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Gene RPS26TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
103 supporting clones for gene RPS26 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB010573 colon, tumor tissue .a-u 1 to 556 2 to 557 exact tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
BU839421 melanotic melanoma, cell line, skin .b 1 to 628 1 to 621 P112T P114A M115H tiling clone, AAA   621/621
(100 %)
2 diff
(99.7 %id)
BM507057 insulinoma, Pancreas .b 28 to 558 8 to 530       523/530
(98 %)
6 diff
(98.9 %id)
BF104807 Kidney .b 35 to 543 1 to 501       501/501
(100 %)
6 diff
(98.9 %id)
BP430841   .b 40 to 416 1 to 369       369/369
(100 %)
5 diff
(98.7 %id)
CD174030 embryonic stem cells, WA01, passage 38 .b 47 to 628 22 to 595 exact AAA   574/595
(96 %)
6 diff
(99.0 %id)
BE612409 adenocarcinoma, ovary .b 81 to 626 1 to 538 exact tiling clone,   538/538
(100 %)
1 diff
(99.9 %id)
CN270908 embryonic stem cells, DMSO-treated H9 cellline .b 213 to 739 1 to 527 exact     527/527
(100 %)
0 diff
(100 %id)
CF129685 Chondrosarcoma Lung Metastasis cell lines, lung .b 608 to 1082 1 to 476   tiling clone,   476/526
(90 %)
3 diff
(99.5 %id)
TI_154191438   .b 608 to 1082 51 to 526       476/1012
(47 %)
3 diff
(99.8 %id)
DW430612 Liver .b 986 to 1244 272 to 14   tiling clone,   259/272
(95 %)
0 diff
(100 %id)
DW432330 Liver .b 992 to 1244 266 to 14       253/266
(95 %)
0 diff
(100 %id)
BG777482 adenocarcinoma, Prostate .c 1 to 656 1 to 656   tiling clone,   656/657
(99 %)
13 diff
(98.1 %id)
BM172358 adenocarcinoma, Prostate .c 2 to 526 1 to 525       525/525
(100 %)
10 diff
(98.1 %id)
BM553510 duodenal adenocarcinoma, cell line, small intestine .c 35 to 728 1 to 692 exact AAA   692/692
(100 %)
3 diff
(99.6 %id)
AV681946 hepatocellular carcinoma .c 49 to 694 1 to 646 N86K R87S S88I R89S E90*     646/657
(98 %)
14 diff
(97.9 %id)
NM_001029.3   .c 49 to 728 1 to 680 exact RefSeq, AAA   680/680
(100 %)
0 diff
(100 %id)
BU954276 mixed (pool of 40 RNAs) .c 50 to 726 1 to 676 K113X     676/677
(99 %)
4 diff
(99.5 %id)
CD174788 embryonic stem cells, WA01, passage 38 .c 51 to 728 23 to 700 K3E tiling clone, AAA   678/700
(96 %)
7 diff
(99.0 %id)
BG611251 adenocarcinoma, Prostate .c 51 to 708 1 to 666 R85Q N86E R87S S88I R89S ...     666/721
(92 %)
17 diff
(97.7 %id)
N25117 melanocyte .c 55 to 690 1 to 636 H17T V18C Q19S P20L I21F ...     636/636
(100 %)
19 diff
(97.1 %id)
BM800488 leiomyosarcoma, uterus .c 57 to 728 12 to 682 exact AAA   671/682
(98 %)
7 diff
(99.0 %id)
BU930916 ovary, teratocarcinoma, cell line .c 58 to 728 1 to 671 exact AAA   671/671
(100 %)
1 diff
(99.9 %id)
BF573666 melanotic melanoma, high MDR, skin .c 64 to 726 1 to 662 H17T V18C Q19S P20L I21F ...     662/888
(74 %)
18 diff
(98.0 %id)
BG500507 adenocarcinoma, Prostate .c 64 to 730 1 to 670 P99T P112T     670/694
(96 %)
10 diff
(98.6 %id)
BG500010 adenocarcinoma, Prostate .c 64 to 658 1 to 594       594/594
(100 %)
5 diff
(99.2 %id)
BM792365 Ascites, stomach .c 64 to 728 1 to 664 exact     664/664
(100 %)
2 diff
(99.7 %id)
CD248987 embryonic stem cells, WA01, passage 38 .c 65 to 729 26 to 689 R28*     664/714
(92 %)
8 diff
(98.9 %id)
CR611958 Neuroblastoma Cot 25-normalized .c 67 to 730 1 to 664 exact tiling clone,   664/664
(100 %)
0 diff
(100 %id)
BX370921 Neuroblastoma Cot 25-normalized .c 67 to 730 1 to 664 exact     664/664
(100 %)
2 diff
(99.7 %id)
BX370922 Neuroblastoma Cot 25-normalized .c 67 to 729 1 to 664 A48V S54C F101L G105D A107D ...     664/664
(100 %)
16 diff
(97.6 %id)
BX376032 Neuroblastoma Cot 25-normalized .c 67 to 730 1 to 664 exact     664/664
(100 %)
1 diff
(99.9 %id)
BM826435 Ascites, stomach .c 75 to 614 1 to 540       540/540
(100 %)
2 diff
(99.7 %id)
BQ773828 Chondrosarcoma Grade II, Left Pelvis .c 81 to 728 666 to 19 exact AAA   648/658
(98 %)
0 diff
(100 %id)
BG110689 Bone, osteosarcoma, cell line .c 84 to 730 1 to 646 T96K P97T P99T     646/664
(97 %)
8 diff
(98.8 %id)
BC002604 Lymph, Burkitt lymphoma .c 85 to 728 1 to 644 exact available from MGC, AAA   644/644
(100 %)
1 diff
(99.9 %id)
BE567374 bladder, carcinoma, cell line .c 85 to 718 1 to 633 L64A P65S K66Q L67A Y68V ...     633/696
(90 %)
13 diff
(98.2 %id)
CD172871 embryonic stem cells, WA01, passage 38 .c 86 to 728 26 to 668 S76C AAA   643/668
(96 %)
7 diff
(99.0 %id)
CD048085 embryonic stem cells, WA01, passage 38 .c 87 to 728 23 to 664 F39L     642/949
(67 %)
11 diff
(98.9 %id)
BP273386   .c 87 to 659 1 to 574       574/574
(100 %)
6 diff
(99.0 %id)
BM912248 amelanotic melanoma, cell line, skin .c 88 to 727 1 to 640 exact AAA   640/672
(95 %)
2 diff
(99.8 %id)
AA188062   .c 89 to 662 1 to 569 H17T V18C Q19S P20L I21F ...     569/571
(99 %)
10 diff
(98.3 %id)
R76474 placenta .c 97 to 467 1 to 376       376/381
(98 %)
11 diff
(97.2 %id)
BE394149 endometrium, adenocarcinoma cell line, uterus .c 104 to 707 1 to 604 exact     604/604
(100 %)
2 diff
(99.7 %id)
BF794655 lymph, lymphoma, cell line .c 104 to 728 1 to 627 T96N P97T P99T R100P F101I ...     627/644
(97 %)
3 diff
(99.6 %id)
AA346106 NULL, omentum .c 109 to 403 1 to 295       295/295
(100 %)
2 diff
(99.4 %id)
AW964109   .c 109 to 626 1 to 518   AAA   518/611
(84 %)
4 diff
(99.4 %id)
BG163564 hypernephroma, cell line, Kidney .c 114 to 728 1 to 614 H17T V18C Q19S P20L I21F ...     614/633
(96 %)
15 diff
(97.7 %id)
CN270920 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 115 to 568 9 to 463       455/463
(98 %)
7 diff
(98.5 %id)
BG028379 Bone, osteosarcoma, cell line .c 116 to 728 1 to 612 T96K P98H R100I F101*     612/624
(98 %)
10 diff
(98.4 %id)
BP418742 small intestine .c 118 to 594 1 to 477     Submitted on the opposite strand 477/477
(100 %)
1 diff
(99.8 %id)
BE268871 Burkitt lymphoma, lymph .c 120 to 717 1 to 608 T96E P99T A107C AAA   608/617
(98 %)
32 diff
(94.9 %id)
BU508554 leiomyosarcoma, uterus .c 120 to 728 1 to 608 P108S AAA   608/608
(100 %)
2 diff
(99.7 %id)
W32999 parathyroid gland, parathyroid tumor .c 135 to 579 1 to 444       444/444
(100 %)
4 diff
(99.1 %id)
BF360979 ovary .c 144 to 303 167 to 9       159/194
(81 %)
0 diff
(100 %id)
AW793468 uterus .c 211 to 547 338 to 2       337/338
(99 %)
8 diff
(97.7 %id)
DW410716 Liver .c 279 to 601 10 to 332       323/332
(97 %)
6 diff
(98.2 %id)
BE737643 brain, glioblastoma .c 279 to 737 1 to 461 K93R D94T R95E T96H P98H ...     461/756
(60 %)
11 diff
(98.6 %id)
BQ276862 mixed (pool of 40 RNAs) .c 285 to 726 1 to 442 exact     442/477
(92 %)
3 diff
(99.4 %id)
BQ429315 bone marrow, from acute myelogenous leukemia .c 285 to 727 1 to 443 exact AAA   443/443
(100 %)
3 diff
(99.4 %id)
BU588092.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 726 1 to 442 exact   also hits gene RPS26P25 442/442
(100 %)
2 diff
(99.6 %id)
BU590092 mixed (pool of 40 RNAs) .c 285 to 726 1 to 442 exact AAA   442/442
(100 %)
2 diff
(99.6 %id)
BU602548.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 731 1 to 445 R5K R6E N7Q N8W G9S ... AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base), also hits gene RPS26P25 445/445
(100 %)
4 diff
(99.2 %id)
BU535053.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 727 1 to 442 exact   also hits gene RPS26P25 442/448
(98 %)
3 diff
(99.4 %id)
BU852537 testis .c 285 to 724 1 to 439 L64R     439/826
(53 %)
4 diff
(99.6 %id)
BU853129 testis .c 285 to 730 1 to 446 L64R     446/475
(93 %)
8 diff
(98.4 %id)
BU928080.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 727 1 to 442 exact   also hits gene RPS26P25 442/448
(98 %)
3 diff
(99.4 %id)
BU928256 mixed (pool of 40 RNAs) .c 285 to 730 1 to 446 exact     446/478
(93 %)
6 diff
(98.8 %id)
BU928418.
matches multiple genes
brain, glioblastoma .c 285 to 708 1 to 424 exact   also hits gene RPS26P25 424/424
(100 %)
2 diff
(99.6 %id)
BU933324.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 729 1 to 445 exact   also hits gene RPS26P25 445/478
(93 %)
4 diff
(99.2 %id)
BU934346.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 721 1 to 437 exact   also hits gene RPS26P25 437/897
(48 %)
6 diff
(99.4 %id)
BU935543.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 729 1 to 445 exact   also hits gene RPS26P25 445/445
(100 %)
2 diff
(99.6 %id)
BU942719.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 723 1 to 439 exact   also hits gene RPS26P25 439/444
(98 %)
3 diff
(99.4 %id)
BU954444.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 606 1 to 322     also hits gene RPS26P25 322/329
(97 %)
5 diff
(98.5 %id)
BU957855.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 724 1 to 440 exact   also hits gene RPS26P25 440/444
(99 %)
3 diff
(99.4 %id)
BU960532.
matches multiple genes
mixed (pool of 40 RNAs) .c 285 to 726 1 to 441 exact   also hits gene RPS26P25 441/479
(92 %)
4 diff
(99.2 %id)
CD522533.
matches multiple genes
pooled .c 285 to 717 1 to 433 exact AAA also hits gene RPS26P25 433/433
(100 %)
3 diff
(99.4 %id)
CD641403 pooled .c 285 to 727 1 to 443 exact AAA   443/443
(100 %)
3 diff
(99.4 %id)
BP354227   .d 1 to 582 1 to 581 G14A R15A G16A H17T V18C ...     581/581
(100 %)
4 diff
(99.4 %id)
AV763212 bone marrow .d 2 to 417 1 to 408 K4*     408/409
(99 %)
11 diff
(97.4 %id)
DA952788 Spleen .d 3 to 576 2 to 575 exact tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
BF313669 brain, neuroblastoma .d 16 to 844 1 to 842 exact     803/842
(95 %)
37 diff
(95.7 %id)
BI195116 brain, neuroblastoma .d 16 to 508 1 to 503 K4N     503/654
(76 %)
20 diff
(97.0 %id)
BE080719 breast .d 17 to 308 300 to 9     Submitted on the opposite strand 292/307
(95 %)
0 diff
(100 %id)
AA360942   .d 23 to 265 1 to 243 exact     243/243
(100 %)
0 diff
(100 %id)
CR980525 T-Lymphocytes .d 32 to 735 1 to 704       704/704
(100 %)
3 diff
(99.6 %id)
CR984039 T-Lymphocytes .d 32 to 694 1 to 663       663/663
(100 %)
4 diff
(99.4 %id)
CT004947 T-Lymphocytes .d 38 to 890 18 to 871       854/871
(98 %)
5 diff
(99.5 %id)
T95159 liver and spleen .d 320 to 576 1 to 257       257/257
(100 %)
2 diff
(99.3 %id)
BE260973 brain, neuroblastoma .d 371 to 767 367 to 769       662/769
(86 %)
31 diff
(96.0 %id)
TI_159715108   .d 377 to 1202 920 to 103   AAA   818/1023
(79 %)
13 diff
(98.8 %id)
CA413381 Knee, Osteoarthritic Cartilage .d 556 to 1202 665 to 19   tiling clone, AAA   647/647
(100 %)
0 diff
(100 %id)
CB321972 Human Lung Epithelial cells, lung .d 563 to 1202 656 to 19   AAA   638/638
(100 %)
1 diff
(99.9 %id)
BU623060 cell lines, Chondrosarcoma .d 580 to 1202 641 to 19   AAA   623/623
(100 %)
0 diff
(100 %id)
BY993735   .d 648 to 1202 601 to 47   AAA Submitted on the opposite strand 555/555
(100 %)
7 diff
(98.8 %id)
TI_149278804   .d 692 to 1202 594 to 84   AAA   511/700
(73 %)
0 diff
(100 %id)
BU678622 lung, Primary Lung Epithelial Cells .d 692 to 1202 529 to 19   AAA   511/529
(96 %)
0 diff
(100 %id)
T95063 liver and spleen .d 802 to 1204 411 to 3   tiling clone,   409/416
(98 %)
6 diff
(98.6 %id)
AW151219 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .d 820 to 1075 260 to 6       255/260
(98 %)
0 diff
(100 %id)
AA778380 heart .d 913 to 1202 291 to 1       291/291
(100 %)
1 diff
(99.7 %id)
BM994934 Chondrosarcoma, Left Pubic Bone .d 933 to 1202 288 to 19   AAA   270/278
(97 %)
0 diff
(100 %id)
BU588092.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 563 1 to 442 exact   also hits gene RPS26P25 442/442
(100 %)
1 diff
(99.8 %id)
BU602548.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 565 1 to 442 R5K R6E N7Q N8W G9S ... AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base), also hits gene RPS26P25 442/445
(99 %)
4 diff
(99.2 %id)
BU535053.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 564 1 to 442 exact   also hits gene RPS26P25 442/448
(98 %)
2 diff
(99.6 %id)
BU928080.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 564 1 to 442 exact   also hits gene RPS26P25 442/448
(98 %)
2 diff
(99.6 %id)
BU928418.
matches multiple genes
brain, glioblastoma P25.a 122 to 545 1 to 424 exact   also hits gene RPS26P25 424/424
(100 %)
1 diff
(99.8 %id)
BU933324.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 566 1 to 445 exact   also hits gene RPS26P25 445/478
(93 %)
3 diff
(99.4 %id)
BU934346.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 558 1 to 437 exact   also hits gene RPS26P25 437/897
(48 %)
5 diff
(99.5 %id)
BU935543.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 566 1 to 445 exact   also hits gene RPS26P25 445/445
(100 %)
1 diff
(99.8 %id)
BU942719.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 560 1 to 439 exact   also hits gene RPS26P25 439/444
(98 %)
2 diff
(99.6 %id)
BU954444.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 443 1 to 322     also hits gene RPS26P25 322/329
(97 %)
4 diff
(98.8 %id)
BU957855.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 561 1 to 440 exact   also hits gene RPS26P25 440/444
(99 %)
2 diff
(99.6 %id)
BU960532.
matches multiple genes
mixed (pool of 40 RNAs) P25.a 122 to 563 1 to 441 exact   also hits gene RPS26P25 441/479
(92 %)
3 diff
(99.4 %id)
CD522533.
matches multiple genes
pooled P25.a 122 to 554 1 to 433 exact AAA also hits gene RPS26P25 433/433
(100 %)
2 diff
(99.6 %id)
AV694268 hepatocellular carcinoma Gene RPS26, variant not shown         Suspected internal deletion, this clone was ignored    
AV692832 hepatocellular carcinoma Gene RPS26, variant not shown         Suspected internal deletion, this clone was ignored    
BF574184 muscle (skeletal) Gene RPS26, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI