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Gene SBDSTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
438 supporting clones for gene SBDS back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA018638.
matches multiple genes
  .a 1 to 556 2 to 558   tiling clone, capped This clone was ignored, also hits gene SBDSP1 557/557
(100 %)
10 diff
(98.3 %id)
DA735650   .a 61 to 833 2 to 772   tiling clone, to resequence, capped   771/799
(96 %)
6 diff
(99.3 %id)
BI553530 brain, hippocampus .a 895 to 1630 7 to 751   tiling clone,   745/871
(85 %)
17 diff
(98.1 %id)
DC338680 subthalamic nucleus .a 903 to 1477 1 to 576       576/576
(100 %)
2 diff
(99.7 %id)
DC312515 alzheimer cortex .a 919 to 1528 11 to 620       610/610
(100 %)
0 diff
(100 %id)
DC338455 subthalamic nucleus .a 938 to 1486 1 to 550       550/550
(100 %)
3 diff
(99.5 %id)
AU098595   .a 940 to 1239 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
AU102870   .a 940 to 989 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
BP220358 colon .a 940 to 1521 1 to 582       582/582
(100 %)
6 diff
(99.0 %id)
DC312158 alzheimer cortex .a 945 to 1491 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DC393523 colon, tumor tissue .a 945 to 1336 1 to 392       392/392
(100 %)
0 diff
(100 %id)
BU150052 dorsal root ganglia .a 955 to 1884 1 to 930       930/931
(99 %)
9 diff
(99.1 %id)
DB484859 hypothalamus .a 959 to 1191 1 to 235       235/255
(92 %)
11 diff
(95.7 %id)
DB499950 hypothalamus .a 959 to 1451 1 to 493       493/493
(100 %)
3 diff
(99.4 %id)
BG707879 brain, hypothalamus .a 970 to 1769 1 to 797       797/799
(99 %)
13 diff
(98.4 %id)
CD697134 normal nasopharynx .a 972 to 1508 9 to 545       537/545
(98 %)
9 diff
(98.4 %id)
BP259690 heart .a 973 to 1550 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP194686 brain .a 975 to 1555 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
TI_45216420   .a 977 to 1660 68 to 753       686/830
(82 %)
11 diff
(98.7 %id)
DB503927 hypothalamus .a 978 to 1299 1 to 324       324/325
(99 %)
7 diff
(97.9 %id)
BI602675 brain, hypothalamus .a 981 to 1660 1 to 682       682/759
(89 %)
7 diff
(99.1 %id)
AK289609 alzheimer cortex .a 982 to 2043 1 to 1062 exact     1062/1062
(100 %)
0 diff
(100 %id)
DC312767 alzheimer cortex .a 982 to 1543 1 to 562       562/562
(100 %)
0 diff
(100 %id)
BX483494   .a 983 to 1475 1 to 494       494/494
(100 %)
2 diff
(99.6 %id)
DA133492 alzheimer cortex .a 984 to 1511 16 to 543   capped   528/542
(97 %)
6 diff
(98.9 %id)
BI598501 brain, hypothalamus .a 984 to 1564 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
BI599287 brain, hypothalamus .a 984 to 1754 1 to 770       770/770
(100 %)
10 diff
(98.8 %id)
BI667369 brain, hypothalamus .a 984 to 1564 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
BI670199 brain, hypothalamus .a 984 to 1726 1 to 750       750/841
(89 %)
25 diff
(97.1 %id)
AK001779 ovarian cancer .a 987 to 2591 1 to 1604 exact available from FLJ,   1604/1604
(100 %)
1 diff
(100.0 %id)
AY169963   .a 987 to 2591 1 to 1605 exact tiling clone,   1605/1605
(100 %)
0 diff
(100 %id)
DA355685 subthalamic nucleus .a 987 to 1550 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
NM_016038.2   .a 987 to 2591 1 to 1605 exact RefSeq,   1605/1605
(100 %)
0 diff
(100 %id)
BM707178 eye, eye anterior segment .a 987 to 1461 1 to 475       475/475
(100 %)
12 diff
(97.5 %id)
BP196299 adrenal gland .a 988 to 1570 1 to 581       581/581
(100 %)
4 diff
(99.4 %id)
CR626007 Placenta Cot 25-normalized .a 988 to 2585 1 to 1598 exact     1598/1598
(100 %)
0 diff
(100 %id)
BX402422 Placenta Cot 25-normalized .a 988 to 1727 1 to 739   fully sequenced,   739/739
(100 %)
2 diff
(99.8 %id)
CB178385 Pancreas, Purified pancreatic islet .a 988 to 1470 1 to 483       483/483
(100 %)
5 diff
(99.0 %id)
AU133634 ovary, tumor tissue .a 988 to 1674 2 to 694   capped   693/731
(94 %)
10 diff
(98.7 %id)
BP230102 brain .a 989 to 1569 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
DB484363 hypothalamus .a 989 to 1426 1 to 438       438/438
(100 %)
1 diff
(99.8 %id)
DB495829 hypothalamus .a 989 to 1497 1 to 510       510/510
(100 %)
2 diff
(99.7 %id)
BP263726 small intestine .a 989 to 1568 1 to 580       580/580
(100 %)
4 diff
(99.4 %id)
TI_45212050   .a 989 to 1564 93 to 668       576/668
(86 %)
6 diff
(99.2 %id)
TI_45212137   .a 989 to 1754 91 to 855       765/855
(89 %)
11 diff
(98.8 %id)
TI_44343327   .a 989 to 1564 89 to 664       576/664
(86 %)
7 diff
(99.0 %id)
TI_44344901   .a 989 to 1726 89 to 833       745/924
(80 %)
26 diff
(97.2 %id)
BP320376 placenta .a 989 to 1575 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DA084968 cerebellum .a 990 to 1542 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA129144 alzheimer cortex .a 990 to 1542 2 to 555   capped   554/554
(100 %)
4 diff
(99.3 %id)
BP257218 heart .a 991 to 1550 1 to 560       560/560
(100 %)
12 diff
(97.9 %id)
DA355251 subthalamic nucleus .a 992 to 1536 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BP258694 heart .a 993 to 1479 1 to 487       487/571
(85 %)
15 diff
(97.4 %id)
BP259786 heart .a 994 to 1545 1 to 552       552/552
(100 %)
6 diff
(99.0 %id)
BG699726 brain, hippocampus .a 994 to 1719 1 to 740       703/801
(87 %)
25 diff
(96.9 %id)
DN989893 brain, whole brain .a 994 to 1521 1 to 528       528/528
(100 %)
5 diff
(99.1 %id)
BI548601 brain, hippocampus .a 997 to 1877 1 to 884       884/887
(99 %)
41 diff
(95.4 %id)
BI561661 testis .a 997 to 1901 1 to 904       904/932
(96 %)
40 diff
(95.8 %id)
BP431361   .a 998 to 1127 1 to 130       130/130
(100 %)
1 diff
(99.3 %id)
BI253823 cervical carcinoma cell line, cervix .a 999 to 1793 1 to 803       803/803
(100 %)
24 diff
(97.1 %id)
BU598070 mixed (pool of 40 RNAs) .a 1000 to 1624 1 to 629       629/791
(79 %)
10 diff
(98.8 %id)
AA315671 colon .a 1001 to 1545 1 to 544       544/544
(100 %)
1 diff
(99.9 %id)
AF151855   .a 1001 to 1953 1 to 953 S41R G42A V43W T89A E105G ...     953/953
(100 %)
10 diff
(99.0 %id)
CR596032 Placenta Cot 25-normalized .a 1001 to 2567 1 to 1567 exact     1567/1567
(100 %)
0 diff
(100 %id)
AL551857 placenta, Placenta Cot 25-normalized .a 1001 to 2038 1 to 1027 S41R G42A V43W E44K D46T ...     1027/1076
(95 %)
20 diff
(98.2 %id)
BX403390 Placenta Cot 25-normalized .a 1001 to 1793 1 to 793       793/853
(92 %)
32 diff
(96.3 %id)
BI837945 pooled pancreas and spleen .a 1001 to 1777 1 to 778       778/778
(100 %)
3 diff
(99.7 %id)
TI_57163389   .a 1001 to 1777 44 to 821       778/821
(94 %)
9 diff
(99.0 %id)
CR613995 fetal brain .a 1002 to 2589 1 to 1588 exact     1588/1588
(100 %)
0 diff
(100 %id)
BX420588 brain, fetal brain .a 1002 to 1851 1 to 837   fully sequenced,   837/837
(100 %)
1 diff
(99.9 %id)
BX488811   .a 1002 to 1411 1 to 410       410/410
(100 %)
1 diff
(99.8 %id)
BI260501 cervical carcinoma cell line, cervix .a 1002 to 1737 10 to 750       741/750
(98 %)
19 diff
(97.5 %id)
BI547940 brain, hippocampus .a 1002 to 1791 6 to 807       802/808
(99 %)
20 diff
(97.6 %id)
BI548596 brain, hippocampus .a 1002 to 1827 6 to 825       822/825
(99 %)
28 diff
(96.7 %id)
TI_44166933   .a 1002 to 1791 125 to 926       802/927
(86 %)
20 diff
(97.9 %id)
TI_44167098   .a 1002 to 1827 126 to 945       822/945
(86 %)
27 diff
(97.2 %id)
TI_44167104   .a 1002 to 1877 92 to 970       879/973
(90 %)
42 diff
(95.7 %id)
TI_44350626   .a 1002 to 1901 129 to 1027       899/1055
(85 %)
40 diff
(96.3 %id)
CB149636 Liver .a 1002 to 1517 1 to 516       516/516
(100 %)
4 diff
(99.3 %id)
BP289392 lung .a 1002 to 1582 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA359984 subthalamic nucleus .a 1003 to 1556 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA364199 subthalamic nucleus .a 1003 to 1574 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BP226618   .a 1003 to 1486 1 to 481       481/500
(96 %)
13 diff
(97.4 %id)
AW161209 brain, frontal lobe .a 1003 to 1554 1 to 552       552/552
(100 %)
0 diff
(100 %id)
BQ889505 dorsal root ganglia .a 1004 to 1918 1 to 925       925/927
(99 %)
32 diff
(96.6 %id)
CD242348 brain, Pituitary .a 1004 to 1557 1 to 560       560/1148
(48 %)
22 diff
(98.1 %id)
BM847804 myeloma .a 1004 to 1578 1 to 575       575/577
(99 %)
1 diff
(99.9 %id)
BP366539 thymus .a 1004 to 1555 1 to 552       552/552
(100 %)
3 diff
(99.5 %id)
BQ695365 adipose .a 1006 to 1568 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
BP208792 cerebellum .a 1006 to 1586 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AA194336 muscle, skeletal muscle .a 1006 to 1363 1 to 353       353/355
(99 %)
6 diff
(98.4 %id)
BP289151 lung .a 1006 to 1577 1 to 572       572/572
(100 %)
0 diff
(100 %id)
BP355898   .a 1008 to 1589 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CN363131 embryonic stem cells, DMSO-treated H9 cellline .a 1009 to 1556 1 to 548       548/548
(100 %)
6 diff
(99.0 %id)
BF340476 brain, glioblastoma with EGFR amplification .a 1009 to 1768 12 to 778       767/908
(84 %)
30 diff
(96.7 %id)
BM471482 melanotic melanoma, skin .a 1009 to 2016 1 to 1008 Y202L G203W Q204P R218P E219R ...     1008/1008
(100 %)
20 diff
(98.1 %id)
CR601234 Placenta Cot 25-normalized .a 1010 to 2574 1 to 1565 exact     1565/1565
(100 %)
0 diff
(100 %id)
AL544028 placenta, Placenta Cot 25-normalized .a 1010 to 1825 1 to 816   fully sequenced,   816/816
(100 %)
0 diff
(100 %id)
BX423076 adult brain, brain .a 1010 to 2022 1 to 1000 S41X G42A V43W E44K D46T ...     1000/1000
(100 %)
15 diff
(98.5 %id)
BE836808 prostate_normal .a 1012 to 1513 505 to 1       505/513
(98 %)
10 diff
(98.1 %id)
CR604577 T cells (Jurkat cell line) Cot10-normalized .a 1013 to 2563 1 to 1551 exact     1551/1551
(100 %)
0 diff
(100 %id)
CR612387 Neuroblastoma Cot 25-normalized .a 1013 to 2574 1 to 1562 exact     1562/1562
(100 %)
0 diff
(100 %id)
AL527668 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1013 to 1849 1 to 828   fully sequenced,   828/828
(100 %)
1 diff
(99.9 %id)
AL559496 T cells from T cell leukemia .a 1013 to 1825 1 to 812   fully sequenced,   812/812
(100 %)
2 diff
(99.8 %id)
CD245466 White Matter .a 1013 to 1623 14 to 625       612/943
(64 %)
22 diff
(97.7 %id)
CA842115 Pancreas, Purified pancreatic islet .a 1014 to 1497 1 to 484       484/484
(100 %)
5 diff
(99.0 %id)
CN417908 embryonic stem cells, cell lines H1, H7, andH9 .a 1015 to 1657 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
CN417910 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1015 to 1581 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
CR591576 placenta .a 1016 to 2587 1 to 1572 exact     1572/1572
(100 %)
0 diff
(100 %id)
BX458831 placenta .a 1016 to 1797 1 to 782   fully sequenced,   782/782
(100 %)
2 diff
(99.8 %id)
AA121057 Pancreas .a 1016 to 1409 1 to 393       393/393
(100 %)
10 diff
(97.5 %id)
BC065700 Peripheral Nervous System, sympathetictrunk .a 1017 to 2591 1 to 1575 exact available from MGC, AAA   1575/1575
(100 %)
0 diff
(100 %id)
BQ433357 melanotic melanoma, skin .a 1018 to 1865 1 to 852       852/895
(95 %)
17 diff
(98.2 %id)
BQ722858 sympathetic trunk .a 1018 to 1722 1 to 711       711/874
(81 %)
13 diff
(98.6 %id)
BQ942561 sciatic nerve .a 1019 to 1627 1 to 607       607/957
(63 %)
7 diff
(99.3 %id)
BF726443 eye, lens .a 1020 to 1580 1 to 561       561/561
(100 %)
0 diff
(100 %id)
BE790045 large cell carcinoma, lung .a 1020 to 1616 1 to 622       622/899
(69 %)
28 diff
(96.9 %id)
BF237832 leiomyosarcoma cell line, uterus .a 1020 to 1630 1 to 636       575/908
(63 %)
33 diff
(96.4 %id)
BG695885 skin .a 1020 to 1687 1 to 668       668/668
(100 %)
2 diff
(99.8 %id)
CR622442 placenta .a 1021 to 2555 1 to 1535 exact     1535/1535
(100 %)
0 diff
(100 %id)
AL540698 placenta .a 1021 to 1917 1 to 897       897/897
(100 %)
3 diff
(99.7 %id)
BX424580 placenta .a 1021 to 1626 1 to 608       608/833
(72 %)
54 diff
(93.6 %id)
BG031467 breast, mammary adenocarcinoma, cell line .a 1021 to 1791 1 to 763       763/902
(84 %)
14 diff
(98.5 %id)
BG253271 adenocarcinoma, cell line, Liver .a 1021 to 1703 1 to 698       695/946
(73 %)
40 diff
(95.8 %id)
BF343359 brain, glioblastoma with EGFR amplification .a 1022 to 1766 1 to 733       735/936
(78 %)
26 diff
(97.3 %id)
BQ883874 dorsal root ganglia .a 1022 to 1778 1 to 764       764/829
(92 %)
17 diff
(98.0 %id)
AL514478.
matches multiple genes
neuroblastoma, placenta .a 1023 to 1903 1 to 860   fully sequenced, also hits gene MFAP4 860/860
(100 %)
5 diff
(99.5 %id)
BE870111 adenocarcinoma, colon .a 1023 to 1796 1 to 766       766/816
(93 %)
20 diff
(97.6 %id)
BE881995 leiomyosarcoma, uterus .a 1024 to 1630 1 to 608       608/636
(95 %)
6 diff
(99.1 %id)
CR610261 Placenta Cot 25-normalized .a 1025 to 2557 1 to 1533 exact     1533/1533
(100 %)
0 diff
(100 %id)
AL544847 placenta, Placenta Cot 25-normalized .a 1025 to 1727 1 to 702   fully sequenced,   702/702
(100 %)
1 diff
(99.9 %id)
BQ635972 eye, retina .a 1025 to 1632 1 to 608       608/608
(100 %)
0 diff
(100 %id)
BP325321 Pancreas .a 1025 to 1607 1 to 584       584/584
(100 %)
11 diff
(98.2 %id)
BG773162 testis .a 1028 to 1769 1 to 742       742/743
(99 %)
6 diff
(99.2 %id)
DB459938 testis .a 1030 to 1480 1 to 450       450/450
(100 %)
2 diff
(99.6 %id)
BP291212 lung .a 1030 to 1583 1 to 554       554/554
(100 %)
0 diff
(100 %id)
BP320153 placenta .a 1030 to 1611 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BM742655 Ascites, stomach .a 1030 to 1652 1 to 624       624/624
(100 %)
1 diff
(99.9 %id)
BM742953 Ascites, stomach .a 1030 to 1398 1 to 369       369/369
(100 %)
0 diff
(100 %id)
DB011561 colon, tumor tissue .a 1031 to 1614 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
AA082278   .a 1032 to 1478 1 to 447       447/447
(100 %)
17 diff
(96.2 %id)
AL702529 human skeletal muscle .a 1033 to 1471 1 to 439       439/439
(100 %)
2 diff
(99.6 %id)
BP234618 coronary artery .a 1033 to 1614 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA360419 subthalamic nucleus .a 1034 to 1585 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA562519 heart .a 1034 to 1617 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BP318168 pericardium .a 1034 to 1628 1 to 587       587/587
(100 %)
11 diff
(98.2 %id)
BQ897132 dorsal root ganglia .a 1035 to 1783 27 to 775       749/990
(75 %)
22 diff
(97.8 %id)
CR601377 Placenta Cot 25-normalized .a 1036 to 2528 1 to 1493 exact     1493/1493
(100 %)
0 diff
(100 %id)
BX361161 Placenta Cot 25-normalized .a 1036 to 1942 1 to 897 I10Y R11X L12P T13N N14Q ... fully sequenced,   897/897
(100 %)
12 diff
(98.7 %id)
BI552281 brain, hippocampus .a 1037 to 1827 1 to 790       790/790
(100 %)
7 diff
(99.2 %id)
BF341370 brain, glioblastoma with EGFR amplification .a 1039 to 1744 1 to 694       691/943
(73 %)
34 diff
(96.4 %id)
BQ717177 sympathetic trunk .a 1042 to 1946 1 to 916 E134*     916/917
(99 %)
25 diff
(97.3 %id)
CD689171 normal nasopharynx .a 1043 to 1623 11 to 591       581/591
(98 %)
9 diff
(98.5 %id)
BX420498 brain, fetal brain .a 1044 to 1977 1 to 920 D46B T228L G230A G232V S233L ...     920/934
(98 %)
18 diff
(98.1 %id)
BG722197 testis .a 1045 to 1537 1 to 499       499/499
(100 %)
8 diff
(98.4 %id)
CX757675 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 1046 to 1791 1 to 746     Submitted on the opposite strand 746/746
(100 %)
0 diff
(100 %id)
CR622210 Placenta Cot 25-normalized .a 1047 to 2564 1 to 1518 exact     1518/1518
(100 %)
0 diff
(100 %id)
AL545617 placenta, Placenta Cot 25-normalized .a 1047 to 1727 1 to 680   fully sequenced,   680/680
(100 %)
1 diff
(99.9 %id)
BU071952 Pancreas, Purified pancreatic islet .a 1047 to 1689 1 to 643       643/643
(100 %)
0 diff
(100 %id)
AU102871   .a 1050 to 1099 1 to 50       50/50
(100 %)
0 diff
(100 %id)
BP261037 small intestine .a 1050 to 1630 1 to 581       581/583
(99 %)
3 diff
(99.5 %id)
BG709248 brain, hypothalamus .a 1051 to 1830 1 to 782       782/782
(100 %)
13 diff
(98.4 %id)
BI597013 brain, hypothalamus .a 1051 to 1930 1 to 882 R11H L155W E156K V157*     882/884
(99 %)
23 diff
(97.4 %id)
BM843675 lymph node, stomach .a 1054 to 1249 1 to 195       195/195
(100 %)
3 diff
(98.5 %id)
CR606624 adult brain .a 1055 to 2547 1 to 1493 exact     1493/1493
(100 %)
0 diff
(100 %id)
AL533110 adult brain, brain .a 1055 to 1531 1 to 471       471/633
(74 %)
8 diff
(98.8 %id)
DB485011 hypothalamus .a 1056 to 1510 1 to 457       457/457
(100 %)
3 diff
(99.4 %id)
TI_45213352   .a 1056 to 1930 129 to 1005 R11H L155W E156K V157*     877/1007
(87 %)
22 diff
(97.9 %id)
CN363132 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1059 to 1692 1 to 635       635/635
(100 %)
1 diff
(99.9 %id)
BM129600 Islets of Langerhans, Pancreas .a 1062 to 1643 1 to 582       582/583
(99 %)
2 diff
(99.7 %id)
BM450009 melanotic melanoma, skin .a 1064 to 1980 1 to 929 C216L F217L R218P I220K D221L ...     929/1077
(86 %)
22 diff
(98.0 %id)
DB489361 hypothalamus .a 1065 to 1534 1 to 469       469/470
(99 %)
9 diff
(98.1 %id)
BP257868 heart .a 1065 to 1646 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA607989   .a 1066 to 1686 2 to 623   capped   622/622
(100 %)
1 diff
(99.9 %id)
BM907950 large cell carcinoma, lung .a 1068 to 1637 1 to 574       574/986
(58 %)
16 diff
(98.4 %id)
CR994398 T-Lymphocytes .a 1068 to 1939 1 to 874 M165X L234F E235G V236S L237T ...     874/874
(100 %)
3 diff
(99.7 %id)
CD107738 brain, Pituitary .a 1069 to 1916 1 to 850       850/850
(100 %)
3 diff
(99.7 %id)
BQ694127 adipose .a 1071 to 1655 1 to 585       585/585
(100 %)
0 diff
(100 %id)
CR597378 fetal brain .a 1073 to 2575 1 to 1503 exact     1503/1503
(100 %)
0 diff
(100 %id)
AL535993 brain, fetal brain .a 1073 to 1825 1 to 753   fully sequenced,   753/753
(100 %)
2 diff
(99.8 %id)
CX166542 human embryonic stem cells differentiated toan early endodermal cell type .a 1075 to 1923 1 to 849 V95A I212T N238H     849/849
(100 %)
6 diff
(99.3 %id)
BI114172 muscle, rhabdomyosarcoma .a 1077 to 1700 1 to 619   AAA   619/878
(70 %)
30 diff
(96.6 %id)
TI_45209053   .a 1077 to 1797 73 to 793       721/826
(87 %)
8 diff
(99.1 %id)
DB467797 hippocampus .a 1078 to 1492 1 to 415       415/415
(100 %)
1 diff
(99.8 %id)
BQ439758 melanotic melanoma, skin .a 1078 to 1899 1 to 827       827/828
(99 %)
8 diff
(99.1 %id)
BM716179 eye, RPE and Choroid .a 1080 to 1672 1 to 592   fully sequenced, Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 592/592
(100 %)
9 diff
(98.5 %id)
TI_151769528   .a 1080 to 1625 108 to 659       552/888
(62 %)
21 diff
(97.7 %id)
CD691682 normal nasopharynx .a 1081 to 1615 29 to 565       537/565
(95 %)
9 diff
(98.5 %id)
BG716354 brain, hypothalamus .a 1081 to 1763 1 to 683       683/683
(100 %)
17 diff
(97.6 %id)
BG718199 testis .a 1081 to 1850 1 to 770       770/770
(100 %)
5 diff
(99.4 %id)
BI596625 brain, hypothalamus .a 1081 to 1797 1 to 717       717/750
(95 %)
7 diff
(99.1 %id)
BM127065 Islets of Langerhans, Pancreas .a 1085 to 1642 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
BM126490 Islets of Langerhans, Pancreas .a 1085 to 1622 1 to 538       538/539
(99 %)
6 diff
(98.9 %id)
DB484613 hypothalamus .a 1086 to 1533 1 to 449       449/449
(100 %)
5 diff
(98.9 %id)
BE870054 adenocarcinoma, colon .a 1087 to 1723 1 to 642       642/642
(100 %)
7 diff
(99.0 %id)
BF773360 epid_tumor .a 1089 to 1382 298 to 4     Submitted on the opposite strand 295/302
(97 %)
1 diff
(99.7 %id)
BE275072 melanotic melanoma, skin .a 1097 to 1879 1 to 771       771/846
(91 %)
22 diff
(97.4 %id)
BM918258 blood, natural killer cells, cell line .a 1119 to 1792 1 to 675       675/1101
(61 %)
8 diff
(99.3 %id)
AA384283 thyroid gland .a 1120 to 1414 1 to 295       295/295
(100 %)
3 diff
(99.0 %id)
AI906378 breast .a 1124 to 1520 416 to 20       397/423
(93 %)
2 diff
(99.6 %id)
BP260470 small intestine .a 1139 to 1705 1 to 567       567/567
(100 %)
3 diff
(99.5 %id)
BE897175 melanotic melanoma, skin .a 1144 to 1896 1 to 750       750/779
(96 %)
14 diff
(98.3 %id)
U56653 whole peripheral blood .a 1150 to 1557 13 to 420       408/420
(97 %)
11 diff
(97.4 %id)
TI_1948230270   .a 1161 to 1321 124 to 284       161/179
(89 %)
6 diff
(96.7 %id)
TI_1948230441   .a 1161 to 1928 118 to 885 exact fully sequenced,   768/885
(86 %)
11 diff
(98.8 %id)
TI_1948230609   .a 1161 to 1397 113 to 349       237/254
(93 %)
6 diff
(97.7 %id)
TI_1948230773   .a 1161 to 1397 130 to 366       237/255
(92 %)
6 diff
(97.7 %id)
BI438237 Pancreas, Purified pancreatic islet .a 1163 to 1767 1 to 605       605/605
(100 %)
0 diff
(100 %id)
EL737010 mixed .a 1171 to 1872 1 to 701       701/704
(99 %)
8 diff
(98.9 %id)
TI_151807295   .a 1175 to 1935 88 to 847       760/761
(99 %)
27 diff
(96.5 %id)
BX453823 adult brain, brain .a 1185 to 2109 926 to 3       924/928
(99 %)
12 diff
(98.8 %id)
BU189387 melanotic melanoma, skin .a 1192 to 1940 1 to 755       755/901
(83 %)
15 diff
(98.4 %id)
BF792729 adrenal cortex carcinoma, cell line, adrenal gland .a 1219 to 2005 1 to 782       782/925
(84 %)
25 diff
(97.3 %id)
BP250321 hippocampus .a 1221 to 1808 1 to 588       588/588
(100 %)
1 diff
(99.9 %id)
CD703698 normal nasopharynx .a 1240 to 1629 20 to 410       391/410
(95 %)
6 diff
(98.6 %id)
BF341423 brain, glioblastoma with EGFR amplification .a 1246 to 2010 1 to 749       751/904
(83 %)
52 diff
(94.3 %id)
BF341271 brain, glioblastoma with EGFR amplification .a 1246 to 2042 1 to 793       795/899
(88 %)
47 diff
(94.8 %id)
BE622029 melanotic melanoma, skin .a 1274 to 2031 1 to 748       748/800
(93 %)
31 diff
(96.2 %id)
AJ710131 heart .a 1304 to 1841 551 to 15     Submitted on the opposite strand 537/551
(97 %)
0 diff
(100 %id)
BU942046 mixed (pool of 40 RNAs) .a 1304 to 1902 1 to 606       606/716
(84 %)
15 diff
(98.0 %id)
BF577269 muscle (skeletal) .a 1339 to 2008 1 to 658       660/903
(73 %)
32 diff
(96.5 %id)
BF130200 hypernephroma, Kidney .a 1344 to 1866 1 to 523       523/528
(99 %)
14 diff
(97.4 %id)
CV355711 head_neck .a 1345 to 1719 423 to 49     Submitted on the opposite strand 375/425
(88 %)
7 diff
(98.4 %id)
BG681506 skin, squamous cell carcinoma .a 1357 to 2008 1 to 651       651/652
(99 %)
3 diff
(99.6 %id)
CX166269 human embryonic stem cells differentiated toan early endodermal cell type .a 1381 to 2259 1 to 879       879/879
(100 %)
0 diff
(100 %id)
CB135502 Liver .a 1381 to 1895 1 to 515       515/515
(100 %)
1 diff
(99.9 %id)
BU732168 eye, RPE and Choroid .a 1398 to 1667 271 to 2   fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 270/271
(99 %)
0 diff
(100 %id)
BY795834 eye .a 1399 to 2034 1 to 636       636/636
(100 %)
0 diff
(100 %id)
EC529179 Prostate .a 1400 to 1500 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
BM967004 Islets of Langerhans, Pancreas .a 1409 to 1968 1 to 560       560/560
(100 %)
0 diff
(100 %id)
BM967238 Islets of Langerhans, Pancreas .a 1409 to 1954 1 to 546       546/546
(100 %)
0 diff
(100 %id)
CK823477 Islets of Langerhans, Pancreas .a 1409 to 1920 1 to 512       512/512
(100 %)
7 diff
(98.7 %id)
TI_1948230271   .a 1431 to 1922 619 to 128       492/519
(94 %)
0 diff
(100 %id)
BF084682 colon .a 1438 to 1629 1 to 195       195/223
(87 %)
13 diff
(94.2 %id)
CR593490 Placenta Cot 25-normalized .a 1444 to 2559 1 to 1116       1116/1116
(100 %)
0 diff
(100 %id)
CR606525 Placenta Cot 25-normalized .a 1444 to 2563 1 to 1120       1120/1120
(100 %)
0 diff
(100 %id)
AL549824 placenta, Placenta Cot 25-normalized .a 1444 to 1802 1 to 359   fully sequenced, AAA   359/359
(100 %)
4 diff
(98.9 %id)
AL549873 placenta, Placenta Cot 25-normalized .a 1444 to 2264 1 to 806   fully sequenced,   806/806
(100 %)
1 diff
(99.9 %id)
BU959165 mixed (pool of 40 RNAs) .a 1447 to 2122 1 to 695       695/883
(78 %)
22 diff
(97.6 %id)
CR599805 Placenta Cot 25-normalized .a 1448 to 2569 1 to 1122       1122/1122
(100 %)
0 diff
(100 %id)
AL550005 placenta, Placenta Cot 25-normalized .a 1448 to 1727 1 to 280   fully sequenced,   280/280
(100 %)
0 diff
(100 %id)
TI_1948230774   .a 1450 to 1922 600 to 128       473/500
(94 %)
0 diff
(100 %id)
BG678786 skin, squamous cell carcinoma .a 1458 to 2158 1 to 706       706/715
(98 %)
20 diff
(97.3 %id)
BM796333 stomach .a 1458 to 2017 1 to 560       560/560
(100 %)
4 diff
(99.3 %id)
BM846075 myeloma .a 1466 to 2011 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
BG170552 hypernephroma, cell line, Kidney .a 1473 to 2291 1 to 797       797/921
(86 %)
44 diff
(95.3 %id)
TI_1948230610   .a 1474 to 1922 575 to 127       449/476
(94 %)
0 diff
(100 %id)
BG105652 adrenal cortex carcinoma, cell line, adrenal gland .a 1479 to 2254 1 to 768       768/961
(79 %)
36 diff
(96.3 %id)
BF526130 brain, glioblastoma with EGFR amplification .a 1481 to 2257 1 to 765       765/799
(95 %)
20 diff
(97.5 %id)
BE158924 head_neck .a 1513 to 1863 554 to 204     Submitted on the opposite strand 351/554
(63 %)
0 diff
(100 %id)
BF338619 brain, glioblastoma with EGFR amplification .a 1519 to 2280 1 to 752       752/900
(83 %)
17 diff
(98.2 %id)
BG289165 bladder, transitional cell papilloma, cell line .a 1519 to 2251 1 to 737       737/802
(91 %)
6 diff
(99.3 %id)
BP375877 uterus .a 1523 to 2072 1 to 550       550/550
(100 %)
3 diff
(99.5 %id)
BG696421 skin .a 1527 to 2323 1 to 796       796/802
(99 %)
9 diff
(98.9 %id)
BF343814 brain, glioblastoma with EGFR amplification .a 1534 to 2352 1 to 817       817/944
(86 %)
20 diff
(97.9 %id)
DB525383 testis .a 1539 to 1972 1 to 435     Submitted on the opposite strand 435/435
(100 %)
3 diff
(99.4 %id)
DW417501 Liver .a 1551 to 1840 17 to 306       290/306
(94 %)
6 diff
(98.1 %id)
BF372334 prostate_tumor .a 1553 to 1956 405 to 1       405/405
(100 %)
21 diff
(94.9 %id)
AA487685 lung .a 1555 to 1953 1 to 398       398/398
(100 %)
1 diff
(99.8 %id)
BF082020 amnion_normal .a 1577 to 2040 16 to 479       464/479
(96 %)
8 diff
(98.4 %id)
BE925524 amnion_normal .a 1578 to 2046 1 to 471       471/480
(98 %)
10 diff
(98.0 %id)
BQ645597 hepatocellular carcinoma, cell line, Liver .a 1584 to 2466 8 to 892       885/893
(99 %)
21 diff
(97.7 %id)
BF337380 brain, glioblastoma with EGFR amplification .a 1590 to 2346 1 to 752       752/901
(83 %)
12 diff
(98.7 %id)
BI816794 brain, glioblastoma with EGFR amplification .a 1590 to 2251 1 to 665       665/665
(100 %)
5 diff
(99.3 %id)
EL949683 eyeball .a 1595 to 2095 39 to 539       501/539
(92 %)
7 diff
(98.8 %id)
BF126146 Liver .a 1604 to 2321 1 to 715       715/742
(96 %)
28 diff
(96.3 %id)
BF526569 brain, glioblastoma with EGFR amplification .a 1604 to 2421 1 to 818       818/1179
(69 %)
29 diff
(97.6 %id)
BF326460 amnion_normal .a 1628 to 2036 65 to 471       409/471
(86 %)
6 diff
(98.8 %id)
AL568550 placenta .a 1633 to 2518 923 to 38       886/926
(95 %)
2 diff
(99.8 %id)
BF844583 head_neck .a 1640 to 1926 1 to 287       287/287
(100 %)
0 diff
(100 %id)
BP374477 umbilical cord .a 1645 to 2217 1 to 580       580/580
(100 %)
17 diff
(97.1 %id)
BF927203 nervous_tumor .a 1649 to 1986 1 to 340       340/340
(100 %)
12 diff
(96.5 %id)
BF928177 nervous_tumor .a 1655 to 1986 1 to 335       335/335
(100 %)
10 diff
(97.1 %id)
BI223727 cervical carcinoma cell line, cervix .a 1657 to 2245 1 to 589       589/589
(100 %)
0 diff
(100 %id)
TI_182940345   .a 1674 to 2591 995 to 84   AAA   912/1014
(89 %)
15 diff
(98.6 %id)
CF126968 Chondrosarcoma Lung Metastasis cell lines, lung .a 1675 to 2403 1 to 728       728/728
(100 %)
3 diff
(99.6 %id)
TI_154190051   .a 1675 to 2554 51 to 926       876/1036
(84 %)
24 diff
(97.7 %id)
AL544808 placenta, Placenta Cot 25-normalized .a 1697 to 2557 860 to 1   fully sequenced,   860/860
(100 %)
23 diff
(97.4 %id)
AL571256 placenta, Placenta Cot 25-normalized .a 1697 to 2564 869 to 1   fully sequenced,   869/869
(100 %)
3 diff
(99.7 %id)
BX402421 Placenta Cot 25-normalized .a 1697 to 2585 892 to 1   fully sequenced,   892/892
(100 %)
5 diff
(99.5 %id)
AL573985 placenta, Placenta Cot 25-normalized .a 1697 to 2569 873 to 1   fully sequenced,   873/873
(100 %)
5 diff
(99.5 %id)
TI_1948230442   .a 1697 to 1922 353 to 128   fully sequenced,   226/253
(89 %)
0 diff
(100 %id)
BG619414 placenta .a 1708 to 2529 1 to 825       825/833
(99 %)
27 diff
(96.8 %id)
TI_154051387   .a 1710 to 2590 961 to 83   AAA   879/978
(89 %)
62 diff
(93.7 %id)
BF337825 brain, glioblastoma with EGFR amplification .a 1726 to 2450 1 to 724       724/725
(99 %)
7 diff
(99.1 %id)
BF337827 brain, glioblastoma with EGFR amplification .a 1743 to 2441 1 to 698       698/698
(100 %)
10 diff
(98.6 %id)
AW801379 uterus .a 1744 to 1995 1 to 252       252/258
(97 %)
2 diff
(99.3 %id)
AW801380 uterus .a 1744 to 1995 1 to 251       251/259
(96 %)
3 diff
(98.9 %id)
AW801526 uterus .a 1744 to 1995 1 to 252       252/258
(97 %)
2 diff
(99.3 %id)
BU161891 eye, retinoblastoma .a 1746 to 2606 1 to 871   AAA   871/885
(98 %)
25 diff
(97.2 %id)
BQ323049 colon_est .a 1755 to 2170 1 to 416       416/416
(100 %)
8 diff
(98.1 %id)
BX434197 placenta .a 1764 to 2587 824 to 1   fully sequenced,   824/824
(100 %)
2 diff
(99.8 %id)
AL566150 brain, fetal brain .a 1764 to 2575 812 to 1   fully sequenced,   812/812
(100 %)
6 diff
(99.3 %id)
AL570273 placenta, Placenta Cot 25-normalized .a 1764 to 2564 811 to 11   fully sequenced,   801/811
(98 %)
0 diff
(100 %id)
AL573869 placenta, Placenta Cot 25-normalized .a 1764 to 2535 797 to 25   fully sequenced,   773/797
(96 %)
0 diff
(100 %id)
AL581103 T cells from T cell leukemia .a 1764 to 2563 800 to 1   fully sequenced,   800/800
(100 %)
4 diff
(99.5 %id)
BE811465 amnion_normal .a 1769 to 2005 1 to 232       232/232
(100 %)
6 diff
(97.5 %id)
BF339603 brain, glioblastoma with EGFR amplification .a 1770 to 2496 1 to 719       719/911
(78 %)
22 diff
(97.6 %id)
TI_149313132   .a 1795 to 2596 892 to 90   AAA   803/988
(81 %)
12 diff
(98.8 %id)
TI_158431212   .a 1795 to 2516 825 to 98   AAA   728/783
(92 %)
12 diff
(98.5 %id)
CA311264 Human Lung Epithelial cells, lung .a 1795 to 2596 817 to 19   AAA   799/807
(99 %)
7 diff
(99.2 %id)
AL565013 adult brain, brain .a 1799 to 2547 751 to 1       751/751
(100 %)
18 diff
(97.7 %id)
TI_149295015   .a 1799 to 2591 857 to 74   AAA   784/933
(84 %)
13 diff
(98.7 %id)
AW393932 testis .a 1801 to 2417 35 to 649       615/649
(94 %)
6 diff
(99.1 %id)
BF831229 head_neck .a 1816 to 2176 364 to 3     Submitted on the opposite strand 362/364
(99 %)
0 diff
(100 %id)
AL527667 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 1819 to 2574 755 to 1   fully sequenced,   755/755
(100 %)
1 diff
(99.9 %id)
BX455591 brain, fetal brain .a 1821 to 2583 777 to 11   fully sequenced,   767/777
(98 %)
9 diff
(98.9 %id)
AW374115 breast .a 1823 to 1969 1 to 148       148/149
(99 %)
9 diff
(94.0 %id)
BM833373 stomach .a 1830 to 2117 1 to 288       288/288
(100 %)
0 diff
(100 %id)
TI_149279734   .a 1836 to 2591 816 to 62   AAA   755/1128
(66 %)
21 diff
(98.2 %id)
TI_154110888   .a 1843 to 2591 828 to 86   AAA   743/815
(91 %)
52 diff
(93.7 %id)
TI_149309838   .a 1848 to 2591 828 to 86   AAA   743/968
(76 %)
2 diff
(99.8 %id)
BE622669 melanotic melanoma, skin .a 1850 to 2539 697 to 1       697/933
(74 %)
19 diff
(98.0 %id)
TI_149294999   .a 1852 to 2591 817 to 79   AAA   739/939
(78 %)
6 diff
(99.4 %id)
BG325596 Kidney, renal cell adenocarcinoma .a 1864 to 2219 1 to 354       354/354
(100 %)
2 diff
(99.5 %id)
AL514477.
matches multiple genes
neuroblastoma, placenta .a 1873 to 2599 727 to 1   fully sequenced, also hits gene MFAP4 727/727
(100 %)
29 diff
(96.1 %id)
BF342896 brain, glioblastoma with EGFR amplification .a 1876 to 2592 36 to 758       723/840
(86 %)
6 diff
(99.3 %id)
TI_149291235   .a 1881 to 2591 767 to 63   AAA   705/705
(100 %)
6 diff
(99.2 %id)
BF338983 brain, glioblastoma with EGFR amplification .a 1882 to 2490 1 to 608       608/728
(83 %)
5 diff
(99.4 %id)
BF340782 brain, glioblastoma with EGFR amplification .a 1883 to 2591 1 to 718   AAA   718/718
(100 %)
21 diff
(97.1 %id)
BM789980 stomach .a 1885 to 2578 1 to 697       697/697
(100 %)
4 diff
(99.5 %id)
BU688201 lung .a 1886 to 2591 724 to 19   AAA   706/706
(100 %)
0 diff
(100 %id)
BU683510 lung .a 1887 to 2591 723 to 19   AAA   705/705
(100 %)
0 diff
(100 %id)
BU683524 lung .a 1887 to 2591 722 to 19   AAA   704/704
(100 %)
3 diff
(99.6 %id)
CN480884 Aveolar Macrophage, lung .a 1887 to 2591 723 to 19   AAA   705/705
(100 %)
0 diff
(100 %id)
BI494442 cochlea, ear .a 1888 to 2516 652 to 25   AAA   628/628
(100 %)
2 diff
(99.7 %id)
BE185967 head_neck .a 1893 to 2287 409 to 15     Submitted on the opposite strand 395/409
(96 %)
0 diff
(100 %id)
BE560709 Burkitt lymphoma, lymph .a 1903 to 2199 30 to 324       295/324
(91 %)
6 diff
(98.2 %id)
TI_149281858   .a 1908 to 2596 775 to 87   AAA   689/691
(99 %)
4 diff
(99.5 %id)
BX352130 Placenta Cot 25-normalized .a 1912 to 2528 622 to 1   fully sequenced,   622/622
(100 %)
14 diff
(97.8 %id)
BI226641 Burkitt lymphoma, lymph .a 1912 to 2219 1 to 306       306/306
(100 %)
4 diff
(98.7 %id)
AW393929 testis .a 1913 to 2556 647 to 4       644/649
(99 %)
0 diff
(100 %id)
BM790652 stomach .a 1925 to 2589 1 to 666       666/666
(100 %)
1 diff
(99.9 %id)
CB854490 lung .a 1927 to 2596 688 to 19   AAA   670/670
(100 %)
3 diff
(99.6 %id)
BF356811 head_neck .a 1931 to 2188 16 to 275       260/280
(92 %)
10 diff
(96.5 %id)
FN067423 breast carcinoma .a 1947 to 2005 59 to 1     Submitted on the opposite strand 59/60
(98 %)
1 diff
(98.4 %id)
AA194396 muscle, skeletal muscle .a 1967 to 2462 517 to 1       517/517
(100 %)
31 diff
(94.1 %id)
CF528509 placenta .a 1972 to 2516 562 to 18   AAA   545/545
(100 %)
0 diff
(100 %id)
AA044797.
matches multiple genes
uterus .a 1981 to 2508 1 to 528     also hits gene SBDSP1 528/528
(100 %)
18 diff
(96.6 %id)
BU075955 Pancreas, Purified pancreatic islet .a 1986 to 2592 607 to 1       607/607
(100 %)
0 diff
(100 %id)
BU682067 lung .a 1986 to 2591 624 to 19   AAA   606/606
(100 %)
0 diff
(100 %id)
TI_57237365   .a 1989 to 2595 35 to 641       607/694
(87 %)
9 diff
(98.8 %id)
BI909005 leukocyte .a 1990 to 2595 1 to 606       606/659
(91 %)
9 diff
(98.7 %id)
CA841822 Pancreas, Purified pancreatic islet .a 1998 to 2594 598 to 2       597/598
(99 %)
0 diff
(100 %id)
CF541095 lung .a 2001 to 2596 614 to 19   AAA   596/596
(100 %)
0 diff
(100 %id)
EH347175.
matches multiple genes
  .a 2024 to 2106 1 to 83     also hits gene SBDSP1 83/83
(100 %)
0 diff
(100 %id)
BG182983   .a 2028 to 2591 580 to 18   AAA Submitted on the opposite strand 563/755
(74 %)
37 diff
(95.1 %id)
BM126760 Islets of Langerhans, Pancreas .a 2036 to 2591 568 to 13   AAA   556/556
(100 %)
0 diff
(100 %id)
CK823476 Islets of Langerhans, Pancreas .a 2036 to 2599 570 to 7       564/570
(98 %)
0 diff
(100 %id)
BM505370 Pancreas, Purified pancreatic islet .a 2040 to 2591 552 to 1       552/552
(100 %)
0 diff
(100 %id)
BM129535 Islets of Langerhans, Pancreas .a 2041 to 2516 490 to 15   AAA   476/476
(100 %)
1 diff
(99.8 %id)
BQ228539 melanotic melanoma, skin .a 2041 to 2615 7 to 581       575/581
(98 %)
0 diff
(100 %id)
CR613195 B cells (Ramos cell line) Cot 25-normalized .a 2042 to 2594 1 to 553       553/553
(100 %)
0 diff
(100 %id)
BX388207   .a 2042 to 2594 1 to 553   fully sequenced,   553/553
(100 %)
1 diff
(99.9 %id)
CA414524 Chondrosarcoma Grade II, Left Pelvis .a 2046 to 2591 563 to 19   AAA   545/545
(100 %)
3 diff
(99.5 %id)
BM969733 lung, Primary Lung Epithelial Cells .a 2050 to 2591 560 to 19   AAA   542/542
(100 %)
2 diff
(99.7 %id)
BX440944 brain, fetal brain .a 2055 to 2594 1 to 540   fully sequenced,   540/540
(100 %)
2 diff
(99.7 %id)
BM893905 Islets of Langerhans, Pancreas .a 2056 to 2599 550 to 7       544/550
(98 %)
0 diff
(100 %id)
H22613 brain .a 2058 to 2448 1 to 396       396/396
(100 %)
7 diff
(98.3 %id)
AW665837 pooled .a 2058 to 2597 540 to 1       540/540
(100 %)
4 diff
(99.3 %id)
AI471995 pooled .a 2060 to 2591 550 to 19   AAA   532/532
(100 %)
0 diff
(100 %id)
AI741975 pooled .a 2060 to 2594 538 to 4       535/538
(99 %)
0 diff
(100 %id)
AI720824 colon .a 2071 to 2596 539 to 14   AAA   526/526
(100 %)
8 diff
(98.5 %id)
BM679065 eye, fetal eye .a 2074 to 2596 536 to 14   AAA   523/523
(100 %)
5 diff
(99.1 %id)
TI_154103597   .a 2076 to 2596 615 to 94   AAA   522/777
(67 %)
4 diff
(99.5 %id)
CV326475 nervous_normal .a 2080 to 2389 334 to 22     Submitted on the opposite strand 313/334
(93 %)
0 diff
(100 %id)
DW428188 Liver .a 2099 to 2358 17 to 276       260/276
(94 %)
7 diff
(97.5 %id)
AI128230 uterus .a 2103 to 2594 497 to 6       492/497
(98 %)
0 diff
(100 %id)
AI122798   .a 2104 to 2526 425 to 3       423/425
(99 %)
0 diff
(100 %id)
CA414467 Chondrosarcoma Grade II, Left Pelvis .a 2104 to 2591 506 to 19   AAA   488/488
(100 %)
1 diff
(99.8 %id)
R96173 pineal gland .a 2106 to 2455 1 to 359       359/364
(98 %)
14 diff
(96.2 %id)
BF112267 pooled .a 2107 to 2594 493 to 6       488/493
(98 %)
0 diff
(100 %id)
AI090194 uterus .a 2109 to 2591 481 to 1       481/481
(100 %)
1 diff
(99.8 %id)
AI095934 uterus .a 2111 to 2596 500 to 15   AAA   486/486
(100 %)
1 diff
(99.8 %id)
DB523432 testis .a 2118 to 2591 1 to 474     Submitted on the opposite strand 474/474
(100 %)
0 diff
(100 %id)
AA487470 lung .a 2120 to 2462 343 to 1       343/343
(100 %)
0 diff
(100 %id)
BF112223 pooled .a 2127 to 2594 473 to 6       468/473
(98 %)
0 diff
(100 %id)
BI467231 Pancreas, Purified pancreatic islet .a 2128 to 2591 485 to 22   AAA   464/464
(100 %)
0 diff
(100 %id)
BF112062 pooled .a 2128 to 2594 468 to 2       467/468
(99 %)
0 diff
(100 %id)
AW474775 lymph node, lymphoma, follicular mixed small and largecell .a 2129 to 2462 334 to 1       334/334
(100 %)
2 diff
(99.5 %id)
U56654 whole peripheral blood .a 2130 to 2507 387 to 1       387/396
(97 %)
23 diff
(94.2 %id)
DB566882 hypothalamus .a 2132 to 2596 1 to 465     Submitted on the opposite strand 465/465
(100 %)
1 diff
(99.8 %id)
AI742307 pooled .a 2134 to 2594 465 to 5       461/465
(99 %)
0 diff
(100 %id)
AI809949 pooled .a 2137 to 2597 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AI950299 2 pooled tumors (clear cell type), Kidney .a 2137 to 2591 471 to 17   AAA   455/455
(100 %)
3 diff
(99.4 %id)
BM141988 Islets of Langerhans, Pancreas .a 2137 to 2330 1 to 194   fully sequenced,   194/194
(100 %)
0 diff
(100 %id)
AU154879 ovary, tumor tissue .a 2139 to 2591 453 to 1       453/453
(100 %)
0 diff
(100 %id)
AW157607 brain, frontal lobe .a 2140 to 2462 323 to 1       323/323
(100 %)
0 diff
(100 %id)
DB571097 hypothalamus .a 2143 to 2615 1 to 473     Submitted on the opposite strand 473/473
(100 %)
0 diff
(100 %id)
DB575173 hypothalamus .a 2145 to 2615 1 to 471     Submitted on the opposite strand 471/471
(100 %)
0 diff
(100 %id)
CA952540.
matches multiple genes
Pancreas, Purified pancreatic islet .a 2146 to 2596 466 to 16   AAA also hits gene SBDSP1 451/451
(100 %)
10 diff
(97.8 %id)
AI160162 brain, glioblastoma (pooled) .a 2147 to 2594 449 to 2       448/449
(99 %)
0 diff
(100 %id)
BM126186 Islets of Langerhans, Pancreas .a 2147 to 2591 457 to 13   AAA   445/445
(100 %)
0 diff
(100 %id)
CA445834 Chondrosarcoma, Left Pelvis .a 2147 to 2596 468 to 19   AAA   450/460
(97 %)
1 diff
(99.8 %id)
DB553303 hypothalamus .a 2153 to 2590 1 to 438     Submitted on the opposite strand 438/439
(99 %)
2 diff
(99.6 %id)
AA669015 lung .a 2153 to 2462 310 to 1       310/310
(100 %)
0 diff
(100 %id)
AI467898 pooled .a 2157 to 2591 453 to 19   AAA   435/435
(100 %)
0 diff
(100 %id)
T39355 lung .a 2158 to 2338 1 to 184       184/184
(100 %)
3 diff
(98.4 %id)
CB178626 Pancreas, Purified pancreatic islet .a 2158 to 2594 442 to 6       437/442
(98 %)
0 diff
(100 %id)
BF344768 brain, glioblastoma with EGFR amplification .a 2162 to 2591 44 to 471   AAA   428/471
(90 %)
6 diff
(98.8 %id)
AI270663 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2164 to 2462 299 to 1       299/299
(100 %)
0 diff
(100 %id)
DB558841 hypothalamus .a 2165 to 2610 1 to 448     Submitted on the opposite strand 448/449
(99 %)
3 diff
(99.4 %id)
AA025525 heart .a 2166 to 2597 447 to 9       439/447
(98 %)
0 diff
(100 %id)
DB553594 hypothalamus .a 2168 to 2595 1 to 428     Submitted on the opposite strand 428/428
(100 %)
0 diff
(100 %id)
AA028934 uterus .a 2168 to 2591 428 to 1       428/428
(100 %)
4 diff
(99.1 %id)
DB563628 hypothalamus .a 2170 to 2613 1 to 441     Submitted on the opposite strand 441/441
(100 %)
10 diff
(97.8 %id)
DB554095 hypothalamus .a 2172 to 2591 1 to 420     Submitted on the opposite strand 420/420
(100 %)
0 diff
(100 %id)
DB553921.
matches multiple genes
hypothalamus .a 2179 to 2615 1 to 426     Submitted on the opposite strand, also hits gene SBDSP1 426/426
(100 %)
16 diff
(96.3 %id)
DB534886 hippocampus .a 2182 to 2595 1 to 415     Submitted on the opposite strand 415/416
(99 %)
2 diff
(99.6 %id)
BQ958598 carcinoma, cell line, Prostate .a 2184 to 2591 1 to 408   AAA   408/408
(100 %)
0 diff
(100 %id)
BQ919893 carcinoma, cell line, Prostate .a 2184 to 2591 1 to 408   AAA   408/408
(100 %)
2 diff
(99.6 %id)
AI286104 pooled .a 2187 to 2594 413 to 7       407/413
(98 %)
0 diff
(100 %id)
AI669783 Prostate .a 2187 to 2596 409 to 1       409/409
(100 %)
5 diff
(98.8 %id)
AI150927 brain, glioblastoma (pooled) .a 2193 to 2594 403 to 2       402/403
(99 %)
0 diff
(100 %id)
CA448228 Chondrosarcoma, Left Pubic Bone .a 2193 to 2591 417 to 19   AAA   399/399
(100 %)
0 diff
(100 %id)
BE440193 Trabecular meshwork .a 2196 to 2573 378 to 2       377/379
(99 %)
0 diff
(100 %id)
AW043889 pooled .a 2199 to 2589 396 to 6       391/396
(98 %)
0 diff
(100 %id)
AA564849 adrenal adenoma, adrenal gland .a 2200 to 2462 263 to 1       263/263
(100 %)
0 diff
(100 %id)
AI431317 aorta .a 2207 to 2615 455 to 47   AAA   409/409
(100 %)
0 diff
(100 %id)
AI432084 adenocarcinoma, Pancreas .a 2213 to 2462 249 to 1       249/249
(100 %)
6 diff
(97.6 %id)
AI866853 adenocarcinoma, Pancreas .a 2213 to 2462 250 to 1       250/250
(100 %)
0 diff
(100 %id)
AI923478 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2213 to 2462 250 to 1       250/250
(100 %)
0 diff
(100 %id)
AW236671 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .a 2213 to 2462 250 to 1       250/250
(100 %)
0 diff
(100 %id)
AW302566 brain, three pooled meningiomas .a 2213 to 2462 250 to 1       250/250
(100 %)
0 diff
(100 %id)
BF941208 dorsal root ganglia .a 2213 to 2462 250 to 1       250/250
(100 %)
0 diff
(100 %id)
AW272239 colon, moderately-differentiated adenocarcinoma .a 2215 to 2462 248 to 1       248/248
(100 %)
0 diff
(100 %id)
AA932576 carcinoid, lung .a 2218 to 2491 274 to 1       274/274
(100 %)
0 diff
(100 %id)
AA876265 pooled germ cell tumors .a 2227 to 2589 366 to 4       363/366
(99 %)
0 diff
(100 %id)
AL573902 placenta, Placenta Cot 25-normalized .a 2234 to 2563 331 to 1   fully sequenced,   331/331
(100 %)
1 diff
(99.7 %id)
CF529466 placenta .a 2235 to 2591 375 to 19   AAA   357/357
(100 %)
4 diff
(98.9 %id)
R19215.
matches multiple genes
whole brain .a 2237 to 2593 366 to 1     Submitted on the opposite strand, also hits gene ProSAPiP1 366/376
(97 %)
10 diff
(97.4 %id)
BF949219 nervous_normal .a 2239 to 2443 224 to 15       210/224
(93 %)
0 diff
(100 %id)
AA746600 pooled germ cell tumors .a 2241 to 2615 390 to 16   AAA   375/375
(100 %)
0 diff
(100 %id)
AW150208 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 2255 to 2462 208 to 1       208/208
(100 %)
0 diff
(100 %id)
BM784406 stomach .a 2256 to 2596 1 to 337   AAA   337/337
(100 %)
2 diff
(99.5 %id)
AI034059 parathyroid gland, parathyroid tumor .a 2258 to 2591 354 to 21   AAA   334/334
(100 %)
9 diff
(97.4 %id)
BE221056 malignant melanoma, metastatic to lymphnode, skin .a 2263 to 2462 200 to 1       200/200
(100 %)
0 diff
(100 %id)
BM673205 eye, eye anterior segment .a 2263 to 2591 347 to 19   AAA   329/329
(100 %)
5 diff
(98.5 %id)
BE714581 head_neck .a 2273 to 2592 319 to 2       318/319
(99 %)
0 diff
(100 %id)
BE714531 head_neck .a 2274 to 2599 8 to 333       326/333
(97 %)
6 diff
(98.2 %id)
DB558666 hypothalamus .a 2282 to 2615 1 to 334   AAA Submitted on the opposite strand 334/334
(100 %)
10 diff
(97.1 %id)
BP425311 small intestine .a 2283 to 2617 1 to 336     Submitted on the opposite strand 336/336
(100 %)
1 diff
(99.8 %id)
AW769013 colon, moderately-differentiated adenocarcinoma .a 2289 to 2462 174 to 1       174/174
(100 %)
0 diff
(100 %id)
AI431319 aorta .a 2293 to 2617 331 to 7   tiling clone,   325/331
(98 %)
0 diff
(100 %id)
AW889000 nervous_tumor .a 2294 to 2443 164 to 16       149/169
(88 %)
0 diff
(100 %id)
AW889006 nervous_tumor .a 2294 to 2454 165 to 6       160/170
(94 %)
0 diff
(100 %id)
AW889007 nervous_tumor .a 2294 to 2454 169 to 9       161/174
(92 %)
0 diff
(100 %id)
AA844331 parathyroid gland, parathyroid tumor .a 2295 to 2588 295 to 1       295/295
(100 %)
2 diff
(99.4 %id)
AI572774 adenocarcinoma, Pancreas .a 2299 to 2462 164 to 1       164/164
(100 %)
0 diff
(100 %id)
BM141719 Islets of Langerhans, Pancreas .a 2300 to 2592 293 to 1   fully sequenced,   293/293
(100 %)
0 diff
(100 %id)
AI244940 Kidney .a 2302 to 2597 297 to 3       295/297
(99 %)
0 diff
(100 %id)
BM784572 lymph node, stomach .a 2323 to 2591 1 to 269   AAA   269/269
(100 %)
0 diff
(100 %id)
BF589332 pooled .a 2324 to 2594 274 to 4       271/274
(98 %)
0 diff
(100 %id)
AA668506   .a 2328 to 2472 145 to 1       145/145
(100 %)
5 diff
(96.6 %id)
BM784674 stomach .a 2332 to 2591 1 to 260   AAA   260/260
(100 %)
0 diff
(100 %id)
DB367961   .a 2344 to 2597 258 to 5   to resequence,   254/258
(98 %)
0 diff
(100 %id)
CA335471 posterior tongue (pooled) .a 2358 to 2591 1 to 235   AAA   235/235
(100 %)
1 diff
(99.6 %id)
AA860575 parathyroid gland, parathyroid tumor .a 2367 to 2588 232 to 11   AAA   222/222
(100 %)
0 diff
(100 %id)
BU958070 mixed (pool of 40 RNAs) .a 2374 to 2591 1 to 218   AAA   218/218
(100 %)
1 diff
(99.6 %id)
DW421425 Liver .a 2375 to 2592 16 to 233   AAA   218/233
(93 %)
6 diff
(97.5 %id)
BX434901 brain, fetal brain .a 2377 to 2586 209 to 1   fully sequenced,   209/209
(100 %)
3 diff
(98.6 %id)
BX367338   .a 2409 to 2564 156 to 1   fully sequenced,   156/156
(100 %)
1 diff
(99.4 %id)
AA335548 epididymis .a 2415 to 2596 1 to 182       182/182
(100 %)
1 diff
(99.5 %id)
AW960601   .a 2437 to 2596 1 to 160   AAA   160/160
(100 %)
0 diff
(100 %id)
R13183 whole brain .a 2440 to 2593 154 to 1     Submitted on the opposite strand 154/156
(98 %)
2 diff
(98.8 %id)
GD161091.
matches multiple genes
  .a 2462 to 2611 1 to 150   AAA also hits gene SBDSP1 150/150
(100 %)
8 diff
(94.7 %id)
BQ884062 dorsal root ganglia .b 1 to 910 29 to 942 A20S K49R G142R I156L L165S ... tiling clone,   914/943
(96 %)
29 diff
(97.0 %id)
BM509782 Pancreas, Purified pancreatic islet .b 97 to 583 1 to 487   tiling clone,   487/487
(100 %)
1 diff
(99.8 %id)
CB132689 Liver .c 1 to 514 18 to 541 exact AAA   540/541
(99 %)
56 diff
(89.7 %id)
BG982140 colon_normal .c 409 to 574 166 to 1       166/166
(100 %)
6 diff
(96.4 %id)
AA044743.
matches multiple genes
uterus P1.e 967 to 1574 600 to 1     also hits gene SBDSP1 600/680
(88 %)
12 diff
(98.3 %id)
CA952763.
matches multiple genes
Pancreas, Purified pancreatic islet P1.e 981 to 1351 1 to 374     also hits gene SBDSP1 374/374
(100 %)
17 diff
(95.5 %id)
EH347175.
matches multiple genes
  P1.e 1001 to 1083 1 to 83     also hits gene SBDSP1 83/83
(100 %)
0 diff
(100 %id)
DB553921.
matches multiple genes
hypothalamus P1.e 1156 to 1593 1 to 426     Submitted on the opposite strand, also hits gene SBDSP1 426/426
(100 %)
15 diff
(96.5 %id)
GD161091.
matches multiple genes
  P1.e 1440 to 1589 1 to 150   AAA also hits gene SBDSP1 150/150
(100 %)
8 diff
(94.7 %id)
CD171708 testis Gene SBDS, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI