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Gene RTN3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
533 supporting clones for gene RTN3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC343645 thalamus RTN3.a 1 to 664 1 to 664   tiling clone,   664/664
(100 %)
1 diff
(99.9 %id)
DC310053 cerebellum RTN3.a 89 to 624 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
DC324702 brain RTN3.a 93 to 690 1 to 598       598/598
(100 %)
2 diff
(99.7 %id)
DC329800 hippocampus RTN3.a 93 to 601 1 to 509       509/509
(100 %)
1 diff
(99.9 %id)
AY750848   RTN3.a 124 to 5060 1 to 4937 exact tiling clone,   4937/4937
(100 %)
0 diff
(100 %id)
DC324364 brain RTN3.a 133 to 731 1 to 599       599/599
(100 %)
1 diff
(99.9 %id)
DC335161 hippocampus RTN3.a 137 to 725 1 to 589       589/589
(100 %)
1 diff
(99.9 %id)
DC335846 hippocampus RTN3.a 140 to 716 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
AK304100 trachea RTN3.a 141 to 3601 1 to 3462 V471A     3462/3462
(100 %)
2 diff
(100.0 %id)
DC310249 cerebellum RTN3.a 141 to 676 1 to 537       537/537
(100 %)
2 diff
(99.7 %id)
DC317840 amygdala RTN3.a 141 to 732 1 to 593       593/593
(100 %)
1 diff
(99.9 %id)
DC318185 amygdala RTN3.a 141 to 739 1 to 599       599/599
(100 %)
0 diff
(100 %id)
DC321460 brain RTN3.a 141 to 772 1 to 632       632/632
(100 %)
1 diff
(99.9 %id)
DC322573 brain RTN3.a 141 to 701 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DC322987 brain RTN3.a 141 to 672 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
DC323851 brain RTN3.a 141 to 735 1 to 595       595/595
(100 %)
1 diff
(99.9 %id)
DC333245 hippocampus RTN3.a 141 to 720 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC343726 thalamus RTN3.a 141 to 706 1 to 566       566/566
(100 %)
1 diff
(99.9 %id)
DC343773 thalamus RTN3.a 141 to 682 1 to 542       542/542
(100 %)
0 diff
(100 %id)
DC400145 testis RTN3.a 141 to 673 1 to 533       533/533
(100 %)
0 diff
(100 %id)
DC416099 trachea RTN3.a 141 to 643 1 to 503       503/503
(100 %)
0 diff
(100 %id)
DC335007 hippocampus RTN3.a 142 to 729 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC335062 hippocampus RTN3.a 142 to 728 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DC317713 amygdala RTN3.a 144 to 722 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC351350 brain RTN3.a 144 to 709 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC321536 brain RTN3.a 146 to 711 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
DC324461 brain RTN3.a 146 to 724 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC333682 hippocampus RTN3.a 152 to 714 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC318083 amygdala RTN3.a 167 to 750 1 to 585       585/585
(100 %)
1 diff
(99.9 %id)
DC322435 brain RTN3.a 249 to 810 1 to 563       563/563
(100 %)
2 diff
(99.7 %id)
AK094965 hippocampus RTN3.a 1426 to 5060 1 to 3637   available from FLJ,   3637/3637
(100 %)
8 diff
(99.8 %id)
DA289283 hippocampus RTN3.a 1427 to 1981 2 to 556   capped   555/555
(100 %)
4 diff
(99.3 %id)
AK122727 brain RTN3.a 2026 to 5060 1 to 3034   available from FLJ,   3034/3034
(100 %)
4 diff
(99.9 %id)
DA533717 brain RTN3.a 2027 to 2593 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DB307573 hippocampus RTN3.a 4812 to 5058 252 to 3       250/252
(99 %)
0 diff
(100 %id)
DB317818 brain RTN3.a 4812 to 5058 251 to 3       249/251
(99 %)
0 diff
(100 %id)
NM_201428.1   RTN3.b 1 to 4896 1 to 4896 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4896/4896
(100 %)
0 diff
(100 %id)
AY427821   RTN3.b 34 to 4913 1 to 4880 exact tiling clone,   4880/4880
(100 %)
0 diff
(100 %id)
AK307811 brain RTN3.b 51 to 3683 1 to 3630 A6E Q92L P93F I94*     3630/3630
(100 %)
7 diff
(99.9 %id)
DA211699 brain RTN3.b 52 to 621 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DR001432 fetal brain RTN3.b 92 to 906 1 to 815       815/815
(100 %)
9 diff
(98.9 %id)
BE622423.
matches multiple genes
melanotic melanoma, skin, Skin, melanotic melanoma. RTN3.b 116 to 802 1 to 700   available from MGC, Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base), also hits gene MPV17 700/1087
(64 %)
29 diff
(97.4 %id)
BP200429 amygdala RTN3.b 123 to 705 1 to 581       581/581
(100 %)
11 diff
(98.2 %id)
AK127079 brain RTN3.b 305 to 4896 1 to 4591   available from FLJ, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 4591/4591
(100 %)
3 diff
(100.0 %id)
DA240711 brain RTN3.b 306 to 878 2 to 575   capped Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 574/575
(99 %)
5 diff
(99.2 %id)
DA396711 thalamus RTN3.b 466 to 1015 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA230219 brain RTN3.b 1007 to 1565 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA339027 hippocampus RTN3.b 1081 to 1650 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BI036827 nervous_tumor RTN3.b 1098 to 1486 1 to 388       388/388
(100 %)
5 diff
(98.8 %id)
DA212684 brain RTN3.b 1225 to 1681 2 to 458   capped   457/457
(100 %)
1 diff
(99.8 %id)
DA240250 brain RTN3.b 1237 to 1721 2 to 487   capped   486/486
(100 %)
1 diff
(99.8 %id)
DA094280 cerebellum RTN3.b 1240 to 1799 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA800167 brain RTN3.b 1246 to 1804 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA218031 brain RTN3.b 1250 to 1809 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA110214 cerebellum RTN3.b 1260 to 1825 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA418598 thalamus RTN3.b 1274 to 1956 2 to 683   capped   682/684
(99 %)
3 diff
(99.6 %id)
BF748595 breast_normal RTN3.b 1752 to 2098 37 to 381       345/381
(90 %)
6 diff
(98.5 %id)
AW904954 nervous_normal RTN3.b 1805 to 1944 140 to 1       140/144
(97 %)
0 diff
(100 %id)
AW500492 lymph RTN3.b 1849 to 2332 1 to 484       484/484
(100 %)
3 diff
(99.4 %id)
TI_154154679   RTN3.b 1856 to 2352 79 to 575       497/497
(100 %)
1 diff
(99.8 %id)
AA985144 schizophrenic brain S-11 frontal lobe RTN3.b 1932 to 2234 303 to 1       303/303
(100 %)
0 diff
(100 %id)
DA179723 amygdala RTN3.b 2074 to 2548 2 to 475   capped   474/475
(99 %)
2 diff
(99.6 %id)
R35391 whole brain RTN3.b 2253 to 2662 1 to 424       424/438
(96 %)
18 diff
(95.9 %id)
R14099 whole brain RTN3.b 2285 to 2636 1 to 371       371/385
(96 %)
25 diff
(93.6 %id)
R39968 whole brain RTN3.b 3749 to 4100 370 to 14   AAA   357/359
(99 %)
10 diff
(97.3 %id)
DB305901 brain RTN3.b 4384 to 4896 529 to 17   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 513/513
(100 %)
0 diff
(100 %id)
AK309766 brain RTN3.c 1 to 3123 2 to 3124 S10P V359A V718E tiling clone,   3124/3124
(100 %)
3 diff
(100.0 %id)
DA771670 brain RTN3.c 1 to 568 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
AK295758 hippocampus RTN3.c 42 to 3298 17 to 3273 V359A K785R tiling clone,   3257/3257
(100 %)
2 diff
(100.0 %id)
DA327982 hippocampus RTN3.c 42 to 574 17 to 550   capped   534/534
(100 %)
1 diff
(99.9 %id)
DC368882   RTN3.d 1 to 574 2 to 575   tiling clone,   575/575
(100 %)
0 diff
(100 %id)
DC329785 hippocampus RTN3.d 8 to 556 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
DA182226 amygdala RTN3.d 27 to 594 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
BG702651 brain, hippocampus RTN3.d 27 to 872 1 to 842       842/844
(99 %)
17 diff
(98.0 %id)
NM_201429.1   RTN3.d 30 to 2651 1 to 2622 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2622/2622
(100 %)
0 diff
(100 %id)
DA210783 brain RTN3.d 33 to 598 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA533008 brain RTN3.d 33 to 609 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DB494438 hypothalamus RTN3.d 50 to 555 1 to 506       506/506
(100 %)
2 diff
(99.7 %id)
DA175432 amygdala RTN3.d 62 to 623 2 to 563   capped   562/570
(98 %)
0 diff
(100 %id)
BF966533 brain, hippocampus RTN3.d 75 to 761 1 to 684       684/933
(73 %)
26 diff
(97.3 %id)
BI545260 brain, hippocampus RTN3.d 75 to 789 1 to 715       715/715
(100 %)
13 diff
(98.2 %id)
BI548560 brain, hippocampus RTN3.d 75 to 668 1 to 594       594/594
(100 %)
10 diff
(98.4 %id)
BI550694 brain, hippocampus RTN3.d 75 to 771 1 to 696       696/872
(79 %)
16 diff
(98.2 %id)
BI603937 brain, hypothalamus RTN3.d 75 to 879 1 to 805       805/884
(91 %)
23 diff
(97.4 %id)
BI603736 brain, hypothalamus RTN3.d 75 to 880 1 to 805       805/811
(99 %)
18 diff
(97.8 %id)
DB465887 hippocampus RTN3.d 76 to 495 1 to 418       418/418
(100 %)
9 diff
(97.9 %id)
DB477117 hippocampus RTN3.d 76 to 572 1 to 497       497/497
(100 %)
3 diff
(99.4 %id)
DA176988 amygdala RTN3.d 77 to 603 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DA695004   RTN3.d 77 to 639 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB464358 hippocampus RTN3.d 80 to 505 1 to 428       430/428
(100 %)
23 diff
(94.7 %id)
DB475170 hippocampus RTN3.d 80 to 550 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
DB493417 hypothalamus RTN3.d 80 to 571 1 to 492       492/492
(100 %)
1 diff
(99.8 %id)
TI_44165337   RTN3.d 80 to 789 87 to 796       710/796
(89 %)
8 diff
(99.0 %id)
TI_44168602   RTN3.d 80 to 668 124 to 712       589/712
(82 %)
11 diff
(98.5 %id)
TI_45210187   RTN3.d 80 to 879 123 to 922       800/1001
(79 %)
23 diff
(97.8 %id)
TI_45215498   RTN3.d 80 to 880 123 to 922       800/928
(86 %)
20 diff
(97.9 %id)
BP307909 brain RTN3.d 80 to 662 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA060822 cerebellum RTN3.d 81 to 628 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA085924 cerebellum RTN3.d 81 to 584 2 to 506   capped   505/505
(100 %)
2 diff
(99.7 %id)
DA146262 amygdala RTN3.d 81 to 565 2 to 486   capped   485/485
(100 %)
2 diff
(99.6 %id)
DA156408 amygdala RTN3.d 81 to 611 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DA161452 amygdala RTN3.d 81 to 644 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA170206 amygdala RTN3.d 81 to 619 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
DA199638 brain RTN3.d 81 to 623 2 to 544   capped   543/548
(99 %)
6 diff
(99.0 %id)
DA208774 brain RTN3.d 81 to 644 2 to 566   capped   565/565
(100 %)
6 diff
(99.0 %id)
DA264217 caudate nucleus RTN3.d 81 to 637 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA282056 corpus callosum RTN3.d 81 to 646 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA296534 hippocampus RTN3.d 81 to 635 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA296694 hippocampus RTN3.d 81 to 653 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA302452 hippocampus RTN3.d 81 to 666 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA302494 hippocampus RTN3.d 81 to 677 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA347201 substantia nigra RTN3.d 81 to 625 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA504405 brain RTN3.d 81 to 651 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA519564 brain RTN3.d 81 to 626 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA527421 brain RTN3.d 81 to 672 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
DA533558 brain RTN3.d 81 to 646 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA770201 brain RTN3.d 81 to 643 2 to 565   capped   564/564
(100 %)
3 diff
(99.5 %id)
DA772871 brain RTN3.d 81 to 648 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
BP214070 cerebrum RTN3.d 82 to 650 1 to 569       569/569
(100 %)
1 diff
(99.9 %id)
DB257747 uterus RTN3.d 82 to 656 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA301361 hippocampus RTN3.d 83 to 663 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA519604 brain RTN3.d 83 to 640 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA283595 corpus callosum RTN3.d 84 to 637 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA079645 cerebellum RTN3.d 86 to 645 2 to 565   capped   564/564
(100 %)
4 diff
(99.3 %id)
DA297974 hippocampus RTN3.d 86 to 657 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA341236 substantia nigra RTN3.d 86 to 623 2 to 541   capped   540/549
(98 %)
3 diff
(99.5 %id)
DA361467 subthalamic nucleus RTN3.d 90 to 646 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AK295361 corpus callosum RTN3.d 125 to 1572 1 to 1448 exact tiling clone,   1448/1448
(100 %)
0 diff
(100 %id)
DC328252 corpus callosum RTN3.d 125 to 678 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DA522436 brain RTN3.d 135 to 699 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA308130 hippocampus RTN3.d 206 to 801 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA515763 brain RTN3.d 212 to 752 2 to 543   capped   542/542
(100 %)
2 diff
(99.7 %id)
BP195359 brain RTN3.d 213 to 788 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DA169081 amygdala RTN3.d 327 to 890 9 to 572   capped   564/571
(98 %)
6 diff
(99.0 %id)
DA259565 caudate nucleus RTN3.d 414 to 972 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DC337774 substantia nigra RTN3.e 1 to 566 1 to 567   tiling clone,   567/567
(100 %)
1 diff
(99.9 %id)
DC331431 hippocampus RTN3.e 103 to 692 1 to 590   tiling clone,   590/590
(100 %)
0 diff
(100 %id)
DC376259 brain RTN3.e 111 to 576 1 to 466       466/466
(100 %)
0 diff
(100 %id)
NM_201430.1   RTN3.e 133 to 2638 1 to 2506 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2506/2506
(100 %)
0 diff
(100 %id)
TI_44345829   RTN3.e 153 to 743 88 to 679       592/845
(70 %)
15 diff
(98.3 %id)
TI_45213271   RTN3.e 183 to 985 130 to 935       804/937
(85 %)
18 diff
(98.1 %id)
BX460777 brain, fetal brain RTN3.e 193 to 1078 1 to 884 A2R E3S P4V S5G A6X ... tiling clone,   884/884
(100 %)
2 diff
(99.8 %id)
BE868732 adenocarcinoma, colon RTN3.e 583 to 1193 1 to 612       612/616
(99 %)
9 diff
(98.6 %id)
BP365100 lung RTN3.e 733 to 1313 1 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DC341387 thalamus RTN3.f 1 to 579 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DC366135   RTN3.f 2 to 552 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC375307 brain RTN3.f 2 to 571 1 to 570   tiling clone,   570/571
(99 %)
1 diff
(99.9 %id)
BP360599 thalamus RTN3.f 6 to 587 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA144883 amygdala RTN3.f 7 to 410 2 to 405   capped   404/404
(100 %)
0 diff
(100 %id)
DA159884 amygdala RTN3.f 7 to 538 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA177354 amygdala RTN3.f 7 to 486 2 to 481   capped   480/480
(100 %)
0 diff
(100 %id)
DA208948 brain RTN3.f 7 to 579 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA298073 hippocampus RTN3.f 7 to 590 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA353811 substantia nigra RTN3.f 7 to 568 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA750213   RTN3.f 7 to 587 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA790441 brain RTN3.f 7 to 507 2 to 502   capped   501/501
(100 %)
0 diff
(100 %id)
DB166975 kidney, tumor tissue RTN3.f 7 to 567 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB167601 kidney, tumor tissue RTN3.f 7 to 580 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DB169829 kidney, tumor tissue RTN3.f 7 to 564 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DB171130 kidney, tumor tissue RTN3.f 7 to 468 2 to 463   capped   462/462
(100 %)
0 diff
(100 %id)
BP249816 hippocampus RTN3.f 8 to 589 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA290600 hippocampus RTN3.f 9 to 614 2 to 607   capped   606/606
(100 %)
0 diff
(100 %id)
NM_006054.2   RTN3.f 10 to 2592 1 to 2583 exact RefSeq,   2583/2583
(100 %)
1 diff
(100.0 %id)
CB988827 Human Placenta, placenta RTN3.f 12 to 403 28 to 419       392/431
(90 %)
7 diff
(98.4 %id)
CB990297 Human Placenta, placenta RTN3.f 12 to 771 28 to 788       761/788
(96 %)
7 diff
(99.2 %id)
TI_44343848   RTN3.f 18 to 666 85 to 735       651/735
(88 %)
7 diff
(99.1 %id)
TI_44344489   RTN3.f 30 to 603 87 to 681       556/681
(81 %)
15 diff
(97.8 %id)
DA394981 thalamus RTN3.f 34 to 623 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
TI_44168643   RTN3.f 35 to 749 74 to 788       715/788
(90 %)
8 diff
(99.0 %id)
DB497932 hypothalamus RTN3.f 36 to 521 1 to 486       486/486
(100 %)
0 diff
(100 %id)
DB500360 hypothalamus RTN3.f 36 to 522 1 to 487       487/487
(100 %)
0 diff
(100 %id)
TI_44169117   RTN3.f 37 to 679 86 to 729       644/729
(88 %)
8 diff
(99.0 %id)
CR614599 neuroblastoma RTN3.f 39 to 1690 1 to 1652 exact     1652/1652
(100 %)
0 diff
(100 %id)
BX445914 brain, fetal brain RTN3.f 47 to 864 1 to 816       816/816
(100 %)
6 diff
(99.3 %id)
TI_44168914   RTN3.f 51 to 802 118 to 870       753/872
(86 %)
14 diff
(98.4 %id)
TI_44170205   RTN3.f 51 to 802 79 to 832       754/839
(89 %)
8 diff
(99.1 %id)
BI553368 brain, hippocampus RTN3.f 54 to 802 1 to 751       751/758
(99 %)
8 diff
(99.0 %id)
DB477383 hippocampus RTN3.f 56 to 537 1 to 482       482/482
(100 %)
0 diff
(100 %id)
TI_44167162   RTN3.f 56 to 743 125 to 813       689/813
(84 %)
12 diff
(98.6 %id)
TI_44167778   RTN3.f 56 to 802 87 to 835       747/840
(88 %)
25 diff
(97.1 %id)
TI_44171433   RTN3.f 56 to 810 98 to 855       758/918
(82 %)
21 diff
(97.8 %id)
TI_45213477   RTN3.f 56 to 806 128 to 879       752/879
(85 %)
10 diff
(98.9 %id)
TI_44344795   RTN3.f 56 to 637 81 to 674       594/796
(74 %)
28 diff
(96.5 %id)
CR606090 T cells (Jurkat cell line) RTN3.f 57 to 1724 1 to 1668 exact     1668/1668
(100 %)
0 diff
(100 %id)
BM147929 leukopheresis RTN3.f 59 to 421 1 to 365       365/406
(89 %)
9 diff
(97.8 %id)
AK075412   RTN3.f 60 to 2591 1 to 2530 exact     2530/2530
(100 %)
3 diff
(99.9 %id)
DA290604 hippocampus RTN3.f 60 to 658 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA350993 substantia nigra RTN3.f 60 to 649 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA386687 thalamus RTN3.f 60 to 650 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DA396901 thalamus RTN3.f 60 to 648 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA528938 brain RTN3.f 60 to 669 2 to 611   capped   610/610
(100 %)
0 diff
(100 %id)
DA529303 brain RTN3.f 60 to 671 2 to 613   capped   612/612
(100 %)
0 diff
(100 %id)
DB463441 hippocampus RTN3.f 60 to 338 1 to 280       280/419
(66 %)
5 diff
(98.9 %id)
DB472044 hippocampus RTN3.f 60 to 558 1 to 499       499/499
(100 %)
0 diff
(100 %id)
DB493734 hypothalamus RTN3.f 60 to 548 1 to 489       489/489
(100 %)
0 diff
(100 %id)
DB495611 hypothalamus RTN3.f 60 to 565 1 to 506       506/506
(100 %)
0 diff
(100 %id)
DB496259 hypothalamus RTN3.f 60 to 520 1 to 461       461/461
(100 %)
0 diff
(100 %id)
DB498894 hypothalamus RTN3.f 60 to 587 1 to 528       528/528
(100 %)
0 diff
(100 %id)
DB499533 hypothalamus RTN3.f 60 to 546 1 to 487       487/487
(100 %)
0 diff
(100 %id)
DB500759 hypothalamus RTN3.f 60 to 529 1 to 470       470/470
(100 %)
0 diff
(100 %id)
DB502117 hypothalamus RTN3.f 60 to 537 1 to 478       478/478
(100 %)
0 diff
(100 %id)
DB504694 hypothalamus RTN3.f 60 to 529 1 to 470       470/470
(100 %)
0 diff
(100 %id)
TI_44165652   RTN3.f 60 to 685 98 to 724       627/779
(80 %)
10 diff
(98.8 %id)
TI_44166195   RTN3.f 60 to 755 92 to 785       694/834
(83 %)
16 diff
(98.1 %id)
TI_44166200   RTN3.f 60 to 862 115 to 921       807/924
(87 %)
22 diff
(97.7 %id)
TI_44166319   RTN3.f 60 to 756 88 to 787       700/1006
(69 %)
17 diff
(98.4 %id)
TI_44166543   RTN3.f 60 to 802 87 to 828       742/893
(83 %)
16 diff
(98.3 %id)
TI_44166800   RTN3.f 60 to 921 88 to 961 R151V L152S L154W V155*     788/962
(81 %)
21 diff
(97.9 %id)
TI_44167263   RTN3.f 60 to 845 84 to 872       789/872
(90 %)
15 diff
(98.3 %id)
TI_44168030   RTN3.f 60 to 802 118 to 861       744/865
(86 %)
11 diff
(98.8 %id)
TI_44168972   RTN3.f 60 to 712 87 to 740       654/740
(88 %)
7 diff
(99.1 %id)
TI_44169768   RTN3.f 60 to 840 61 to 837       777/841
(92 %)
16 diff
(98.1 %id)
TI_44169803   RTN3.f 60 to 835 85 to 873       787/905
(86 %)
30 diff
(96.7 %id)
TI_44170371   RTN3.f 60 to 716 89 to 747       659/747
(88 %)
13 diff
(98.3 %id)
TI_44170569   RTN3.f 60 to 800 122 to 863       742/869
(85 %)
9 diff
(99.0 %id)
TI_44171335   RTN3.f 60 to 667 93 to 702       610/703
(86 %)
14 diff
(98.1 %id)
TI_44001025   RTN3.f 60 to 814 88 to 841       754/844
(89 %)
23 diff
(97.3 %id)
TI_45210235   RTN3.f 60 to 802 89 to 834       744/908
(81 %)
15 diff
(98.4 %id)
TI_45210276   RTN3.f 60 to 766 93 to 804       710/841
(84 %)
17 diff
(98.0 %id)
TI_45210415   RTN3.f 60 to 792 86 to 817       734/831
(88 %)
15 diff
(98.2 %id)
TI_45210449   RTN3.f 60 to 474 157 to 573       417/1255
(33 %)
11 diff
(99.2 %id)
TI_45211119   RTN3.f 60 to 832 88 to 860       773/861
(89 %)
12 diff
(98.7 %id)
TI_45211420   RTN3.f 60 to 802 120 to 870   AAA   751/927
(81 %)
25 diff
(97.4 %id)
TI_45211994   RTN3.f 60 to 754 89 to 784       696/976
(71 %)
12 diff
(98.8 %id)
TI_45212271   RTN3.f 60 to 713 90 to 742       653/742
(88 %)
7 diff
(99.1 %id)
TI_45212369   RTN3.f 60 to 706 77 to 724       647/724
(89 %)
18 diff
(97.6 %id)
TI_45215351   RTN3.f 60 to 716 113 to 770       658/770
(85 %)
8 diff
(99.0 %id)
TI_45215705   RTN3.f 60 to 819 87 to 851       765/917
(83 %)
23 diff
(97.5 %id)
TI_45216009   RTN3.f 60 to 860 85 to 880       796/935
(85 %)
25 diff
(97.4 %id)
TI_45216481   RTN3.f 60 to 668 128 to 735       608/736
(82 %)
8 diff
(99.0 %id)
TI_44342550   RTN3.f 60 to 591 125 to 659       535/660
(81 %)
12 diff
(98.2 %id)
TI_44343328   RTN3.f 60 to 533 89 to 578       490/687
(71 %)
26 diff
(96.3 %id)
TI_44343727   RTN3.f 60 to 685 93 to 725       633/856
(73 %)
20 diff
(97.7 %id)
TI_44343777   RTN3.f 60 to 860 87 to 889       803/1067
(75 %)
13 diff
(98.8 %id)
TI_44344249   RTN3.f 60 to 667 92 to 700       609/700
(87 %)
8 diff
(98.9 %id)
TI_44344900   RTN3.f 60 to 720 87 to 754       666/901
(73 %)
19 diff
(97.9 %id)
TI_44344933   RTN3.f 60 to 763 88 to 800       713/843
(84 %)
29 diff
(96.6 %id)
TI_44345801   RTN3.f 60 to 802 86 to 826       741/829
(89 %)
15 diff
(98.2 %id)
TI_44345872   RTN3.f 60 to 590 87 to 617       531/617
(86 %)
6 diff
(99.1 %id)
TI_44346250   RTN3.f 60 to 763 90 to 800       711/842
(84 %)
28 diff
(96.7 %id)
DA136196 alzheimer cortex RTN3.f 61 to 703 2 to 644   capped   643/643
(100 %)
0 diff
(100 %id)
DA252339 caudate nucleus RTN3.f 61 to 653 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA292238 hippocampus RTN3.f 61 to 650 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA307620 hippocampus RTN3.f 61 to 660 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA351423 substantia nigra RTN3.f 61 to 646 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA388317 thalamus RTN3.f 61 to 657 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA388367 thalamus RTN3.f 61 to 653 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA389885 thalamus RTN3.f 61 to 653 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA393831 thalamus RTN3.f 61 to 648 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA395114 thalamus RTN3.f 61 to 646 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA397074 thalamus RTN3.f 61 to 649 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA397714 thalamus RTN3.f 61 to 665 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
DA483331 brain RTN3.f 61 to 828 2 to 771   capped   770/771
(99 %)
8 diff
(99.0 %id)
DA527998 brain RTN3.f 61 to 658 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA528117 brain RTN3.f 61 to 661 2 to 602   capped   601/601
(100 %)
0 diff
(100 %id)
DA529205 brain RTN3.f 61 to 663 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
DA529600 brain RTN3.f 61 to 665 2 to 606   capped   605/605
(100 %)
0 diff
(100 %id)
DA529806 brain RTN3.f 61 to 669 2 to 610   capped   609/609
(100 %)
0 diff
(100 %id)
DA530271 brain RTN3.f 61 to 684 2 to 625   capped   624/625
(99 %)
1 diff
(99.9 %id)
DA531017 brain RTN3.f 61 to 675 2 to 616   capped   615/615
(100 %)
0 diff
(100 %id)
DA531446 brain RTN3.f 61 to 681 2 to 622   capped   621/621
(100 %)
0 diff
(100 %id)
DA592196 lung RTN3.f 61 to 652 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
TI_44166949   RTN3.f 61 to 742 125 to 804       680/804
(84 %)
8 diff
(99.1 %id)
DA673072   RTN3.f 61 to 660 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
DA675274   RTN3.f 61 to 648 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA676301   RTN3.f 61 to 657 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA692372   RTN3.f 61 to 646 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA787109 brain RTN3.f 61 to 651 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
DB203162 trachea RTN3.f 61 to 659 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA482431   RTN3.f 62 to 669 2 to 609   capped   608/608
(100 %)
0 diff
(100 %id)
DA735465   RTN3.f 62 to 920 2 to 861 V177G I196N K217X V220G A231X ... capped   860/860
(100 %)
6 diff
(99.4 %id)
BM153745 leukopheresis RTN3.f 62 to 525 1 to 464       464/464
(100 %)
7 diff
(98.5 %id)
CB155409 brain RTN3.f 63 to 717 1 to 655       655/655
(100 %)
0 diff
(100 %id)
BP310540 brain RTN3.f 63 to 650 1 to 588       588/588
(100 %)
0 diff
(100 %id)
TI_44166275   RTN3.f 64 to 722 91 to 748       658/748
(87 %)
7 diff
(99.1 %id)
TI_45210150   RTN3.f 64 to 859 92 to 884   AAA   793/1093
(72 %)
27 diff
(97.6 %id)
TI_45216409   RTN3.f 64 to 793 132 to 859       730/861
(84 %)
20 diff
(97.7 %id)
DA791274 brain RTN3.f 64 to 688 2 to 626   capped   625/625
(100 %)
0 diff
(100 %id)
DB198446 trachea RTN3.f 64 to 691 2 to 629   capped   628/628
(100 %)
0 diff
(100 %id)
AK308083   RTN3.f 65 to 1110 1 to 1046 A235G E236R     1046/1046
(100 %)
2 diff
(99.9 %id)
BM785625 Ascites, stomach RTN3.f 65 to 715 1 to 651       651/651
(100 %)
0 diff
(100 %id)
DA391924 thalamus RTN3.f 66 to 659 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
DA393676 thalamus RTN3.f 66 to 651 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA396501 thalamus RTN3.f 66 to 653 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
CR609229 Placenta Cot 25-normalized RTN3.f 66 to 1757 1 to 1692 exact     1692/1692
(100 %)
0 diff
(100 %id)
CR614083 Neuroblastoma Cot 10-normalized RTN3.f 66 to 1748 1 to 1683 exact     1683/1683
(100 %)
0 diff
(100 %id)
DA532010 brain RTN3.f 66 to 674 2 to 610   capped   609/609
(100 %)
0 diff
(100 %id)
DA736724   RTN3.f 66 to 895 2 to 831   capped   830/832
(99 %)
5 diff
(99.4 %id)
CR619650 fetal brain RTN3.f 67 to 1741 1 to 1675 exact     1675/1675
(100 %)
0 diff
(100 %id)
BQ721440 sympathetic trunk RTN3.f 68 to 802 1 to 736       736/1008
(73 %)
10 diff
(99.1 %id)
BQ722174 sympathetic trunk RTN3.f 68 to 943 1 to 879 V220G E221*     879/881
(99 %)
10 diff
(98.9 %id)
CD515297 White Matter RTN3.f 68 to 862 1 to 796   AAA   796/827
(96 %)
2 diff
(99.8 %id)
CD675212 eye, lens RTN3.f 69 to 706 1 to 638       638/638
(100 %)
0 diff
(100 %id)
BF983197 duodenal adenocarcinoma, cell line, small intestine RTN3.f 70 to 702 1 to 633       633/633
(100 %)
0 diff
(100 %id)
CX782348 human embryonic stem cells RTN3.f 70 to 916 1 to 847 K232X     847/847
(100 %)
0 diff
(100 %id)
AF119297   RTN3.f 71 to 2574 11 to 2513 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2503/2513
(99 %)
9 diff
(99.7 %id)
BM919666 pooled pancreas and spleen RTN3.f 71 to 802 9 to 741       733/1055
(69 %)
12 diff
(98.9 %id)
DA392788 thalamus RTN3.f 72 to 671 2 to 601   capped   600/600
(100 %)
0 diff
(100 %id)
AB209771 brain RTN3.f 73 to 1010 1 to 938 A75V     938/938
(100 %)
1 diff
(99.9 %id)
AF059524   RTN3.f 73 to 2574 1 to 2509 exact AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2509/2509
(100 %)
10 diff
(99.7 %id)
AK222898 Kidney RTN3.f 73 to 1162 1 to 1090 A6E     1090/1090
(100 %)
1 diff
(100.0 %id)
BM450258 eye, retinoblastoma RTN3.f 73 to 1048 1 to 985 I219L V220L E221K K222R I223S ...     985/988
(99 %)
19 diff
(98.1 %id)
CR607815 Placenta Cot 25-normalized RTN3.f 74 to 1740 1 to 1667 exact     1667/1667
(100 %)
0 diff
(100 %id)
BQ883455 dorsal root ganglia RTN3.f 74 to 988 1 to 923 V220G E221*     923/932
(99 %)
15 diff
(98.4 %id)
CR624616 adult brain RTN3.f 76 to 1765 1 to 1690 exact     1690/1690
(100 %)
0 diff
(100 %id)
CX163938 human embryonic stem cells differentiated toan early endodermal cell type RTN3.f 76 to 1027 1 to 952 exact     952/952
(100 %)
0 diff
(100 %id)
CV806578 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass RTN3.f 76 to 754 1 to 680       680/894
(76 %)
6 diff
(99.4 %id)
BU148681 eye, retinoblastoma RTN3.f 77 to 945 1 to 872 K202X E221*     872/873
(99 %)
8 diff
(99.1 %id)
CD721819 eye, lacrimal gland RTN3.f 77 to 695 1 to 619       619/619
(100 %)
0 diff
(100 %id)
CR592349 fetal brain RTN3.f 78 to 1685 1 to 1608 exact     1608/1608
(100 %)
0 diff
(100 %id)
CR601675 Placenta Cot 25-normalized RTN3.f 78 to 1721 1 to 1644 exact     1644/1644
(100 %)
0 diff
(100 %id)
CR609823 fetal liver RTN3.f 78 to 1778 1 to 1701 exact     1701/1701
(100 %)
0 diff
(100 %id)
BQ637719 eye, retina RTN3.f 78 to 706 1 to 629       629/629
(100 %)
0 diff
(100 %id)
CB053571 leiomyosarcoma, soft tissue RTN3.f 78 to 719 10 to 651       642/651
(98 %)
6 diff
(99.1 %id)
BM479411 eye, retinoblastoma RTN3.f 78 to 1092 1 to 1024 V220G E221*     1024/1055
(97 %)
26 diff
(97.6 %id)
CX165959 human embryonic stem cells differentiated toan early endodermal cell type RTN3.f 78 to 881 1 to 804       804/804
(100 %)
0 diff
(100 %id)
CX786210 human embryonic stem cells RTN3.f 78 to 887 1 to 810       810/810
(100 %)
0 diff
(100 %id)
CX163401 human embryonic stem cells differentiated toan early endodermal cell type RTN3.f 78 to 896 1 to 819       819/820
(99 %)
1 diff
(99.9 %id)
TI_43961376   RTN3.f 78 to 793 64 to 772       709/772
(91 %)
17 diff
(97.8 %id)
BC100822 PCR rescued clones RTN3.f 80 to 2296 1 to 2217 exact     2217/2217
(100 %)
0 diff
(100 %id)
BC100823 PCR rescued clones RTN3.f 80 to 2296 1 to 2217 exact     2217/2217
(100 %)
0 diff
(100 %id)
BC118628 PCR rescued clones RTN3.f 80 to 2296 1 to 2217 exact     2217/2217
(100 %)
0 diff
(100 %id)
BC118550 PCR rescued clones RTN3.f 80 to 2296 1 to 2217 exact     2217/2217
(100 %)
0 diff
(100 %id)
ES313713 beard hair, skin RTN3.f 81 to 595 1 to 513       513/513
(100 %)
4 diff
(99.3 %id)
ES313993 beard hair, skin RTN3.f 83 to 312 1 to 230       230/230
(100 %)
5 diff
(97.9 %id)
CX757807 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass RTN3.f 83 to 833 1 to 751     Submitted on the opposite strand 751/751
(100 %)
0 diff
(100 %id)
DA065144 cerebellum RTN3.f 87 to 653 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA281253 corpus callosum RTN3.f 87 to 670 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
CN405929 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 RTN3.f 87 to 733 1 to 647       647/647
(100 %)
0 diff
(100 %id)
ES309298 occipital hair of pubic hypotrichosispatient, skin RTN3.f 87 to 547 28 to 483       456/739
(61 %)
10 diff
(98.7 %id)
DA487342 brain RTN3.f 87 to 667 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA692765   RTN3.f 87 to 645 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
ES308135 beard hair, skin RTN3.f 88 to 271 1 to 180       180/180
(100 %)
6 diff
(96.7 %id)
BQ049179 lymph, lymphoma, cell line RTN3.f 95 to 946 1 to 860 R213P D214R Q215I T216D K217Q ...     860/1023
(84 %)
15 diff
(98.6 %id)
BE780794 eye, retinoblastoma RTN3.f 97 to 755 1 to 661       661/1051
(62 %)
3 diff
(99.8 %id)
BM452809 lymph, lymphoma, cell line RTN3.f 97 to 1030 1 to 946 exact     946/1046
(90 %)
20 diff
(98.1 %id)
BC105982 Eye, retinoblastoma RTN3.f 98 to 2574 1 to 2476 exact AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2476/2476
(100 %)
1 diff
(100.0 %id)
DA940031 Spleen RTN3.f 98 to 685 2 to 589   capped   588/596
(98 %)
0 diff
(100 %id)
CX758361 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass RTN3.f 99 to 800 1 to 697     Submitted on the opposite strand 697/743
(93 %)
7 diff
(99.1 %id)
BQ213605 embryonal carcinoma, cell line, testis RTN3.f 100 to 971 1 to 879 R213P D214R Q215S T216D K217Q ...     879/879
(100 %)
9 diff
(99.0 %id)
BU165190 eye, retinoblastoma RTN3.f 100 to 897 1 to 809       809/852
(94 %)
17 diff
(98.1 %id)
CN483761 eye RTN3.f 105 to 719 1 to 615       615/615
(100 %)
0 diff
(100 %id)
AA134519 colon, tumor RTN3.f 111 to 611 1 to 513       511/518
(98 %)
29 diff
(94.5 %id)
BQ436517 large cell carcinoma, lung RTN3.f 113 to 993 1 to 885 K217Q S218A V220C E221*     885/886
(99 %)
12 diff
(98.7 %id)
CN405924 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells RTN3.f 116 to 787 1 to 672       672/672
(100 %)
0 diff
(100 %id)
CN405919 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells RTN3.f 129 to 788 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BC105981 Eye, retinoblastoma RTN3.f 129 to 2574 1 to 2446 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2446/2446
(100 %)
0 diff
(100 %id)
BU181705 eye, retinoblastoma RTN3.f 130 to 763 1 to 636       636/894
(71 %)
14 diff
(98.5 %id)
DA642333 Liver RTN3.f 161 to 794 2 to 635   capped   634/634
(100 %)
0 diff
(100 %id)
DA344756 substantia nigra RTN3.f 162 to 750 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BM149362 leukopheresis RTN3.f 167 to 464 1 to 298       298/298
(100 %)
10 diff
(96.7 %id)
DA306023 hippocampus RTN3.f 169 to 755 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BQ223929 embryonal carcinoma, cell line, testis RTN3.f 172 to 1055 1 to 888 I196D V197C Y198L E199*     888/888
(100 %)
18 diff
(98.0 %id)
DA619849   RTN3.f 173 to 760 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA865596 Prostate RTN3.f 175 to 711 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BM465749 eye, retinoblastoma RTN3.f 178 to 1102 1 to 936 exact     936/1007
(92 %)
14 diff
(98.7 %id)
TI_44168352   RTN3.f 182 to 879 86 to 786       701/789
(88 %)
10 diff
(98.8 %id)
BJ989926 hepatoblastoma RTN3.f 184 to 769 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DA531216 brain RTN3.f 186 to 778 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BQ889111 dorsal root ganglia RTN3.f 189 to 1151 1 to 978 exact     978/978
(100 %)
37 diff
(96.3 %id)
BY996471   RTN3.f 190 to 840 8 to 658       651/658
(98 %)
5 diff
(99.3 %id)
TI_1948072756   RTN3.f 191 to 398 143 to 350       208/231
(90 %)
6 diff
(97.5 %id)
TI_1948073026   RTN3.f 191 to 403 122 to 334       213/235
(90 %)
6 diff
(97.5 %id)
TI_1948073295   RTN3.f 191 to 395 130 to 334       205/228
(89 %)
7 diff
(97.0 %id)
TI_1948073559   RTN3.f 191 to 401 125 to 335       211/233
(90 %)
10 diff
(95.8 %id)
BM468819 duodenal adenocarcinoma, cell line, small intestine RTN3.f 195 to 1009 1 to 828 I230N A231R K232Q A235G E236R     828/961
(86 %)
20 diff
(98.0 %id)
CV023459 mixed RTN3.f 197 to 832 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
CR602829 T cells (Jurkat cell line) Cot10-normalized RTN3.f 201 to 1749 1 to 1549       1549/1549
(100 %)
0 diff
(100 %id)
CN405946 embryonic stem cells, DMSO-treated H9 cellline RTN3.f 264 to 1019 1 to 756       756/756
(100 %)
0 diff
(100 %id)
TI_44167798   RTN3.f 338 to 800 346 to 808       463/876
(52 %)
21 diff
(97.7 %id)
TI_1948073560   RTN3.f 338 to 906 698 to 130       569/1359
(41 %)
0 diff
(100 %id)
TI_1948073561   RTN3.f 338 to 906 701 to 126       576/1131
(50 %)
20 diff
(98.3 %id)
BY996557   RTN3.f 372 to 1040 14 to 682       669/682
(98 %)
6 diff
(99.2 %id)
TI_1948073028   RTN3.f 391 to 906 657 to 132   AAA   526/1180
(44 %)
23 diff
(98.1 %id)
BI255902 cervical carcinoma cell line, cervix RTN3.f 424 to 1322 1 to 901       901/907
(99 %)
32 diff
(96.5 %id)
BY996394   RTN3.f 452 to 1112 17 to 677       661/677
(97 %)
9 diff
(98.7 %id)
BU944568 adenocarcinoma, cell line, breast RTN3.f 454 to 1312 1 to 861       861/861
(100 %)
2 diff
(99.8 %id)
AW363734 colon RTN3.f 472 to 592 5 to 125       121/125
(96 %)
7 diff
(94.4 %id)
BM451322 eye, retinoblastoma RTN3.f 487 to 1344 1 to 865       865/1031
(83 %)
16 diff
(98.5 %id)
BG697882 skin RTN3.f 496 to 1323 1 to 829       829/829
(100 %)
3 diff
(99.7 %id)
BI004828 head_normal RTN3.f 507 to 758 1 to 262       260/307
(84 %)
25 diff
(91.9 %id)
BM851578 stomach RTN3.f 510 to 1112 1 to 603       603/603
(100 %)
0 diff
(100 %id)
TI_1948073027   RTN3.f 564 to 906 472 to 130       343/370
(92 %)
0 diff
(100 %id)
TI_44171256   RTN3.f 570 to 1321 98 to 855       758/938
(80 %)
16 diff
(98.3 %id)
TI_1948073296   RTN3.f 581 to 906 454 to 130       325/352
(92 %)
0 diff
(100 %id)
BY996536   RTN3.f 605 to 1287 20 to 702       683/702
(97 %)
6 diff
(99.2 %id)
DA531187 brain RTN3.f 607 to 1202 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
AW952350   RTN3.f 608 to 1282 1 to 675       675/681
(99 %)
4 diff
(99.5 %id)
TI_1948072757   RTN3.f 612 to 906 423 to 129       295/322
(91 %)
0 diff
(100 %id)
EL954003 eyeball RTN3.f 619 to 770 1 to 152       152/152
(100 %)
5 diff
(96.8 %id)
BY996919   RTN3.f 620 to 1196 10 to 586       577/586
(98 %)
0 diff
(100 %id)
DT216899 brain RTN3.f 640 to 1419 1 to 779       779/779
(100 %)
5 diff
(99.4 %id)
CX871126 embryonic stem RTN3.f 656 to 1415 1 to 760       760/760
(100 %)
0 diff
(100 %id)
CA396609 eye, RPE/choroid RTN3.f 662 to 1283 1 to 622       622/622
(100 %)
0 diff
(100 %id)
TI_44346282   RTN3.f 684 to 1470 125 to 911       787/913
(86 %)
15 diff
(98.4 %id)
BF793305 adrenal cortex carcinoma, cell line, adrenal gland RTN3.f 701 to 1473 1 to 781       781/913
(85 %)
21 diff
(97.7 %id)
AA417901.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus RTN3.f 740 to 893 154 to 1     also hits gene LOC152905 154/154
(100 %)
5 diff
(96.8 %id)
BX441811 brain, fetal brain RTN3.f 755 to 1647 1 to 893       893/893
(100 %)
0 diff
(100 %id)
FN098972 breast carcinoma RTN3.f 777 to 844 1 to 68       68/68
(100 %)
4 diff
(94.2 %id)
EH306712   RTN3.f 827 to 885 1 to 59       59/59
(100 %)
4 diff
(93.3 %id)
TI_154162690   RTN3.f 830 to 1521 80 to 778       699/1166
(59 %)
19 diff
(98.4 %id)
BY994132   RTN3.f 840 to 1595 1 to 756       756/756
(100 %)
5 diff
(99.4 %id)
AV718373 hypothalamus RTN3.f 909 to 1623 1 to 714       714/714
(100 %)
1 diff
(99.9 %id)
TI_149300917   RTN3.f 913 to 1775 932 to 84   AAA   849/962
(88 %)
23 diff
(97.7 %id)
TI_154061008   RTN3.f 935 to 1775 947 to 124   AAA   824/920
(89 %)
23 diff
(97.5 %id)
BF982296 duodenal adenocarcinoma, cell line, small intestine RTN3.f 936 to 1702 1 to 762       762/775
(98 %)
13 diff
(98.4 %id)
BM983059 lung, Primary Lung Cystic Fibrosis EpithelialCells RTN3.f 972 to 1752 789 to 17   AAA   773/837
(92 %)
11 diff
(98.7 %id)
TI_149295927   RTN3.f 979 to 1752 850 to 85   AAA   766/946
(80 %)
36 diff
(96.2 %id)
CF123008 CNCAP(3)T-225 cell line, Prostate RTN3.f 983 to 1597 8 to 622       615/622
(98 %)
6 diff
(99.1 %id)
TI_154182754   RTN3.f 983 to 1866 77 to 954       878/913
(96 %)
16 diff
(98.3 %id)
TI_159723678   RTN3.f 986 to 1752 839 to 77   AAA   763/983
(77 %)
18 diff
(98.2 %id)
CX782270 human embryonic stem cells RTN3.f 1012 to 1751 768 to 29   AAA   740/740
(100 %)
2 diff
(99.8 %id)
TI_149298296   RTN3.f 1015 to 1752 818 to 84   AAA   735/908
(80 %)
5 diff
(99.5 %id)
GD136815   RTN3.f 1019 to 1302 283 to 6     Submitted on the opposite strand 278/283
(98 %)
0 diff
(100 %id)
CA434603 lung, Lung Focal Fibrosis RTN3.f 1019 to 1356 1 to 331   AAA Submitted on the opposite strand 331/331
(100 %)
6 diff
(98.2 %id)
GD136773   RTN3.f 1022 to 1302 286 to 6     Submitted on the opposite strand 281/287
(97 %)
0 diff
(100 %id)
TI_149296600   RTN3.f 1024 to 1820 877 to 83   AAA   795/944
(84 %)
6 diff
(99.4 %id)
CA427240 Bone, Subchondral Bone RTN3.f 1041 to 1752 730 to 19   AAA   712/712
(100 %)
0 diff
(100 %id)
AA161199   RTN3.f 1042 to 1397 1 to 357   fully sequenced,   357/357
(100 %)
0 diff
(100 %id)
TI_149310404   RTN3.f 1045 to 1814 847 to 85   AAA   763/898
(84 %)
41 diff
(95.5 %id)
BI036563 nervous_tumor RTN3.f 1047 to 1234 11 to 197       187/197
(94 %)
7 diff
(96.5 %id)
CA425956 cell lines, Chondrosarcoma RTN3.f 1050 to 1777 746 to 19   AAA   728/744
(97 %)
2 diff
(99.8 %id)
CB053570 leiomyosarcoma, soft tissue RTN3.f 1054 to 1773 745 to 26   AAA   720/720
(100 %)
0 diff
(100 %id)
AV718158 hypothalamus RTN3.f 1062 to 1752 1 to 691       691/702
(98 %)
3 diff
(99.6 %id)
CD742864 Alveolar Macrophage, lung RTN3.f 1065 to 1752 705 to 17   AAA   689/697
(98 %)
0 diff
(100 %id)
CA312489 Human Lung Epithelial cells, lung RTN3.f 1067 to 1799 749 to 17   AAA   733/733
(100 %)
0 diff
(100 %id)
CA442974 Fibrosarcoma RTN3.f 1068 to 1773 724 to 19   AAA   706/706
(100 %)
0 diff
(100 %id)
CB136236 Liver RTN3.f 1080 to 1700 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BU615675 cell lines, Chondrosarcoma RTN3.f 1084 to 1775 710 to 19   AAA   692/692
(100 %)
0 diff
(100 %id)
DR762343 embryonic stem RTN3.f 1097 to 1892 1 to 796       796/796
(100 %)
0 diff
(100 %id)
BP303054   RTN3.f 1105 to 1674 1 to 570       570/570
(100 %)
0 diff
(100 %id)
TI_149305271   RTN3.f 1113 to 1775 775 to 113   AAA   663/921
(71 %)
0 diff
(100 %id)
BU685644 lung, Primary Lung Epithelial Cells RTN3.f 1113 to 1775 681 to 19   AAA   663/676
(98 %)
0 diff
(100 %id)
BM969152 lung, Primary Lung Cystic Fibrosis EpithelialCells RTN3.f 1115 to 1820 724 to 19   AAA   706/706
(100 %)
0 diff
(100 %id)
BM976897 lung, Primary Lung Cystic Fibrosis EpithelialCells RTN3.f 1128 to 1775 666 to 19   AAA   648/648
(100 %)
0 diff
(100 %id)
CD621720   RTN3.f 1139 to 1648 510 to 1       510/510
(100 %)
0 diff
(100 %id)
TI_149287368   RTN3.f 1184 to 1775 657 to 68   AAA   590/1112
(53 %)
3 diff
(99.8 %id)
AI755053 bone marrow stroma RTN3.f 1192 to 1778 614 to 28   AAA   587/587
(100 %)
0 diff
(100 %id)
DB487305 hypothalamus RTN3.f 1203 to 1638 436 to 1     Submitted on the opposite strand 436/436
(100 %)
1 diff
(99.8 %id)
TI_45214513   RTN3.f 1209 to 1879 98 to 768       671/768
(87 %)
6 diff
(99.3 %id)
TI_43961377   RTN3.f 1214 to 1704 497 to 2       496/638
(77 %)
0 diff
(100 %id)
BM696264 eye, lens RTN3.f 1216 to 1797 1 to 582     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 582/582
(100 %)
0 diff
(100 %id)
BM746866 Ascites, stomach RTN3.f 1262 to 1774 1 to 513       513/521
(98 %)
1 diff
(99.9 %id)
AI911850 adenocarcinoma, Pancreas RTN3.f 1272 to 1757 486 to 1       486/486
(100 %)
0 diff
(100 %id)
BM014809 breast, mammary adenocarcinoma, cell line RTN3.f 1272 to 1984 1 to 713       713/713
(100 %)
0 diff
(100 %id)
TI_59392871   RTN3.f 1272 to 1984 95 to 807       713/713
(100 %)
0 diff
(100 %id)
AL558512   RTN3.f 1298 to 2215 1 to 917       917/922
(99 %)
3 diff
(99.7 %id)
CR596154 T cells (Jurkat cell line) Cot10-normalized RTN3.f 1298 to 2560 1 to 1263       1263/1263
(100 %)
0 diff
(100 %id)
DB571391 hypothalamus RTN3.f 1299 to 1773 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
AI276668 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus RTN3.f 1300 to 1752 453 to 1       453/453
(100 %)
0 diff
(100 %id)
DB575350 hypothalamus RTN3.f 1302 to 1773 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
AI354787 lung RTN3.f 1315 to 1766 452 to 1       452/452
(100 %)
0 diff
(100 %id)
EB386591 eye, optic nerve RTN3.f 1316 to 2120 1 to 804       804/804
(100 %)
2 diff
(99.8 %id)
DB534482 hippocampus RTN3.f 1353 to 1775 1 to 423     Submitted on the opposite strand 423/423
(100 %)
1 diff
(99.8 %id)
GD158735   RTN3.f 1358 to 1557 204 to 5     Submitted on the opposite strand 200/207
(96 %)
0 diff
(100 %id)
AA161200   RTN3.f 1367 to 1778 411 to 1   fully sequenced,   411/411
(100 %)
3 diff
(99.3 %id)
TI_154179476   RTN3.f 1393 to 2193 77 to 875       799/803
(99 %)
11 diff
(98.7 %id)
BU579930 insulinoma, Pancreas RTN3.f 1399 to 1921 8 to 530     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 523/530
(98 %)
6 diff
(98.9 %id)
TI_154173007   RTN3.f 1405 to 2029 87 to 722       636/1098
(57 %)
27 diff
(97.6 %id)
TI_154178352   RTN3.f 1405 to 1978 88 to 650   AAA   563/574
(98 %)
31 diff
(94.6 %id)
TI_154178460   RTN3.f 1405 to 1951 80 to 625       546/556
(98 %)
7 diff
(98.8 %id)
TI_154172401   RTN3.f 1418 to 2000 80 to 662       583/583
(100 %)
2 diff
(99.7 %id)
AW297719   RTN3.f 1422 to 1705 1 to 283   AAA Submitted on the opposite strand 283/284
(99 %)
13 diff
(95.5 %id)
TI_44170037   RTN3.f 1440 to 2226 121 to 907       787/907
(86 %)
6 diff
(99.4 %id)
BU184277 eye, retinoblastoma RTN3.f 1442 to 2238 1 to 806       806/910
(88 %)
10 diff
(99.0 %id)
R20740 whole brain RTN3.f 1495 to 1777 301 to 12   AAA   290/402
(72 %)
0 diff
(100 %id)
FN146752 breast carcinoma RTN3.f 1580 to 1691 117 to 1     Submitted on the opposite strand 117/126
(92 %)
6 diff
(95.3 %id)
AL534319 brain, fetal brain RTN3.f 1590 to 2561 34 to 998   fully sequenced, AAA   965/998
(96 %)
6 diff
(99.4 %id)
TI_154110745   RTN3.f 1678 to 2591 986 to 84   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 903/976
(92 %)
18 diff
(98.2 %id)
TI_149313781   RTN3.f 1689 to 2595 976 to 87   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 890/960
(92 %)
26 diff
(97.3 %id)
AI080347 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus RTN3.f 1694 to 1778 84 to 1       84/84
(100 %)
1 diff
(98.9 %id)
TI_154109210   RTN3.f 1725 to 2591 954 to 101   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 854/978
(87 %)
15 diff
(98.5 %id)
TI_149275526   RTN3.f 1737 to 2597 928 to 82       847/1082
(78 %)
0 diff
(100 %id)
TI_149310963   RTN3.f 1737 to 2591 922 to 83   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 840/905
(92 %)
25 diff
(97.3 %id)
CV311699 nervous_normal RTN3.f 1785 to 2191 40 to 458       419/458
(91 %)
6 diff
(98.7 %id)
BM685892 eye, Retina Foveal and Macular RTN3.f 1823 to 2253 3 to 431   fully sequenced,   429/431
(99 %)
5 diff
(98.9 %id)
BU615898 Bone, Subchondral Bone RTN3.f 1843 to 2589 745 to 1       745/745
(100 %)
2 diff
(99.8 %id)
TI_149306463   RTN3.f 1850 to 2591 830 to 88   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 743/958
(77 %)
15 diff
(98.5 %id)
TI_151696947   RTN3.f 1855 to 2597 825 to 85       741/1084
(68 %)
0 diff
(100 %id)
TI_154124001   RTN3.f 1862 to 2568 843 to 143   AAA   701/905
(77 %)
0 diff
(100 %id)
TI_154123793   RTN3.f 1901 to 2591 775 to 92   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 684/914
(74 %)
10 diff
(99.0 %id)
TI_154134389   RTN3.f 1910 to 2602 795 to 82       714/839
(85 %)
60 diff
(92.9 %id)
CK824810 Pancreas, Purified pancreatic islet RTN3.f 1918 to 2531 1 to 614     Submitted on the opposite strand 614/614
(100 %)
0 diff
(100 %id)
TI_149311687   RTN3.f 1934 to 2591 737 to 82   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 656/1011
(64 %)
3 diff
(99.8 %id)
BM998501 lung, Metastatic Chondrosarcoma RTN3.f 1935 to 2589 653 to 1       653/653
(100 %)
2 diff
(99.7 %id)
TI_149287038   RTN3.f 1949 to 2574 705 to 79   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 627/1084
(57 %)
4 diff
(99.7 %id)
TI_151701344   RTN3.f 1949 to 2425 573 to 96       478/1307
(36 %)
0 diff
(100 %id)
TI_153953006   RTN3.f 1954 to 2494 76 to 615       540/540
(100 %)
1 diff
(99.9 %id)
BQ614407 insulinoma, Pancreas RTN3.f 1969 to 2574 621 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 606/606
(100 %)
0 diff
(100 %id)
BU579690 insulinoma, Pancreas RTN3.f 1984 to 2574 622 to 33   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 590/590
(100 %)
1 diff
(99.9 %id)
TI_45236258   RTN3.f 2006 to 2572 98 to 663   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 566/666
(84 %)
11 diff
(98.4 %id)
TI_57145894   RTN3.f 2006 to 2544 33 to 575       543/767
(70 %)
19 diff
(97.6 %id)
CK824811 Pancreas, Purified pancreatic islet RTN3.f 2031 to 2597 580 to 14     Submitted on the opposite strand 567/580
(97 %)
0 diff
(100 %id)
BJ989927 hepatoblastoma RTN3.f 2033 to 2571 540 to 1       540/540
(100 %)
1 diff
(99.9 %id)
BC000865 Cervix, carcinoma RTN3.f 2051 to 2574 1 to 524   available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 524/524
(100 %)
0 diff
(100 %id)
DB369271   RTN3.f 2075 to 2574 497 to 1       497/497
(100 %)
4 diff
(99.2 %id)
BU735321 eye, lens RTN3.f 2089 to 2574 501 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 486/486
(100 %)
0 diff
(100 %id)
TI_151703389   RTN3.f 2103 to 2597 589 to 97       493/1386
(35 %)
0 diff
(100 %id)
DB329566 Prostate RTN3.f 2107 to 2595 489 to 1       489/489
(100 %)
0 diff
(100 %id)
DB542278 hippocampus RTN3.f 2109 to 2574 1 to 466   AAA Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
DB552191 hippocampus RTN3.f 2115 to 2574 1 to 460   AAA Submitted on the opposite strand 460/460
(100 %)
0 diff
(100 %id)
DB575010 hypothalamus RTN3.f 2116 to 2574 1 to 459   AAA Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
DB573142 hypothalamus RTN3.f 2118 to 2595 1 to 478     Submitted on the opposite strand 478/478
(100 %)
0 diff
(100 %id)
DB367756   RTN3.f 2130 to 2574 443 to 1       443/443
(100 %)
1 diff
(99.8 %id)
TI_154184853   RTN3.f 2131 to 2597 101 to 568   AAA   468/548
(85 %)
10 diff
(98.2 %id)
BU726253 eye, Retina Foveal and Macular RTN3.f 2223 to 2591 367 to 1   fully sequenced,   367/367
(100 %)
1 diff
(99.8 %id)
GD144834   RTN3.f 2254 to 2574 8 to 326   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 319/326
(97 %)
6 diff
(98.2 %id)
EC515679 Prostate RTN3.f 2361 to 2482 1 to 117       117/117
(100 %)
6 diff
(94.9 %id)
DB531445 hippocampus RTN3.f 2388 to 2589 8 to 207     Submitted on the opposite strand 200/207
(96 %)
9 diff
(95.7 %id)
BY999693   RTN3.f 2406 to 2577 1 to 170     Submitted on the opposite strand 170/170
(100 %)
1 diff
(99.5 %id)
EC544875 Prostate RTN3.f 2440 to 2507 1 to 68       68/68
(100 %)
2 diff
(97.1 %id)
AL565469 brain, fetal brain RTN3.f 2486 to 2576 87 to 1   fully sequenced,   87/87
(100 %)
0 diff
(100 %id)
DA403519 thalamus RTN3.g -8 to 535 2 to 546   tiling clone, capped   545/545
(100 %)
2 diff
(99.7 %id)
DA222344 brain RTN3.g 258 to 819 2 to 563   tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
BP353915   RTN3.h 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
AK297529 brain RTN3.h 74 to 1480 1 to 1407 exact tiling clone,   1407/1407
(100 %)
1 diff
(100.0 %id)
DC352746 brain RTN3.h 74 to 618 1 to 548       548/548
(100 %)
6 diff
(99.0 %id)
DB467675 hippocampus RTN3.i 1 to 735 1 to 735 A6E P141Q L172X K173E tiling clone,   735/735
(100 %)
5 diff
(99.4 %id)
BG681187 skin, squamous cell carcinoma RTN3.j 1 to 913 1 to 905 I126M K155R A156Q E157N tiling clone,   905/906
(99 %)
18 diff
(98.1 %id)
DA309996 hippocampus RTN3.k 1 to 579 7 to 585 exact tiling clone, capped   584/584
(100 %)
1 diff
(99.9 %id)
DA526841 brain RTN3.l 1 to 576 2 to 577 exact tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
DA212447 brain RTN3.m -8 to 519 2 to 529 A6E A36V tiling clone, capped   528/528
(100 %)
3 diff
(99.5 %id)
AK297533 brain RTN3.n 1 to 992 1 to 992 exact tiling clone,   992/992
(100 %)
0 diff
(100 %id)
DA518312 brain RTN3.n 2 to 553 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DB474779 hippocampus RTN3.o 1 to 513 1 to 513 A6E tiling clone,   513/514
(99 %)
3 diff
(99.5 %id)
DA517147 brain RTN3.p 1 to 545 2 to 546 exact tiling clone, capped   545/545
(100 %)
0 diff
(100 %id)
DA959992 Spleen RTN3.p 1 to 559 2 to 561 E3G P4A S5V A6G A7G ... capped   560/560
(100 %)
3 diff
(99.5 %id)
DA249609 brain RTN3.p 44 to 628 2 to 586 A6E capped   585/585
(100 %)
1 diff
(99.9 %id)
BP319278 pericardium RTN3.p 131 to 711 1 to 581 exact tiling clone,   581/582
(99 %)
1 diff
(99.9 %id)
AW896805 nervous_normal RTN3.p 460 to 697 241 to 9       233/250
(93 %)
0 diff
(100 %id)
CR737900 anaplastic oligodendroglioma, brain RTN3.q 1 to 493 1 to 493 exact tiling clone,   493/493
(100 %)
0 diff
(100 %id)
DB169367 kidney, tumor tissue RTN3.r 1 to 598 2 to 599 exact tiling clone, capped   598/600
(99 %)
2 diff
(99.7 %id)
TI_44348816   RTN3.s 1 to 607 89 to 699 A6E G26R G27R G28L G29A ... tiling clone,   611/699
(87 %)
19 diff
(97.3 %id)
TI_44348896   RTN3.s 1 to 654 90 to 755 A6E F80Y tiling clone, AAA   666/845
(78 %)
28 diff
(96.7 %id)
BM719009 eye, fetal eye RTN3.t 1 to 638 1 to 638 exact tiling clone, fully sequenced,   638/638
(100 %)
0 diff
(100 %id)
BM682993 eye, fetal eye RTN3.t 608 to 1145 556 to 19   tiling clone, fully sequenced, AAA   538/538
(100 %)
0 diff
(100 %id)
AA626391 lung, lung carcinoma RTN3.u-u 1 to 436 1 to 436   tiling clone,   436/436
(100 %)
0 diff
(100 %id)
DA260078 caudate nucleus RTN3.u-u 219 to 767 2 to 550   tiling clone, capped   549/554
(99 %)
2 diff
(99.7 %id)
CN414739 embryonic stem cells, DMSO-treated H9 cellline RTN3.u-u 368 to 977 1 to 610 exact tiling clone,   610/610
(100 %)
1 diff
(99.9 %id)
CB267243 adipose RTN3.va-u 1 to 467 1 to 467 R15G tiling clone,   467/467
(100 %)
1 diff
(99.8 %id)
DB556648 hypothalamus RTN3.vc-u 1 to 421 422 to 1 M15I S40* tiling clone,   422/422
(100 %)
3 diff
(99.3 %id)
AK295534 hippocampus Gene RTN3, variant not shown         This clone was ignored    
DC313681 amygdala Gene RTN3, variant not shown         This clone was ignored    
DC331206 hippocampus Gene RTN3, variant not shown         This clone was ignored    
AV661171 corresponding non cancerous liver tissue Gene RTN3, variant not shown       AAA Submitted on the opposite strand, submitted on the opposite strand    
BJ992877 hepatoblastoma Gene RTN3, variant not shown         Suspected internal deletion, this clone was ignored    
AW337856 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood Gene RTN3, variant not shown              
DC366682   Gene RTN3, variant not shown         Suspected internal deletion, this clone was ignored    
DC396013 testis Gene RTN3, variant not shown         Suspected internal deletion, this clone was ignored    
TI_154100995   Gene RTN3, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u-u, .va-u, .vb-u, .vc-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI