To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene SCDTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
473 supporting clones for gene SCD back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
TI_44347956   .a 1 to 570 128 to 702   tiling clone,   575/703
(81 %)
13 diff
(98.2 %id)
BM563325 brain, medulla .a 39 to 843 20 to 838   tiling clone,   819/1238
(66 %)
31 diff
(97.5 %id)
TI_57173192   .a 385 to 1132 28 to 781       754/781
(96 %)
12 diff
(98.5 %id)
NM_005063.4   .a 385 to 5857 1 to 5473 exact RefSeq,   5473/5473
(100 %)
5 diff
(100.0 %id)
TI_44165630   .a 478 to 1185 144 to 846       703/875
(80 %)
14 diff
(98.4 %id)
DB494634 hypothalamus .a 480 to 996 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
TI_45211679   .a 480 to 1159 87 to 764       678/764
(88 %)
11 diff
(98.6 %id)
CD657327 Embryonic Stem cells .a 488 to 1273 4 to 785       782/788
(99 %)
11 diff
(98.7 %id)
BM451306 eye, retinoblastoma .a 498 to 1451 1 to 968   tiling clone,   968/1024
(94 %)
22 diff
(97.9 %id)
CD619732   .a 503 to 1010 505 to 1       505/510
(99 %)
18 diff
(96.5 %id)
CD619734   .a 507 to 840 335 to 2       334/335
(99 %)
0 diff
(100 %id)
AK312312 cerebellum .a 603 to 1954 1 to 1352 exact     1352/1352
(100 %)
0 diff
(100 %id)
AB208982 brain .a 628 to 2841 1 to 2214 M224L     2214/2214
(100 %)
1 diff
(100.0 %id)
AF097514 liver; brain; adipose; scalp skin; foreskinkeratinocytes .a 640 to 5845 1 to 5206 M224L tiling clone, AAA   5206/5206
(100 %)
6 diff
(99.9 %id)
AL521745 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 664 to 1517 1 to 854       854/854
(100 %)
0 diff
(100 %id)
Y13647 Liver .a 667 to 2111 1 to 1445 S25P R26G T320N C326W A333T AAA   1445/1445
(100 %)
8 diff
(99.5 %id)
AK222862 Liver .a 668 to 1957 1 to 1290 H269L     1290/1290
(100 %)
2 diff
(99.9 %id)
BC005807 Placenta, choriocarcinoma .a 698 to 1944 1 to 1247   available from MGC, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 1247/1314
(94 %)
2 diff
(99.9 %id)
TI_44166655   .a 721 to 1396 89 to 765       677/765
(88 %)
18 diff
(97.7 %id)
TI_44166011   .a 747 to 1516 91 to 867       777/868
(89 %)
16 diff
(98.2 %id)
CD619740   .a 829 to 908 170 to 89       82/95
(86 %)
6 diff
(93.7 %id)
CD619742   .a 829 to 998 164 to 1       164/164
(100 %)
12 diff
(92.7 %id)
CD619743   .a 829 to 998 17 to 181       165/181
(91 %)
13 diff
(92.9 %id)
AA627503 colon, colon tumor RER+ .a 881 to 1006 127 to 2       126/127
(99 %)
1 diff
(99.3 %id)
TI_44167255   .a 902 to 1613 98 to 811       714/937
(76 %)
31 diff
(96.7 %id)
AF116616 Liver .a 908 to 2243 1336 to 1   tiling clone, Submitted on the opposite strand 1336/1649
(81 %)
0 diff
(100 %id)
BF088843 head_neck .a 922 to 1315 399 to 8       392/399
(98 %)
2 diff
(99.5 %id)
TI_57193034   .a 971 to 1833 55 to 916       862/864
(99 %)
12 diff
(98.7 %id)
BI861252 breast, mammary adenocarcinoma, cell line .a 972 to 1833 1 to 861       861/863
(99 %)
12 diff
(98.7 %id)
BE818198 breast_normal .a 983 to 1240 268 to 11       258/268
(96 %)
0 diff
(100 %id)
BM801704 duodenal adenocarcinoma, cell line, small intestine .a 1023 to 1913 1 to 892       892/893
(99 %)
3 diff
(99.7 %id)
BQ311696 breast_normal .a 1083 to 1569 489 to 4       486/489
(99 %)
2 diff
(99.6 %id)
CV418168 nervous_tumor .a 1135 to 1563 431 to 2     Submitted on the opposite strand 430/431
(99 %)
4 diff
(99.1 %id)
CV418170 nervous_tumor .a 1185 to 1549 366 to 1     Submitted on the opposite strand 366/366
(100 %)
3 diff
(99.2 %id)
CV418172 nervous_tumor .a 1185 to 1568 387 to 4     Submitted on the opposite strand 384/387
(99 %)
0 diff
(100 %id)
CV365386 bladder_tumor .a 1187 to 1559 378 to 4     Submitted on the opposite strand 375/378
(99 %)
2 diff
(99.5 %id)
DN913824   .a 1308 to 1796 489 to 1       489/489
(100 %)
2 diff
(99.6 %id)
BM480326 duodenal adenocarcinoma, cell line, small intestine .a 1330 to 2238 1 to 917       917/1022
(89 %)
34 diff
(96.7 %id)
BM666656.
matches multiple genes
eye, optic nerve .a 1428 to 2111 701 to 19   AAA also hits gene SCDP1 683/683
(100 %)
2 diff
(99.8 %id)
DN918348   .a 1440 to 2115 673 to 1       673/674
(99 %)
7 diff
(99.0 %id)
BE698471 uterus_tumor .a 1514 to 1828 314 to 1       314/315
(99 %)
7 diff
(97.8 %id)
BE765467 nervous_tumor .a 1514 to 1759 283 to 38       246/288
(85 %)
0 diff
(100 %id)
BE766154 nervous_tumor .a 1522 to 1793 274 to 2       273/274
(99 %)
2 diff
(99.3 %id)
BG291442 bladder, transitional cell papilloma, cell line .a 1547 to 2359 1 to 831       831/879
(94 %)
36 diff
(96.0 %id)
BQ353308 head_neck .a 1559 to 2059 501 to 1       501/501
(100 %)
1 diff
(99.9 %id)
AA933734 pooled germ cell tumors .a 1580 to 1867 289 to 2       288/289
(99 %)
17 diff
(94.2 %id)
DN915083   .a 1601 to 2115 515 to 1       515/515
(100 %)
0 diff
(100 %id)
EC469976 Prostate .a 1608 to 1701 95 to 1       95/95
(100 %)
1 diff
(99.0 %id)
DN915231   .a 1631 to 2116 486 to 1       486/486
(100 %)
0 diff
(100 %id)
BE081875 breast .a 1640 to 1770 1 to 133       131/133
(98 %)
9 diff
(93.3 %id)
CV419450 colon_ins .a 1648 to 2174 530 to 2     Submitted on the opposite strand 529/530
(99 %)
0 diff
(100 %id)
DN918884   .a 1663 to 2115 453 to 1       453/453
(100 %)
4 diff
(99.2 %id)
AI065157 Liver .a 1676 to 2243 568 to 1       568/568
(100 %)
1 diff
(99.9 %id)
BE698786 uterus_tumor .a 1708 to 2060 1 to 357       357/357
(100 %)
27 diff
(92.5 %id)
BF802006 colon_ins .a 1716 to 2015 302 to 4     Submitted on the opposite strand 299/302
(99 %)
4 diff
(98.7 %id)
BQ322336 colon_est .a 1731 to 2212 481 to 1       481/481
(100 %)
15 diff
(96.9 %id)
CD245516 White Matter .a 1734 to 2570 1 to 846       846/847
(99 %)
11 diff
(98.8 %id)
TI_154166669   .a 1846 to 2617 80 to 861       782/786
(99 %)
17 diff
(97.9 %id)
AL598787   .a 1953 to 2732 1 to 780       780/780
(100 %)
0 diff
(100 %id)
BE699084 nervous_normal .a 1991 to 2628 643 to 6       638/694
(91 %)
0 diff
(100 %id)
BQ335416 marrow .a 1996 to 2384 413 to 27       387/413
(93 %)
12 diff
(97.1 %id)
BE699086 nervous_normal .a 2147 to 2617 488 to 1       488/488
(100 %)
27 diff
(94.5 %id)
BU556807 ovary, teratocarcinoma, cell line .a 2201 to 3109 1 to 923       923/933
(98 %)
17 diff
(98.2 %id)
BF083275 colon .a 2277 to 2789 510 to 2       509/510
(99 %)
0 diff
(100 %id)
BE548878 cervical carcinoma cell line, cervix .a 2301 to 2461 161 to 1     Submitted on the opposite strand 161/161
(100 %)
0 diff
(100 %id)
BJ996232 hepatoblastoma .a 2304 to 2842 1 to 539       539/539
(100 %)
0 diff
(100 %id)
BF924709 nervous_tumor .a 2377 to 2979 603 to 1     Submitted on the opposite strand 603/603
(100 %)
13 diff
(97.9 %id)
TI_57230146   .a 2454 to 3030 81 to 661       581/581
(100 %)
12 diff
(98.0 %id)
BM455549 lymph, lymphoma, cell line .a 2508 to 3435 1 to 932       932/1018
(91 %)
15 diff
(98.6 %id)
DB565685 hypothalamus .a 2524 to 2985 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
BF833490 head_neck .a 2581 to 3019 442 to 4     Submitted on the opposite strand 439/442
(99 %)
0 diff
(100 %id)
DA737118   .a 2589 to 3417 2 to 829   capped   828/828
(100 %)
7 diff
(99.2 %id)
TI_154170835   .a 2591 to 3138 87 to 639       553/1212
(45 %)
9 diff
(99.3 %id)
AL524361 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 2621 to 3512 1 to 892       892/892
(100 %)
1 diff
(99.9 %id)
BQ878918 dorsal root ganglia .a 2640 to 3465 1 to 830       830/921
(90 %)
6 diff
(99.4 %id)
CV809106 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2647 to 3512 1 to 877       877/896
(97 %)
33 diff
(96.4 %id)
AF109362 aorta .a 2661 to 4640 1 to 1984   tiling clone, AAA   1984/1984
(100 %)
10 diff
(99.5 %id)
TI_149284269   .a 2750 to 3362 60 to 672     Submitted on the opposite strand 613/902
(67 %)
6 diff
(99.4 %id)
TI_149283493   .a 2761 to 3447 61 to 747     Submitted on the opposite strand 687/810
(84 %)
12 diff
(98.6 %id)
BU680441 lung, Primary Lung Epithelial Cells .a 2765 to 3362 1 to 598     Submitted on the opposite strand 598/604
(99 %)
5 diff
(99.2 %id)
BM984118 lung, Primary Lung Epithelial Cells .a 2766 to 3412 1 to 646     Submitted on the opposite strand 646/646
(100 %)
5 diff
(99.3 %id)
BU607494 Human Lung Epithelial cells, lung .a 2766 to 3103 1 to 337     Submitted on the opposite strand 337/346
(97 %)
2 diff
(99.5 %id)
EC519335 Prostate .a 2816 to 2912 97 to 1       97/97
(100 %)
0 diff
(100 %id)
EC562325 Prostate .a 2816 to 2912 96 to 1       96/96
(100 %)
1 diff
(99.0 %id)
TI_43960870   .a 2830 to 3633 60 to 865       806/868
(92 %)
20 diff
(97.7 %id)
BU856782 adenocarcinoma, cell line, breast .a 2847 to 3716 1 to 871       871/909
(95 %)
4 diff
(99.6 %id)
BU955853 adenocarcinoma, cell line, breast .a 2847 to 3683 1 to 848       848/933
(90 %)
23 diff
(97.6 %id)
DB474061 hippocampus .a 2874 to 3377 1 to 504       504/504
(100 %)
0 diff
(100 %id)
TI_149305491   .a 2886 to 3576 59 to 749     Submitted on the opposite strand 691/1078
(64 %)
4 diff
(99.7 %id)
TI_149307522   .a 2886 to 3576 58 to 748     Submitted on the opposite strand 691/1058
(65 %)
17 diff
(98.4 %id)
BF034323 adenocarcinoma, ovary .a 2928 to 3611 694 to 1     Submitted on the opposite strand 694/852
(81 %)
16 diff
(98.2 %id)
BU859510 ovary, teratocarcinoma, cell line .a 2928 to 3770 1 to 845       845/845
(100 %)
4 diff
(99.6 %id)
BF840184 head_neck .a 2940 to 3150 213 to 1     Submitted on the opposite strand 213/230
(92 %)
12 diff
(94.8 %id)
AW945590 lung_normal .a 2978 to 3161 185 to 1     Submitted on the opposite strand 185/199
(92 %)
14 diff
(93.0 %id)
AW945662 lung_normal .a 2978 to 3097 121 to 2     Submitted on the opposite strand 120/128
(93 %)
0 diff
(100 %id)
BU184552 melanotic melanoma, cell line, skin .a 2979 to 3875 1 to 899       899/900
(99 %)
9 diff
(99.0 %id)
BU174440 melanotic melanoma, cell line, skin .a 2979 to 3802 1 to 836       836/897
(93 %)
16 diff
(98.3 %id)
BQ677664 melanotic melanoma, cell line, skin .a 2979 to 3816 1 to 845       845/936
(90 %)
22 diff
(97.7 %id)
BQ679014 melanotic melanoma, cell line, skin .a 2979 to 3783 1 to 807       807/963
(83 %)
9 diff
(99.1 %id)
BU149747 ductal carcinoma, cell line, Pancreas .a 2992 to 3872 1 to 889       889/897
(99 %)
19 diff
(97.9 %id)
BQ879564 ductal carcinoma, cell line, Pancreas .a 2992 to 3852 1 to 868       868/898
(96 %)
11 diff
(98.8 %id)
BQ684906 ductal carcinoma, cell line, Pancreas .a 2992 to 3911 1 to 924       924/925
(99 %)
7 diff
(99.3 %id)
BQ686000 ductal carcinoma, cell line, Pancreas .a 2992 to 3914 1 to 922       922/923
(99 %)
11 diff
(98.9 %id)
CX873069 embryonic stem .a 2998 to 3784 1 to 787       787/787
(100 %)
0 diff
(100 %id)
BE082788 breast .a 3013 to 3552 540 to 1     Submitted on the opposite strand 540/540
(100 %)
5 diff
(99.1 %id)
BI030335 marrow .a 3042 to 3533 491 to 1       491/491
(100 %)
2 diff
(99.6 %id)
BU174390 ductal carcinoma, cell line, Pancreas .a 3075 to 3943 1 to 869       869/871
(99 %)
3 diff
(99.7 %id)
BQ066815 lymph, lymphoma, cell line .a 3085 to 4104 1 to 1027       1027/1027
(100 %)
29 diff
(97.2 %id)
TI_59381459   .a 3118 to 3957 104 to 945       842/927
(90 %)
38 diff
(96.0 %id)
BU542853 carcinoma, cell line, Prostate .a 3124 to 3970 1 to 855       855/858
(99 %)
8 diff
(99.1 %id)
BM452687 lymph, lymphoma, cell line .a 3127 to 4083 1 to 970       970/1054
(92 %)
28 diff
(97.4 %id)
CX785327 human embryonic stem cells .a 3128 to 3931 1 to 804       804/804
(100 %)
0 diff
(100 %id)
BU526922 epidermoid carcinoma, cell line, lung .a 3129 to 4044 1 to 926       926/926
(100 %)
26 diff
(97.2 %id)
BQ893470 melanotic melanoma, cell line, skin .a 3137 to 4030 1 to 897       897/899
(99 %)
10 diff
(98.9 %id)
BU174356 melanotic melanoma, cell line, skin .a 3142 to 3997 1 to 863       863/911
(94 %)
18 diff
(98.1 %id)
BU839057 melanotic melanoma, cell line, skin .a 3142 to 3985 1 to 847       847/929
(91 %)
32 diff
(96.6 %id)
BU168708 melanotic melanoma, cell line, skin .a 3142 to 3985 1 to 852       852/864
(98 %)
15 diff
(98.3 %id)
BY996241   .a 3143 to 3791 3 to 651       649/651
(99 %)
5 diff
(99.3 %id)
BY994290   .a 3149 to 3809 10 to 670       661/670
(98 %)
6 diff
(99.2 %id)
BY996285   .a 3149 to 3781 21 to 653       633/653
(96 %)
6 diff
(99.1 %id)
BY993805   .a 3150 to 3792 10 to 652       643/652
(98 %)
6 diff
(99.1 %id)
BQ071155 brain, neuroblastoma, cell line .a 3169 to 4025 1 to 860       860/968
(88 %)
11 diff
(98.9 %id)
AW753081 colon .a 3174 to 3776 602 to 1       602/642
(93 %)
15 diff
(97.7 %id)
CX872145 embryonic stem .a 3187 to 3981 1 to 795       795/795
(100 %)
0 diff
(100 %id)
AW361001 colon .a 3189 to 3751 562 to 1       562/566
(99 %)
18 diff
(96.9 %id)
TI_59381230   .a 3196 to 4016 105 to 924       820/868
(94 %)
38 diff
(95.7 %id)
BE091425 breast .a 3197 to 3547 355 to 14     Submitted on the opposite strand 342/363
(94 %)
0 diff
(100 %id)
TI_45133447   .a 3199 to 4114 62 to 973       912/927
(98 %)
35 diff
(96.3 %id)
BI033856 nervous_normal .a 3207 to 3570 364 to 1       364/364
(100 %)
3 diff
(99.2 %id)
BM702527 eye, human retina .a 3223 to 3842 1 to 619       619/619
(100 %)
2 diff
(99.7 %id)
BQ674653 epidermoid carcinoma, cell line, salivary gland .a 3235 to 4055 1 to 827       827/956
(86 %)
24 diff
(97.5 %id)
BM724343 eye, fetal eye .a 3241 to 3602 1 to 363       363/363
(100 %)
3 diff
(99.2 %id)
AW852877 colon .a 3242 to 3771 559 to 35       525/562
(93 %)
0 diff
(100 %id)
BF743714 breast .a 3282 to 3554 275 to 3     Submitted on the opposite strand 273/276
(98 %)
0 diff
(100 %id)
BM697305 eye, lens .a 3305 to 3942 1 to 638       638/638
(100 %)
0 diff
(100 %id)
BM560448 astrocytoma grade IV, cell line, brain .a 3321 to 4089 1 to 787       787/1001
(78 %)
32 diff
(96.9 %id)
BM552335 astrocytoma grade IV, cell line, brain .a 3321 to 4165 1 to 849       849/1005
(84 %)
10 diff
(99.1 %id)
BM552649 astrocytoma grade IV, cell line, brain .a 3321 to 4272 1 to 970       970/1038
(93 %)
26 diff
(97.5 %id)
BM557648 astrocytoma grade IV, cell line, brain .a 3321 to 4233 1 to 922       922/991
(93 %)
16 diff
(98.4 %id)
BM557930 astrocytoma grade IV, cell line, brain .a 3321 to 4165 1 to 854       854/999
(85 %)
11 diff
(98.9 %id)
BM562946 astrocytoma grade IV, cell line, brain .a 3321 to 4233 1 to 924       924/1018
(90 %)
15 diff
(98.6 %id)
BM551997 astrocytoma grade IV, cell line, brain .a 3321 to 4221 1 to 926       926/1039
(89 %)
31 diff
(97.1 %id)
TI_59387474   .a 3321 to 3866 64 to 611       548/548
(100 %)
12 diff
(97.9 %id)
TI_59387600   .a 3321 to 4155 94 to 926       833/833
(100 %)
12 diff
(98.6 %id)
TI_59387697   .a 3321 to 4026 105 to 810       706/706
(100 %)
4 diff
(99.5 %id)
TI_59390056   .a 3321 to 4063 114 to 856       743/748
(99 %)
5 diff
(99.4 %id)
TI_59388638   .a 3322 to 3907 90 to 681       592/592
(100 %)
22 diff
(96.3 %id)
BQ438897 epithelioid carcinoma, Pancreas .a 3345 to 4214 1 to 883       883/887
(99 %)
13 diff
(98.6 %id)
CD619746   .a 3347 to 3842 513 to 14       500/513
(97 %)
7 diff
(98.7 %id)
BE732721 choriocarcinoma, placenta .a 3363 to 4157 1 to 789       789/939
(84 %)
19 diff
(98.0 %id)
TI_57196890   .a 3369 to 4225 30 to 885       856/885
(96 %)
6 diff
(99.4 %id)
BF949438 nervous_normal .a 3376 to 3715 353 to 13       341/378
(90 %)
0 diff
(100 %id)
BE694912 breast .a 3379 to 3737 363 to 4       360/373
(96 %)
0 diff
(100 %id)
BY997035   .a 3379 to 4022 10 to 653       644/653
(98 %)
6 diff
(99.1 %id)
TI_45212091   .a 3417 to 4198 86 to 867       782/867
(90 %)
6 diff
(99.4 %id)
TI_59393772   .a 3418 to 4297 95 to 979       885/929
(95 %)
29 diff
(96.9 %id)
TI_59382354   .a 3443 to 4287 103 to 943       841/869
(96 %)
25 diff
(97.2 %id)
BQ068775 brain, neuroblastoma, cell line .a 3444 to 4358 1 to 929       929/957
(97 %)
22 diff
(97.8 %id)
DA738254   .a 3447 to 4227 2 to 783   capped   782/782
(100 %)
2 diff
(99.8 %id)
BF850358 lung_normal .a 3460 to 3823 365 to 4     Submitted on the opposite strand 362/365
(99 %)
17 diff
(95.4 %id)
TI_59382335   .a 3460 to 4287 98 to 928       831/930
(89 %)
32 diff
(96.6 %id)
BQ340410 nervous_normal .a 3471 to 3750 280 to 1       280/280
(100 %)
3 diff
(99.0 %id)
BU556670 ovary, teratocarcinoma, cell line .a 3474 to 4378 1 to 912       912/943
(96 %)
20 diff
(97.9 %id)
BF954609 nervous_normal .a 3488 to 3725 243 to 6       238/278
(85 %)
0 diff
(100 %id)
BQ652775 hepatocellular carcinoma, cell line, Liver .a 3522 to 4376 872 to 18     Submitted on the opposite strand 855/984
(86 %)
0 diff
(100 %id)
BM917310 blood, natural killer cells, cell line .a 3523 to 4341 1 to 823       823/983
(83 %)
17 diff
(98.3 %id)
BQ924801 epidermoid carcinoma, cell line, lung .a 3577 to 4506 1 to 933       933/935
(99 %)
20 diff
(97.9 %id)
AA501922 Liver .a 3582 to 3649 1 to 68       68/68
(100 %)
1 diff
(98.6 %id)
BU845806 ovary, teratocarcinoma, cell line .a 3615 to 4530 1 to 922       922/925
(99 %)
12 diff
(98.8 %id)
DA734467   .a 3615 to 4092 2 to 477   capped   476/476
(100 %)
3 diff
(99.4 %id)
EC447981 Prostate .a 3629 to 3721 99 to 7       93/99
(93 %)
0 diff
(100 %id)
BU858263 adenocarcinoma, cell line, breast .a 3681 to 4521 1 to 846       846/875
(96 %)
16 diff
(98.2 %id)
AL524360 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 3687 to 4577 892 to 1       892/900
(99 %)
31 diff
(96.6 %id)
BQ052473 blood, natural killer cells, cell line .a 3703 to 4697 1 to 1013   AAA   1013/1087
(93 %)
55 diff
(95.0 %id)
AL562021 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .a 3709 to 4624 917 to 1       917/917
(100 %)
5 diff
(99.5 %id)
TI_154105548   .a 3717 to 4629 985 to 82   AAA   904/983
(91 %)
20 diff
(98.0 %id)
BE082447 breast .a 3732 to 4154 462 to 40     Submitted on the opposite strand 423/462
(91 %)
0 diff
(100 %id)
BM701241 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3742 to 4264 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
BM715814 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 3743 to 4566 1 to 823       823/823
(100 %)
3 diff
(99.7 %id)
TI_149311870   .a 3751 to 4640 958 to 85   AAA   874/959
(91 %)
21 diff
(97.9 %id)
AW993464 breast_normal .a 3756 to 4353 619 to 22     Submitted on the opposite strand 598/619
(96 %)
0 diff
(100 %id)
AW993275 breast_normal .a 3773 to 4347 579 to 1     Submitted on the opposite strand 579/579
(100 %)
18 diff
(96.9 %id)
TI_227713612   .a 3779 to 4632 922 to 78   AAA   845/982
(86 %)
11 diff
(98.9 %id)
TI_149296000   .a 3781 to 4640 939 to 85   AAA   855/1008
(84 %)
12 diff
(98.9 %id)
BQ646853 hepatocellular carcinoma, cell line, Liver .a 3788 to 4370 586 to 2     Submitted on the opposite strand 585/997
(58 %)
0 diff
(100 %id)
CD619737   .a 3798 to 4033 248 to 13       236/250
(94 %)
0 diff
(100 %id)
TI_227715306   .a 3805 to 4630 905 to 91   AAA   815/977
(83 %)
11 diff
(98.9 %id)
TI_149287453   .a 3806 to 4630 885 to 68   AAA   818/1067
(76 %)
21 diff
(98.1 %id)
TI_149298095   .a 3806 to 4640 910 to 88   AAA   823/938
(87 %)
17 diff
(98.2 %id)
TI_149301447   .a 3808 to 4640 883 to 57   AAA   827/950
(87 %)
9 diff
(99.1 %id)
TI_151724884   .a 3811 to 4642 914 to 87       828/1019
(81 %)
0 diff
(100 %id)
BU168427 ductal carcinoma, cell line, Pancreas .a 3821 to 4731 1 to 911       911/915
(99 %)
10 diff
(99.0 %id)
BQ691956 ductal carcinoma, cell line, Pancreas .a 3821 to 4698 1 to 883       883/883
(100 %)
19 diff
(97.9 %id)
BQ278753 adenocarcinoma, cell line, breast .a 3837 to 4632 1 to 800   AAA   800/800
(100 %)
7 diff
(99.2 %id)
BU857123 adenocarcinoma, cell line, breast .a 3837 to 4632 1 to 797       797/934
(85 %)
3 diff
(99.7 %id)
BU633457 cell lines, Chondrosarcoma .a 3840 to 4640 815 to 19   AAA   797/797
(100 %)
6 diff
(99.3 %id)
BM977623 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 3842 to 4640 809 to 19   AAA   791/791
(100 %)
6 diff
(99.3 %id)
TI_227715086   .a 3845 to 4631 868 to 87   AAA   782/985
(79 %)
7 diff
(99.3 %id)
BU844803 ovary, teratocarcinoma, cell line .a 3848 to 4723 1 to 877       877/878
(99 %)
3 diff
(99.7 %id)
BU857868 adenocarcinoma, cell line, breast .a 3851 to 4694 1 to 851       851/933
(91 %)
17 diff
(98.2 %id)
CD742632 Alveolar Macrophage, lung .a 3852 to 4632 795 to 19   AAA   777/777
(100 %)
4 diff
(99.5 %id)
BQ056183 lymph, lymphoma, cell line .a 3854 to 4694 1 to 853       853/1014
(84 %)
26 diff
(97.5 %id)
TI_154128451   .a 3859 to 4635 864 to 96   AAA   769/964
(79 %)
13 diff
(98.7 %id)
AI372646   .a 3864 to 4387 1 to 526       526/527
(99 %)
10 diff
(98.2 %id)
TI_149297581   .a 3881 to 4633 808 to 66   AAA   743/932
(79 %)
10 diff
(99.0 %id)
CX783189 human embryonic stem cells .a 3883 to 4698 1 to 816       816/816
(100 %)
1 diff
(99.9 %id)
TI_59391117   .a 3883 to 4589 107 to 814       708/708
(100 %)
1 diff
(99.9 %id)
BU542467 carcinoma, cell line, Prostate .a 3886 to 4739 1 to 854       854/912
(93 %)
4 diff
(99.6 %id)
BU543019 carcinoma, cell line, Prostate .a 3886 to 4786 1 to 909       909/911
(99 %)
17 diff
(98.2 %id)
BQ962134 epithelioid carcinoma cell line, Pancreas .a 3898 to 4810 1 to 930       930/937
(99 %)
14 diff
(98.6 %id)
DB503264 hypothalamus .a 3902 to 4393 1 to 492       492/492
(100 %)
0 diff
(100 %id)
BQ065270 lymph, lymphoma, cell line .a 3910 to 4744 1 to 836       836/1024
(81 %)
10 diff
(99.1 %id)
TI_154128559   .a 3914 to 4640 815 to 90   AAA   726/726
(100 %)
9 diff
(98.8 %id)
BQ645019 hepatocellular carcinoma, cell line, Liver .a 3923 to 4822 1 to 903       903/903
(100 %)
10 diff
(98.9 %id)
BQ652955 hepatocellular carcinoma, cell line, Liver .a 3923 to 4739 1 to 818       818/920
(88 %)
3 diff
(99.7 %id)
BU541199 carcinoma, cell line, Prostate .a 3927 to 4805 1 to 882       882/882
(100 %)
4 diff
(99.6 %id)
H45678 breast .a 3932 to 4293 1 to 367     Submitted on the opposite strand 367/537
(68 %)
7 diff
(98.7 %id)
BU845466 ovary, teratocarcinoma, cell line .a 3933 to 4852 1 to 920       920/924
(99 %)
8 diff
(99.2 %id)
TI_59391281   .a 3941 to 4738 99 to 911       813/817
(99 %)
24 diff
(97.1 %id)
BU557047 ovary, teratocarcinoma, cell line .a 3948 to 4831 1 to 890       890/939
(94 %)
12 diff
(98.8 %id)
BU856111 ovary, teratocarcinoma, cell line .a 3948 to 4832 1 to 887       887/889
(99 %)
11 diff
(98.8 %id)
BU930976 ovary, teratocarcinoma, cell line .a 3948 to 4853 1 to 915       915/932
(98 %)
13 diff
(98.7 %id)
BU931699 ovary, teratocarcinoma, cell line .a 3948 to 4825 1 to 879       879/879
(100 %)
3 diff
(99.7 %id)
BF880676 lung_tumor .a 3953 to 4101 150 to 5     Submitted on the opposite strand 146/150
(97 %)
0 diff
(100 %id)
BM665243 eye, human retina .a 3987 to 4630 662 to 19   AAA   644/644
(100 %)
0 diff
(100 %id)
BU741621 eye, fetal eye .a 3996 to 4640 663 to 19   AAA   645/645
(100 %)
0 diff
(100 %id)
BM725890 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 4043 to 4628 1 to 586       586/586
(100 %)
0 diff
(100 %id)
AW351496 breast .a 4046 to 4375 331 to 3       329/333
(98 %)
0 diff
(100 %id)
TI_57243531   .a 4046 to 4743 37 to 734       698/734
(95 %)
6 diff
(99.2 %id)
CX869056 embryonic stem .a 4057 to 4942 1 to 886       886/886
(100 %)
0 diff
(100 %id)
TI_57229915   .a 4057 to 4604 438 to 979       542/899
(60 %)
6 diff
(99.4 %id)
AI910325 breast .a 4064 to 4376 317 to 5       313/319
(98 %)
0 diff
(100 %id)
BQ062698 lymph, lymphoma, cell line .a 4072 to 5006 1 to 945       945/1032
(91 %)
20 diff
(98.1 %id)
BQ064983 lymph, lymphoma, cell line .a 4072 to 4966 1 to 912       912/1023
(89 %)
20 diff
(98.1 %id)
BQ691226 ductal carcinoma, cell line, Pancreas .a 4072 to 4866 1 to 798       798/875
(91 %)
5 diff
(99.5 %id)
BE745526 adenocarcinoma cell line, ovary .a 4075 to 4877 1 to 805       805/955
(84 %)
15 diff
(98.5 %id)
BJ996233 hepatoblastoma .a 4079 to 4601 524 to 1       524/524
(100 %)
2 diff
(99.7 %id)
CA455374 adenocarcinoma, cell line, breast .a 4087 to 4933 1 to 858       858/863
(99 %)
16 diff
(98.2 %id)
CA455434 adenocarcinoma, cell line, breast .a 4087 to 4967 1 to 902       902/909
(99 %)
7 diff
(99.3 %id)
AI910309 breast .a 4093 to 4381 306 to 18       289/309
(93 %)
0 diff
(100 %id)
CN392371 embryonic stem cells, cell lines H1, H7, andH9 .a 4093 to 4633 588 to 48   AAA Submitted on the opposite strand 541/541
(100 %)
3 diff
(99.5 %id)
AA506310 Prostate .a 4103 to 4484 382 to 1       382/382
(100 %)
0 diff
(100 %id)
BM667952 eye, lens .a 4108 to 4640 551 to 19   AAA   533/533
(100 %)
0 diff
(100 %id)
TI_59389411   .a 4119 to 4171 875 to 928       809/1108
(73 %)
29 diff
(97.4 %id)
BE075712 breast .a 4120 to 4323 229 to 27     Submitted on the opposite strand 203/229
(88 %)
0 diff
(100 %id)
BE747259 adenocarcinoma cell line, ovary .a 4154 to 4969 1 to 809       809/936
(86 %)
20 diff
(97.9 %id)
BE149779 head_neck .a 4163 to 4508 348 to 3     Submitted on the opposite strand 346/348
(99 %)
0 diff
(100 %id)
BQ923339 eye, normal pigmented retinal epithelium .a 4177 to 5007 1 to 834       834/881
(94 %)
5 diff
(99.5 %id)
CV360742 head_neck .a 4195 to 4334 142 to 1     Submitted on the opposite strand 142/142
(100 %)
7 diff
(95.1 %id)
H45719 breast .a 4237 to 4636 409 to 1     Submitted on the opposite strand 409/444
(92 %)
10 diff
(97.8 %id)
BF943771 nervous_normal .a 4250 to 4745 508 to 10     Submitted on the opposite strand 499/508
(98 %)
0 diff
(100 %id)
BF817635 colon_ins .a 4254 to 4618 365 to 1     Submitted on the opposite strand 365/365
(100 %)
1 diff
(99.8 %id)
BF845086 head_neck .a 4256 to 4594 345 to 4     Submitted on the opposite strand 342/345
(99 %)
0 diff
(100 %id)
BI087725 cervix .a 4256 to 5102 1 to 846       846/857
(98 %)
14 diff
(98.4 %id)
TI_154178629   .a 4258 to 5082 70 to 886       817/863
(94 %)
15 diff
(98.3 %id)
TI_154178647   .a 4258 to 5079 70 to 884       815/817
(99 %)
12 diff
(98.6 %id)
BU858079 adenocarcinoma, cell line, breast .a 4281 to 5145 1 to 877       877/907
(96 %)
19 diff
(98.0 %id)
BU838281 melanotic melanoma, cell line, skin .a 4290 to 5102 1 to 818       818/819
(99 %)
6 diff
(99.3 %id)
BU155302 melanotic melanoma, cell line, skin .a 4290 to 5097 1 to 811       811/870
(93 %)
8 diff
(99.1 %id)
CX785270 human embryonic stem cells .a 4292 to 5082 1 to 791       791/791
(100 %)
0 diff
(100 %id)
BE092977 breast .a 4301 to 4515 252 to 35     Submitted on the opposite strand 218/252
(86 %)
0 diff
(100 %id)
BQ277786 ovary, teratocarcinoma, cell line .a 4308 to 5282 1 to 982       982/1021
(96 %)
14 diff
(98.7 %id)
AW410491 muscle, rhabdomyosarcoma .a 4336 to 4952 1 to 617       617/617
(100 %)
2 diff
(99.7 %id)
BU152678 carcinoma, cell line, Prostate .a 4337 to 5209 1 to 876       876/890
(98 %)
12 diff
(98.7 %id)
T34332 blood, white blood cells .a 4339 to 4640 314 to 11   AAA Submitted on the opposite strand 304/306
(99 %)
2 diff
(99.4 %id)
AW934767 denis_drash .a 4354 to 4948 614 to 4     Submitted on the opposite strand 611/614
(99 %)
0 diff
(100 %id)
EC469204 Prostate .a 4362 to 4472 110 to 1       110/110
(100 %)
6 diff
(94.6 %id)
BU849944 ovary, teratocarcinoma, cell line .a 4367 to 5245 1 to 886       886/886
(100 %)
17 diff
(98.1 %id)
TI_154179489   .a 4379 to 5189 67 to 870       804/872
(92 %)
11 diff
(98.8 %id)
TI_154179615   .a 4379 to 5226 68 to 911       844/845
(99 %)
18 diff
(97.9 %id)
BQ645887 hepatocellular carcinoma, cell line, Liver .a 4382 to 5206 9 to 840       832/884
(94 %)
16 diff
(98.2 %id)
BQ654086 hepatocellular carcinoma, cell line, Liver .a 4382 to 5234 1 to 865       865/888
(97 %)
26 diff
(97.1 %id)
TI_59380150   .a 4382 to 5153 91 to 865   AAA   775/779
(99 %)
39 diff
(95.0 %id)
BQ892447 hepatocellular carcinoma, cell line, Liver .a 4385 to 5256 1 to 878       878/895
(98 %)
11 diff
(98.8 %id)
TI_44166131   .a 4389 to 5140 126 to 901       776/1001
(77 %)
6 diff
(99.5 %id)
BM470653 eye, retinoblastoma .a 4391 to 5214 1 to 842       842/1015
(82 %)
32 diff
(96.9 %id)
BU846408 ovary, teratocarcinoma, cell line .a 4416 to 5219 1 to 807       807/944
(85 %)
10 diff
(99.0 %id)
BU556865 ovary, teratocarcinoma, cell line .a 4416 to 5249 1 to 841       841/960
(87 %)
17 diff
(98.3 %id)
BU859153 ovary, teratocarcinoma, cell line .a 4416 to 5339 1 to 931       931/938
(99 %)
18 diff
(98.1 %id)
BE092291 breast .a 4423 to 4776 354 to 1     Submitted on the opposite strand 354/354
(100 %)
2 diff
(99.5 %id)
BU538378 adenocarcinoma, cell line, breast .a 4432 to 5322 1 to 902       902/969
(93 %)
23 diff
(97.7 %id)
BQ055999 lymph, lymphoma, cell line .a 4481 to 5332 1 to 857       857/1098
(78 %)
28 diff
(97.5 %id)
BQ919918 carcinoma, cell line, Prostate .a 4481 to 5321 1 to 841       841/955
(88 %)
14 diff
(98.6 %id)
BU542580 carcinoma, cell line, Prostate .a 4481 to 5327 1 to 854       854/921
(92 %)
18 diff
(98.1 %id)
BQ671191 epidermoid carcinoma, cell line, salivary gland .a 4489 to 5281 1 to 798       798/964
(82 %)
14 diff
(98.6 %id)
BQ962106 epithelioid carcinoma cell line, Pancreas .a 4489 to 5351 1 to 869       869/873
(99 %)
16 diff
(98.2 %id)
EC440534 Prostate .a 4506 to 4602 99 to 3       97/99
(97 %)
0 diff
(100 %id)
EC499148 Prostate .a 4506 to 4602 99 to 3       97/99
(97 %)
0 diff
(100 %id)
EC514382 Prostate .a 4506 to 4600 95 to 1       95/95
(100 %)
0 diff
(100 %id)
BM475073 duodenal adenocarcinoma, cell line, small intestine .a 4510 to 5371 1 to 876       876/934
(93 %)
1 diff
(99.9 %id)
CX869523 embryonic stem .a 4519 to 5153 1 to 635   fully sequenced,   635/635
(100 %)
0 diff
(100 %id)
TI_57229560   .a 4577 to 5141 92 to 656       565/830
(68 %)
1 diff
(99.9 %id)
BQ923468 eye, normal pigmented retinal epithelium .a 4597 to 5414 1 to 838       838/969
(86 %)
36 diff
(96.3 %id)
BQ339992 nervous_normal .a 4618 to 4819 202 to 1       202/202
(100 %)
0 diff
(100 %id)
TI_59390578   .a 4619 to 5062 242 to 685       444/685
(64 %)
11 diff
(98.4 %id)
BQ956991 brain, neuroblastoma, cell line .a 4620 to 5534 1 to 927       927/927
(100 %)
33 diff
(96.5 %id)
BM927531 lymph, lymphoma, cell line .a 4623 to 5562 1 to 952       952/1052
(90 %)
26 diff
(97.6 %id)
BQ065420 lymph, lymphoma, cell line .a 4623 to 5529 1 to 929       929/1033
(89 %)
30 diff
(97.1 %id)
TI_154180216   .a 4633 to 5479 76 to 918       843/843
(100 %)
11 diff
(98.7 %id)
EC537876 Prostate .a 4645 to 4724 80 to 1       80/89
(89 %)
0 diff
(100 %id)
EC566916 Prostate .a 4645 to 4724 79 to 1       79/89
(88 %)
2 diff
(97.8 %id)
EC567076 Prostate .a 4645 to 4722 81 to 5       77/91
(84 %)
0 diff
(100 %id)
CA455348 adenocarcinoma, cell line, breast .a 4653 to 5435 1 to 789       789/861
(91 %)
8 diff
(99.1 %id)
TI_59385878   .a 4653 to 5075 66 to 489       424/646
(65 %)
7 diff
(99.0 %id)
BE711565 head_neck .a 4658 to 5011 354 to 1       354/355
(99 %)
0 diff
(100 %id)
TI_59395573   .a 4658 to 5067 61 to 471   AAA   411/858
(47 %)
5 diff
(99.5 %id)
EC444701 Prostate .a 4660 to 4752 98 to 5       94/98
(95 %)
0 diff
(100 %id)
BU157298 ductal carcinoma, cell line, Pancreas .a 4660 to 5691 1 to 1035       1035/1035
(100 %)
46 diff
(95.6 %id)
BU185822 ductal carcinoma, cell line, Pancreas .a 4660 to 5475 1 to 822       822/831
(98 %)
14 diff
(98.4 %id)
BQ899280 ductal carcinoma, cell line, Pancreas .a 4660 to 5569 1 to 918       918/942
(97 %)
23 diff
(97.6 %id)
BU191505 ductal carcinoma, cell line, Pancreas .a 4660 to 5461 1 to 820       820/915
(89 %)
30 diff
(96.8 %id)
BU168895 ductal carcinoma, cell line, Pancreas .a 4660 to 5626 1 to 963       963/964
(99 %)
26 diff
(97.4 %id)
BU180214 ductal carcinoma, cell line, Pancreas .a 4660 to 5564 1 to 910       910/911
(99 %)
17 diff
(98.2 %id)
BQ877981 ductal carcinoma, cell line, Pancreas .a 4660 to 5435 1 to 779       779/917
(84 %)
11 diff
(98.9 %id)
BQ686559 ductal carcinoma, cell line, Pancreas .a 4660 to 5461 1 to 815       815/840
(97 %)
17 diff
(98.0 %id)
BQ691721 ductal carcinoma, cell line, Pancreas .a 4660 to 5517 1 to 868       868/892
(97 %)
16 diff
(98.3 %id)
BQ689120 ductal carcinoma, cell line, Pancreas .a 4660 to 5471 1 to 818       818/840
(97 %)
13 diff
(98.5 %id)
BQ686275 ductal carcinoma, cell line, Pancreas .a 4660 to 5435 1 to 783       783/891
(87 %)
10 diff
(98.9 %id)
BQ899059 ductal carcinoma, cell line, Pancreas .a 4660 to 5490 1 to 845       845/898
(94 %)
20 diff
(97.8 %id)
BQ686547 ductal carcinoma, cell line, Pancreas .a 4660 to 5539 1 to 882       882/886
(99 %)
8 diff
(99.1 %id)
BQ880800 ductal carcinoma, cell line, Pancreas .a 4660 to 5546 1 to 892       892/893
(99 %)
16 diff
(98.3 %id)
BQ691618 ductal carcinoma, cell line, Pancreas .a 4660 to 5439 1 to 789       789/887
(88 %)
23 diff
(97.5 %id)
BQ888630 ductal carcinoma, cell line, Pancreas .a 4660 to 5484 1 to 838       838/907
(92 %)
19 diff
(98.0 %id)
BQ691284 ductal carcinoma, cell line, Pancreas .a 4660 to 5555 1 to 899       899/940
(95 %)
35 diff
(96.3 %id)
BQ687744 ductal carcinoma, cell line, Pancreas .a 4660 to 5435 1 to 784       784/951
(82 %)
20 diff
(97.9 %id)
BQ689439 ductal carcinoma, cell line, Pancreas .a 4660 to 5544 1 to 890       890/911
(97 %)
16 diff
(98.3 %id)
BQ687680 ductal carcinoma, cell line, Pancreas .a 4660 to 5514 1 to 866       866/957
(90 %)
27 diff
(97.2 %id)
BQ688692 ductal carcinoma, cell line, Pancreas .a 4660 to 5443 1 to 789       789/876
(90 %)
23 diff
(97.4 %id)
EC449256 Prostate .a 4675 to 4771 96 to 1       96/96
(100 %)
1 diff
(99.0 %id)
BM696406 eye, lens .a 4688 to 5275 1 to 588       588/588
(100 %)
0 diff
(100 %id)
CX164212 human embryonic stem cells differentiated toan early endodermal cell type .a 4697 to 5492 1 to 796       796/796
(100 %)
0 diff
(100 %id)
TI_57228262   .a 4747 to 5429 52 to 730       679/679
(100 %)
19 diff
(97.3 %id)
BQ683333 melanotic melanoma, cell line, skin .a 4750 to 5538 1 to 795       795/884
(89 %)
11 diff
(98.8 %id)
BM910250 astrocytoma grade IV, cell line, brain .a 4759 to 5546 1 to 791       791/1052
(75 %)
8 diff
(99.3 %id)
BM696632 eye, lens .a 4761 to 5293 1 to 534       534/534
(100 %)
2 diff
(99.7 %id)
AF113690 Liver .a 4767 to 5846 1 to 1082   AAA   1082/1082
(100 %)
1 diff
(100.0 %id)
TI_154171977   .a 4768 to 5441 89 to 770       682/1015
(67 %)
39 diff
(96.2 %id)
BQ065232 lymph, lymphoma, cell line .a 4777 to 5683 1 to 912       912/972
(93 %)
23 diff
(97.7 %id)
BQ643405 lymph, lymphoma, cell line .a 4777 to 5613 1 to 838       838/912
(91 %)
9 diff
(99.1 %id)
BU538750 adenocarcinoma, cell line, breast .a 4794 to 5691 1 to 905       905/909
(99 %)
15 diff
(98.4 %id)
EC494572 Prostate .a 4798 to 4894 96 to 1       96/96
(100 %)
1 diff
(99.0 %id)
BU858191 adenocarcinoma, cell line, breast .a 4799 to 5662 1 to 871       871/876
(99 %)
20 diff
(97.8 %id)
BM705877 eye, lens .a 4810 to 5296 1 to 487       487/487
(100 %)
1 diff
(99.8 %id)
BU859689 adenocarcinoma, cell line, breast .a 4815 to 5716 1 to 908   tiling clone,   908/910
(99 %)
13 diff
(98.6 %id)
BF751534 breast_normal .a 4834 to 4954 125 to 7     Submitted on the opposite strand 119/125
(95 %)
0 diff
(100 %id)
BF751545 breast_normal .a 4834 to 4960 141 to 16     Submitted on the opposite strand 126/141
(89 %)
0 diff
(100 %id)
BQ064457 lymph, lymphoma, cell line .a 4846 to 5706 1 to 873       873/982
(88 %)
38 diff
(96.2 %id)
BQ652882 hepatocellular carcinoma, cell line, Liver .a 4846 to 5702 1 to 865       865/867
(99 %)
17 diff
(98.1 %id)
BQ652700 hepatocellular carcinoma, cell line, Liver .a 4846 to 5636 1 to 806       806/963
(83 %)
35 diff
(96.4 %id)
BF800927 colon_ins .a 4861 to 5106 246 to 2     Submitted on the opposite strand 245/246
(99 %)
0 diff
(100 %id)
BF873325 lung_tumor .a 4932 to 5102 171 to 1     Submitted on the opposite strand 171/232
(73 %)
5 diff
(97.9 %id)
TI_149297814   .a 4940 to 5846 974 to 86   AAA   889/972
(91 %)
26 diff
(97.4 %id)
EC447569 Prostate .a 4943 to 5046 106 to 4       103/107
(96 %)
0 diff
(100 %id)
EC486990 Prostate .a 4943 to 5046 100 to 1       100/101
(99 %)
3 diff
(97.1 %id)
BM696748 eye, lens .a 4963 to 5416 1 to 454   fully sequenced,   454/454
(100 %)
2 diff
(99.6 %id)
BU539243 adenocarcinoma, cell line, breast .a 4975 to 5840 1 to 866       866/867
(99 %)
4 diff
(99.6 %id)
TI_57192376   .a 5005 to 5821 56 to 888       833/842
(98 %)
68 diff
(92.0 %id)
TI_149295810   .a 5028 to 5846 898 to 93   AAA   806/929
(86 %)
28 diff
(97.0 %id)
BU848907 ovary, teratocarcinoma, cell line .a 5033 to 5847 1 to 815       815/915
(89 %)
1 diff
(99.9 %id)
EC537155 Prostate .a 5035 to 5170 132 to 1       132/132
(100 %)
7 diff
(94.7 %id)
BM700055 eye, lens .a 5056 to 5400 1 to 345   fully sequenced,   345/345
(100 %)
0 diff
(100 %id)
TI_149295915   .a 5063 to 5846 879 to 106   AAA   774/926
(83 %)
15 diff
(98.4 %id)
TI_154113350   .a 5073 to 5841 852 to 95   AAA   758/931
(81 %)
24 diff
(97.5 %id)
AW380519 head_neck .a 5090 to 5375 325 to 33       293/337
(86 %)
0 diff
(100 %id)
TI_149274558   .a 5105 to 5846 859 to 124   AAA   736/932
(78 %)
11 diff
(98.9 %id)
TI_149287769   .a 5105 to 5846 834 to 102   AAA   733/943
(77 %)
14 diff
(98.6 %id)
CX868983 embryonic stem .a 5109 to 5846 762 to 25   AAA   738/738
(100 %)
0 diff
(100 %id)
AI133330 Liver .a 5128 to 5841 716 to 1       716/756
(94 %)
2 diff
(99.8 %id)
CX869448 embryonic stem .a 5129 to 5846 744 to 27   fully sequenced, AAA   718/718
(100 %)
0 diff
(100 %id)
TI_154018674   .a 5134 to 5846 65 to 773   AAA Submitted on the opposite strand 709/773
(91 %)
6 diff
(99.3 %id)
TI_149306375   .a 5137 to 5846 804 to 93   AAA   712/939
(75 %)
5 diff
(99.5 %id)
CA437908 lung, Metastatic Chondrosarcoma .a 5137 to 5816 1 to 680     Submitted on the opposite strand 680/680
(100 %)
3 diff
(99.6 %id)
AF132203 Liver .a 5139 to 5841 703 to 1     Submitted on the opposite strand 703/703
(100 %)
0 diff
(100 %id)
GD137580   .a 5139 to 5257 119 to 1     Submitted on the opposite strand 119/119
(100 %)
4 diff
(96.7 %id)
GD138549   .a 5139 to 5257 119 to 1     Submitted on the opposite strand 119/119
(100 %)
1 diff
(99.2 %id)
BM996739 lung, Metastatic Chondrosarcoma .a 5139 to 5817 1 to 676     Submitted on the opposite strand 676/676
(100 %)
8 diff
(98.9 %id)
TI_149307338   .a 5139 to 5846 837 to 131   AAA   707/899
(78 %)
14 diff
(98.5 %id)
CA437715 lung, Metastatic Chondrosarcoma .a 5139 to 5823 1 to 681   AAA Submitted on the opposite strand 681/681
(100 %)
4 diff
(99.5 %id)
BQ001554 lung, Metastatic Chondrosarcoma .a 5140 to 5846 1 to 707     Submitted on the opposite strand 707/707
(100 %)
2 diff
(99.8 %id)
TI_159695259   .a 5142 to 5846 827 to 132   AAA   696/894
(77 %)
54 diff
(94.0 %id)
TI_154018946   .a 5156 to 5846 784 to 94   AAA   691/692
(99 %)
1 diff
(99.9 %id)
AI372645   .a 5160 to 5633 474 to 1       474/474
(100 %)
4 diff
(99.2 %id)
TI_227715186   .a 5178 to 5760 989 to 415       575/1101
(52 %)
0 diff
(100 %id)
TI_159680622   .a 5181 to 5846 786 to 123   AAA   664/989
(67 %)
29 diff
(97.1 %id)
BM669148 eye, lens .a 5194 to 5846 671 to 19   AAA   653/653
(100 %)
1 diff
(99.9 %id)
CV806585 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 5209 to 5846 663 to 26   AAA Submitted on the opposite strand 638/638
(100 %)
4 diff
(99.4 %id)
TI_154015729   .a 5229 to 5846 718 to 101   AAA   618/982
(62 %)
2 diff
(99.8 %id)
X85693   .a 5244 to 5437 190 to 1       190/190
(100 %)
6 diff
(96.9 %id)
TI_149308357   .a 5253 to 5848 699 to 104   tiling clone, AAA   596/901
(66 %)
14 diff
(98.5 %id)
TI_149301080   .a 5256 to 5846 660 to 69   AAA   592/690
(85 %)
1 diff
(99.9 %id)
TI_154184091   .a 5287 to 5847 106 to 663       558/591
(94 %)
8 diff
(98.7 %id)
BE090152 breast .a 5306 to 5771 487 to 22     Submitted on the opposite strand 466/487
(95 %)
0 diff
(100 %id)
DB366549   .a 5319 to 5846 528 to 1       528/528
(100 %)
0 diff
(100 %id)
BM667853 eye, lens .a 5328 to 5846 537 to 19   AAA   519/519
(100 %)
0 diff
(100 %id)
CB133927 Liver .a 5330 to 5846 536 to 20   AAA Submitted on the opposite strand 517/517
(100 %)
1 diff
(99.9 %id)
DB369685   .a 5345 to 5846 502 to 1       502/504
(99 %)
0 diff
(100 %id)
DB542857 hippocampus .a 5351 to 5844 1 to 494     Submitted on the opposite strand 494/496
(99 %)
3 diff
(99.4 %id)
CR612541 neuroblastoma .a 5359 to 5847 1 to 489       489/489
(100 %)
0 diff
(100 %id)
TI_151750178   .a 5360 to 5846 568 to 82   AAA   487/1047
(46 %)
0 diff
(100 %id)
BU737857 eye, lens .a 5370 to 5847 496 to 19   fully sequenced, AAA   478/478
(100 %)
1 diff
(99.8 %id)
BU735153 eye, lens .a 5379 to 5846 486 to 19   AAA   468/468
(100 %)
0 diff
(100 %id)
BU735270 eye, lens .a 5386 to 5846 479 to 19   fully sequenced, AAA   461/461
(100 %)
0 diff
(100 %id)
AW410492 muscle, rhabdomyosarcoma .a 5392 to 5831 440 to 1       440/440
(100 %)
0 diff
(100 %id)
DB574497 hypothalamus .a 5402 to 5844 1 to 443     Submitted on the opposite strand 443/445
(99 %)
3 diff
(99.4 %id)
TI_149282981   .a 5415 to 5846 548 to 117   AAA   432/770
(56 %)
1 diff
(99.9 %id)
BQ356475 head_neck .a 5443 to 5643 206 to 1       206/206
(100 %)
17 diff
(91.8 %id)
H73511 liver and spleen .a 5450 to 5846 458 to 55   AAA Submitted on the opposite strand 404/407
(99 %)
14 diff
(96.6 %id)
T33423 brain .a 5454 to 5846 395 to 1       395/395
(100 %)
3 diff
(99.3 %id)
TI_149273890   .a 5461 to 5846 472 to 87   AAA   386/853
(45 %)
0 diff
(100 %id)
BG459775   .a 5471 to 5828 358 to 1     Submitted on the opposite strand 358/452
(79 %)
0 diff
(100 %id)
T33424 brain .a 5477 to 5846 370 to 1       370/370
(100 %)
0 diff
(100 %id)
FN153679 breast carcinoma .a 5478 to 5543 1 to 64       64/65
(98 %)
3 diff
(95.4 %id)
TI_57186103   .a 5491 to 5847 48 to 404       357/559
(63 %)
3 diff
(99.5 %id)
EC560063 Prostate .a 5496 to 5593 103 to 6       98/103
(95 %)
0 diff
(100 %id)
AA876644 metastatic prostate bone lesion .a 5518 to 5826 310 to 2       309/314
(98 %)
0 diff
(100 %id)
BE768764 prostate_tumor .a 5535 to 5643 110 to 1       110/114
(96 %)
5 diff
(95.7 %id)
EC526680 Prostate .a 5559 to 5658 100 to 1       100/100
(100 %)
0 diff
(100 %id)
BE765275 nervous_tumor .a 5560 to 5803 245 to 1       245/245
(100 %)
2 diff
(99.2 %id)
EC463470 Prostate .a 5568 to 5658 87 to 2       86/91
(94 %)
0 diff
(100 %id)
FN110187 breast carcinoma .a 5594 to 5692 1 to 96       96/96
(100 %)
3 diff
(96.9 %id)
CK570295 rectum .a 5667 to 5799 133 to 1       133/160
(83 %)
1 diff
(99.4 %id)
CK570357 rectum .a 5667 to 5799 133 to 1       133/136
(97 %)
1 diff
(99.3 %id)
BU735042 eye, lens .a 5702 to 5846 163 to 19   AAA   145/145
(100 %)
0 diff
(100 %id)
EC529472 Prostate .a 5744 to 5845 104 to 3       102/104
(98 %)
0 diff
(100 %id)
AI952722 pooled germ cell tumors .b-u 1 to 431 435 to 5 exact tiling clone,   431/435
(99 %)
0 diff
(100 %id)
BF989515 placenta_normal .b-u 69 to 361 305 to 12 S12I T13N S14F P15T H16T ...     294/334
(88 %)
0 diff
(100 %id)
BE086203.
matches multiple genes
breast .b-u 90 to 353 271 to 8 G10D S17L S18H L19*   Submitted on the opposite strand, also hits gene SCDP1 264/271
(97 %)
0 diff
(100 %id)
BF089473 head_neck .b-u 137 to 404 269 to 1       269/283
(95 %)
2 diff
(99.3 %id)
BE695455 breast .b-u 142 to 237 7 to 100       94/100
(94 %)
6 diff
(94.0 %id)
BE695447 breast .b-u 143 to 516 375 to 2       374/375
(99 %)
0 diff
(100 %id)
BE695449 breast .b-u 143 to 515 373 to 1       373/373
(100 %)
2 diff
(99.5 %id)
BE695451 breast .b-u 143 to 518 390 to 18       373/390
(95 %)
0 diff
(100 %id)
BE695453 breast .b-u 143 to 513 390 to 20       371/390
(95 %)
0 diff
(100 %id)
BE695460 breast .b-u 143 to 516 391 to 18       374/391
(95 %)
0 diff
(100 %id)
BE695463 breast .b-u 143 to 518 374 to 2       373/374
(99 %)
0 diff
(100 %id)
BE695465 breast .b-u 143 to 513 387 to 20       368/387
(95 %)
0 diff
(100 %id)
BE695466 breast .b-u 143 to 518 387 to 16       372/387
(96 %)
0 diff
(100 %id)
BE695469 breast .b-u 143 to 518 387 to 14       374/387
(96 %)
0 diff
(100 %id)
BE695470 breast .b-u 143 to 516 391 to 18       374/391
(95 %)
0 diff
(100 %id)
BE695479 breast .b-u 143 to 513 390 to 21       370/390
(94 %)
0 diff
(100 %id)
BE695481 breast .b-u 143 to 513 383 to 15       369/383
(96 %)
0 diff
(100 %id)
BE695482 breast .b-u 143 to 516 389 to 16       374/389
(96 %)
0 diff
(100 %id)
BE695483 breast .b-u 143 to 513 373 to 5       369/373
(98 %)
0 diff
(100 %id)
BE695495 breast .b-u 143 to 516 380 to 7       374/380
(98 %)
0 diff
(100 %id)
BE695497 breast .b-u 143 to 524 386 to 5       382/386
(98 %)
7 diff
(98.2 %id)
BE695500 breast .b-u 143 to 516 377 to 5       373/377
(98 %)
0 diff
(100 %id)
BE695503 breast .b-u 143 to 513 375 to 7       369/375
(98 %)
0 diff
(100 %id)
BE695505 breast .b-u 143 to 513 373 to 3       371/373
(99 %)
0 diff
(100 %id)
BE695506 breast .b-u 143 to 520 377 to 2       376/377
(99 %)
0 diff
(100 %id)
BE695507 breast .b-u 143 to 515 370 to 1       370/370
(100 %)
4 diff
(99.0 %id)
BE695510 breast .b-u 143 to 520 379 to 3       377/379
(99 %)
0 diff
(100 %id)
BE695516 breast .b-u 143 to 516 377 to 7       371/377
(98 %)
0 diff
(100 %id)
BE695525 breast .b-u 143 to 516 377 to 4       374/377
(99 %)
0 diff
(100 %id)
BE695535 breast .b-u 143 to 513 374 to 5       370/374
(98 %)
0 diff
(100 %id)
BE695541 breast .b-u 143 to 520 378 to 1   tiling clone,   378/378
(100 %)
1 diff
(99.8 %id)
BE695545 breast .b-u 143 to 516 385 to 14       372/385
(96 %)
0 diff
(100 %id)
BE695547 breast .b-u 143 to 516 388 to 16       373/388
(96 %)
0 diff
(100 %id)
BE695550 breast .b-u 143 to 515 376 to 5       372/376
(98 %)
0 diff
(100 %id)
BE695555 breast .b-u 143 to 518 380 to 7       374/380
(98 %)
0 diff
(100 %id)
BE695558 breast .b-u 143 to 520 390 to 15       376/390
(96 %)
0 diff
(100 %id)
BE695560 breast .b-u 143 to 518 378 to 3   tiling clone,   376/378
(99 %)
0 diff
(100 %id)
BE695572 breast .b-u 143 to 516 386 to 16       371/386
(96 %)
0 diff
(100 %id)
BE695573 breast .b-u 143 to 513 380 to 11       370/380
(97 %)
0 diff
(100 %id)
BE695581 breast .b-u 143 to 513 385 to 17       369/385
(95 %)
0 diff
(100 %id)
BE695583 breast .b-u 143 to 517 376 to 3       374/376
(99 %)
0 diff
(100 %id)
BE695597 breast .b-u 143 to 526 387 to 5       383/387
(98 %)
0 diff
(100 %id)
BE695601 breast .b-u 143 to 516 385 to 12       374/385
(97 %)
0 diff
(100 %id)
BE695602 breast .b-u 143 to 515 372 to 1       372/372
(100 %)
4 diff
(99.0 %id)
BE695603 breast .b-u 143 to 514 386 to 15       372/386
(96 %)
0 diff
(100 %id)
BE695604 breast .b-u 143 to 515 372 to 1       372/372
(100 %)
4 diff
(99.0 %id)
BE695605 breast .b-u 143 to 518 414 to 39       376/414
(90 %)
0 diff
(100 %id)
BE695606 breast .b-u 143 to 513 372 to 2       371/372
(99 %)
0 diff
(100 %id)
BE695611 breast .b-u 143 to 527 409 to 26       384/409
(93 %)
0 diff
(100 %id)
BE695614 breast .b-u 143 to 509 373 to 7       367/373
(98 %)
0 diff
(100 %id)
BE695616 breast .b-u 143 to 516 385 to 13       373/385
(96 %)
0 diff
(100 %id)
BE695617 breast .b-u 143 to 518 388 to 15       374/388
(96 %)
0 diff
(100 %id)
BF332975 breast .b-u 143 to 518 388 to 15       374/388
(96 %)
0 diff
(100 %id)
DN920692   .b-u 167 to 430 264 to 1       264/264
(100 %)
1 diff
(99.7 %id)
BE764331 nervous_tumor .b-u 202 to 515 314 to 1       314/314
(100 %)
2 diff
(99.4 %id)
BF826703 head_normal .b-u 207 to 346 148 to 6     Submitted on the opposite strand 143/150
(95 %)
0 diff
(100 %id)
BF095987 uterus_tumor .b-u 258 to 381 20 to 145       126/150
(84 %)
6 diff
(96.0 %id)
BE695515 breast .b-u 406 to 519 113 to 2       112/113
(99 %)
0 diff
(100 %id)
BM702070.
matches multiple genes
eye, optic nerve P1.a-u 915 to 1484 1 to 570     also hits gene SCDP1 570/570
(100 %)
16 diff
(97.2 %id)
BE086203.
matches multiple genes
breast P1.a-u 1298 to 1561 271 to 8     Submitted on the opposite strand, also hits gene SCDP1 264/271
(97 %)
0 diff
(100 %id)
AB032261   Gene SCD, variant not shown         Suspected internal deletion, this clone was ignored    
BF154469 breast_normal Gene SCD, variant not shown         Suspected internal deletion, this clone was ignored    
AV726984 hypothalamus Gene SCD, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
S70284   Gene SCD, variant not shown         This clone was ignored    
TI_149297715   Gene SCD, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_154094761   Gene SCD, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI