 diff
(99.8 %id)
DB235099 trachea .a 114 to 667 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB235415 trachea .a 114 to 702 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB238532 trachea .a 114 to 713 2 to 600   capped   599/599
(100 %)
2 diff
(99.7 %id)
DB239490 trachea .a 114 to 692 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB240672 trachea .a 114 to 702 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB282907 uterus .a 114 to 675 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA462168 tongue, tumor tissue .a 119 to 578 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DA626837 Kidney .a 119 to 677 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB230975 trachea .a 119 to 622 2 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
DA764051 tongue .a 126 to 661 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
CN283166 embryonic stem cells, cell lines H1, H7, andH9 .a 131 to 325 1 to 195       195/195
(100 %)
1 diff
(99.5 %id)
DB220857 trachea .a 162 to 730 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DB234219 trachea .a 170 to 577 2 to 409   capped   408/408
(100 %)
0 diff
(100 %id)
DA312822 hippocampus .a 174 to 739 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA315545 hippocampus .a 174 to 721 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DB229013 trachea .a 174 to 764 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB238708 trachea .a 174 to 748 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
DB212850 trachea .a 185 to 551 2 to 368   capped   367/367
(100 %)
1 diff
(99.8 %id)
DB224140 trachea .a 185 to 599 2 to 416   capped   415/415
(100 %)
2 diff
(99.6 %id)
DB226041 trachea .a 191 to 668 2 to 480   capped   479/479
(100 %)
2 diff
(99.6 %id)
DB236174 trachea .a 191 to 661 2 to 472   capped   471/471
(100 %)
1 diff
(99.8 %id)
DB240320 trachea .a 191 to 767 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA403961 thalamus .a 202 to 750 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB212667 trachea .a 202 to 759 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB236644 trachea .a 202 to 661 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DB241007 trachea .a 204 to 789 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB232741 trachea .a 288 to 836 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA622287 Kidney .a 291 to 845 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
DA322832 hippocampus .a 317 to 810 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA330939 hippocampus .a 317 to 865 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB062924 testis .a 330 to 868 2 to 540   capped   539/539
(100 %)
4 diff
(99.3 %id)
DB219924 trachea .a 333 to 872 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DB245920 uterus, tumor tissue .a 333 to 883 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA407060 thalamus .a 334 to 875 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DB063605 testis .a 334 to 875 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
AK172792   .a 338 to 3813 1 to 3478 M141T T228H L229S V230R A231G ... available from FLJ, AAA   3478/3478
(100 %)
5 diff
(99.9 %id)
NM_001159576.1   .a 339 to 3817 1 to 3479 exact RefSeq, AAA   3479/3479
(100 %)
0 diff
(100 %id)
DB276197 uterus .a 341 to 884 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA410557 thalamus .a 342 to 899 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA043892 bladder .a 344 to 910 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
CK000143 mixed .a 344 to 1124 1 to 780       780/782
(99 %)
10 diff
(98.8 %id)
BI489936 pooled brain, lung, testis .a 355 to 869 1 to 519       519/816
(63 %)
5 diff
(99.4 %id)
TI_43960651   .a 355 to 869 63 to 581       519/878
(59 %)
5 diff
(99.5 %id)
CN282356 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 407 to 722 1 to 315       315/315
(100 %)
8 diff
(97.5 %id)
BP314510 mammary gland .a 513 to 1094 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
DA725772   .a 514 to 1067 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB075901 testis .a 514 to 1067 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB228905 trachea .a 514 to 1049 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB235677 trachea .a 514 to 1030 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DB238711 trachea .a 514 to 1097 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB282995 uterus .a 514 to 1063 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB071267 testis .a 525 to 1064 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB240878 trachea .a 526 to 1111 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
AU099206   .a 534 to 833 1 to 300       300/300
(100 %)
0 diff
(100 %id)
BP252770 Kidney .a 534 to 1114 1 to 581   tiling clone,   581/581
(100 %)
0 diff
(100 %id)
DA409994 thalamus .a 535 to 1094 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DB214570 trachea .a 535 to 1027 2 to 495   capped   494/494
(100 %)
2 diff
(99.6 %id)
DB237105 trachea .a 535 to 1095 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
BF800732 colon_ins .a 550 to 963 12 to 423       412/423
(97 %)
6 diff
(98.6 %id)
DR005401 Prostate .a 591 to 1306 1 to 715       715/715
(100 %)
6 diff
(99.2 %id)
BE149637 head_neck .a 635 to 1092 2 to 459       458/469
(97 %)
11 diff
(97.7 %id)
BC006526 Lung, small cell carcinoma .a 653 to 3816 1 to 3164   tiling clone, available from MGC, AAA   3164/3164
(100 %)
0 diff
(100 %id)
DB232102 trachea .a 658 to 1252 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
CB145126 Liver .a 667 to 976 1 to 310       310/310
(100 %)
6 diff
(98.1 %id)
BE790922 lung, small cell carcinoma .a 671 to 1453 1 to 779   available from MGC,   779/809
(96 %)
8 diff
(99.1 %id)
CN276908 embryonic stem cells, DMSO-treated H9 cellline .a 678 to 1024 1 to 347       347/347
(100 %)
1 diff
(99.8 %id)
AK304379 trachea .b 1 to 2361 1 to 2361 exact tiling clone,   2361/2361
(100 %)
1 diff
(100.0 %id)
DC418446 trachea .b 1 to 582 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
NM_001159575.1   .b 3 to 3200 1 to 3198 exact RefSeq, AAA   3198/3198
(100 %)
0 diff
(100 %id)
BI009739 kidney_tumor .b 104 to 347 33 to 278       246/278
(88 %)
6 diff
(97.9 %id)
BI765743 pooled colon, kidney, stomach .b 107 to 885 34 to 811       780/811
(96 %)
7 diff
(99.2 %id)
TI_57149159   .b 107 to 885 34 to 811       780/811
(96 %)
7 diff
(99.2 %id)
BC062613 Colon, Kidney, Stomach, adult, whole pooled .b 109 to 3196 3 to 3090   available from MGC, AAA   3090/3090
(100 %)
1 diff
(100.0 %id)
DQ402522 nasal epithelium .b 163 to 2172 1 to 2010       2010/2010
(100 %)
1 diff
(100.0 %id)
BI008043 kidney_tumor .b 169 to 572 1 to 406       406/420
(96 %)
4 diff
(99.1 %id)
DA763462 tongue .b 175 to 735 2 to 567   capped   566/566
(100 %)
6 diff
(99.0 %id)
BE563144 adenocarcinoma, Pancreas .b 201 to 935 1 to 732       732/735
(99 %)
7 diff
(99.1 %id)
BQ331159 lung_tumor .b 243 to 511 1 to 272       272/272
(100 %)
8 diff
(97.1 %id)
BM752509 Ascites, stomach .b 253 to 368 1 to 116       116/116
(100 %)
1 diff
(99.2 %id)
BF841663 head_neck .b 259 to 530 10 to 279       270/279
(96 %)
14 diff
(95.0 %id)
BF841466 head_neck .b 260 to 537 9 to 282       274/283
(96 %)
13 diff
(95.5 %id)
BE818772 breast_normal .b 284 to 544 1 to 260       260/260
(100 %)
7 diff
(97.4 %id)
BE818749 breast_normal .b 286 to 390 27 to 132       106/132
(80 %)
6 diff
(95.5 %id)
CX788626 human embryonic stem cells .b 293 to 1163 1 to 871       871/871
(100 %)
0 diff
(100 %id)
DB452154 testis .b 298 to 804 1 to 507       507/507
(100 %)
6 diff
(98.9 %id)
CV366953 breast_normal .b 308 to 559 1 to 259       259/264
(98 %)
6 diff
(97.8 %id)
BP256196 Kidney .b 338 to 919 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
CN334684 embryonic stem cells, cell lines H1, H7, andH9 .b 379 to 1090 1 to 713       713/713
(100 %)
2 diff
(99.8 %id)
DB213210 trachea .b 452 to 996 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
BU162881 ductal carcinoma, cell line, Pancreas .b 615 to 1410 1 to 794       794/1020
(77 %)
18 diff
(98.3 %id)
BU158004 ductal carcinoma, cell line, Pancreas .b 615 to 1451 1 to 841       838/906
(92 %)
10 diff
(98.9 %id)
BQ688216 ductal carcinoma, cell line, Pancreas .b 615 to 1489 1 to 879       879/879
(100 %)
8 diff
(99.1 %id)
CB142834 Liver .b 709 to 1270 1 to 564       564/564
(100 %)
3 diff
(99.5 %id)
BM008846 adenocarcinoma, Pancreas .b 740 to 1503 1 to 769       767/769
(99 %)
23 diff
(97.1 %id)
TI_59386564   .b 741 to 1503 64 to 831       766/768
(99 %)
22 diff
(97.2 %id)
DA729399   .b 807 to 1541 2 to 736   capped   735/735
(100 %)
0 diff
(100 %id)
BP293004 lung .b 857 to 1438 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DB109051 thymus .b 865 to 1451 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BP254672 Kidney .b 867 to 1449 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP293431 lung .b 871 to 1452 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
BP293702 lung .b 871 to 1388 1 to 518       518/578
(89 %)
15 diff
(97.5 %id)
CK903500 Islets of Langerhans, Pancreas .b 905 to 1503 1 to 599       599/599
(100 %)
0 diff
(100 %id)
BI964932 Islets of Langerhans, Pancreas .b 920 to 1506 1 to 587       587/587
(100 %)
0 diff
(100 %id)
BP254059 Kidney .b 943 to 1523 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
DA626436 Kidney .b 962 to 1525 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DA636610 Kidney .b 995 to 1586 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
BP291701 lung .b 1012 to 1592 1 to 583       583/583
(100 %)
3 diff
(99.5 %id)
BP292107 lung .b 1012 to 1584 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
BP293485 lung .b 1012 to 1588 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
BF038730 adenocarcinoma, ovary .b 1038 to 1797 2 to 767       766/1187
(64 %)
36 diff
(97.0 %id)
DB001193 breast, tumor tissue .b 1038 to 1598 8 to 568   capped   561/567
(98 %)
0 diff
(100 %id)
DA427753 colon .b 1068 to 1616 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AU125381   .b 1069 to 1843 2 to 780   capped   779/783
(99 %)
11 diff
(98.6 %id)
BP329222 rectum .b 1070 to 1650 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
DA583369 lung .b 1077 to 1612 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BE898342 adenocarcinoma cell line, ovary .b 1079 to 1751 1 to 671       671/671
(100 %)
2 diff
(99.8 %id)
DA429403 colon .b 1083 to 1660 2 to 581   capped   580/581
(99 %)
3 diff
(99.5 %id)
CB147595 Liver .b 1095 to 1685 1 to 590       590/590
(100 %)
3 diff
(99.5 %id)
BG468846 adenocarcinoma cell line, colon .b 1097 to 1860 1 to 765       765/765
(100 %)
4 diff
(99.5 %id)
BG746952 adenocarcinoma cell line, colon .b 1097 to 1947 1 to 852       852/852
(100 %)
17 diff
(98.1 %id)
DA251177 caudate nucleus .b 1111 to 1670 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AK025536   .b 1150 to 3196 1 to 2047   tiling clone, available from FLJ, AAA   2047/2047
(100 %)
1 diff
(100.0 %id)
BP238308 Liver .b 1150 to 1764 1 to 615       615/615
(100 %)
8 diff
(98.7 %id)
BF038512 adenocarcinoma, ovary .b 1151 to 1842 1 to 690       690/690
(100 %)
4 diff
(99.5 %id)
DB194214 ovary, tumor tissue .b 1158 to 1715 2 to 563   capped   562/562
(100 %)
5 diff
(99.2 %id)
AW799121 uterus .b 1176 to 1682 506 to 2       505/570
(88 %)
3 diff
(99.5 %id)
AW799295 uterus .b 1176 to 1657 500 to 21       480/566
(84 %)
2 diff
(99.7 %id)
DB202227 trachea .b 1179 to 1753 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
BP256448 Kidney .b 1180 to 1761 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
CR736324 pooled .b 1220 to 1690 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
CD675158 eye, lens .b 1226 to 1680 1 to 455       455/455
(100 %)
0 diff
(100 %id)
AU124465   .b 1246 to 1958 2 to 713   capped   712/715
(99 %)
8 diff
(98.9 %id)
BG110144 Bone, osteosarcoma, cell line .b 1304 to 1982 1 to 678       678/681
(99 %)
5 diff
(99.3 %id)
AW379740 head_neck .b 1327 to 1479 153 to 1       153/164
(93 %)
1 diff
(99.4 %id)
AL036530 brain .b 1357 to 1910 1 to 554       554/554
(100 %)
6 diff
(99.0 %id)
BM839133 Ascites, stomach .b 1360 to 1848 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BP293169 lung .b 1369 to 1949 1 to 582       582/582
(100 %)
7 diff
(98.8 %id)
CB216054 normal endometrium, late proliferativephase, cycle day 13, uterus .b 1405 to 1940 1 to 537       537/537
(100 %)
1 diff
(99.9 %id)
AA393950.
matches multiple genes
  .b 1427 to 1922 1 to 493     also hits gene FOLH1B 493/499
(98 %)
5 diff
(99.0 %id)
AA035472 uterus .b 1450 to 1791 13 to 357       345/358
(96 %)
18 diff
(95.0 %id)
BP255320 Kidney .b 1454 to 2034 1 to 581       581/585
(99 %)
4 diff
(99.4 %id)
CX760428 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 1481 to 2276 1 to 792     Submitted on the opposite strand 792/792
(100 %)
8 diff
(99.0 %id)
BF035039 adenocarcinoma, ovary .b 1490 to 2166 1 to 662       662/672
(98 %)
12 diff
(98.3 %id)
BG982523 colon_normal .b 1491 to 1796 1 to 306       306/306
(100 %)
3 diff
(99.1 %id)
BG822201 adenocarcinoma cell line, colon .b 1499 to 2272 1 to 785       785/791
(99 %)
39 diff
(95.1 %id)
BG984843 colon_normal .b 1506 to 1907 1 to 402       402/402
(100 %)
2 diff
(99.6 %id)
BE264628 lung, small cell carcinoma .b 1512 to 2084 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
BI000180 head_normal .b 1517 to 1905 1 to 391       392/392
(100 %)
10 diff
(97.5 %id)
AW249071 lung, small cell carcinoma .b 1517 to 1969 17 to 475       459/475
(96 %)
6 diff
(98.8 %id)
BG469360 adenocarcinoma cell line, colon .b 1519 to 2015 1 to 501       501/656
(76 %)
12 diff
(98.2 %id)
CA395982 eye, RPE/choroid .b 1528 to 2163 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
BP334965 salivary gland .b 1533 to 1947 1 to 415       415/581
(71 %)
10 diff
(98.3 %id)
CD610391   .b 1541 to 1785 8 to 252       245/273
(89 %)
8 diff
(97.1 %id)
CD610392   .b 1541 to 1785 263 to 19       245/270
(90 %)
0 diff
(100 %id)
BG824555 adenocarcinoma cell line, colon .b 1556 to 2264 1 to 718       718/746
(96 %)
29 diff
(96.2 %id)
BM742187 Ascites, stomach .b 1567 to 2120 1 to 553       553/553
(100 %)
1 diff
(99.9 %id)
BM759331 Ascites, stomach .b 1567 to 2074 1 to 507       507/507
(100 %)
1 diff
(99.9 %id)
BM772569 Ascites, stomach .b 1567 to 1957 1 to 390       390/390
(100 %)
1 diff
(99.8 %id)
BE293100 adenocarcinoma cell line, colon .b 1576 to 2161 1 to 584       584/584
(100 %)
5 diff
(99.2 %id)
CR999291 T-Lymphocytes .b 1581 to 2095 1 to 515       515/515
(100 %)
0 diff
(100 %id)
BG928036 cartilage .b 1586 to 2189 80 to 683       604/619
(97 %)
12 diff
(98.1 %id)
BE745800 adenocarcinoma cell line, ovary .b 1612 to 2335 1 to 715       715/963
(74 %)
60 diff
(93.8 %id)
BE746219 adenocarcinoma cell line, ovary .b 1613 to 2096 1 to 479       479/490
(97 %)
5 diff
(99.0 %id)
BG470299 adenocarcinoma cell line, colon .b 1643 to 2054 1 to 415       415/761
(54 %)
9 diff
(98.9 %id)
DR423184 eye, Pterygium .b 1648 to 1919 1 to 272       272/272
(100 %)
2 diff
(99.3 %id)
BG286762 bladder, transitional cell papilloma, cell line .b 1791 to 2250 1 to 462       462/462
(100 %)
4 diff
(99.2 %id)
BG036652 adenocarcinoma, cell line, Prostate .b 1811 to 2555 4 to 736   AAA   733/915
(80 %)
39 diff
(95.8 %id)
BE816414 breast_normal .b 1832 to 2038 207 to 1       207/207
(100 %)
2 diff
(99.1 %id)
BQ326473 colon_normal .b 1874 to 2035 183 to 22       162/183
(88 %)
0 diff
(100 %id)
CB852762 Human Lung Epithelial cells, lung .b 1897 to 2588 694 to 3       692/694
(99 %)
0 diff
(100 %id)
CU446595 epidermis .b 1996 to 2693 702 to 5     Submitted on the opposite strand 698/702
(99 %)
0 diff
(100 %id)
BU185605 ductal carcinoma, cell line, Pancreas .b 2020 to 2765 1 to 757       757/946
(80 %)
21 diff
(97.8 %id)
CN387994 embryonic stem cells, DMSO-treated H9 cellline .b 2022 to 2345 1 to 324       324/324
(100 %)
4 diff
(98.8 %id)
BF038982 adenocarcinoma, ovary .b 2048 to 2656 1 to 605       605/607
(99 %)
5 diff
(99.2 %id)
BE315490 adenocarcinoma cell line, ovary .b 2049 to 2736 1 to 688       688/688
(100 %)
9 diff
(98.7 %id)
BI006693 kidney_tumor .b 2119 to 2425 308 to 2       307/308
(99 %)
0 diff
(100 %id)
BM741035 Ascites, stomach .b 2141 to 2651 1 to 511       511/511
(100 %)
5 diff
(99.1 %id)
BM757096 Ascites, stomach .b 2141 to 2649 1 to 509       509/509
(100 %)
2 diff
(99.7 %id)
BM766524 Ascites, stomach .b 2141 to 2647 1 to 507       507/507
(100 %)
2 diff
(99.7 %id)
BM770329 Ascites, stomach .b 2141 to 2681 1 to 541       541/541
(100 %)
2 diff
(99.7 %id)
BG983571 colon_normal .b 2142 to 2492 1 to 350       350/351
(99 %)
7 diff
(98.1 %id)
BG984519 colon_normal .b 2146 to 2691 4 to 549       546/549
(99 %)
9 diff
(98.4 %id)
T28389 uterus .b 2147 to 2331 1 to 185       185/185
(100 %)
1 diff
(99.5 %id)
BE898397 adenocarcinoma cell line, ovary .b 2188 to 2770 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
AA402773 ovarian tumor, ovary .b 2197 to 2646 15 to 464       450/464
(96 %)
6 diff
(98.8 %id)
BF334954 colon .b 2218 to 2506 289 to 1       289/303
(95 %)
2 diff
(99.4 %id)
BF087429 head_neck .b 2219 to 2566 24 to 370       347/370
(93 %)
6 diff
(98.4 %id)
BG261290 bladder, transitional cell papilloma, cell line .b 2257 to 3073 1 to 813       813/822
(98 %)
21 diff
(97.5 %id)
AW796814 uterus .b 2294 to 2792 516 to 19       498/519
(95 %)
0 diff
(100 %id)
BE001985 breast_normal .b 2303 to 2639 397 to 62     Submitted on the opposite strand 336/401
(83 %)
0 diff
(100 %id)
BM824968 Ascites, stomach .b 2308 to 2981 1 to 674       674/674
(100 %)
1 diff
(99.9 %id)
AW578023 colon_normal .b 2313 to 2915 642 to 40       603/642
(93 %)
0 diff
(100 %id)
BF882775 lung_tumor .b 2322 to 2754 9 to 436       428/436
(98 %)
6 diff
(98.7 %id)
BF882779 lung_tumor .b 2330 to 2479 152 to 5     Submitted on the opposite strand 148/152
(97 %)
0 diff
(100 %id)
TI_149273582   .b 2335 to 3200 936 to 88   AAA   849/1007
(84 %)
20 diff
(98.1 %id)
BU185396 ductal carcinoma, cell line, Pancreas .b 2338 to 3077 1 to 746       746/968
(77 %)
14 diff
(98.6 %id)
BU174404 ductal carcinoma, cell line, Pancreas .b 2338 to 3172 1 to 850   AAA   850/886
(95 %)
20 diff
(97.8 %id)
BQ689113 ductal carcinoma, cell line, Pancreas .b 2338 to 3133 1 to 802       802/869
(92 %)
9 diff
(99.0 %id)
BQ690364 ductal carcinoma, cell line, Pancreas .b 2338 to 3198 1 to 861       861/934
(92 %)
3 diff
(99.7 %id)
BQ901084 ductal carcinoma, cell line, Pancreas .b 2338 to 2886 1 to 552       552/996
(55 %)
20 diff
(98.0 %id)
BQ689552 ductal carcinoma, cell line, Pancreas .b 2338 to 3196 1 to 858       858/924
(92 %)
5 diff
(99.5 %id)
TI_153981725   .b 2338 to 3001 78 to 751       674/1392
(48 %)
40 diff
(97.2 %id)
BQ322832 colon_est .b 2344 to 2688 9 to 357       349/357
(97 %)
11 diff
(97.0 %id)
BM817469 Ascites, stomach .b 2347 to 2680 1 to 334       334/334
(100 %)
6 diff
(98.3 %id)
EC511753 Prostate .b 2360 to 2455 100 to 4       97/105
(92 %)
0 diff
(100 %id)
AW366994 head_neck .b 2365 to 2976 627 to 10       618/627
(98 %)
0 diff
(100 %id)
BF083305 colon .b 2366 to 2885 520 to 1       520/520
(100 %)
3 diff
(99.5 %id)
EC466391 Prostate .b 2367 to 2471 108 to 5       104/110
(94 %)
0 diff
(100 %id)
BG996729 head_neck .b 2373 to 2800 431 to 5       427/431
(99 %)
0 diff
(100 %id)
EC499260 Prostate .b 2383 to 2495 113 to 1       113/113
(100 %)
0 diff
(100 %id)
BF820434 kidney_tumor .b 2384 to 2851 1 to 468       468/468
(100 %)
36 diff
(92.4 %id)
EC518081 Prostate .b 2384 to 2485 113 to 14       100/113
(88 %)
0 diff
(100 %id)
BF083313 colon .b 2389 to 2873 489 to 2       488/489
(99 %)
0 diff
(100 %id)
BI117571 lung, small cell carcinoma .b 2389 to 3190 1 to 801       801/879
(91 %)
3 diff
(99.7 %id)
TI_149303807   .b 2394 to 3196 880 to 89   AAA   792/941
(84 %)
16 diff
(98.3 %id)
AA482625 ovarian tumor, ovary .b 2399 to 2825 1 to 426       426/426
(100 %)
1 diff
(99.8 %id)
EC444297 Prostate .b 2407 to 2511 129 to 23       107/129
(82 %)
0 diff
(100 %id)
EC552663 Prostate .b 2410 to 2528 121 to 6       116/121
(95 %)
0 diff
(100 %id)
EC554204 Prostate .b 2410 to 2535 127 to 2       126/127
(99 %)
0 diff
(100 %id)
EC447374 Prostate .b 2414 to 2538 126 to 2       125/126
(99 %)
0 diff
(100 %id)
EC535264 Prostate .b 2414 to 2537 123 to 1       123/123
(100 %)
1 diff
(99.2 %id)
EC563676 Prostate .b 2414 to 2537 122 to 1       122/122
(100 %)
2 diff
(98.4 %id)
EC466812 Prostate .b 2416 to 2534 121 to 1       121/121
(100 %)
2 diff
(98.4 %id)
TI_149315066   .b 2417 to 3196 860 to 88   AAA   773/953
(81 %)
12 diff
(98.8 %id)
BF880606 lung_tumor .b 2424 to 2919 506 to 11     Submitted on the opposite strand 496/506
(98 %)
0 diff
(100 %id)
BF882770 lung_tumor .b 2426 to 2919 501 to 9     Submitted on the opposite strand 493/501
(98 %)
0 diff
(100 %id)
EC451546 Prostate .b 2431 to 2543 1 to 112       112/116
(96 %)
6 diff
(94.9 %id)
EC538468 Prostate .b 2431 to 2543 1 to 111       111/115
(96 %)
7 diff
(94.0 %id)
EC576750 Prostate .b 2441 to 2554 112 to 1       112/112
(100 %)
2 diff
(98.3 %id)
EC461012 Prostate .b 2446 to 2554 107 to 1       107/112
(95 %)
1 diff
(99.2 %id)
TI_149284675   .b 2448 to 3200 824 to 82   AAA   743/1111
(66 %)
38 diff
(96.6 %id)
BI160595 epithelioid carcinoma cell line, Pancreas .b 2461 to 3196 1 to 735   AAA   735/735
(100 %)
4 diff
(99.5 %id)
TI_149300099   .b 2481 to 3196 799 to 94   AAA   706/754
(93 %)
59 diff
(92.2 %id)
TI_149304882   .b 2486 to 3196 817 to 114   AAA   704/929
(75 %)
25 diff
(97.4 %id)
BF882771 lung_tumor .b 2489 to 2805 147 to 463       317/463
(68 %)
6 diff
(98.8 %id)
TI_154025819   .b 2499 to 3196 784 to 88   AAA   697/697
(100 %)
4 diff
(99.5 %id)
BM981737 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2512 to 3196 703 to 19   AAA   685/685
(100 %)
0 diff
(100 %id)
BG925545 cartilage .b 2516 to 3110 86 to 680       595/612
(97 %)
4 diff
(99.4 %id)
BU675912 lung, Primary Lung Epithelial Cells .b 2518 to 3200 700 to 19   AAA   682/682
(100 %)
3 diff
(99.6 %id)
CB851743 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2519 to 3196 694 to 19   AAA   676/676
(100 %)
3 diff
(99.6 %id)
BI019208 marrow .b 2520 to 3036 1 to 518       518/518
(100 %)
12 diff
(97.7 %id)
BI013414 lung_tumor .b 2525 to 2877 364 to 16       349/364
(95 %)
0 diff
(100 %id)
BE093028 breast .b 2529 to 2994 19 to 484       466/484
(96 %)
6 diff
(98.8 %id)
BF759881 colon .b 2531 to 2891 3 to 363       361/364
(99 %)
8 diff
(97.9 %id)
CA440068 lung, Metastatic Chondrosarcoma .b 2537 to 3196 678 to 19   AAA   660/664
(99 %)
2 diff
(99.7 %id)
BE934492 head_neck .b 2542 to 2860 19 to 334       316/334
(94 %)
6 diff
(98.3 %id)
BF820430 kidney_tumor .b 2542 to 2817 1 to 276       276/277
(99 %)
12 diff
(95.7 %id)
BF754887 colon .b 2551 to 2865 325 to 11     Submitted on the opposite strand 315/325
(96 %)
0 diff
(100 %id)
BF884590 lung_tumor .b 2559 to 2842 28 to 313       286/313
(91 %)
6 diff
(98.1 %id)
R48145 breast .b 2562 to 2941 1 to 393   fully sequenced,   393/393
(100 %)
19 diff
(95.2 %id)
H39921 breast .b 2562 to 2931 1 to 377   fully sequenced,   377/377
(100 %)
8 diff
(97.9 %id)
BI013399 lung_tumor .b 2578 to 2829 1 to 249       249/249
(100 %)
5 diff
(98.0 %id)
AA459197 ovarian tumor, ovary .b 2580 to 2981 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
BX104241 ovarian tumor, ovary .b 2582 to 3189 1 to 607       607/607
(100 %)
4 diff
(99.4 %id)
EL953057 eyeball .b 2582 to 3196 1 to 615   AAA   615/615
(100 %)
6 diff
(99.1 %id)
BI006032 kidney_tumor .b 2594 to 2775 24 to 207       184/207
(88 %)
6 diff
(97.2 %id)
CK903499 Islets of Langerhans, Pancreas .b 2615 to 3196 595 to 12   AAA   584/584
(100 %)
1 diff
(99.9 %id)
AW363013 colon .b 2623 to 2880 1 to 258       258/275
(93 %)
4 diff
(98.6 %id)
BU163535 ductal carcinoma, cell line, Pancreas .b 2630 to 3196 1 to 567   AAA   567/567
(100 %)
0 diff
(100 %id)
BQ690483 ductal carcinoma, cell line, Pancreas .b 2630 to 3196 1 to 567   AAA   567/567
(100 %)
0 diff
(100 %id)
AA516464 colon .b 2640 to 3197 553 to 1       553/553
(100 %)
24 diff
(95.7 %id)
BM978392 lung, Primary Lung Epithelial Cells .b 2651 to 3196 565 to 19   AAA   547/547
(100 %)
8 diff
(98.6 %id)
AU148319   .b 2655 to 3196 543 to 1       543/545
(99 %)
16 diff
(97.1 %id)
AA402792 ovarian tumor, ovary .b 2657 to 3202 546 to 2       545/546
(99 %)
0 diff
(100 %id)
BP255176 Kidney .b 2659 to 3196 1 to 538   AAA   538/538
(100 %)
2 diff
(99.7 %id)
TI_59395112   .b 2661 to 3146 492 to 3       490/492
(99 %)
0 diff
(100 %id)
BF755384 colon .b 2663 to 3297 1 to 628   tiling clone,   628/631
(99 %)
11 diff
(98.3 %id)
AA535868 colon .b 2676 to 3196 518 to 1       518/543
(95 %)
14 diff
(97.5 %id)
AW249694 lung, small cell carcinoma .b 2685 to 3200 526 to 11   AAA   516/516
(100 %)
1 diff
(99.9 %id)
BM976248 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 2689 to 3196 527 to 19   AAA   509/509
(100 %)
4 diff
(99.3 %id)
AW024917 Kidney .b 2705 to 3198 496 to 1       496/496
(100 %)
3 diff
(99.4 %id)
AW178791 head_neck .b 2729 to 3033 326 to 22       305/326
(93 %)
0 diff
(100 %id)
BU680600 lung, Primary Lung Epithelial Cells .b 2744 to 3200 475 to 19   AAA   457/457
(100 %)
2 diff
(99.6 %id)
AA477362 ovarian tumor, ovary .b 2747 to 3095 1 to 349       349/349
(100 %)
0 diff
(100 %id)
AI453273 adenocarcinoma, Pancreas .b 2751 to 3198 451 to 4       448/451
(99 %)
0 diff
(100 %id)
AI885511 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2759 to 3201 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AA573425 colon .b 2765 to 3198 433 to 1       433/433
(100 %)
1 diff
(99.8 %id)
AW190184 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 2767 to 3197 428 to 1       428/428
(100 %)
7 diff
(98.4 %id)
AW080449 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 2768 to 3197 430 to 1       430/430
(100 %)
0 diff
(100 %id)
AU149053   .b 2780 to 3196 417 to 1       417/418
(99 %)
2 diff
(99.6 %id)
AI588881 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2781 to 3198 421 to 4       418/421
(99 %)
0 diff
(100 %id)
AI673588 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 2782 to 3198 418 to 2       417/418
(99 %)
0 diff
(100 %id)
AA551653 colon .b 2783 to 3196 438 to 26   AAA   413/413
(100 %)
1 diff
(99.8 %id)
AI804876 Prostate .b 2783 to 3198 418 to 2       417/418
(99 %)
0 diff
(100 %id)
AW070576 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .b 2784 to 3197 414 to 1       414/414
(100 %)
1 diff
(99.8 %id)
AI261669 Kidney .b 2798 to 3200 403 to 1       403/403
(100 %)
0 diff
(100 %id)
AA861895   .b 2801 to 3198 398 to 2       397/402
(98 %)
0 diff
(100 %id)
AA641560 invasive tumor (cell line), Prostate .b 2806 to 3202 399 to 3       397/399
(99 %)
0 diff
(100 %id)
AA812330 epithelium (cell line), Prostate .b 2806 to 3197 391 to 1       391/391
(100 %)
1 diff
(99.8 %id)
AA931735 2 pooled tumors (clear cell type), Kidney .b 2806 to 3198 395 to 4       392/395
(99 %)
0 diff
(100 %id)
AI289786 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 2808 to 3199 395 to 4       392/395
(99 %)
0 diff
(100 %id)
AA435775   .b 2811 to 3196 386 to 1       386/386
(100 %)
3 diff
(99.3 %id)
AI017803 Kidney .b 2812 to 3196 385 to 1       385/385
(100 %)
0 diff
(100 %id)
BG982337 colon_normal .b 2817 to 2860 45 to 2       421/457
(92 %)
9 diff
(98.1 %id)
AI699795 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2836 to 3196 371 to 11   AAA   361/361
(100 %)
0 diff
(100 %id)
AA630143 lung .b 2837 to 3076 240 to 1       240/240
(100 %)
0 diff
(100 %id)
AA834340 epithelium (cell line), Prostate .b 2838 to 3202 369 to 6       364/369
(98 %)
0 diff
(100 %id)
AW152290 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 2843 to 3196 353 to 1       353/353
(100 %)
1 diff
(99.8 %id)
AI445126 colon, moderately-differentiated adenocarcinoma .b 2846 to 3196 361 to 11   AAA   351/351
(100 %)
3 diff
(99.2 %id)
BF896692 marrow .b 2848 to 3077 372 to 143     Submitted on the opposite strand 230/372
(61 %)
0 diff
(100 %id)
AI263551 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2848 to 3197 350 to 1       350/350
(100 %)
2 diff
(99.5 %id)
AI337246 colon, colon tumor, RER+ .b 2848 to 3197 350 to 1       350/350
(100 %)
0 diff
(100 %id)
AI860441 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 2850 to 3202 356 to 4       353/356
(99 %)
0 diff
(100 %id)
AA477114.
matches multiple genes
ovarian tumor, ovary .b 2861 to 3196 360 to 25   AAA also hits gene C20orf108 336/336
(100 %)
0 diff
(100 %id)
AA885926 Kidney .b 2871 to 3196 342 to 18   AAA   325/325
(100 %)
1 diff
(99.7 %id)
BG993658 head_neck .b 2888 to 3200 1 to 311   AAA   311/311
(100 %)
3 diff
(99.1 %id)
BG993985 head_neck .b 2888 to 3056 169 to 1       169/169
(100 %)
1 diff
(99.5 %id)
BG997128 head_neck .b 2888 to 3191 304 to 1       304/304
(100 %)
1 diff
(99.7 %id)
AA480364 colon .b 2890 to 3202 315 to 4       312/315
(99 %)
0 diff
(100 %id)
H28438 breast .b 2901 to 3200 301 to 1   fully sequenced,   301/301
(100 %)
6 diff
(98.1 %id)
AA573919 colon, tumor .b 2901 to 3198 300 to 4       297/300
(99 %)
0 diff
(100 %id)
AW247908 lung, small cell carcinoma .b 2908 to 3196 299 to 11   AAA   289/289
(100 %)
0 diff
(100 %id)
R48146 breast .b 2911 to 3196 293 to 1   fully sequenced,   293/293
(100 %)
5 diff
(98.3 %id)
AW005377 colon .b 2921 to 3202 284 to 3       282/284
(99 %)
0 diff
(100 %id)
AA565785 colon, tumor .b 2922 to 3196 287 to 14   AAA   274/274
(100 %)
1 diff
(99.7 %id)
DB517695 testis .b 2934 to 3196 1 to 265     Submitted on the opposite strand 265/265
(100 %)
8 diff
(97.0 %id)
D45514 lung .b 2975 to 3202 1 to 228     Submitted on the opposite strand 228/284
(80 %)
3 diff
(99.0 %id)
AA909839 ovary, serous adenocarcinoma .b 3054 to 3196 142 to 1       142/142
(100 %)
1 diff
(99.3 %id)
C75227   .b 3055 to 3202 151 to 4       148/151
(98 %)
0 diff
(100 %id)
BF512701   .b 3070 to 3193 14 to 137   AAA Submitted on the opposite strand 124/147
(84 %)
4 diff
(97.3 %id)
AA458982 ovarian tumor, ovary .b 3075 to 3202 130 to 4       127/130
(97 %)
0 diff
(100 %id)
DB234274 trachea .c 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
DB154626 thymus .c 30 to 566 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB157001 thymus .c 30 to 607 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DB238731 trachea .c 30 to 588 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA318480 hippocampus .c 31 to 588 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB070482 testis .c 31 to 546 2 to 517   capped   516/516
(100 %)
1 diff
(99.9 %id)
DB087048 testis .c 31 to 505 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
DB234217 trachea .c 31 to 599 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DB227267 trachea .c 33 to 559 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DB137691 thymus .c 35 to 579 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA870123 Prostate .c 39 to 552 2 to 515   capped   514/514
(100 %)
3 diff
(99.5 %id)
DA312094 hippocampus .c 59 to 601 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB073313 testis .c 65 to 603 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA047986   .c 184 to 775 2 to 592   capped   591/591
(100 %)
3 diff
(99.5 %id)
NM_001038.5   .c 472 to 3798 1 to 3327 exact RefSeq, AAA   3327/3327
(100 %)
0 diff
(100 %id)
DB232484 trachea .c 473 to 1059 2 to 588   tiling clone, capped   587/587
(100 %)
1 diff
(99.9 %id)
DB221898 trachea .c 622 to 1171 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB232977 trachea .c 622 to 1077 2 to 457   capped   456/456
(100 %)
0 diff
(100 %id)
BP313094 mammary gland .c 643 to 1238 1 to 596       596/596
(100 %)
4 diff
(99.4 %id)
BP354197   .c 643 to 1239 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
AU104702   .c 648 to 697 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BP351620   .c 648 to 1235 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
DB140046 thymus .c 648 to 1147 2 to 501   capped   500/500
(100 %)
1 diff
(99.8 %id)
DA442817 tongue, tumor tissue .c 649 to 1213 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA447792 tongue, tumor tissue .c 649 to 1189 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DA854639 placenta .c 649 to 1211 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA876981 Prostate .c 649 to 1220 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA999749 breast, tumor tissue .c 649 to 1198 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DB005054 breast, tumor tissue .c 649 to 1185 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB006229 breast, tumor tissue .c 649 to 1178 2 to 531   capped   530/547
(96 %)
2 diff
(99.7 %id)
DB197885 trachea .c 649 to 1226 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB220538 trachea .c 649 to 1210 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DB226101 trachea .c 649 to 1246 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DB228382 trachea .c 649 to 1205 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DB232500 trachea .c 649 to 1233 2 to 586   capped   585/585
(100 %)
1 diff
(99.9 %id)
DB234041 trachea .c 649 to 1223 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB240137 trachea .c 649 to 1242 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
X76180 lung .c 662 to 3794 1 to 3133 exact tiling clone, AAA   3133/3133
(100 %)
0 diff
(100 %id)
CD610389   .c 672 to 1169 497 to 1       497/497
(100 %)
5 diff
(99.0 %id)
CD610390   .c 672 to 1169 1 to 497       497/500
(99 %)
6 diff
(98.8 %id)
DB228551 trachea .d 1 to 571 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB241411 trachea .d 1 to 600 2 to 601   tiling clone, capped   600/600
(100 %)
0 diff
(100 %id)
DA874779 Prostate .d 86 to 649 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB224909 trachea .d 87 to 644 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA459524 tongue, tumor tissue .d 113 to 572 2 to 461   capped   460/460
(100 %)
0 diff
(100 %id)
DB213113 trachea .d 114 to 667 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB233726 trachea .d 114 to 682 2 to 570   capped   569/578
(98 %)
1 diff
(99.9 %id)
DB234699 trachea .d 114 to 582 2 to 470   capped   469/469
(100 %)
1 diff
(99.8 %id)
DA630767 Kidney .d 185 to 758 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
CD013900   .d 245 to 2580 1 to 2337 R480S N481E G482W S483V S484F ... tiling clone,   2337/2337
(100 %)
1 diff
(100.0 %id)
NM_001065.3   .e 1 to 2224 2 to 2225 exact RefSeq, AAA   2225/2225
(100 %)
0 diff
(100 %id)
DA010826 adrenal gland .e 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA694726   .e 1 to 578 2 to 579   tiling clone, capped   578/578
(100 %)
0 diff
(100 %id)
AK315509 tongue .e 3 to 1670 1 to 1668 K255E     1668/1668
(100 %)
2 diff
(99.9 %id)
DA023840   .e 11 to 583 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
CR606215 B cells (Ramos cell line) Cot 25-normalized .e 18 to 2174 1 to 2157 exact     2157/2157
(100 %)
0 diff
(100 %id)
DA979395 synovial membrane tissue from rheumatioidarthritis .e 23 to 593 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA030449   .e 26 to 598 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA485034 brain .e 26 to 604 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA716461   .e 26 to 599 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DB262361 uterus .e 26 to 597 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA024985   .e 29 to 605 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA749964   .e 29 to 602 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA697627   .e 31 to 608 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA252301 caudate nucleus .e 34 to 620 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA762561 tongue .e 39 to 609 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA919651 small intestine .e 39 to 617 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BP277843   .e 41 to 634 1 to 594       594/594
(100 %)
0 diff
(100 %id)
DA022786   .e 42 to 614 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA024674   .e 42 to 618 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA160129 amygdala .e 42 to 619 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA373881 thalamus .e 42 to 614 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA379824 thalamus .e 42 to 679 2 to 639   capped   638/638
(100 %)
0 diff
(100 %id)
DA555245   .e 42 to 611 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA729522   .e 42 to 898 2 to 856   capped   855/856
(99 %)
13 diff
(98.5 %id)
DA762678 tongue .e 42 to 624 2 to 584   capped   583/584
(99 %)
0 diff
(100 %id)
DA880761   .e 42 to 779 2 to 738   capped   737/751
(98 %)
6 diff
(99.3 %id)
DA933546 Spleen .e 42 to 635 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA954348 Spleen .e 42 to 621 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB199327 trachea .e 42 to 624 2 to 584   capped   583/584
(99 %)
0 diff
(100 %id)
DB200259 trachea .e 42 to 626 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB254621 uterus .e 42 to 613 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB256860 uterus .e 42 to 619 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB260025 uterus .e 42 to 626 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB260031 uterus .e 42 to 624 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
DB264212 uterus .e 42 to 632 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA691516   .e 44 to 628 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
AU126303   .e 56 to 856 2 to 805   capped   804/833
(96 %)
15 diff
(98.2 %id)
BU189221 melanotic melanoma, skin .e 58 to 923 1 to 871       871/872
(99 %)
14 diff
(98.4 %id)
DA685310   .e 71 to 647 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA013944 adrenal gland .e 72 to 645 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BC010140 Muscle, rhabdomyosarcoma .e 72 to 2224 1 to 2152 exact tiling clone, available from MGC, AAA   2152/2152
(100 %)
1 diff
(100.0 %id)
BP206406 coronary artery .e 72 to 653 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP290554 lung .e 73 to 650 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DA672731   .e 73 to 667 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA675811   .e 73 to 664 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
AK291088   .e 74 to 2012 1 to 1939 R394L     1939/1939
(100 %)
1 diff
(100.0 %id)
DA675924   .e 74 to 659 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA729348   .e 75 to 825 2 to 752   capped   751/759
(98 %)
5 diff
(99.4 %id)
DA548685   .e 77 to 651 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA594989 lung .e 77 to 653 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA672021   .e 77 to 665 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA875401 Prostate .e 77 to 648 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA905984   .e 77 to 650 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA930720 small intestine .e 77 to 660 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB123675 thymus .e 77 to 715 2 to 640   capped   639/639
(100 %)
0 diff
(100 %id)
DB157267 thymus .e 77 to 660 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA020999   .e 82 to 651 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA032165   .e 82 to 666 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA297902 hippocampus .e 82 to 654 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA378413 thalamus .e 82 to 709 2 to 629   capped   628/628
(100 %)
0 diff
(100 %id)
DA382954 thalamus .e 82 to 719 2 to 639   capped   638/638
(100 %)
0 diff
(100 %id)
DA549095   .e 82 to 658 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA585755 lung .e 82 to 695 2 to 615   capped   614/614
(100 %)
0 diff
(100 %id)
DA672951   .e 82 to 671 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA691723   .e 82 to 652 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA750437   .e 82 to 652 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA752478   .e 82 to 658 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA925658 small intestine .e 82 to 665 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA927645 small intestine .e 82 to 671 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DB109809 thymus .e 82 to 659 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB191315 lung, tumor tissue .e 82 to 657 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB264707 uterus .e 82 to 680 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA667261 esophagus .e 84 to 654 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA620394   .e 85 to 678 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
BX399373 Placenta Cot 25-normalized .e 88 to 1030 1 to 941       941/948
(99 %)
10 diff
(99.0 %id)
BP253172 Kidney .e 88 to 673 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DA061543 cerebellum .e 91 to 661 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA374159 thalamus .e 91 to 709 2 to 620   capped   619/619
(100 %)
0 diff
(100 %id)
DA465999   .e 91 to 666 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA586255 lung .e 91 to 696 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
BE295225 muscle, rhabdomyosarcoma .e 91 to 714 1 to 624       624/624
(100 %)
1 diff
(99.9 %id)
DA658239   .e 91 to 670 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA762680 tongue .e 91 to 661 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA953677 Spleen .e 91 to 663 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB012378 esophageal, tumor tissue .e 91 to 672 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA674897   .e 92 to 678 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA382321 thalamus .e 93 to 662 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BM839984 myeloma .e 93 to 666 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DA764826 tongue .e 94 to 679 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
M63121   .e 97 to 2208 1 to 2112 exact tiling clone,   2112/2112
(100 %)
0 diff
(100 %id)
DA420071 cord Blood .e 109 to 682 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA601740   .e 109 to 685 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BI769006 pooled lung and spleen .e 109 to 980 1 to 868       868/872
(99 %)
13 diff
(98.6 %id)
DA620598   .e 109 to 684 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA671056   .e 109 to 698 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA672193   .e 109 to 679 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA038552   .e 111 to 683 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA601877   .e 111 to 681 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA010302 adrenal gland .e 113 to 693 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
BP278447   .e 113 to 695 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP358691 mammary gland .e 113 to 694 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA015644 adrenal gland .e 114 to 688 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA028279   .e 114 to 686 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA033380   .e 114 to 700 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA075665 cerebellum .e 114 to 693 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA101536 cerebellum .e 114 to 701 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA142966 alzheimer cortex .e 114 to 700 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA419409 cord Blood .e 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
CR596841 Placenta Cot 25-normalized .e 114 to 2178 1 to 2065 exact     2065/2065
(100 %)
0 diff
(100 %id)
DA482992   .e 114 to 700 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DA529509 brain .e 114 to 717 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA541295 lung .e 114 to 685 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA549234   .e 114 to 705 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA549796   .e 114 to 689 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA555017   .e 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA566270 heart .e 114 to 686 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA584821 lung .e 114 to 710 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA594986 lung .e 114 to 689 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA595356 lung .e 114 to 693 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA656735   .e 114 to 686 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA657660   .e 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA671160   .e 114 to 699 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA673225   .e 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA673296   .e 114 to 683 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA673479   .e 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA674430   .e 114 to 708 2 to 596   capped   595/595
(100 %)
0 diff
(100 %id)
DA677430   .e 114 to 689 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA706942   .e 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA707126   .e 114 to 689 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DA716425   .e 114 to 688 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA752008   .e 114 to 684 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA762445 tongue .e 114 to 702 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA917312 small intestine .e 114 to 691 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA925832 small intestine .e 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA931930 Spleen .e 114 to 705 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA939230 Spleen .e 114 to 716 2 to 604   capped   603/603
(100 %)
0 diff
(100 %id)
DA941489 Spleen .e 114 to 704 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA955956 Spleen .e 114 to 687 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA999044 breast, tumor tissue .e 114 to 685 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB262168 uterus .e 114 to 688 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DB188947 liver, tumor tissue .e 115 to 691 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB039189 testis .e 116 to 686 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
M33294   .e 122 to 2209 1 to 2087 exact     2087/2087
(100 %)
3 diff
(99.9 %id)
DA746769   .e 125 to 696 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BI870917 adenocarcinoma, cell line, Liver .e 126 to 980 1 to 856       855/859
(99 %)
17 diff
(98.1 %id)
M58286   .e 126 to 2208 10 to 2092 exact AAA   2083/2092
(99 %)
6 diff
(99.8 %id)
X55313   .e 128 to 2208 81 to 2161 exact     2081/2161
(96 %)
6 diff
(99.8 %id)
BI821169 pooled brain, lung, testis .e 132 to 946 1 to 818       818/818
(100 %)
6 diff
(99.3 %id)
CT003647 T-Lymphocytes .e 132 to 985 1 to 852       852/852
(100 %)
3 diff
(99.7 %id)
BQ723589 sympathetic trunk .e 133 to 856 1 to 724       724/872
(83 %)
6 diff
(99.4 %id)
CD515445 White Matter .e 140 to 1007 1 to 875       875/878
(99 %)
13 diff
(98.6 %id)
BU181102 large cell carcinoma, lung .e 141 to 1016 1 to 882       882/883
(99 %)
16 diff
(98.2 %id)
A21522   .e 149 to 2210 1 to 2061 exact     2061/2062
(99 %)
11 diff
(99.5 %id)
M60275 placenta .e 149 to 2210 1 to 2049 P412R R414E E415A A416T T417L ...     2049/2050
(99 %)
21 diff
(99.0 %id)
CV570222 cornea, eye .e 164 to 782 1 to 619       619/619
(100 %)
0 diff
(100 %id)
CB134521 Liver .e 212 to 811 1 to 600       600/600
(100 %)
0 diff
(100 %id)
CV028409 mixed .e 303 to 946 1 to 644       644/644
(100 %)
0 diff
(100 %id)
BG180101 adenocarcinoma, cell line, Prostate .e 306 to 1049 1 to 742       742/974
(76 %)
23 diff
(97.7 %id)
BQ723672 dorsal root ganglia .e 413 to 1322 1 to 924       924/931
(99 %)
22 diff
(97.7 %id)
BJ993013 hepatoblastoma .e 422 to 904 1 to 483       483/483
(100 %)
0 diff
(100 %id)
BP252388 Kidney .e 465 to 1047 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_154162701   .e 487 to 1212 62 to 792       731/1224
(59 %)
23 diff
(98.2 %id)
AY182755   .e 496 to 624 1 to 129       129/129
(100 %)
1 diff
(99.3 %id)
CN483482 eye .e 702 to 1292 1 to 591       591/591
(100 %)
0 diff
(100 %id)
BU158498 large cell carcinoma, lung .e 788 to 1661 1 to 881       881/895
(98 %)
15 diff
(98.4 %id)
BM820201 stomach .e 794 to 1369 1 to 576       576/576
(100 %)
0 diff
(100 %id)
CN481303 eye .e 803 to 1413 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BM708362 eye, RPE and Choroid .e 1054 to 1587 1 to 534   fully sequenced,   534/534
(100 %)
0 diff
(100 %id)
BX399372 Placenta Cot 25-normalized .e 1099 to 2182 1069 to 1       1069/1091
(97 %)
37 diff
(96.7 %id)
BM555065 duodenal adenocarcinoma, cell line, small intestine .e 1129 to 2048 1 to 927       927/1055
(87 %)
15 diff
(98.6 %id)
CF454049 peripheral nervous system .e 1202 to 1933 1 to 732       732/733
(99 %)
1 diff
(99.9 %id)
CB105436 Liver .e 1215 to 1845 1 to 631       631/631
(100 %)
0 diff
(100 %id)
BQ880824 dorsal root ganglia .e 1292 to 2169 1 to 885       885/894
(98 %)
10 diff
(98.9 %id)
BM767536 Ascites, stomach .e 1317 to 1936 1 to 620       620/620
(100 %)
0 diff
(100 %id)
BM694442 eye, RPE and Choroid .e 1332 to 1922 1 to 591       591/591
(100 %)
0 diff
(100 %id)
TI_149296920   .e 1352 to 2208 924 to 78   AAA   847/920
(92 %)
17 diff
(98.2 %id)
TI_154107218   .e 1363 to 2208 924 to 86   AAA   839/960
(87 %)
17 diff
(98.3 %id)
BQ689191 ductal carcinoma, cell line, Pancreas .e 1428 to 2208 1 to 782   AAA   782/782
(100 %)
2 diff
(99.8 %id)
BQ027050 Chondrosarcoma, Left Pubic Bone .e 1442 to 2216 790 to 19   AAA   772/772
(100 %)
3 diff
(99.7 %id)
BM689243 eye, eye anterior segment .e 1444 to 1882 9 to 447   fully sequenced,   439/447
(98 %)
0 diff
(100 %id)
CA310058 Bone, Enchondroma cell line .e 1449 to 2208 777 to 19   AAA   759/759
(100 %)
1 diff
(99.9 %id)
CA446987 Chondrosarcoma, Left Pubic Bone .e 1457 to 2208 769 to 19   AAA   751/751
(100 %)
1 diff
(99.9 %id)
CA419260 Bone, Human Chondrosarcoma Cell Line .e 1460 to 2215 773 to 19   AAA   755/755
(100 %)
2 diff
(99.8 %id)
BM982071 lung, Primary Lung Cystic Fibrosis EpithelialCells .e 1463 to 2208 762 to 19   AAA   744/745
(99 %)
2 diff
(99.8 %id)
CA422258 Bone, Enchondroma cell line .e 1469 to 2208 757 to 19   AAA   739/739
(100 %)
1 diff
(99.9 %id)
BU632029 cell lines, Chondrosarcoma .e 1534 to 2208 693 to 19   AAA   675/675
(100 %)
2 diff
(99.8 %id)
BU732117 eye, RPE and Choroid .e 1557 to 2208 669 to 19   fully sequenced, AAA   651/651
(100 %)
0 diff
(100 %id)
CR593985 Placenta Cot 25-normalized .e 1738 to 2202 1 to 465       465/465
(100 %)
0 diff
(100 %id)
BJ993014 hepatoblastoma .e 1819 to 2194 376 to 1       376/376
(100 %)
2 diff
(99.5 %id)
BM662611 eye, eye anterior segment .e 1852 to 2208 375 to 19   fully sequenced, AAA   357/357
(100 %)
1 diff
(99.8 %id)
DA892394 rectum .f 1 to 525 2 to 526   tiling clone, capped   525/525
(100 %)
0 diff
(100 %id)
BM763676 myeloma .f 389 to 975 1 to 587   tiling clone,   587/587
(100 %)
2 diff
(99.7 %id)
DA950392 Spleen .f 802 to 1373 2 to 574   tiling clone, capped   573/574
(99 %)
2 diff
(99.7 %id)
DA916398 small intestine .f 1315 to 1876 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB120648 thymus .f 1335 to 1899 2 to 566   tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
DC406583 thymus .g 1 to 547 2 to 549   tiling clone,   549/549
(100 %)
1 diff
(99.9 %id)
AK308061   .g 62 to 1588 1 to 1526 H63R N293T L295F Q296R K297S ... tiling clone,   1526/1526
(100 %)
6 diff
(99.7 %id)
DC429321   .g 62 to 614 1 to 553       553/553
(100 %)
5 diff
(99.1 %id)
DC387031   .g 62 to 614 1 to 554       554/554
(100 %)
3 diff
(99.5 %id)
DB148571 thymus .h 1 to 258 2 to 260   tiling clone, capped   259/259
(100 %)
1 diff
(99.7 %id)
BC037417 Cervix, carcinoma .h 28 to 3065 12 to 3049 T363A tiling clone, available from MGC, AAA   3038/3038
(100 %)
1 diff
(100.0 %id)
BI260599 cervical carcinoma cell line, cervix .h 28 to 711 1 to 674   available from MGC,   674/675
(99 %)
36 diff
(94.7 %id)
DA451828 tongue, tumor tissue .h 217 to 719 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
BG900212 cartilage .h 416 to 847 77 to 509       433/440
(98 %)
6 diff
(98.7 %id)
DB274333 uterus .h 551 to 1109 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BE266389 lung, small cell carcinoma .h 742 to 1409 1 to 669       669/670
(99 %)
6 diff
(99.2 %id)
DA594619 lung .h 756 to 1249 2 to 500   capped   499/499
(100 %)
5 diff
(99.0 %id)
DC312457 alzheimer cortex .i 1 to 459 2 to 460   tiling clone,   460/460
(100 %)
2 diff
(99.6 %id)
AK298729   .i 32 to 1507 1 to 1476 exact tiling clone,   1476/1476
(100 %)
2 diff
(99.9 %id)
DC429248   .i 32 to 602 1 to 571       571/571
(100 %)
0 diff
(100 %id)
DA677338   .j 1 to 594 2 to 595   tiling clone, capped   594/594
(100 %)
0 diff
(100 %id)
BQ881180 dorsal root ganglia .j 185 to 1056 1 to 881       881/915
(96 %)
19 diff
(98.0 %id)
BP424021 small intestine .j 201 to 666 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
CR597821 T cells (Jurkat cell line) .j 547 to 1781 1 to 1235   tiling clone,   1235/1235
(100 %)
0 diff
(100 %id)
AU117362 whole embryo, mainly head .j 569 to 1349 2 to 788   capped   787/888
(88 %)
16 diff
(98.2 %id)
BM742388 Ascites, stomach .j 591 to 1259 1 to 669       669/669
(100 %)
0 diff
(100 %id)
BM791206 stomach .j 599 to 1200 1 to 602       602/602
(100 %)
0 diff
(100 %id)
CD672265 eye, Iris .j 606 to 1227 1 to 622       622/622
(100 %)
0 diff
(100 %id)
CR622520 Neuroblastoma Cot 10-normalized .j 618 to 1609 1 to 992       992/992
(100 %)
0 diff
(100 %id)
CD672634 eye, Iris .j 625 to 1224 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BG035257 adenocarcinoma, cell line, Liver .j 630 to 1266 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
CD672264 eye, Iris .j 1278 to 1809 548 to 17   tiling clone, AAA   532/532
(100 %)
0 diff
(100 %id)
BX394822 Neuroblastoma Cot 25-normalized .k 1 to 921 2 to 915   tiling clone,   915/915
(100 %)
12 diff
(98.7 %id)
BX394821 Neuroblastoma Cot 25-normalized .k 942 to 2051 1106 to 7   tiling clone,   1100/1107
(99 %)
14 diff
(98.8 %id)
BG677121 skin, squamous cell carcinoma .l 1 to 843 1 to 849 V14G L15A L16P E17G L18A ... tiling clone,   849/929
(91 %)
24 diff
(97.5 %id)
BI766980 pooled lung and spleen .m 1 to 815 3 to 823   tiling clone,   822/823
(99 %)
12 diff
(98.6 %id)
TI_57178714   .m 1 to 815 39 to 859       822/859
(95 %)
16 diff
(98.2 %id)
EU927389   .m 161 to 1499 1 to 1339 exact tiling clone,   1339/1339
(100 %)
0 diff
(100 %id)
AW198031 adenocarcinoma, Pancreas .m 734 to 1070 1 to 342     Submitted on the opposite strand 342/342
(100 %)
7 diff
(98.0 %id)
AI612802 serous papillary carcinoma, high grade, 2pooled tumors, uterus .m 739 to 1196 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
BQ933237 sciatic nerve .m 979 to 1588 322 to 929       608/929
(65 %)
5 diff
(99.5 %id)
CR744722 colon, colonic mucosa from 5 ulcerative colitispatients .m 983 to 1435 1 to 453       453/453
(100 %)
0 diff
(100 %id)
BQ772378 Chondrosarcoma Cell line .m 1049 to 1653 621 to 19   tiling clone, AAA   603/603
(100 %)
3 diff
(99.6 %id)
DB119003 thymus .m 1051 to 1551 41 to 541   capped   501/540
(92 %)
6 diff
(98.9 %id)
AW293188   .m 1220 to 1653 451 to 18   AAA   434/434
(100 %)
4 diff
(99.1 %id)
BG289285 bladder, transitional cell papilloma, cell line .n 1 to 751 1 to 757   tiling clone,   757/909
(83 %)
18 diff
(98.1 %id)
BX483172   .n 658 to 1165 1 to 508   tiling clone,   508/508
(100 %)
1 diff
(99.9 %id)
DA673735   .o 1 to 585 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
BM705174 eye, RPE and Choroid .o 408 to 982 1 to 575   tiling clone,   575/575
(100 %)
1 diff
(99.9 %id)
BP254302 Kidney .p 1 to 585 1 to 585 G183X tiling clone,   585/585
(100 %)
0 diff
(100 %id)
DB218945 trachea .q 1 to 553 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DB063714 testis .q 26 to 546 2 to 522   capped   521/521
(100 %)
3 diff
(99.5 %id)
BQ325960 colon_ins .q 136 to 704 1 to 566       566/567
(99 %)
27 diff
(95.3 %id)
BF815689 colon_ins .q 146 to 698 45 to 596   tiling clone,   552/596
(92 %)
6 diff
(99.0 %id)
BG958224 colon .q 302 to 466 6 to 174       169/176
(96 %)
13 diff
(92.7 %id)
AW858948 colon .q 484 to 763 281 to 1       281/282
(99 %)
8 diff
(97.2 %id)
DA634466 Kidney .q 665 to 1226 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DB011774 esophageal, tumor tissue .q 823 to 1393 2 to 572   tiling clone, capped   571/571
(100 %)
2 diff
(99.7 %id)
DA589995 lung .q 1182 to 1734 8 to 561   tiling clone, capped   554/560
(98 %)
7 diff
(98.8 %id)
DA857545 placenta .r 1 to 532 2 to 533   tiling clone, capped   532/532
(100 %)
0 diff
(100 %id)
DB089008 testis .r 41 to 591 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DB207282 trachea .s 1 to 631 2 to 632 H150A S151Q S152F W153L Y155V ... tiling clone, capped   631/631
(100 %)
3 diff
(99.6 %id)
CA488506   .t 1 to 401 1 to 400   tiling clone,   400/400
(100 %)
4 diff
(99.0 %id)
BI116416 lung, small cell carcinoma .t 109 to 690 1 to 597 P117A S123C S130L P131S A132E ...     597/599
(99 %)
37 diff
(93.9 %id)
BP329453 rectum .t 116 to 656 1 to 544       544/582
(93 %)
8 diff
(98.7 %id)
BU185157 ductal carcinoma, cell line, Pancreas .t 123 to 882 20 to 787   tiling clone,   768/1112
(69 %)
53 diff
(95.3 %id)
BU150531 ductal carcinoma, cell line, Pancreas .t 129 to 747 1 to 617       617/940
(65 %)
12 diff
(98.8 %id)
BQ686969 ductal carcinoma, cell line, Pancreas .t 130 to 616 1 to 487       487/1092
(44 %)
20 diff
(98.2 %id)
CF146768 CNCAP(3)T-225 cell line, Prostate .t 133 to 747 9 to 623       615/623
(98 %)
8 diff
(98.8 %id)
TI_154179289   .t 133 to 980 76 to 916   tiling clone,   841/861
(97 %)
27 diff
(96.9 %id)
BG982599 colon_normal .t 158 to 502 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
BG982598 colon_normal .t 162 to 502 341 to 1       341/341
(100 %)
2 diff
(99.5 %id)
BM006411 ductal carcinoma, cell line, Pancreas .t 164 to 452 1 to 290       290/398
(72 %)
4 diff
(99.0 %id)
CA454219   .t 174 to 997 1 to 839   tiling clone,   839/896
(93 %)
32 diff
(96.5 %id)
BP223114 colon mucosa .t 210 to 875 1 to 673   tiling clone,   673/721
(93 %)
16 diff
(97.8 %id)
BE740649 adenocarcinoma cell line, ovary .t 214 to 742 1 to 527   tiling clone,   527/527
(100 %)
2 diff
(99.7 %id)
BM007225 ductal carcinoma, cell line, Pancreas .t 1100 to 1585 492 to 3   tiling clone,   490/492
(99 %)
0 diff
(100 %id)
BP291584 lung .u 1 to 583 1 to 583 S151F G158R tiling clone,   583/583
(100 %)
4 diff
(99.4 %id)
AA595839 Prostate, prostatic intraepithelial neoplasia - highgrade .va-u 1 to 334 340 to 7   tiling clone,   334/340
(98 %)
0 diff
(100 %id)
TI_159719138   .va-u 6 to 947 975 to 43 G9A S10A Q11S W12G F16S ... tiling clone,   933/1040
(89 %)
0 diff
(100 %id)
DB190740 lung, tumor tissue .vb 1 to 568 2 to 569 G80A tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
BF804908 colon_ins .vc 1 to 375 376 to 2 T107A P112G tiling clone, Submitted on the opposite strand 375/376
(99 %)
0 diff
(100 %id)
DB234110 trachea .vd 1 to 560 7 to 566 exact tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
BP356270   .ve 1 to 581 1 to 582 E104G I105D S106L S107F C108L ... tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
AW605213 denis_drash .vf 1 to 315 1 to 315 exact tiling clone,   315/315
(100 %)
0 diff
(100 %id)
DB192997 ovary, tumor tissue .vg 1 to 574 2 to 575 exact tiling clone, capped   574/576
(99 %)
1 diff
(99.9 %id)
DA652413   .vg 24 to 589 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA574232   .vg 35 to 587 2 to 554 exact capped   553/553
(100 %)
0 diff
(100 %id)
DA712624   .vg 35 to 593 2 to 563 exact capped   562/562
(100 %)
3 diff
(99.5 %id)
DA879557 Prostate .vg 35 to 556 2 to 523 exact capped   522/522
(100 %)
0 diff
(100 %id)
DB198882 trachea .vg 35 to 593 2 to 560 exact capped   559/559
(100 %)
1 diff
(99.9 %id)
DB259791 uterus .vg 53 to 623 2 to 572 exact capped   571/571
(100 %)
2 diff
(99.7 %id)
DA675357   .vg 75 to 652 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA712649   .vg 75 to 641 2 to 570 exact capped   569/569
(100 %)
2 diff
(99.7 %id)
DA717787   .vg 75 to 649 2 to 577 exact capped   576/576
(100 %)
1 diff
(99.9 %id)
DA036342 breast .vg 76 to 647 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA541563 lung .vg 78 to 665 2 to 589 exact capped   588/588
(100 %)
3 diff
(99.5 %id)
DA764222 tongue .vg 84 to 653 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA873285 Prostate .vg 84 to 650 2 to 568 exact capped   567/567
(100 %)
2 diff
(99.7 %id)
DC301473   .vg 106 to 687 1 to 582 exact tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
DC415617 trachea .vh -8 to 535 1 to 544 exact tiling clone,   544/544
(100 %)
1 diff
(99.9 %id)
DB220823 trachea .vi 1 to 574 2 to 575 exact tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
BQ335375 marrow .vi 412 to 978 1 to 568   tiling clone,   568/568
(100 %)
8 diff
(98.6 %id)
DA875749 Prostate .vj 1 to 506 2 to 507 exact tiling clone, capped   506/506
(100 %)
1 diff
(99.9 %id)
DA669727 esophagus .vj 12 to 506 2 to 496 exact tiling clone, capped   495/495
(100 %)
0 diff
(100 %id)
DA161622 amygdala .vj 39 to 554 2 to 517 exact tiling clone, capped   516/516
(100 %)
2 diff
(99.7 %id)
W76627 heart .vj 348 to 599 1 to 258   tiling clone,   258/296
(87 %)
3 diff
(99.0 %id)
W73019 heart .vj 611 to 907 294 to 3   tiling clone,   292/299
(97 %)
0 diff
(100 %id)
DA595627 lung .vk 1 to 470 2 to 471   capped   470/470
(100 %)
0 diff
(100 %id)
DB222673 trachea .vk 1 to 539 2 to 540   tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
DB223223 trachea .vk 1 to 515 2 to 516   capped   515/515
(100 %)
0 diff
(100 %id)
CN413860 embryonic stem cells, cell lines H1, H7, andH9 .vk 43 to 458 1 to 417       417/417
(100 %)
2 diff
(99.6 %id)
DB221177 trachea .vk 61 to 625 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB228358 trachea .vk 61 to 611 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB240378 trachea .vk 61 to 641 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB240385 trachea .vk 61 to 639 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA871086 Prostate .vk 72 to 636 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB231477 trachea .vk 75 to 647 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB238408 trachea .vk 78 to 679 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DB158258 thymus .vk 226 to 817 2 to 593 exact tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
DA446276 tongue, tumor tissue .vk 229 to 796 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DB213333 trachea .vk 231 to 767 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA453039 tongue, tumor tissue .vk 238 to 794 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB196042 trachea .vk 238 to 727 2 to 491   capped   490/490
(100 %)
0 diff
(100 %id)
DB139462 thymus .vl-u 1 to 538 5 to 542   tiling clone, capped   541/541
(100 %)
2 diff
(99.7 %id)
DB141776 thymus .vl-u 14 to 500 2 to 490   capped   489/489
(100 %)
2 diff
(99.6 %id)
DA448848 tongue, tumor tissue .vl-u 49 to 599 2 to 552 exact capped   551/551
(100 %)
1 diff
(99.9 %id)
DB230168 trachea .vl-u 54 to 532 2 to 481   capped   480/480
(100 %)
3 diff
(99.4 %id)
BP286278 lung .vl-u 62 to 644 1 to 583 exact     583/583
(100 %)
1 diff
(99.9 %id)
BP279077   .vl-u 66 to 658 1 to 593 exact tiling clone,   593/593
(100 %)
1 diff
(99.9 %id)
DC389164 Spleen .vm 1 to 578 1 to 578 S12G tiling clone,   578/578
(100 %)
1 diff
(99.9 %id)
BF902676 marrow .vm 2 to 370 8 to 374       367/376
(97 %)
9 diff
(97.7 %id)
DB221848 trachea .vn 1 to 530 2 to 531 exact tiling clone, capped   530/530
(100 %)
0 diff
(100 %id)
BQ368679 placenta_normal .vo-u 1 to 274 22 to 288   tiling clone,   267/289
(92 %)
10 diff
(96.6 %id)
BE161673 head_neck Gene SCNN1AandTNFRSF1A, variant not shown         Submitted on the opposite strand    
185 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va-u, .vb, .vc, .vd, .ve, .vf, .vg, .vh, .vi, .vj, .vk, .vl-u, .vm, .vn, .vo-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI