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Gene RSBN1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
286 supporting clones for gene RSBN1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG721878 testis .a 1 to 685 6 to 688   tiling clone,   683/688
(99 %)
0 diff
(100 %id)
AK292552 testis .a 86 to 2619 1 to 2534 E106G tiling clone,   2534/2534
(100 %)
1 diff
(100.0 %id)
DB089290 testis .a 87 to 646 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BQ062524 lymph, lymphoma, cell line .a 110 to 852 1 to 745       745/1099
(67 %)
14 diff
(98.8 %id)
NM_018364.3   .a 114 to 6705 1 to 6592 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 6592/6592
(100 %)
2 diff
(100.0 %id)
DB220208 trachea .a 263 to 820 2 to 559   capped   558/558
(100 %)
5 diff
(99.2 %id)
BG721903 testis .a 264 to 984 1 to 709       709/709
(100 %)
39 diff
(94.5 %id)
DA457371 tongue, tumor tissue .a 266 to 806 2 to 542   capped   541/541
(100 %)
4 diff
(99.3 %id)
DA724620   .a 267 to 823 2 to 558   capped   557/557
(100 %)
3 diff
(99.5 %id)
CB127733 cervix, Uterine .a 268 to 571 1 to 305       305/305
(100 %)
7 diff
(97.8 %id)
BP243528 Liver .a 268 to 845 1 to 578       578/578
(100 %)
6 diff
(99.0 %id)
DA784333 brain .a 268 to 849 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA817478   .a 268 to 837 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA480501   .a 269 to 784 2 to 517   capped   516/516
(100 %)
2 diff
(99.7 %id)
DA499364 brain .a 269 to 851 2 to 584   capped   583/583
(100 %)
1 diff
(99.9 %id)
DA502070 brain .a 269 to 836 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA513767 brain .a 269 to 826 2 to 561   capped   560/560
(100 %)
3 diff
(99.5 %id)
DA605477   .a 269 to 821 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA666044   .a 269 to 821 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA767862 brain .a 269 to 1008 2 to 747   capped   746/749
(99 %)
8 diff
(99.0 %id)
DA781363 brain .a 269 to 829 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA793710 brain .a 269 to 820 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB092754 testis .a 269 to 825 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB099863 testis .a 269 to 834 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB142868 thymus .a 269 to 745 2 to 478   capped   477/477
(100 %)
1 diff
(99.8 %id)
DB155465 thymus .a 269 to 833 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB163422 thymus .a 269 to 831 2 to 565   capped   564/564
(100 %)
4 diff
(99.3 %id)
DB270776 uterus .a 269 to 808 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
DB270922 uterus .a 269 to 799 2 to 532   capped   531/531
(100 %)
1 diff
(99.9 %id)
DB290002 uterus .a 269 to 852 2 to 585   capped   584/587
(99 %)
2 diff
(99.7 %id)
DA100909 cerebellum .a 270 to 849 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA101615 cerebellum .a 270 to 808 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA232828 brain .a 270 to 827 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA266515 caudate nucleus .a 270 to 819 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA450832 tongue, tumor tissue .a 270 to 833 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA493765 brain .a 270 to 765 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
DA494704 brain .a 270 to 843 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA499324 brain .a 270 to 830 2 to 562   capped   561/562
(99 %)
2 diff
(99.7 %id)
DA510510 brain .a 270 to 849 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA605069   .a 270 to 831 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA689628   .a 270 to 801 2 to 533   capped   532/532
(100 %)
1 diff
(99.9 %id)
DA741141   .a 270 to 771 2 to 503   capped   502/502
(100 %)
0 diff
(100 %id)
DA782775 brain .a 270 to 849 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA937508 Spleen .a 270 to 852 2 to 584   capped   583/586
(99 %)
4 diff
(99.4 %id)
DB043346 testis .a 270 to 840 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DB232186 trachea .a 270 to 852 2 to 584   capped   583/591
(98 %)
2 diff
(99.7 %id)
DB267112 uterus .a 270 to 501 2 to 233   capped   232/232
(100 %)
0 diff
(100 %id)
AK002082 placenta .a 271 to 2690 1 to 2420   available from FLJ,   2420/2420
(100 %)
5 diff
(99.8 %id)
DA101399 cerebellum .a 271 to 845 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA128324 cerebellum .a 271 to 836 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA236897 brain .a 272 to 765 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA740683   .a 272 to 765 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA761979 tongue .a 272 to 742 2 to 472   capped   471/471
(100 %)
2 diff
(99.6 %id)
AU138233 placenta .a 272 to 941 2 to 670   capped   669/669
(100 %)
5 diff
(99.3 %id)
DA028826   .a 273 to 849 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA505339 brain .a 273 to 809 25 to 561   capped   537/560
(95 %)
0 diff
(100 %id)
DB047316 testis .a 273 to 833 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB087713 testis .a 273 to 836 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DB213048 trachea .a 274 to 832 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
DA877829 Prostate .a 278 to 854 2 to 578   capped   577/581
(99 %)
2 diff
(99.7 %id)
DB087892 testis .a 278 to 819 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BI561675 testis .a 280 to 1200 1 to 934       932/942
(98 %)
49 diff
(94.8 %id)
DA772917 brain .a 280 to 859 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA095320 cerebellum .a 281 to 806 2 to 527   capped   526/526
(100 %)
1 diff
(99.9 %id)
DN993626 brain, whole brain .a 281 to 933 1 to 652       652/748
(87 %)
9 diff
(98.8 %id)
DA409645 thalamus .a 282 to 826 2 to 548   capped   547/547
(100 %)
3 diff
(99.5 %id)
TI_44350640   .a 285 to 1200 120 to 1048       927/1056
(87 %)
37 diff
(96.5 %id)
DA265655 caudate nucleus .a 286 to 821 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
BM824707 Ascites, stomach .a 286 to 528 1 to 243       243/243
(100 %)
1 diff
(99.6 %id)
CB998127 placenta, pre-eclamptic placenta .a 287 to 922 27 to 662       636/666
(95 %)
1 diff
(99.9 %id)
TI_154097869   .a 287 to 942 714 to 61       654/899
(72 %)
3 diff
(99.7 %id)
CA440788 lung, Metastatic Chondrosarcoma .a 287 to 911 635 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 624/644
(96 %)
5 diff
(99.3 %id)
BM709973 eye, optic nerve .a 289 to 798 1 to 510       510/510
(100 %)
3 diff
(99.5 %id)
TI_1948126715   .a 290 to 794 117 to 621       505/1173
(43 %)
24 diff
(98.0 %id)
TI_1948126720   .a 290 to 1008 126 to 844       719/1379
(52 %)
46 diff
(96.7 %id)
TI_1948127031   .a 290 to 832 125 to 668       544/1135
(47 %)
19 diff
(98.4 %id)
TI_1948127032   .a 290 to 804 126 to 647       522/1323
(39 %)
35 diff
(97.4 %id)
TI_1948127352   .a 290 to 787 126 to 626       501/1126
(44 %)
34 diff
(97.0 %id)
TI_1948127353   .a 290 to 852 130 to 696       567/1347
(42 %)
21 diff
(98.5 %id)
TI_1948127658   .a 290 to 783 122 to 618       497/1187
(41 %)
17 diff
(98.6 %id)
DA785191 brain .a 292 to 880 2 to 593   capped   592/592
(100 %)
3 diff
(99.5 %id)
CV024272 mixed .a 294 to 973 1 to 672       672/679
(98 %)
18 diff
(97.4 %id)
BG773274 testis .a 314 to 980 1 to 667   tiling clone,   667/667
(100 %)
4 diff
(99.5 %id)
BE888593 leiomyosarcoma, uterus .a 405 to 912 1 to 508       508/508
(100 %)
0 diff
(100 %id)
AA778874 liver and spleen .a 406 to 905 496 to 1       496/496
(100 %)
12 diff
(97.6 %id)
BF591098 colon, colon tumor, RER+ .a 443 to 908 466 to 1       466/466
(100 %)
1 diff
(99.8 %id)
AI075979   .a 457 to 913 457 to 1       457/457
(100 %)
0 diff
(100 %id)
AI768513 Kidney .a 457 to 910 454 to 1       454/454
(100 %)
1 diff
(99.8 %id)
AW183679 pooled .a 517 to 913 398 to 1       398/398
(100 %)
2 diff
(99.5 %id)
AW134518   .a 517 to 922 406 to 2   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 405/406
(99 %)
0 diff
(100 %id)
BE221798 Kidney .a 518 to 885 368 to 1       368/368
(100 %)
2 diff
(99.5 %id)
TI_1948126721   .a 596 to 1526 1065 to 124       942/1284
(73 %)
40 diff
(96.9 %id)
BE673207 Prostate .a 601 to 914 314 to 1       314/314
(100 %)
0 diff
(100 %id)
AA707635   .a 620 to 920 301 to 1       301/301
(100 %)
7 diff
(97.7 %id)
AI023250   .a 622 to 920 299 to 1       299/299
(100 %)
2 diff
(99.4 %id)
TI_1948127659   .a 629 to 1526 1015 to 124       892/1275
(69 %)
36 diff
(97.2 %id)
AI261745 Kidney .a 669 to 910 242 to 1       242/242
(100 %)
0 diff
(100 %id)
TI_1948126722   .a 774 to 1526 872 to 124       749/1073
(69 %)
18 diff
(98.4 %id)
TI_1948127660   .a 847 to 1526 809 to 128       682/1086
(62 %)
0 diff
(100 %id)
TI_1948126718   .a 851 to 1526 793 to 124       670/1070
(62 %)
0 diff
(100 %id)
TI_1948127033   .a 851 to 1526 741 to 67       675/1277
(52 %)
0 diff
(100 %id)
TI_1948127034   .a 851 to 1526 804 to 128       677/1103
(61 %)
0 diff
(100 %id)
TI_1948126717   .a 853 to 1526 735 to 66       670/1249
(53 %)
0 diff
(100 %id)
TI_1948127355   .a 853 to 1526 798 to 124       675/1099
(61 %)
0 diff
(100 %id)
TI_1948127656   .a 858 to 1529 749 to 64       686/1258
(54 %)
0 diff
(100 %id)
AA226792 brain, neuroepithelial cells .a 863 to 1217 1 to 355       355/355
(100 %)
0 diff
(100 %id)
TI_1948127354   .a 894 to 1526 700 to 65       636/1233
(51 %)
0 diff
(100 %id)
TI_1948127657   .a 896 to 1526 753 to 125       629/1095
(57 %)
0 diff
(100 %id)
AK022166 whole embryo, mainly body .a 907 to 3907 1 to 2996   tiling clone, available from FLJ,   2996/2996
(100 %)
2 diff
(100.0 %id)
AU121374 whole embryo, mainly body .a 908 to 1668 2 to 762   capped   761/810
(93 %)
9 diff
(98.9 %id)
AA334299   .a 1059 to 1298 1 to 241       241/245
(98 %)
3 diff
(98.8 %id)
DA579210   .a 1114 to 1661 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
BP203419 coronary artery .a 1187 to 1773 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
BJ996919 hepatoblastoma .a 1195 to 1739 1 to 545       545/545
(100 %)
0 diff
(100 %id)
BP221033 colon .a 1345 to 1920 1 to 576       576/576
(100 %)
16 diff
(97.3 %id)
CN427008 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1370 to 1813 1 to 444       444/448
(99 %)
5 diff
(98.9 %id)
H24104 whole brain .a 1495 to 1919 1 to 433       433/436
(99 %)
9 diff
(98.0 %id)
DA930144 small intestine .a 1510 to 2072 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BP205061 coronary artery .a 1634 to 2216 1 to 584       584/584
(100 %)
30 diff
(94.9 %id)
DB463104 hippocampus .a 1636 to 2068 1 to 434       434/434
(100 %)
2 diff
(99.6 %id)
DN919841   .a 1676 to 2199 1 to 523       523/523
(100 %)
7 diff
(98.7 %id)
AA382924 testis .a 1784 to 2067 1 to 284       284/284
(100 %)
0 diff
(100 %id)
AW958645   .a 1785 to 2288 1 to 506       506/508
(99 %)
16 diff
(96.9 %id)
AV749680 Pituitary .a 1802 to 2284 1 to 469       468/472
(99 %)
24 diff
(95.0 %id)
BE017953 cervical carcinoma cell line, cervix .a 1810 to 2292 1 to 483       483/483
(100 %)
1 diff
(99.8 %id)
CD639340 pooled .a 1815 to 2569 1 to 749       749/751
(99 %)
16 diff
(97.9 %id)
AU139675 placenta .a 1822 to 2518 2 to 704   capped   703/708
(99 %)
9 diff
(98.8 %id)
R19861 whole brain .a 1877 to 2139 1 to 264       264/264
(100 %)
1 diff
(99.7 %id)
BE927212 colon .a 1888 to 2442 564 to 9       556/564
(98 %)
0 diff
(100 %id)
FN158426 breast carcinoma .a 1936 to 2014 1 to 78       78/79
(98 %)
2 diff
(97.5 %id)
BP267478 thyroid .a 2013 to 2589 1 to 577       577/577
(100 %)
0 diff
(100 %id)
CA432709 cell lines, Chondrosarcoma .a 2031 to 2690 676 to 17   AAA   660/660
(100 %)
0 diff
(100 %id)
BX480686   .a 2043 to 2614 1 to 570       570/570
(100 %)
4 diff
(99.3 %id)
BQ694562 adipose .a 2067 to 2773 1 to 707       707/707
(100 %)
3 diff
(99.6 %id)
DA624855 Kidney .a 2072 to 2621 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA062774 cerebellum .a 2112 to 2677 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AU157529 placenta .a 2125 to 2690 563 to 1       563/566
(99 %)
16 diff
(97.2 %id)
BF993819 placenta_normal .a 2133 to 2375 1 to 244       244/244
(100 %)
7 diff
(97.2 %id)
AA082702   .a 2271 to 2828 1 to 551       551/551
(100 %)
21 diff
(96.2 %id)
AU133932 ovary, tumor tissue .a 2309 to 2962 2 to 658   capped   657/660
(99 %)
11 diff
(98.4 %id)
BP256023 Kidney .a 2433 to 3015 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
FN060691 breast carcinoma .a 2456 to 2553 98 to 1     Submitted on the opposite strand 98/98
(100 %)
0 diff
(100 %id)
DA124620 cerebellum .a 2477 to 2956 2 to 482   capped   481/481
(100 %)
1 diff
(99.8 %id)
BQ924409 leiomyosarcoma, uterus .a 2483 to 3057 1 to 582       582/1044
(55 %)
17 diff
(98.4 %id)
N46704 multiple sclerosis lesions .a 2521 to 2733 1 to 213       213/214
(99 %)
3 diff
(98.6 %id)
BF027786 bladder, carcinoma, cell line .a 2531 to 3158 1 to 621       621/885
(70 %)
20 diff
(97.8 %id)
AA136953 uterus .a 2647 to 3026 1 to 393   fully sequenced,   393/393
(100 %)
9 diff
(97.8 %id)
R77983 placenta .a 2650 to 2937 9 to 313   fully sequenced,   305/313
(97 %)
7 diff
(97.8 %id)
BX098483 placenta .a 2654 to 3213 32 to 591   AAA   560/591
(94 %)
0 diff
(100 %id)
R39666 placenta .a 2661 to 2959 8 to 313   fully sequenced,   306/313
(97 %)
11 diff
(96.5 %id)
BU753151 placenta .a 2668 to 3216 550 to 2       549/550
(99 %)
0 diff
(100 %id)
AW796460 uterus .a 2669 to 2889 229 to 1       229/249
(91 %)
0 diff
(100 %id)
BQ024213 placenta .a 2673 to 3216 546 to 3       544/546
(99 %)
0 diff
(100 %id)
BE044188 pooled .a 2712 to 3199 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AA875990 germinal center B cell .a 2713 to 3213 512 to 13   AAA   500/500
(100 %)
2 diff
(99.6 %id)
AA730821 Ewing's sarcoma .a 2714 to 2971 4 to 265       262/265
(98 %)
0 diff
(100 %id)
AI672311 Kidney .a 2716 to 3214 504 to 6       499/504
(99 %)
0 diff
(100 %id)
BE301435 cervical carcinoma cell line, cervix .a 2728 to 3220 493 to 1       493/493
(100 %)
0 diff
(100 %id)
AI768601 Kidney .a 2730 to 3213 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AA714892 Ewing's sarcoma .a 2765 to 3194 430 to 1       430/430
(100 %)
1 diff
(99.8 %id)
N39258 multiple sclerosis lesions .a 2774 to 3220 447 to 1       447/447
(100 %)
0 diff
(100 %id)
BJ996920 hepatoblastoma .a 2793 to 3186 394 to 1       394/394
(100 %)
0 diff
(100 %id)
AI799877 Prostate .a 2795 to 3135 341 to 1       341/341
(100 %)
3 diff
(99.2 %id)
DB509305 testis .a 2806 to 3220 1 to 416     Submitted on the opposite strand 416/416
(100 %)
1 diff
(99.8 %id)
FN095889 breast carcinoma .a 2810 to 2888 80 to 1     Submitted on the opposite strand 80/80
(100 %)
1 diff
(98.8 %id)
AI625322 adenocarcinoma, Pancreas .a 2815 to 3222 409 to 1       409/409
(100 %)
4 diff
(99.1 %id)
BX502152 Liver .a 2822 to 3222 1 to 402       402/402
(100 %)
11 diff
(97.3 %id)
AW337336 adenocarcinoma, Pancreas .a 2838 to 3201 364 to 1       364/364
(100 %)
0 diff
(100 %id)
BQ025620 placenta .a 2838 to 3216 381 to 3       379/381
(99 %)
0 diff
(100 %id)
BQ025995 placenta .a 2843 to 3216 376 to 3       374/376
(99 %)
0 diff
(100 %id)
AL700373 human skeletal muscle .a 2853 to 3459 1 to 605       605/605
(100 %)
3 diff
(99.6 %id)
BQ025991 placenta .a 2857 to 3216 362 to 3       360/362
(99 %)
0 diff
(100 %id)
H22924 whole brain .a 2885 to 3208 333 to 1       333/400
(83 %)
9 diff
(97.8 %id)
AI243466 pooled .a 2887 to 3222 337 to 2       336/337
(99 %)
0 diff
(100 %id)
BQ023891 placenta .a 2905 to 3216 314 to 3       312/314
(99 %)
0 diff
(100 %id)
R77889 placenta .a 2907 to 3196 304 to 1   fully sequenced,   304/304
(100 %)
5 diff
(98.4 %id)
R39592 placenta .a 2929 to 3213 292 to 1   fully sequenced,   292/292
(100 %)
9 diff
(97.0 %id)
FN098273 breast carcinoma .a 2943 to 3028 1 to 85       85/85
(100 %)
1 diff
(98.9 %id)
AA382923 testis .a 2966 to 3200 235 to 1       235/235
(100 %)
0 diff
(100 %id)
DN919840   .a 2981 to 3568 586 to 1       586/586
(100 %)
6 diff
(99.0 %id)
FN048059 breast carcinoma .a 2996 to 3080 86 to 1     Submitted on the opposite strand 86/89
(96 %)
1 diff
(98.9 %id)
AA136860 uterus .a 2996 to 3214 221 to 1   fully sequenced,   221/221
(100 %)
2 diff
(99.1 %id)
AA227498 brain, neuroepithelial cells .a 3024 to 3220 198 to 1       198/198
(100 %)
1 diff
(99.5 %id)
AW083633 esophagus, squamous cell carcinoma .a 3032 to 3214 183 to 1       183/183
(100 %)
4 diff
(97.9 %id)
FN049919 breast carcinoma .a 3036 to 3152 1 to 117       117/117
(100 %)
1 diff
(99.2 %id)
AI365485 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 3076 to 3213 138 to 1       138/138
(100 %)
0 diff
(100 %id)
DA249540 brain .a 3087 to 3665 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
D11984 Liver .a 3144 to 3220 1 to 77       77/77
(100 %)
0 diff
(100 %id)
BQ309820 breast .a 3148 to 3346 1 to 202       202/202
(100 %)
13 diff
(93.6 %id)
AA947099 pooled .a 3150 to 3214 66 to 1       66/66
(100 %)
1 diff
(98.5 %id)
DA248886 brain .a 3156 to 3743 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DN920893   .a 3180 to 3604 1 to 427       427/427
(100 %)
2 diff
(99.6 %id)
FN095416 breast carcinoma .a 3215 to 3307 1 to 95       95/103
(92 %)
5 diff
(95.2 %id)
AW976434   .a 3277 to 3906 630 to 1     Submitted on the opposite strand 630/635
(99 %)
15 diff
(97.7 %id)
BE781808 eye, retinoblastoma .a 3297 to 3903 1 to 608       608/608
(100 %)
10 diff
(98.4 %id)
AI743803 pooled .a 3304 to 3910 608 to 1       608/608
(100 %)
3 diff
(99.6 %id)
FN051110 breast carcinoma .a 3316 to 3386 1 to 71       71/72
(98 %)
1 diff
(98.7 %id)
EH342694   .a 3345 to 3419 1 to 75       75/75
(100 %)
0 diff
(100 %id)
AU147198 whole embryo, mainly body .a 3350 to 3907 559 to 1       559/559
(100 %)
19 diff
(96.7 %id)
AU155089 ovary, tumor tissue .a 3361 to 3907 543 to 1       543/543
(100 %)
15 diff
(97.3 %id)
DA116484 cerebellum .a 3371 to 3946 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
FN148211 breast carcinoma .a 3378 to 3469 1 to 91       91/92
(98 %)
4 diff
(95.7 %id)
AW467256 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .a 3438 to 3907 470 to 1       470/470
(100 %)
0 diff
(100 %id)
DB519167 testis .a 3439 to 3907 1 to 469     Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
AU158127 placenta .a 3440 to 3907 463 to 1       463/463
(100 %)
7 diff
(98.5 %id)
AA769487 germinal center B cell .a 3483 to 3916 432 to 1       432/432
(100 %)
2 diff
(99.6 %id)
BX497431 Liver .a 3514 to 4075 1 to 556       556/556
(100 %)
9 diff
(98.4 %id)
BM703480 eye, human retina .a 3542 to 3907 1 to 367   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 367/367
(100 %)
1 diff
(99.8 %id)
AA743234 germinal center B cell .a 3578 to 3919 341 to 1       341/341
(100 %)
1 diff
(99.8 %id)
AA995184 Kidney .a 3632 to 3906 275 to 1       275/275
(100 %)
0 diff
(100 %id)
DA463410   .a 3667 to 4221 2 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
AA535306 invasive prostate tumor, Prostate .a 3726 to 3922 9 to 205       197/212
(92 %)
9 diff
(95.8 %id)
AA535407 invasive prostate tumor, Prostate .a 3726 to 3907 8 to 188   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 181/188
(96 %)
0 diff
(100 %id)
AL050064 Kidney .a 3728 to 6705 1 to 2974   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 2974/2974
(100 %)
8 diff
(99.8 %id)
DB528872 hippocampus .a 3736 to 3907 315 to 497     Submitted on the opposite strand 434/497
(87 %)
49 diff
(90.2 %id)
DA283709 corpus callosum .a 3824 to 4416 2 to 593   capped   592/592
(100 %)
2 diff
(99.7 %id)
BM146643 leukopheresis .a 3843 to 4111 1 to 270       270/270
(100 %)
7 diff
(97.5 %id)
BM148161 leukopheresis .a 3843 to 4323 1 to 482       482/482
(100 %)
2 diff
(99.6 %id)
DB154927 thymus .a 3897 to 4432 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
CN399984 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4058 to 4809 4 to 754       751/754
(99 %)
0 diff
(100 %id)
CN399985 embryonic stem cells, DMSO-treated H9 cellline .a 4058 to 4641 9 to 592       584/592
(98 %)
0 diff
(100 %id)
DA424519   .a 4367 to 4933 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
CN399986 embryonic stem cells, DMSO-treated H9 cellline .a 4524 to 5005 1 to 482   tiling clone,   482/482
(100 %)
0 diff
(100 %id)
DA341716 substantia nigra .a 4662 to 5263 2 to 602   capped   601/601
(100 %)
1 diff
(99.9 %id)
AA682921 schizophrenic brain S-11 frontal lobe .a 4729 to 5070 1 to 342     Submitted on the opposite strand 342/342
(100 %)
0 diff
(100 %id)
BM710752 eye, fetal eyes .a 4787 to 5334 1 to 548       548/548
(100 %)
4 diff
(99.3 %id)
BQ422861 melanotic melanoma, skin .a 4818 to 5563 75 to 823       749/823
(91 %)
0 diff
(100 %id)
DN914611   .a 4902 to 5603 1 to 701       701/701
(100 %)
2 diff
(99.8 %id)
DN920008   .a 4902 to 5117 1 to 216       216/216
(100 %)
1 diff
(99.6 %id)
DA130655 alzheimer cortex .a 4916 to 5459 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
BX478083   .a 4925 to 5591 1 to 667       667/667
(100 %)
1 diff
(99.9 %id)
DA572237 whole embryo, mainly body .a 4985 to 5834 2 to 856   tiling clone, capped   855/858
(99 %)
9 diff
(99.0 %id)
H02808 placenta .a 5097 to 5423 1 to 330       330/429
(76 %)
4 diff
(99.1 %id)
EH334591   .a 5107 to 5170 1 to 64       64/64
(100 %)
0 diff
(100 %id)
DA569246 whole embryo, mainly head .a 5128 to 5935 2 to 807   capped   806/812
(99 %)
9 diff
(98.9 %id)
BU177557 melanotic melanoma, skin .a 5266 to 6129 1 to 873       873/893
(97 %)
25 diff
(97.3 %id)
AA504548 germinal center B cell .a 5300 to 5666 1 to 367       367/367
(100 %)
0 diff
(100 %id)
BI915472 brain .a 5344 to 6150 2 to 800       799/800
(99 %)
0 diff
(100 %id)
TI_57239198   .a 5344 to 6150 30 to 828       799/828
(96 %)
0 diff
(100 %id)
BG497537 adenocarcinoma, Prostate .a 5384 to 6191 1 to 801       801/883
(90 %)
27 diff
(97.0 %id)
AV694346 hepatocellular carcinoma .a 5465 to 5842 1 to 374       374/386
(96 %)
3 diff
(99.3 %id)
AV698408 hepatocellular carcinoma .a 5465 to 6013 1 to 544       544/612
(88 %)
12 diff
(98.1 %id)
DA829399 placenta .a 5528 to 6288 2 to 768   fully sequenced, capped   767/767
(100 %)
10 diff
(98.7 %id)
TI_157612980   .a 5638 to 6387 838 to 101   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 738/738
(100 %)
43 diff
(94.2 %id)
BF093367 testis_normal .a 5829 to 6048 225 to 10       216/228
(94 %)
0 diff
(100 %id)
EH321121   .a 5857 to 5936 1 to 80       80/81
(98 %)
1 diff
(98.8 %id)
BF247938 hypernephroma, Kidney .a 5969 to 6550 1 to 589       589/589
(100 %)
17 diff
(97.2 %id)
FN143048 breast carcinoma .a 5984 to 6095 112 to 1     Submitted on the opposite strand 112/112
(100 %)
0 diff
(100 %id)
AI925707 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 6003 to 6387 400 to 16   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 385/385
(100 %)
1 diff
(99.8 %id)
CF527941 placenta .a 6017 to 6387 388 to 18   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 371/371
(100 %)
0 diff
(100 %id)
AI913507 Kidney .a 6082 to 6223 24 to 164     Submitted on the opposite strand 141/164
(85 %)
0 diff
(100 %id)
FN130422 breast carcinoma .a 6087 to 6195 1 to 110       110/110
(100 %)
3 diff
(97.3 %id)
DN914612   .a 6131 to 6701 573 to 2       572/574
(99 %)
0 diff
(100 %id)
DB359229 whole embryo, mainly body .a 6184 to 6705 522 to 1       522/523
(99 %)
8 diff
(98.5 %id)
AW027347 thymus, pooled .a 6195 to 6706 515 to 4   tiling clone,   512/515
(99 %)
0 diff
(100 %id)
TI_151711438   .a 6202 to 6706 642 to 133       510/1156
(44 %)
0 diff
(100 %id)
BE217931 carcinoid, lung .a 6208 to 6701 499 to 6       494/499
(98 %)
0 diff
(100 %id)
CA311024 Human Lung Epithelial cells, lung .a 6209 to 6705 1 to 497   AAA Submitted on the opposite strand 497/497
(100 %)
3 diff
(99.4 %id)
AI566099 Kidney .a 6210 to 6705 497 to 1       497/497
(100 %)
1 diff
(99.8 %id)
BF110125 carcinoid, lung .a 6210 to 6701 501 to 10       492/501
(98 %)
0 diff
(100 %id)
AI921989 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 6212 to 6700 491 to 3       489/491
(99 %)
0 diff
(100 %id)
AW976807   .a 6215 to 6698 490 to 7     Submitted on the opposite strand 484/492
(98 %)
0 diff
(100 %id)
BM146000 leukopheresis .a 6228 to 6703 492 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 476/477
(99 %)
1 diff
(99.8 %id)
DB374205 placenta .a 6258 to 6706 449 to 1   fully sequenced,   449/449
(100 %)
5 diff
(98.9 %id)
D59982   .a 6268 to 6539 1 to 271   fully sequenced,   271/271
(100 %)
4 diff
(98.6 %id)
D61092   .a 6268 to 6625 1 to 357       357/357
(100 %)
1 diff
(99.8 %id)
D61152   .a 6268 to 6581 1 to 314       314/314
(100 %)
2 diff
(99.4 %id)
DB355858 whole embryo, mainly head .a 6274 to 6705 434 to 1       434/434
(100 %)
6 diff
(98.7 %id)
BM145503 leukopheresis .a 6277 to 6703 443 to 17   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 427/427
(100 %)
12 diff
(97.2 %id)
AA769157 germinal center B cell .a 6286 to 6706 428 to 9       420/428
(98 %)
0 diff
(100 %id)
BQ002196 Chondrosarcoma, Left Pelvis .a 6307 to 6705 417 to 19   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 399/399
(100 %)
0 diff
(100 %id)
N66761 cochlea, ear .a 6313 to 6705 408 to 13   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 396/396
(100 %)
3 diff
(99.3 %id)
AA722358   .a 6315 to 6706 394 to 4     Submitted on the opposite strand 391/394
(99 %)
0 diff
(100 %id)
AA651815 germinal center B cell .a 6316 to 6677 361 to 1       361/361
(100 %)
1 diff
(99.8 %id)
AI696509 carcinoid, lung .a 6337 to 6700 364 to 1       364/364
(100 %)
0 diff
(100 %id)
AW515003 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 6337 to 6706 371 to 3       369/371
(99 %)
0 diff
(100 %id)
AI825693 pooled germ cell tumors .a 6372 to 6705 354 to 21   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 334/334
(100 %)
0 diff
(100 %id)
FN123108 breast carcinoma .a 6385 to 6466 1 to 86       86/87
(98 %)
4 diff
(95.5 %id)
AI933564 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 6386 to 6700 322 to 9       314/322
(97 %)
0 diff
(100 %id)
AA860600 parathyroid gland, parathyroid tumor .a 6406 to 6701 302 to 8       295/302
(97 %)
0 diff
(100 %id)
AA831741 germinal center B cell .a 6440 to 6705 292 to 27   AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 266/266
(100 %)
3 diff
(98.9 %id)
AI873970 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 6469 to 6706 236 to 1       236/237
(99 %)
5 diff
(97.9 %id)
H02809 placenta .a 6496 to 6699 226 to 23   AAA   204/211
(96 %)
0 diff
(100 %id)
D59981   .a 6509 to 6700 190 to 1   fully sequenced,   190/190
(100 %)
2 diff
(99.0 %id)
AA653665   .a 6531 to 6706 177 to 1       177/231
(76 %)
1 diff
(99.6 %id)
BC026155 testis .b 1 to 3757 6 to 3762 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/15 A in genome downstream of last aligned base) 3757/3757
(100 %)
1 diff
(100.0 %id)
TI_149283237   .c-u 1 to 706 793 to 89 G17A L18* tiling clone, AAA   705/705
(100 %)
6 diff
(99.2 %id)
BU680121 lung, Primary Lung Epithelial Cells .c-u 55 to 706 670 to 19   tiling clone, AAA   652/652
(100 %)
4 diff
(99.4 %id)
DB448519 testis .d 1 to 419 1 to 419   tiling clone,   419/419
(100 %)
3 diff
(99.3 %id)
DB453711 testis .d 1 to 498 1 to 498 T2I tiling clone,   498/498
(100 %)
1 diff
(99.8 %id)
CN427007 embryonic stem cells, cell lines H1, H7, andH9 .e-u 1 to 613 1 to 614   tiling clone,   614/614
(100 %)
2 diff
(99.7 %id)
BG953337 colon .e-u 572 to 1002 23 to 452   tiling clone,   430/452
(95 %)
0 diff
(100 %id)
AI281396 follicular lymphoma, lymph node .f-u 1 to 524 524 to 1 exact tiling clone,   524/524
(100 %)
1 diff
(99.9 %id)
CR627402 liver tumor Gene RSBN1, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
DA493904 brain Gene RSBN1, variant not shown       capped This clone was ignored    
AV697156 hepatocellular carcinoma Gene RSBN1, variant not shown         Suspected internal deletion, this clone was ignored    
AV654230 corresponding non cancerous liver tissue Gene RSBN1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AV723435 hypothalamus Gene RSBN1, variant not shown         Suspected internal deletion, this clone was ignored    
BI461723 testis Gene RSBN1, variant not shown         Suspected internal deletion, this clone was ignored    
DA794709 brain Gene RSBN1, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA880814   Gene RSBN1, variant not shown       capped Suspected internal deletion, this clone was ignored    
CT004922 T-Lymphocytes Gene RSBN1, variant not shown         Suspected internal deletion, this clone was ignored    
DB240877 trachea Gene RSBN1, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI