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Gene RRP9TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
175 supporting clones for gene RRP9 back to top
cDNA accession
Links to the sequence		 Tissue

most 5' clones
in red		 Match
mRNA		 From bp
to bp
in mRNA		 From bp
to bp
in accs.		 Clone encodes
complete protein
(with AA variation)		 Features Anomalies
detected by
AceView		 Accession
match over
(% length)		 Base differences
relative to genome
(% identity)
AA304826 colon .a 409 to 880 1 to 473       473/473
(100 %)		 1 diff
(99.8 %id)
AA340366 brain .a 671 to 959 10 to 298       289/298
(96 %)		 6 diff
(98.0 %id)
AA378635 synovial membrane .a 532 to 838 1 to 307       307/307
(100 %)		 0 diff
(100 %id)
AJ001340   .a 40 to 1554 1 to 1515 exact     1515/1521
(99 %)		 6 diff
(99.7 %id)
AK313696   .a 1 to 1501 2 to 1502 exact tiling clone,   1502/1502
(100 %)		 0 diff
(100 %id)
AW796754 uterus .a 1373 to 1534 174 to 11       164/174
(94 %)		 2 diff
(98.9 %id)
AW797436 uterus .a 653 to 1045 424 to 33       392/425
(92 %)		 7 diff
(98.4 %id)
AW964163   .a 533 to 1254 1 to 719       719/754
(95 %)		 15 diff
(98.1 %id)
AW966844   .a 669 to 1254 8 to 594       587/604
(97 %)		 21 diff
(96.6 %id)
AW970737   .a 1134 to 1569 444 to 9     Submitted on the opposite strand 436/504
(86 %)		 6 diff
(98.9 %id)
CB155044 brain .a 326 to 968 1 to 643       643/643
(100 %)		 0 diff
(100 %id)
BC001113 Skin, melanotic melanoma. .a 17 to 1576 1 to 1560 exact tiling clone, available from MGC, AAA   1560/1560
(100 %)		 1 diff
(100.0 %id)
BC009879 Skin, melanotic melanoma. .a 35 to 1577 1 to 1543 exact available from MGC, AAA   1543/1543
(100 %)		 1 diff
(100.0 %id)
BC010048 Skin, melanotic melanoma. .a 17 to 1576 1 to 1560   available from MGC, AAA   1560/1560
(100 %)		 1 diff
(100.0 %id)
BC023662 Brain, neuroblastoma .a 69 to 1577 1 to 1509 exact available from MGC, AAA   1509/1509
(100 %)		 0 diff
(100 %id)
BE171420 head_neck .a 1018 to 1485 467 to 1     Submitted on the opposite strand 467/467
(100 %)		 1 diff
(99.8 %id)
BE171422 head_neck .a 1018 to 1506 486 to 2     Submitted on the opposite strand 485/486
(99 %)		 0 diff
(100 %id)
BE707774 head_neck .a 274 to 550 91 to 367       277/370
(74 %)		 10 diff
(97.3 %id)
BF761735 colon_est .a 300 to 659 369 to 13     Submitted on the opposite strand 357/369
(96 %)		 0 diff
(100 %id)
BG900742 cartilage .a 283 to 592 86 to 395       310/327
(94 %)		 6 diff
(98.2 %id)
BG924772 cartilage .a 404 to 1012 78 to 687       610/623
(97 %)		 8 diff
(98.8 %id)
BX096947 whole brain .a 1092 to 1576 499 to 15   AAA   485/485
(100 %)		 0 diff
(100 %id)
BX281518 testis .a 1146 to 1575 458 to 29   AAA Submitted on the opposite strand 430/430
(100 %)		 0 diff
(100 %id)
BX425873 neuroblastoma .a 778 to 1551 774 to 1   fully sequenced,   774/774
(100 %)		 7 diff
(99.1 %id)
BX447203 neuroblastoma .a 77 to 839 1 to 763   fully sequenced,   763/763
(100 %)		 1 diff
(99.9 %id)
CN287105 embryonic stem cells, cell lines H1, H7, andH9 .b 1 to 681 13 to 693   tiling clone,   681/693
(98 %)		 6 diff
(99.2 %id)
CN287106 embryonic stem cells, cell lines H1, H7, andH9 .a 44 to 752 1 to 709       709/709
(100 %)		 3 diff
(99.6 %id)
CN287107 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 507 to 1098 1 to 592       592/592
(100 %)		 2 diff
(99.7 %id)
BY999740   .a 1006 to 1548 1 to 543     Submitted on the opposite strand 543/547
(99 %)		 2 diff
(99.7 %id)
CR598977 Neuroblastoma Cot 25-normalized .a 37 to 1534 1 to 1498 exact     1498/1498
(100 %)		 0 diff
(100 %id)
CR609263 neuroblastoma .a 77 to 1551 1 to 1475       1475/1475
(100 %)		 0 diff
(100 %id)
CR618123 HeLa cells Cot 25-normalized .a 37 to 1548 1 to 1512 exact     1512/1512
(100 %)		 0 diff
(100 %id)
AL525986 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 844 to 1534 691 to 1   fully sequenced,   691/691
(100 %)		 0 diff
(100 %id)
AL526038 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 45 to 874 8 to 837   fully sequenced,   830/837
(99 %)		 10 diff
(98.9 %id)
BX435732 B cells (Ramos cell line) .a 1303 to 1573 272 to 1   fully sequenced,   272/272
(100 %)		 1 diff
(99.7 %id)
BX452287 B cells (Ramos cell line) .a 910 to 1574 1 to 667   fully sequenced,   667/667
(100 %)		 6 diff
(99.2 %id)
AL556707 placenta .a 45 to 839 8 to 801   fully sequenced,   794/801
(99 %)		 7 diff
(99.2 %id)
AL578907 placenta .a 778 to 1548 770 to 1   fully sequenced,   770/770
(100 %)		 2 diff
(99.8 %id)
EC451999 Prostate .a 1081 to 1170 92 to 4       89/92
(96 %)		 0 diff
(100 %id)
EC461220 Prostate .a 1115 to 1207 91 to 1       91/95
(95 %)		 2 diff
(97.9 %id)
EC477031 Prostate .a 1115 to 1207 93 to 1       93/98
(94 %)		 0 diff
(100 %id)
EC477784 Prostate .a 1033 to 1123 91 to 1       91/91
(100 %)		 0 diff
(100 %id)
EC489435 Prostate .a 1506 to 1576 1 to 71       71/73
(97 %)		 1 diff
(98.7 %id)
EC506803 Prostate .a 1033 to 1125 94 to 1       94/94
(100 %)		 0 diff
(100 %id)
EC506981 Prostate .a 1033 to 1107 92 to 17       76/92
(82 %)		 0 diff
(100 %id)
EC518490 Prostate .a 1506 to 1576 1 to 70       70/72
(97 %)		 2 diff
(97.3 %id)
EC520874 Prostate .a 1115 to 1207 93 to 1       93/98
(94 %)		 0 diff
(100 %id)
EC535094 Prostate .a 1115 to 1207 93 to 1       93/97
(95 %)		 0 diff
(100 %id)
EC562280 Prostate .a 1506 to 1576 1 to 71       71/73
(97 %)		 1 diff
(98.7 %id)
EC577810 Prostate .a 1115 to 1207 91 to 1       91/95
(95 %)		 2 diff
(97.9 %id)
ES313682 beard hair, skin .a 1056 to 1554 1 to 499       499/499
(100 %)		 0 diff
(100 %id)
DB457319 testis .a 35 to 502 1 to 468       468/468
(100 %)		 1 diff
(99.8 %id)
DB522778 testis .a 1116 to 1575 1 to 460     Submitted on the opposite strand 460/460
(100 %)		 0 diff
(100 %id)
R19456 whole brain .a 62 to 450 1 to 390       388/391
(99 %)		 20 diff
(94.9 %id)
R44705 whole brain .a 1266 to 1577 330 to 18   AAA   313/313
(100 %)		 3 diff
(99.1 %id)
H67809 liver and spleen .a 722 to 1144 1 to 428       426/428
(99 %)		 12 diff
(97.2 %id)
H68081 liver and spleen .a 1275 to 1574 301 to 1       301/302
(99 %)		 5 diff
(98.4 %id)
AA485435 ovarian tumor, ovary .a 1377 to 1578 206 to 5   fully sequenced,   202/206
(98 %)		 0 diff
(100 %id)
AA485600 ovarian tumor, ovary .a 1291 to 1578 1 to 286   fully sequenced,   288/288
(100 %)		 5 diff
(98.3 %id)
AA465355 germinal center B cell .a 1182 to 1581 407 to 9       399/407
(98 %)		 2 diff
(99.6 %id)
AA465426 germinal center B cell .a 629 to 1039 1 to 409       409/409
(100 %)		 8 diff
(98.1 %id)
AA774174   .a 1217 to 1576 359 to 1       359/359
(100 %)		 3 diff
(99.2 %id)
AA494416 colon .a 1363 to 1578 217 to 2       216/217
(99 %)		 0 diff
(100 %id)
AA527453 colon .a 1167 to 1577 429 to 18   AAA   412/412
(100 %)		 3 diff
(99.3 %id)
AA514791 colon .e-u 535 to 733 200 to 2       199/200
(99 %)		 0 diff
(100 %id)
AA599726   .a 1195 to 1578 386 to 4       383/386
(99 %)		 1 diff
(99.8 %id)
AA766812 germinal center B cell .a 169 to 537 1 to 362     Submitted on the opposite strand 365/362
(100 %)		 15 diff
(95.9 %id)
AA741166 germinal center B cell .a 1305 to 1552 248 to 1       248/248
(100 %)		 3 diff
(98.8 %id)
AA907752 pooled .a 1336 to 1576 248 to 8       241/248
(97 %)		 0 diff
(100 %id)
AI081038 breast .a 1117 to 1575 459 to 1       459/459
(100 %)		 5 diff
(99.0 %id)
AI038895 senescent fibroblast .a 1003 to 1576 580 to 7       574/582
(98 %)		 2 diff
(99.7 %id)
AI085341 anaplastic oligodendroglioma, brain .e-u 301 to 735 450 to 16   tiling clone, AAA   435/435
(100 %)		 0 diff
(100 %id)
AI365651 brain, oligodendroglioma .a 1082 to 1547 466 to 1       466/466
(100 %)		 0 diff
(100 %id)
AI571096 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .g 1 to 144 144 to 1 exact tiling clone,   144/144
(100 %)		 0 diff
(100 %id)
AI687927 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 1233 to 1496 264 to 1       264/265
(99 %)		 20 diff
(92.5 %id)
AI916572 Kidney .a 948 to 1578 643 to 16   AAA   628/629
(99 %)		 7 diff
(98.9 %id)
AI703439 carcinoid, lung .a 434 to 709 276 to 1       276/276
(100 %)		 0 diff
(100 %id)
AI695604 colon .a 1205 to 1577 393 to 18   AAA   376/382
(98 %)		 20 diff
(94.8 %id)
AI718049 aorta .a 911 to 1570 655 to 1       655/655
(100 %)		 11 diff
(98.4 %id)
AW007535 anaplastic oligodendroglioma, brain .a 1110 to 1575 468 to 2       467/468
(99 %)		 1 diff
(99.8 %id)
AW297793   .a 45 to 541 1 to 497     Submitted on the opposite strand 497/497
(100 %)		 1 diff
(99.8 %id)
BE299514 muscle, rhabdomyosarcoma .a 716 to 1526 803 to 1   fully sequenced,   803/803
(100 %)		 19 diff
(97.7 %id)
BE299896 muscle, rhabdomyosarcoma .a 90 to 741 1 to 653   fully sequenced,   651/651
(100 %)		 9 diff
(98.7 %id)
BE019187 muscle, rhabdomyosarcoma .a 142 to 588 1 to 447       447/532
(84 %)		 22 diff
(95.9 %id)
AW779925 Kidney .a 1130 to 1577 448 to 1       448/454
(98 %)		 8 diff
(98.3 %id)
BE276716 melanotic melanoma, skin .a 7 to 712 19 to 727       709/796
(89 %)		 14 diff
(98.3 %id)
AW406648 lymph .a 94 to 363 1 to 270       270/270
(100 %)		 5 diff
(98.2 %id)
BE047241 ovary, serous papillary tumor .a 992 to 1576 588 to 5       584/588
(99 %)		 7 diff
(98.9 %id)
BE328058 carcinoid, lung .a 396 to 742 347 to 1       347/350
(99 %)		 6 diff
(98.3 %id)
CB047494 Kidney .a 1493 to 1576 133 to 50   AAA   84/84
(100 %)		 3 diff
(96.5 %id)
CB047495 Kidney .a 1145 to 1208 10 to 73       64/73
(87 %)		 6 diff
(91.8 %id)
BE255078 eye, retinoblastoma .a 457 to 1056 1 to 602       602/602
(100 %)		 2 diff
(99.7 %id)
BE258125 eye, retinoblastoma .a 458 to 1036 1 to 579       580/819
(70 %)		 11 diff
(98.7 %id)
BE311436 Kidney, renal cell adenocarcinoma .a 79 to 640 1 to 563       563/563
(100 %)		 1 diff
(99.9 %id)
BE314461 brain, neuroblastoma .a 1 to 679 29 to 707       679/709
(95 %)		 9 diff
(98.8 %id)
BF197711 carcinoid, lung .a 1163 to 1496 334 to 1       334/334
(100 %)		 16 diff
(95.3 %id)
BE384146 melanotic melanoma, skin .a 60 to 702 1 to 640       640/644
(99 %)		 7 diff
(99.0 %id)
BE383924 melanotic melanoma, skin .a 58 to 704 1 to 647       647/647
(100 %)		 0 diff
(100 %id)
BE407874 choriocarcinoma, placenta .a 106 to 716 1 to 607       607/637
(95 %)		 10 diff
(98.5 %id)
BE409604 choriocarcinoma, placenta .a 29 to 814 1 to 787       787/959
(82 %)		 18 diff
(98.2 %id)
BC021032 Skin, melanotic melanoma. .a 17 to 1576 1 to 1560 G305R E454K available from MGC, AAA   1560/1560
(100 %)		 3 diff
(99.9 %id)
BE730304 melanotic melanoma, skin .a 10 to 796 27 to 801       778/1022
(76 %)		 41 diff
(96.0 %id)
BE730313 melanotic melanoma, skin .a 89 to 909 27 to 838       812/849
(95 %)		 26 diff
(97.0 %id)
BE782561 eye, retinoblastoma .a 204 to 801 1 to 598       598/907
(65 %)		 17 diff
(98.2 %id)
BE781261 eye, retinoblastoma .c 1 to 732 1 to 729 K58E P59A E60* tiling clone,   729/922
(79 %)		 17 diff
(98.2 %id)
BF026901 melanotic melanoma, skin .a 55 to 809 1 to 747       747/807
(92 %)		 13 diff
(98.4 %id)
BF026906 melanotic melanoma, skin .a 54 to 798 1 to 737       737/737
(100 %)		 13 diff
(98.3 %id)
BF125138 melanotic melanoma, skin .a 54 to 675 1 to 620       620/901
(68 %)		 15 diff
(98.4 %id)
BF213172 bone marrow, from acute myelogenous leukemia .a 1148 to 1575 1 to 428       428/622
(68 %)		 3 diff
(99.6 %id)
BG334409 melanotic melanoma, skin .a 99 to 810 1 to 713       713/862
(82 %)		 11 diff
(98.8 %id)
BG475421 melanotic melanoma, skin .a 34 to 692 1 to 663       663/663
(100 %)		 14 diff
(97.9 %id)
BG472009 eye, retinoblastoma .a 66 to 713 1 to 654       654/792
(82 %)		 24 diff
(97.0 %id)
BI199622 brain, neuroblastoma .a 79 to 414 11 to 344       336/346
(97 %)		 26 diff
(92.5 %id)
BG825193 muscle, rhabdomyosarcoma .a 23 to 575 1 to 552       552/552
(100 %)		 2 diff
(99.7 %id)
BG830663 epithelioid carcinoma cell line, Pancreas .a 47 to 766 1 to 724       724/728
(99 %)		 12 diff
(98.4 %id)
BI255240 cervical carcinoma cell line, cervix .a 50 to 812 1 to 771       771/863
(89 %)		 15 diff
(98.3 %id)
BI761049 pooled colon, kidney, stomach .a 85 to 977 1 to 894       894/894
(100 %)		 12 diff
(98.7 %id)
BI912074 leukocyte .a 548 to 1024 30 to 523       494/731
(67 %)		 32 diff
(95.7 %id)
BI909178 leukocyte .a 60 to 661 1 to 608       608/609
(99 %)		 14 diff
(97.8 %id)
BI562153 testis .a 28 to 809 1 to 782       782/825
(94 %)		 12 diff
(98.6 %id)
BI561814 testis .a 28 to 672 1 to 658       658/788
(83 %)		 85 diff
(89.3 %id)
BM020244 astrocytoma grade IV, cell line, brain .a 505 to 1124 1 to 629       629/629
(100 %)		 10 diff
(98.5 %id)
BM045451 carcinoma, cell line, Prostate .a 46 to 905 1 to 874       791/874
(90 %)		 35 diff
(96.0 %id)
BM011323 brain, neuroblastoma, cell line .a 45 to 637 1 to 601       601/601
(100 %)		 13 diff
(97.9 %id)
BM912561 amelanotic melanoma, cell line, skin .a 90 to 591 1 to 502       502/1236
(40 %)		 3 diff
(99.8 %id)
BM913079 amelanotic melanoma, cell line, skin .a 113 to 565 1 to 453       453/1273
(35 %)		 7 diff
(99.5 %id)
BM559672 amelanotic melanoma, cell line, skin .a 89 to 797 1 to 716       716/1057
(67 %)		 16 diff
(98.5 %id)
BM915522 amelanotic melanoma, cell line, skin .a 65 to 1043 1 to 992       992/1042
(95 %)		 18 diff
(98.3 %id)
BM460403 eye, retinoblastoma .a 71 to 418 1 to 352       352/1160
(30 %)		 10 diff
(99.2 %id)
BM423437 amelanotic melanoma, cell line, skin .a 1075 to 1577 1 to 503   AAA   503/503
(100 %)		 0 diff
(100 %id)
BM808480 ovary (pool of 3) .f 1 to 566 12 to 579 E26D K35E L36G R37A A39G ... tiling clone,   568/1167
(48 %)		 16 diff
(98.7 %id)
BM126478 Islets of Langerhans, Pancreas .a 845 to 1417 1 to 573       573/573
(100 %)		 1 diff
(99.9 %id)
CK819050 Islets of Langerhans, Pancreas .a 829 to 1420 1 to 592       592/592
(100 %)		 0 diff
(100 %id)
BM805678 brain, hippocampus .a 59 to 716 125 to 782       658/1154
(57 %)		 14 diff
(98.8 %id)
BM924986 pooled lung and spleen .a 930 to 1574 1 to 644       644/1132
(56 %)		 5 diff
(99.6 %id)
BQ003291 Chondrosarcoma, Left Pelvis .a 990 to 1575 602 to 19   AAA   584/584
(100 %)		 8 diff
(98.7 %id)
BQ212932 melanotic melanoma, skin .a 307 to 1108 1 to 806       806/870
(92 %)		 14 diff
(98.4 %id)
BQ086359 Islets of Langerhans, Pancreas .a 1055 to 1575 1 to 521   fully sequenced,   521/521
(100 %)		 0 diff
(100 %id)
BQ102428 Islets of Langerhans, Pancreas .a 1303 to 1576 286 to 13   fully sequenced, AAA   274/274
(100 %)		 1 diff
(99.7 %id)
BU187197 eye, retinoblastoma .a 88 to 801 9 to 740       730/919
(79 %)		 29 diff
(96.9 %id)
BU178670 eye, retinoblastoma .a 78 to 976 6 to 907       902/917
(98 %)		 27 diff
(97.1 %id)
BQ722461 sympathetic trunk .a 1398 to 1578 1 to 181   AAA   181/181
(100 %)		 0 diff
(100 %id)
BQ689506 ductal carcinoma, cell line, Pancreas .a 14 to 589 1 to 575       575/896
(64 %)		 13 diff
(98.6 %id)
BU848786 ovary, teratocarcinoma, cell line .a 14 to 809 1 to 798       798/931
(85 %)		 6 diff
(99.4 %id)
CX165332 human embryonic stem cells differentiated toan early endodermal cell type .a 110 to 880 1 to 771       771/771
(100 %)		 0 diff
(100 %id)
CX757053 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 162 to 801 1 to 635     Submitted on the opposite strand 635/751
(84 %)		 12 diff
(98.5 %id)
CX756032 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 70 to 763 1 to 692     Submitted on the opposite strand 692/693
(99 %)		 12 diff
(98.3 %id)
CD252042 White Matter .a 82 to 594 1 to 514       514/886
(58 %)		 4 diff
(99.6 %id)
CF126098 Chondrosarcoma Lung Metastasis cell lines, lung .b 121 to 950 1 to 828   tiling clone,   828/828
(100 %)		 3 diff
(99.7 %id)
DA603762   .a 1 to 515 2 to 517   capped   516/516
(100 %)		 1 diff
(99.9 %id)
TI_57150855   .a 85 to 909 68 to 892       825/961
(85 %)		 14 diff
(98.6 %id)
TI_57236346   .a 548 to 1024 30 to 523   AAA   494/717
(68 %)		 32 diff
(95.6 %id)
TI_57236743   .a 62 to 661 31 to 636       606/637
(95 %)		 15 diff
(97.7 %id)
TI_44350065   .a 26 to 672 121 to 780       660/910
(72 %)		 85 diff
(90.7 %id)
TI_44350130   .a 26 to 809 120 to 903       784/946
(82 %)		 12 diff
(98.8 %id)
TI_59380482   .a 46 to 637 56 to 655       600/600
(100 %)		 12 diff
(98.0 %id)
TI_59391028   .a 504 to 1124 111 to 740       630/630
(100 %)		 10 diff
(98.5 %id)
BP430644   .a 726 to 1096 1 to 372       372/372
(100 %)		 5 diff
(98.7 %id)
NM_004704.3   .a 35 to 1577 1 to 1543 exact RefSeq, AAA   1543/1543
(100 %)		 1 diff
(100.0 %id)
CR982861 T-Lymphocytes .d-u 469 to 1204 1 to 736 exact tiling clone,   736/738
(99 %)		 1 diff
(99.9 %id)
BM738183 Ascites, stomach .a 55 to 660 1 to 603       605/603
(100 %)		 9 diff
(98.6 %id)
BM756036 Ascites, stomach .a 55 to 572 1 to 518       518/518
(100 %)		 0 diff
(100 %id)
BM772005 stomach .a 576 to 1173 1 to 597       597/597
(100 %)		 1 diff
(99.9 %id)
BM772454 stomach .a 576 to 1271 1 to 695       695/695
(100 %)		 1 diff
(99.9 %id)
BM825100 Ascites, stomach .a 1059 to 1576 534 to 17   AAA Submitted on the opposite strand 518/518
(100 %)		 3 diff
(99.5 %id)
BM825741 Ascites, stomach .a 312 to 733 1 to 422       422/422
(100 %)		 0 diff
(100 %id)
BP348533 brain .a 38 to 608 1 to 573       573/573
(100 %)		 4 diff
(99.4 %id)
BP348561 brain .a 38 to 620 1 to 583       583/583
(100 %)		 13 diff
(97.8 %id)
T15892   .a 1333 to 1577 245 to 1       245/294
(83 %)		 1 diff
(99.7 %id)
DR006521 Spleen .a 45 to 752 20 to 728       709/728
(97 %)		 7 diff
(99.1 %id)
DB163113 thymus .d-u 1 to 589 2 to 590   tiling clone, capped   589/589
(100 %)		 0 diff
(100 %id)
TI_149288534   .a 877 to 1578 805 to 105   AAA   701/701
(100 %)		 5 diff
(99.3 %id)
TI_149301023   .a 718 to 1578 935 to 85   AAA   851/975
(87 %)		 15 diff
(98.5 %id)
TI_154008185   .a 911 to 1578 807 to 145   AAA   663/903
(73 %)		 32 diff
(96.5 %id)
TI_154188938   .b 121 to 1084 46 to 1002   tiling clone,   957/1028
(93 %)		 17 diff
(98.4 %id)
BM970376 lung .a 942 to 1578 655 to 19   AAA   637/637
(100 %)		 4 diff
(99.4 %id)
BM976987 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 957 to 1578 640 to 19   AAA   622/622
(100 %)		 0 diff
(100 %id)
CB243525 Human Lung Epithelial cells, lung .a 854 to 1573 737 to 19   AAA   719/722
(99 %)		 2 diff
(99.8 %id)
BM676339 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1303 to 1575 291 to 19   fully sequenced, AAA   273/273
(100 %)		 0 diff
(100 %id)
BM712593 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1014 to 1575 1 to 562   fully sequenced, AAA   562/562
(100 %)		 0 diff
(100 %id)
BU624141 cell lines, Enchondroma .a 929 to 1577 667 to 19   AAA   649/649
(100 %)		 1 diff
(99.9 %id)
BU631813 cell lines, Chondrosarcoma .a 1141 to 1578 456 to 19   AAA   438/438
(100 %)		 9 diff
(98.0 %id)
BU622988 cell lines, Chondrosarcoma .a 957 to 1576 638 to 19   AAA   620/620
(100 %)		 0 diff
(100 %id)
CA432688 cell lines, Chondrosarcoma .e-u 1 to 737 754 to 19 G8X G12V L13S Q14R G15A ... tiling clone, AAA   736/736
(100 %)		 2 diff
(99.8 %id)
AW134863   .a 845 to 1417 1 to 573   AAA Suspected internal deletion, this clone was ignored 573/573
(100 %)		 1 diff
(99.9 %id)
BU165708 testis .a 829 to 1420 1 to 592     Suspected internal deletion, this clone was ignored 592/592
(100 %)		 0 diff
(100 %id)
BQ692008 ductal carcinoma, cell line, Pancreas .a 829 to 1420 1 to 592     Suspected internal deletion, this clone was ignored 592/592
(100 %)		 0 diff
(100 %id)
BM805678 brain, hippocampus .a 59 to 716 125 to 782       658/1154
(57 %)		 14 diff
(98.8 %id)
BM805678 brain, hippocampus .a 59 to 716 125 to 782       658/1154
(57 %)		 14 diff
(98.8 %id)
BM924986 pooled lung and spleen .a 930 to 1574 1 to 644       644/1132
(56 %)		 5 diff
(99.6 %id)
BQ003291 Chondrosarcoma, Left Pelvis .a 990 to 1575 602 to 19   AAA   584/584
(100 %)		 8 diff
(98.7 %id)
BQ003291 Chondrosarcoma, Left Pelvis .a 990 to 1575 602 to 19   AAA   584/584
(100 %)		 8 diff
(98.7 %id)
BQ212932 melanotic melanoma, skin .a 307 to 1108 1 to 806       806/870
(92 %)		 14 diff
(98.4 %id)
BQ212932 melanotic melanoma, skin .a 307 to 1108 1 to 806       806/870
(92 %)		 14 diff
(98.4 %id)
BQ086359 Islets of Langerhans, Pancreas .a 1055 to 1575 1 to 521   fully sequenced,   521/521
(100 %)		 0 diff
(100 %id)
BQ086359 Islets of Langerhans, Pancreas .a 1055 to 1575 1 to 521   fully sequenced,   521/521
(100 %)		 0 diff
(100 %id)
BQ102428 Islets of Langerhans, Pancreas .a 1303 to 1576 286 to 13   fully sequenced, AAA   274/274
(100 %)		 1 diff
(99.7 %id)
BQ102428 Islets of Langerhans, Pancreas .a 1303 to 1576 286 to 13   fully sequenced, AAA   274/274
(100 %)		 1 diff
(99.7 %id)
BU187197 eye, retinoblastoma .a 88 to 801 9 to 740       730/919
(79 %)		 29 diff
(96.9 %id)
BU187197 eye, retinoblastoma .a 88 to 801 9 to 740       730/919
(79 %)		 29 diff
(96.9 %id)
BU178670 eye, retinoblastoma .a 78 to 976 6 to 907       902/917
(98 %)		 27 diff
(97.1 %id)
BU178670 eye, retinoblastoma .a 78 to 976 6 to 907       902/917
(98 %)		 27 diff
(97.1 %id)
BQ722461 sympathetic trunk .a 1398 to 1578 1 to 181   AAA   181/181
(100 %)		 0 diff
(100 %id)
BQ689506 ductal carcinoma, cell line, Pancreas .a 14 to 589 1 to 575       575/896
(64 %)		 13 diff
(98.6 %id)
BQ689506 ductal carcinoma, cell line, Pancreas .a 14 to 589 1 to 575       575/896
(64 %)		 13 diff
(98.6 %id)
BU848786 ovary, teratocarcinoma, cell line .a 14 to 809 1 to 798       798/931
(85 %)		 6 diff
(99.4 %id)
BU848786 ovary, teratocarcinoma, cell line .a 14 to 809 1 to 798       798/931
(85 %)		 6 diff
(99.4 %id)
CX165332 human embryonic stem cells differentiated toan early endodermal cell type .a 110 to 880 1 to 771       771/771
(100 %)		 0 diff
(100 %id)
CX757053 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 162 to 801 1 to 635     Submitted on the opposite strand 635/751
(84 %)		 12 diff
(98.5 %id)
CX757053 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 162 to 801 1 to 635     Submitted on the opposite strand 635/751
(84 %)		 12 diff
(98.5 %id)
CX756032 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 70 to 763 1 to 692     Submitted on the opposite strand 692/693
(99 %)		 12 diff
(98.3 %id)
CX756032 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 70 to 763 1 to 692     Submitted on the opposite strand 692/693
(99 %)		 12 diff
(98.3 %id)
CD252042 White Matter .a 82 to 594 1 to 514       514/886
(58 %)		 4 diff
(99.6 %id)
CF126098 Chondrosarcoma Lung Metastasis cell lines, lung .b 121 to 950 1 to 828   tiling clone,   828/828
(100 %)		 3 diff
(99.7 %id)
CF126098 Chondrosarcoma Lung Metastasis cell lines, lung .b 121 to 950 1 to 828   tiling clone,   828/828
(100 %)		 3 diff
(99.7 %id)
DA603762   .a 1 to 515 2 to 517   capped   516/516
(100 %)		 1 diff
(99.9 %id)
TI_57150855   .a 85 to 909 68 to 892       825/961
(85 %)		 14 diff
(98.6 %id)
TI_57236346   .a 548 to 1024 30 to 523   AAA   494/717
(68 %)		 32 diff
(95.6 %id)
TI_57236743   .a 62 to 661 31 to 636       606/637
(95 %)		 15 diff
(97.7 %id)
TI_44350065   .a 26 to 672 121 to 780       660/910
(72 %)		 85 diff
(90.7 %id)
TI_44350130   .a 26 to 809 120 to 903       784/946
(82 %)		 12 diff
(98.8 %id)
TI_59380482   .a 46 to 637 56 to 655       600/600
(100 %)		 12 diff
(98.0 %id)
TI_59391028   .a 504 to 1124 111 to 740       630/630
(100 %)		 10 diff
(98.5 %id)
BP430644   .a 726 to 1096 1 to 372       372/372
(100 %)		 5 diff
(98.7 %id)
NM_004704.3   .a 35 to 1577 1 to 1543 exact RefSeq, AAA   1543/1543
(100 %)		 1 diff
(100.0 %id)
CR982861 T-Lymphocytes .d-u 469 to 1204 1 to 736 exact tiling clone,   736/738
(99 %)		 1 diff
(99.9 %id)
BM738183 Ascites, stomach .a 55 to 660 1 to 603       605/603
(100 %)		 9 diff
(98.6 %id)
BM738183 Ascites, stomach .a 55 to 660 1 to 603       605/603
(100 %)		 9 diff
(98.6 %id)
BM756036 Ascites, stomach .a 55 to 572 1 to 518       518/518
(100 %)		 0 diff
(100 %id)
BM756036 Ascites, stomach .a 55 to 572 1 to 518       518/518
(100 %)		 0 diff
(100 %id)
BM772005 stomach .a 576 to 1173 1 to 597       597/597
(100 %)		 1 diff
(99.9 %id)
BM772454 stomach .a 576 to 1271 1 to 695       695/695
(100 %)		 1 diff
(99.9 %id)
BM825100 Ascites, stomach .a 1059 to 1576 534 to 17   AAA Submitted on the opposite strand 518/518
(100 %)		 3 diff
(99.5 %id)
BM825100 Ascites, stomach .a 1059 to 1576 534 to 17   AAA Submitted on the opposite strand 518/518
(100 %)		 3 diff
(99.5 %id)
BM825741 Ascites, stomach .a 312 to 733 1 to 422       422/422
(100 %)		 0 diff
(100 %id)
BM825741 Ascites, stomach .a 312 to 733 1 to 422       422/422
(100 %)		 0 diff
(100 %id)
BP348533 brain .a 38 to 608 1 to 573       573/573
(100 %)		 4 diff
(99.4 %id)
BP348561 brain .a 38 to 620 1 to 583       583/583
(100 %)		 13 diff
(97.8 %id)
T15892   .a 1333 to 1577 245 to 1       245/294
(83 %)		 1 diff
(99.7 %id)
DR006521 Spleen .a 45 to 752 20 to 728       709/728
(97 %)		 7 diff
(99.1 %id)
DB163113 thymus .d-u 1 to 589 2 to 590   tiling clone, capped   589/589
(100 %)		 0 diff
(100 %id)
TI_149288534   .a 877 to 1578 805 to 105   AAA   701/701
(100 %)		 5 diff
(99.3 %id)
TI_149301023   .a 718 to 1578 935 to 85   AAA   851/975
(87 %)		 15 diff
(98.5 %id)
TI_154008185   .a 911 to 1578 807 to 145   AAA   663/903
(73 %)		 32 diff
(96.5 %id)
TI_154188938   .b 121 to 1084 46 to 1002   tiling clone,   957/1028
(93 %)		 17 diff
(98.4 %id)
BM970376 lung .a 942 to 1578 655 to 19   AAA   637/637
(100 %)		 4 diff
(99.4 %id)
BM976987 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 957 to 1578 640 to 19   AAA   622/622
(100 %)		 0 diff
(100 %id)
BM976987 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 957 to 1578 640 to 19   AAA   622/622
(100 %)		 0 diff
(100 %id)
CB243525 Human Lung Epithelial cells, lung .a 854 to 1573 737 to 19   AAA   719/722
(99 %)		 2 diff
(99.8 %id)
CB243525 Human Lung Epithelial cells, lung .a 854 to 1573 737 to 19   AAA   719/722
(99 %)		 2 diff
(99.8 %id)
BM676339 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1303 to 1575 291 to 19   fully sequenced, AAA   273/273
(100 %)		 0 diff
(100 %id)
BM676339 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1303 to 1575 291 to 19   fully sequenced, AAA   273/273
(100 %)		 0 diff
(100 %id)
BM712593 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1014 to 1575 1 to 562   fully sequenced, AAA   562/562
(100 %)		 0 diff
(100 %id)
BM712593 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1014 to 1575 1 to 562   fully sequenced, AAA   562/562
(100 %)		 0 diff
(100 %id)
BU624141 cell lines, Enchondroma .a 929 to 1577 667 to 19   AAA   649/649
(100 %)		 1 diff
(99.9 %id)
BU624141 cell lines, Enchondroma .a 929 to 1577 667 to 19   AAA   649/649
(100 %)		 1 diff
(99.9 %id)
BU631813 cell lines, Chondrosarcoma .a 1141 to 1578 456 to 19   AAA   438/438
(100 %)		 9 diff
(98.0 %id)
BU631813 cell lines, Chondrosarcoma .a 1141 to 1578 456 to 19   AAA   438/438
(100 %)		 9 diff
(98.0 %id)
BU622988 cell lines, Chondrosarcoma .a 957 to 1576 638 to 19   AAA   620/620
(100 %)		 0 diff
(100 %id)
BU622988 cell lines, Chondrosarcoma .a 957 to 1576 638 to 19   AAA   620/620
(100 %)		 0 diff
(100 %id)
CA432688 cell lines, Chondrosarcoma .e-u 1 to 737 754 to 19 G8X G12V L13S Q14R G15A ... tiling clone, AAA   736/736
(100 %)		 2 diff
(99.8 %id)
CA432688 cell lines, Chondrosarcoma .e-u 1 to 737 754 to 19 G8X G12V L13S Q14R G15A ... tiling clone, AAA   736/736
(100 %)		 2 diff
(99.8 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d-u, .e-u, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI