To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene RPS17TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
459 representative clones for gene RPS17 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM457623.
matches multiple genes
lymph, lymphoma, cell line .a 1 to 583 1 to 583 exact tiling clone, also hits gene sukama 583/671
(86 %)
2 diff
(99.8 %id)
CR612555.
matches multiple genes
neuroblastoma .b 1 to 1877 1 to 1877 exact tiling clone, also hits gene sukama 1877/1877
(100 %)
0 diff
(100 %id)
DB036141.
matches multiple genes
testis .c 1 to 552 2 to 553 exact tiling clone, capped also hits gene sukama 552/552
(100 %)
1 diff
(99.9 %id)
DA613759.
matches multiple genes
  .c 3 to 572 2 to 572 F28L H29P T30H N31E K32Q ... capped also hits gene sukama 571/571
(100 %)
3 diff
(99.5 %id)
DA930798.
matches multiple genes
small intestine .c 3 to 574 2 to 573 exact capped also hits gene sukama 572/572
(100 %)
0 diff
(100 %id)
TI_45215635.
matches multiple genes
  .c 7 to 798 91 to 883 exact   also hits gene sukama 793/890
(89 %)
8 diff
(99.2 %id)
DA080513.
matches multiple genes
cerebellum .c 8 to 587 2 to 587 R23A L24P N26Q D27R F28L ... capped also hits gene sukama 586/587
(99 %)
8 diff
(98.7 %id)
DA466418.
matches multiple genes
  .c 8 to 573 2 to 567 exact capped also hits gene sukama 566/566
(100 %)
0 diff
(100 %id)
DA488238.
matches multiple genes
brain .c 8 to 572 2 to 566 exact capped also hits gene sukama 565/565
(100 %)
0 diff
(100 %id)
DA645732.
matches multiple genes
mammary gland .c 8 to 762 2 to 754 D99X capped also hits gene sukama 753/753
(100 %)
9 diff
(98.9 %id)
DA891366.
matches multiple genes
rectum .c 8 to 567 2 to 561 exact capped also hits gene sukama 560/560
(100 %)
0 diff
(100 %id)
DA903575.
matches multiple genes
  .c 8 to 561 2 to 556 V54X T55H H56A L57S M58D ... capped also hits gene sukama 555/555
(100 %)
1 diff
(99.9 %id)
DA922251.
matches multiple genes
small intestine .c 8 to 565 2 to 560 V34C C35V E36R E37G I38D ... capped also hits gene sukama 559/559
(100 %)
1 diff
(99.9 %id)
DA954877.
matches multiple genes
Spleen .c 8 to 573 2 to 567 exact capped also hits gene sukama 566/566
(100 %)
1 diff
(99.9 %id)
DB117110.
matches multiple genes
thymus .c 8 to 545 2 to 539 I126V capped also hits gene sukama 538/538
(100 %)
2 diff
(99.7 %id)
DA377393.
matches multiple genes
thalamus .c 9 to 576 2 to 570 E36* capped also hits gene sukama 569/569
(100 %)
1 diff
(99.9 %id)
BG818710.
matches multiple genes
anaplastic oligodendroglioma with 1p/19qloss, brain .c 19 to 847 1 to 827 exact   also hits gene sukama 827/827
(100 %)
7 diff
(99.2 %id)
BM012880.
matches multiple genes
brain, neuroblastoma, cell line .c 19 to 846 1 to 839 V110G S111K V112C C113L W114L ...   also hits gene sukama 839/839
(100 %)
16 diff
(98.1 %id)
TI_57217410.
matches multiple genes
  .c 19 to 837 30 to 853 P116S K117*   also hits gene sukama 824/856
(96 %)
30 diff
(96.5 %id)
TI_59382110.
matches multiple genes
  .c 19 to 846 119 to 957 V110G S111K V112C C113L W114L ...   also hits gene sukama 839/839
(100 %)
16 diff
(98.1 %id)
BQ918714.
matches multiple genes
brain, neuroblastoma, cell line .c 21 to 913 1 to 894 exact   also hits gene sukama 894/894
(100 %)
5 diff
(99.5 %id)
CN352364.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 .c 22 to 714 1 to 694 exact   also hits gene sukama 694/697
(99 %)
6 diff
(99.2 %id)
AL515643.
matches multiple genes
brain, neuroblastoma, neuroblastoma cells .c 23 to 942 1 to 900 exact tiling clone, fully sequenced, also hits gene sukama 900/900
(100 %)
1 diff
(99.9 %id)
BI754709.
matches multiple genes
brain .c 24 to 837 1 to 819 P116S K117*   also hits gene sukama 819/822
(99 %)
24 diff
(97.1 %id)
BI917566.
matches multiple genes
brain .c 24 to 842 1 to 821 R14G V15S I16S I17*   also hits gene sukama 821/821
(100 %)
17 diff
(98.0 %id)
CX752391.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 25 to 726 1 to 702 exact   Submitted on the opposite strand, also hits gene sukama 702/702
(100 %)
0 diff
(100 %id)
BQ069565.
matches multiple genes
brain, neuroblastoma, cell line .c 28 to 1007 3 to 991     also hits gene sukama 993/1055
(94 %)
31 diff
(97.1 %id)
BQ069684.
matches multiple genes
brain, neuroblastoma, cell line .c 28 to 899 3 to 887     also hits gene sukama 889/1009
(88 %)
30 diff
(97.1 %id)
BQ072092.
matches multiple genes
brain, neuroblastoma, cell line .c 28 to 981 3 to 967     also hits gene sukama 969/987
(98 %)
30 diff
(97.0 %id)
BU781597.
matches multiple genes
insulinoma, Pancreas .c 28 to 604 1 to 576     also hits gene sukama 575/576
(99 %)
5 diff
(99.2 %id)
BI759866.
matches multiple genes
pooled colon, kidney, stomach .c 33 to 814 10 to 790     also hits gene sukama 783/790
(99 %)
10 diff
(98.8 %id)
BI918669.
matches multiple genes
brain .c 33 to 753 19 to 739     also hits gene sukama 722/742
(97 %)
7 diff
(99.1 %id)
TI_57148632.
matches multiple genes
  .c 33 to 814 79 to 859     also hits gene sukama 780/859
(90 %)
10 diff
(98.9 %id)
TI_57241012.
matches multiple genes
  .c 33 to 753 19 to 739     also hits gene sukama 722/742
(97 %)
7 diff
(99.1 %id)
TI_57244788.
matches multiple genes
  .c 33 to 842 104 to 915     also hits gene sukama 813/915
(88 %)
22 diff
(97.6 %id)
CB265867.
matches multiple genes
adipose .c 38 to 612 1 to 574     also hits gene sukama 574/574
(100 %)
1 diff
(99.9 %id)
CB265752.
matches multiple genes
adipose .c 43 to 721 1 to 680     also hits gene sukama 680/683
(99 %)
2 diff
(99.8 %id)
AA378839.
matches multiple genes
synovial membrane .c 338 to 719 1 to 384     also hits gene sukama 384/384
(100 %)
2 diff
(99.5 %id)
AA343969.
matches multiple genes
gall bladder .c 377 to 612 1 to 236     also hits gene sukama 236/236
(100 %)
0 diff
(100 %id)
BF738516.
matches multiple genes
bladder_tumor .c 607 to 994 392 to 1     Submitted on the opposite strand, also hits gene sukama 392/392
(100 %)
13 diff
(96.7 %id)
AW752714.
matches multiple genes
colon .c 681 to 1356 682 to 7     also hits gene sukama 676/683
(98 %)
0 diff
(100 %id)
AW752711.
matches multiple genes
colon .c 712 to 1352 641 to 1   tiling clone, also hits gene sukama 641/641
(100 %)
2 diff
(99.7 %id)
AL515642.
matches multiple genes
brain, neuroblastoma, neuroblastoma cells .c 912 to 1900 979 to 1   tiling clone, fully sequenced, also hits gene sukama 979/979
(100 %)
1 diff
(99.9 %id)
AA345225.
matches multiple genes
gall bladder .c 971 to 1329 1 to 360     also hits gene sukama 360/360
(100 %)
1 diff
(99.8 %id)
TI_149303761.
matches multiple genes
  .c 971 to 1907 1021 to 102   AAA also hits gene sukama 920/948
(97 %)
35 diff
(96.4 %id)
BX400616.
matches multiple genes
  .c 1004 to 1878 874 to 1     also hits gene sukama 874/874
(100 %)
11 diff
(98.8 %id)
TI_149301423.
matches multiple genes
  .c 1069 to 1907 892 to 61   AAA also hits gene sukama 832/945
(88 %)
13 diff
(98.7 %id)
CV428141.
matches multiple genes
head_neck .c 1140 to 1583 1 to 443     also hits gene sukama 443/443
(100 %)
4 diff
(99.1 %id)
CV428151.
matches multiple genes
head_neck .c 1140 to 1584 1 to 445     also hits gene sukama 445/445
(100 %)
2 diff
(99.6 %id)
CV428138.
matches multiple genes
head_neck .c 1221 to 1623 403 to 1     Submitted on the opposite strand, also hits gene sukama 403/403
(100 %)
2 diff
(99.6 %id)
BU685124.
matches multiple genes
lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1221 to 1907 701 to 16   AAA also hits gene sukama 686/686
(100 %)
2 diff
(99.8 %id)
BM981703.
matches multiple genes
lung, Primary Lung Cystic Fibrosis EpithelialCells .c 1252 to 1907 669 to 14   AAA also hits gene sukama 656/656
(100 %)
3 diff
(99.6 %id)
CA419946.
matches multiple genes
Bone, Human Chondrosarcoma Cell Line .c 1263 to 1907 659 to 16   AAA also hits gene sukama 644/644
(100 %)
4 diff
(99.4 %id)
TI_154090344   .c 1308 to 1907 696 to 90   AAA   607/1355
(44 %)
20 diff
(98.6 %id)
DB321518.
matches multiple genes
mammary gland .c 1436 to 1907 473 to 1     also hits gene sukama 473/473
(100 %)
6 diff
(98.8 %id)
AI804322.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1443 to 1907 465 to 1     also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
CA433901.
matches multiple genes
mixed .c 1447 to 1907 476 to 16   AAA also hits gene sukama 461/461
(100 %)
1 diff
(99.8 %id)
AW197160.
matches multiple genes
2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .c 1473 to 1907 435 to 1     also hits gene sukama 435/435
(100 %)
0 diff
(100 %id)
AI042195.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1496 to 1908 418 to 6     also hits gene sukama 413/418
(98 %)
0 diff
(100 %id)
AI699063.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 1550 to 1910 371 to 8   tiling clone, also hits gene sukama 364/371
(98 %)
0 diff
(100 %id)
BM760477.
matches multiple genes
lymph node, stomach .d 1 to 480 1 to 480 exact tiling clone, also hits gene sukama 480/480
(100 %)
0 diff
(100 %id)
BE311589.
matches multiple genes
Kidney, renal cell adenocarcinoma .d 30 to 515 1 to 486 exact   also hits gene sukama 486/486
(100 %)
0 diff
(100 %id)
NM_001021.3.
matches multiple genes
  .d 35 to 519 1 to 485 exact RefSeq, AAA also hits gene sukama 485/485
(100 %)
0 diff
(100 %id)
BQ681767.
matches multiple genes
melanotic melanoma, cell line, skin .d 36 to 519 1 to 484 exact AAA also hits gene sukama 484/484
(100 %)
0 diff
(100 %id)
BP306684.
matches multiple genes
  .d 36 to 516 1 to 481 exact AAA also hits gene sukama 481/481
(100 %)
0 diff
(100 %id)
BU931914.
matches multiple genes
ovary, teratocarcinoma, cell line .d 38 to 516 1 to 479 exact AAA also hits gene sukama 479/479
(100 %)
0 diff
(100 %id)
BC070222.
matches multiple genes
Pooled, 40 cell lines .d 39 to 520 1 to 482 exact available from MGC, AAA also hits gene sukama 482/482
(100 %)
2 diff
(99.6 %id)
AV714311.
matches multiple genes
  .d 39 to 516 1 to 478 exact AAA also hits gene sukama 478/478
(100 %)
0 diff
(100 %id)
BJ989912.
matches multiple genes
hepatoblastoma .d 39 to 516 1 to 478 exact fully sequenced, also hits gene sukama 478/478
(100 %)
1 diff
(99.8 %id)
M13932.
matches multiple genes
  .d 39 to 516 1 to 477 exact   also hits gene sukama 477/477
(100 %)
4 diff
(99.2 %id)
BM830301.
matches multiple genes
lymph node, stomach .d 39 to 519 1 to 481 exact   also hits gene sukama 481/481
(100 %)
0 diff
(100 %id)
AK311951.
matches multiple genes
thymus .d 40 to 471 1 to 432 exact   also hits gene sukama 432/432
(100 %)
0 diff
(100 %id)
CB109224.
matches multiple genes
Liver .d 40 to 513 1 to 474 exact AAA also hits gene sukama 474/474
(100 %)
0 diff
(100 %id)
CB109632.
matches multiple genes
Liver .d 40 to 516 1 to 477 exact AAA also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
CB114289.
matches multiple genes
Liver .d 40 to 516 1 to 477 exact AAA also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
CB113570.
matches multiple genes
Liver .d 40 to 513 1 to 474 exact   also hits gene sukama 474/474
(100 %)
0 diff
(100 %id)
CB140079.
matches multiple genes
Liver .d 40 to 516 1 to 477 exact AAA also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
CB130753.
matches multiple genes
Liver .d 40 to 516 1 to 477 exact AAA also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
BP318912.
matches multiple genes
pericardium .d 40 to 520 1 to 481 exact AAA also hits gene sukama 481/481
(100 %)
0 diff
(100 %id)
BM788133.
matches multiple genes
Ascites, stomach .d 40 to 519 1 to 480 exact AAA also hits gene sukama 480/480
(100 %)
0 diff
(100 %id)
BM773282.
matches multiple genes
Ascites, stomach .d 40 to 513 1 to 474 exact   also hits gene sukama 474/474
(100 %)
0 diff
(100 %id)
BM760276.
matches multiple genes
lymph node, stomach .d 40 to 513 1 to 474 exact   also hits gene sukama 474/474
(100 %)
0 diff
(100 %id)
BM841260.
matches multiple genes
lymph node, stomach .d 40 to 516 1 to 477 exact AAA also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
BM772297.
matches multiple genes
myeloma .d 40 to 512 1 to 473 exact   also hits gene sukama 473/473
(100 %)
0 diff
(100 %id)
BM766970.
matches multiple genes
stomach .d 40 to 510 9 to 479 exact   also hits gene sukama 471/471
(100 %)
0 diff
(100 %id)
DA502255.
matches multiple genes
brain .d 41 to 519 2 to 480 exact capped also hits gene sukama 479/479
(100 %)
0 diff
(100 %id)
BM841177.
matches multiple genes
myeloma .d 41 to 516 1 to 476 exact AAA also hits gene sukama 476/476
(100 %)
0 diff
(100 %id)
DB103543.
matches multiple genes
thymus .d 41 to 519 2 to 480 exact capped, AAA also hits gene sukama 479/479
(100 %)
0 diff
(100 %id)
DB149026.
matches multiple genes
thymus .d 41 to 516 2 to 477 exact capped also hits gene sukama 476/476
(100 %)
0 diff
(100 %id)
DB154376.
matches multiple genes
thymus .d 41 to 519 2 to 480 exact capped, AAA also hits gene sukama 479/479
(100 %)
0 diff
(100 %id)
DB270190.
matches multiple genes
uterus .d 41 to 517 2 to 478 exact capped also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
AK026570.
matches multiple genes
  .d 42 to 516 154 to 628 exact tiling clone, available from FLJ, AAA also hits gene sukama 475/524
(90 %)
6 diff
(98.9 %id)
CB155166.
matches multiple genes
brain .d 42 to 519 1 to 478 exact AAA also hits gene sukama 478/478
(100 %)
0 diff
(100 %id)
BM740689.
matches multiple genes
Ascites, stomach .d 42 to 519 1 to 478 exact AAA also hits gene sukama 478/478
(100 %)
0 diff
(100 %id)
BM788251.
matches multiple genes
Ascites, stomach .d 42 to 518 1 to 477 exact   also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
BM759105.
matches multiple genes
lymph node, stomach .d 42 to 512 1 to 471 exact   also hits gene sukama 471/471
(100 %)
0 diff
(100 %id)
BM761843.
matches multiple genes
lymph node, stomach .d 42 to 519 1 to 478 exact AAA also hits gene sukama 478/478
(100 %)
0 diff
(100 %id)
DB498881.
matches multiple genes
hypothalamus .d 43 to 517 1 to 475 exact   also hits gene sukama 475/475
(100 %)
0 diff
(100 %id)
BM841024.
matches multiple genes
lymph node, stomach .d 43 to 515 1 to 473 exact   also hits gene sukama 473/473
(100 %)
0 diff
(100 %id)
BM841504.
matches multiple genes
lymph node, stomach .d 43 to 515 1 to 473 exact   also hits gene sukama 473/473
(100 %)
0 diff
(100 %id)
BQ683592.
matches multiple genes
melanotic melanoma, cell line, skin .d 44 to 520 1 to 477 exact AAA also hits gene sukama 477/477
(100 %)
0 diff
(100 %id)
BU930906.
matches multiple genes
ovary, teratocarcinoma, cell line .d 44 to 516 1 to 473 exact AAA also hits gene sukama 473/473
(100 %)
0 diff
(100 %id)
AW160429.
matches multiple genes
brain, frontal lobe .d 48 to 519 1 to 472 exact AAA also hits gene sukama 472/472
(100 %)
0 diff
(100 %id)
AW163296.
matches multiple genes
brain, frontal lobe .d 48 to 476 1 to 429 exact   also hits gene RPS17P16, sukama 429/429
(100 %)
0 diff
(100 %id)
BC071928.
matches multiple genes
Pancreas, epithelioid carcinoma .d 49 to 518 1 to 470 exact available from MGC, AAA also hits gene sukama 470/470
(100 %)
0 diff
(100 %id)
AI688985.
matches multiple genes
serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 49 to 516 468 to 1 exact   also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
CR978900.
matches multiple genes
T-Lymphocytes .d 49 to 516 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BM551200.
matches multiple genes
amelanotic melanoma, cell line, skin .d 50 to 520 1 to 471 exact AAA also hits gene sukama 471/471
(100 %)
0 diff
(100 %id)
BU160699.
matches multiple genes
melanotic melanoma, skin .d 50 to 519 1 to 470 exact AAA also hits gene sukama 470/470
(100 %)
0 diff
(100 %id)
BM911798.
matches multiple genes
amelanotic melanoma, cell line, skin .d 51 to 518 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BQ069053.
matches multiple genes
brain, neuroblastoma, cell line .d 51 to 516 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
CF128718.
matches multiple genes
Chondrosarcoma Lung Metastasis cell lines, lung .d 51 to 516 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
CN352400.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
CN484678.
matches multiple genes
eye .d 52 to 516 1 to 465 exact   also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
CN484802.
matches multiple genes
eye .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BF205868.
matches multiple genes
muscle, rhabdomyosarcoma .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BF664393.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BF976176.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BF795910.
matches multiple genes
lymph, lymphoma, cell line .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG114990.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG119329.
matches multiple genes
adenocarcinoma, cell line, Liver .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG164256.
matches multiple genes
hypernephroma, cell line, Kidney .d 52 to 519 1 to 468 V124X AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG285654.
matches multiple genes
bladder, transitional cell papilloma, cell line .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG283491.
matches multiple genes
adenocarcinoma, cell line, Prostate .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG281205.
matches multiple genes
melanotic melanoma, skin .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG248398.
matches multiple genes
adenocarcinoma cell line, colon .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG331698.
matches multiple genes
large cell carcinoma, lung .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG422230.
matches multiple genes
Kidney, renal cell adenocarcinoma .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG437682.
matches multiple genes
large cell carcinoma, lung .d 52 to 520 1 to 469 exact AAA also hits gene sukama 469/469
(100 %)
0 diff
(100 %id)
BG489554.
matches multiple genes
large cell carcinoma, lung .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG489964.
matches multiple genes
large cell carcinoma, lung .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG490110.
matches multiple genes
large cell carcinoma, lung .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG477805.
matches multiple genes
melanotic melanoma, skin .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG478350.
matches multiple genes
melanotic melanoma, skin .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG478307.
matches multiple genes
melanotic melanoma, skin .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG478391.
matches multiple genes
melanotic melanoma, skin .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG686856.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG685995.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG760610.
matches multiple genes
melanotic melanoma, high MDR (cell line), skin .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG754334.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 520 1 to 469 exact AAA also hits gene sukama 469/469
(100 %)
0 diff
(100 %id)
BG758081.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG756255.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 520 1 to 469 exact AAA also hits gene sukama 469/469
(100 %)
0 diff
(100 %id)
BG756563.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG755484.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 520 1 to 469 exact AAA also hits gene sukama 469/469
(100 %)
0 diff
(100 %id)
BG755337.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 520 1 to 469 exact AAA also hits gene sukama 469/469
(100 %)
0 diff
(100 %id)
BG757919.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG757998.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BG767794.
matches multiple genes
melanotic melanoma, high MDR (cell line), skin .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG769006.
matches multiple genes
melanotic melanoma, high MDR (cell line), skin .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BG827275.
matches multiple genes
muscle, rhabdomyosarcoma .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BM012797.
matches multiple genes
brain, neuroblastoma, cell line .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
CR991626.
matches multiple genes
T-Lymphocytes .d 52 to 517 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
CT003699.
matches multiple genes
T-Lymphocytes .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
CR986037.
matches multiple genes
T-Lymphocytes .d 52 to 522 1 to 471 exact AAA also hits gene sukama 471/471
(100 %)
0 diff
(100 %id)
CR990323.
matches multiple genes
T-Lymphocytes .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
CR996616.
matches multiple genes
T-Lymphocytes .d 52 to 516 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
CR987554.
matches multiple genes
T-Lymphocytes .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
CT002120.
matches multiple genes
T-Lymphocytes .d 52 to 518 1 to 467 exact AAA also hits gene sukama 467/467
(100 %)
0 diff
(100 %id)
CR985444.
matches multiple genes
T-Lymphocytes .d 52 to 519 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BM853852.
matches multiple genes
Ascites, stomach .d 52 to 516 1 to 465 exact   also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
F21567.
matches multiple genes
pectoral muscle (after mastectomy) .d 53 to 517 1 to 465 exact   also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BC020453.
matches multiple genes
Placenta, choriocarcinoma .d 53 to 516 1 to 464 exact available from MGC, AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
BG106827.
matches multiple genes
lymph, lymphoma, cell line .d 53 to 519 1 to 467 exact AAA also hits gene sukama 467/467
(100 %)
0 diff
(100 %id)
BG291467.
matches multiple genes
bladder, transitional cell papilloma, cell line .d 53 to 516 1 to 464 exact AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
BG824782.
matches multiple genes
adenocarcinoma cell line, colon .d 53 to 516 1 to 464 exact AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
BM015885.
matches multiple genes
breast, mammary adenocarcinoma, cell line .d 53 to 520 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BM008913.
matches multiple genes
adenocarcinoma, Pancreas .d 53 to 519 1 to 467 exact AAA also hits gene sukama 467/467
(100 %)
0 diff
(100 %id)
BQ961732.
matches multiple genes
epithelioid carcinoma cell line, Pancreas .d 53 to 519 1 to 467 exact AAA also hits gene sukama 467/467
(100 %)
0 diff
(100 %id)
BQ939626.
matches multiple genes
large cell carcinoma, lung .d 53 to 519 9 to 475 exact AAA also hits gene sukama 467/475
(98 %)
6 diff
(98.8 %id)
CV810550.
matches multiple genes
Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .d 53 to 516 1 to 464 exact AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
CN352437.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BM424194.
matches multiple genes
amelanotic melanoma, cell line, skin .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BM801762.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .d 54 to 517 1 to 464 exact AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
BM907968.
matches multiple genes
large cell carcinoma, lung .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BQ051596.
matches multiple genes
blood, natural killer cells, cell line .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BU175826.
matches multiple genes
large cell carcinoma, lung .d 54 to 521 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
BQ421161.
matches multiple genes
large cell carcinoma, lung .d 54 to 516 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BQ219934.
matches multiple genes
epithelioid carcinoma, Pancreas .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BQ436185.
matches multiple genes
large cell carcinoma, lung .d 54 to 520 1 to 467 exact AAA also hits gene sukama 467/467
(100 %)
0 diff
(100 %id)
BQ425599.
matches multiple genes
melanotic melanoma, skin .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BQ880115.
matches multiple genes
epidermoid carcinoma, cell line, salivary gland .d 54 to 516 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BQ675511.
matches multiple genes
epidermoid carcinoma, cell line, salivary gland .d 54 to 516 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BQ653023.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BQ959691.
matches multiple genes
leiomyosarcoma, uterus .d 54 to 519 1 to 466 exact AAA also hits gene sukama 466/466
(100 %)
0 diff
(100 %id)
BF727297.
matches multiple genes
eye, lens .d 55 to 519 1 to 465 exact AAA also hits gene sukama 465/465
(100 %)
0 diff
(100 %id)
BF980991.
matches multiple genes
duodenal adenocarcinoma, cell line, small intestine .d 55 to 516 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
EL950560.
matches multiple genes
eyeball .d 56 to 519 4 to 467 exact AAA also hits gene sukama 464/467
(99 %)
0 diff
(100 %id)
EL952786.
matches multiple genes
eyeball .d 56 to 516 4 to 464 exact AAA also hits gene sukama 461/464
(99 %)
0 diff
(100 %id)
BU165544.
matches multiple genes
eye, retinoblastoma .d 56 to 519 1 to 464 exact AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
CN352444.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CN352470.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CA389959.
matches multiple genes
eye, RPE/choroid .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
AI499430.
matches multiple genes
moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .d 57 to 516 460 to 1 exact   also hits gene sukama 460/460
(100 %)
0 diff
(100 %id)
BF794220.
matches multiple genes
lymph, lymphoma, cell line .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BI333948.
matches multiple genes
cervical carcinoma cell line, cervix .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BQ440363.
matches multiple genes
melanotic melanoma, skin .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BU177959.
matches multiple genes
melanotic melanoma, skin .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CF129969.
matches multiple genes
Chondrosarcoma Lung Metastasis cell lines, lung .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CR983506.
matches multiple genes
T-Lymphocytes .d 57 to 520 1 to 464 exact AAA also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
CR988467.
matches multiple genes
T-Lymphocytes .d 57 to 519 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BM853425.
matches multiple genes
Ascites, stomach .d 57 to 519 1 to 463 exact   also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CN352413.
matches multiple genes
embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
CD675171.
matches multiple genes
eye, lens .d 58 to 518 1 to 461 exact   also hits gene sukama 461/461
(100 %)
0 diff
(100 %id)
BE018962.
matches multiple genes
Kidney, renal cell adenocarcinoma .d 58 to 493 1 to 436 V124X fully sequenced, also hits gene sukama 436/436
(100 %)
0 diff
(100 %id)
BF663531.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BF569709.
matches multiple genes
Kidney, renal carcinoma (ascites) .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BF971774.
matches multiple genes
leiomyosarcoma cell line, uterus .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG024742.
matches multiple genes
lymph, lymphoma, cell line .d 58 to 520 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
BG490890.
matches multiple genes
large cell carcinoma, lung .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG684735.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG685640.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG752925.
matches multiple genes
eye, normal pigmented retinal epithelium .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG753758.
matches multiple genes
eye, normal pigmented retinal epithelium .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG829894.
matches multiple genes
epithelioid carcinoma cell line, Pancreas .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG829929.
matches multiple genes
epithelioid carcinoma cell line, Pancreas .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BG831891.
matches multiple genes
epithelioid carcinoma cell line, Pancreas .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BI254651.
matches multiple genes
cervical carcinoma cell line, cervix .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
BU164064.
matches multiple genes
large cell carcinoma, lung .d 58 to 520 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CR991110.
matches multiple genes
T-Lymphocytes .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
CR994776.
matches multiple genes
T-Lymphocytes .d 58 to 519 1 to 462 exact AAA also hits gene sukama 462/462
(100 %)
0 diff
(100 %id)
CR996677.
matches multiple genes
T-Lymphocytes .d 58 to 520 1 to 463 exact AAA also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
AA303775 aorta .d 59 to 300 1 to 242       242/242
(100 %)
0 diff
(100 %id)
AA339981 epithelium, skin .d 59 to 373 1 to 315       315/315
(100 %)
0 diff
(100 %id)
ES313961 beard hair, skin .d 59 to 516 1 to 458 exact     458/458
(100 %)
0 diff
(100 %id)
BM700111.
matches multiple genes
eye, lens .d 59 to 519 1 to 461 K129X fully sequenced, also hits gene sukama 461/461
(100 %)
0 diff
(100 %id)
AA301936 aorta .d 60 to 303 1 to 244       244/244
(100 %)
0 diff
(100 %id)
EL948663 eyeball .d 60 to 519 4 to 463 exact AAA   460/463
(99 %)
0 diff
(100 %id)
BE206674.
matches multiple genes
Kidney, renal cell adenocarcinoma .d 188 to 517 332 to 3   fully sequenced, also hits gene sukama 330/332
(99 %)
0 diff
(100 %id)
BU737909.
matches multiple genes
eye, lens .d 188 to 519 350 to 19   fully sequenced, AAA also hits gene sukama 332/332
(100 %)
0 diff
(100 %id)
BJ989913.
matches multiple genes
hepatoblastoma .d 294 to 494 201 to 1   fully sequenced, also hits gene sukama 201/201
(100 %)
0 diff
(100 %id)
DR731341.
matches multiple genes
pooled .e 1 to 312 1 to 312 exact tiling clone, also hits gene sukama 312/313
(99 %)
1 diff
(99.7 %id)
EC481217.
matches multiple genes
Prostate .e 30 to 121 1 to 92     also hits gene sukama 92/92
(100 %)
1 diff
(99.0 %id)
EC489964.
matches multiple genes
Prostate .e 30 to 121 1 to 92     also hits gene sukama 92/92
(100 %)
1 diff
(99.0 %id)
EC542769.
matches multiple genes
Prostate .e 44 to 139 1 to 96     also hits gene sukama 96/96
(100 %)
0 diff
(100 %id)
EC500817.
matches multiple genes
Prostate .e 46 to 129 1 to 85     also hits gene sukama 85/85
(100 %)
1 diff
(98.9 %id)
EC446504.
matches multiple genes
Prostate .e 49 to 136 1 to 88     also hits gene sukama 88/89
(98 %)
2 diff
(97.8 %id)
EC557863.
matches multiple genes
Prostate .e 81 to 171 1 to 91     also hits gene sukama 91/91
(100 %)
4 diff
(95.7 %id)
F35128.
matches multiple genes
pectoral muscle (after mastectomy) .e 86 to 200 1 to 116     also hits gene sukama 116/116
(100 %)
0 diff
(100 %id)
EC484854.
matches multiple genes
Prostate .e 103 to 198 1 to 96     also hits gene sukama 96/97
(98 %)
1 diff
(99.0 %id)
EC544139.
matches multiple genes
Prostate .e 103 to 200 1 to 101     also hits gene sukama 101/101
(100 %)
3 diff
(97.1 %id)
AV752729.
matches multiple genes
Pituitary .f 1 to 511 1 to 506 S33F K92R T93L P94G R95D ... tiling clone, also hits gene sukama 506/516
(98 %)
6 diff
(98.9 %id)
BG542472.
matches multiple genes
lung .g 1 to 730 1 to 729   tiling clone, also hits gene sukama 729/729
(100 %)
13 diff
(98.3 %id)
DA660424.
matches multiple genes
  .g 3 to 581 2 to 580   capped also hits gene sukama 579/579
(100 %)
1 diff
(99.9 %id)
DB191830.
matches multiple genes
ovary, tumor tissue .g 3 to 556 2 to 555   capped also hits gene sukama 554/554
(100 %)
0 diff
(100 %id)
DA930337.
matches multiple genes
small intestine .g 5 to 584 2 to 581   capped also hits gene sukama 580/580
(100 %)
1 diff
(99.9 %id)
DB102111.
matches multiple genes
thymus .g 8 to 558 2 to 552 I16V capped also hits gene sukama 551/551
(100 %)
2 diff
(99.7 %id)
BP313777.
matches multiple genes
mammary gland .g 16 to 598 1 to 584 E18V Y20V Y21L T22H R23A ...   also hits gene sukama 584/584
(100 %)
5 diff
(99.2 %id)
DA733385.
matches multiple genes
  .g 181 to 629 2 to 450   capped also hits gene sukama 449/449
(100 %)
1 diff
(99.8 %id)
BG335357.
matches multiple genes
choriocarcinoma, placenta .g 200 to 932 1 to 726     also hits gene sukama 726/1049
(69 %)
29 diff
(97.3 %id)
BE731466.
matches multiple genes
choriocarcinoma, placenta .g 222 to 983 1 to 759     also hits gene sukama 759/768
(98 %)
9 diff
(98.9 %id)
BE732176.
matches multiple genes
choriocarcinoma, placenta .g 222 to 1029 1 to 795     also hits gene sukama 795/798
(99 %)
25 diff
(96.9 %id)
DA039646.
matches multiple genes
bladder .g 477 to 1024 2 to 551   capped also hits gene sukama 550/550
(100 %)
2 diff
(99.7 %id)
AW377002.
matches multiple genes
colon .g 519 to 1024 1 to 506     also hits gene sukama 506/506
(100 %)
2 diff
(99.7 %id)
DB245958.
matches multiple genes
uterus, tumor tissue .g 526 to 1089 2 to 565   tiling clone, capped also hits gene sukama 564/564
(100 %)
0 diff
(100 %id)
AW850714.
matches multiple genes
colon .g 531 to 1070 1 to 540     also hits gene sukama 540/540
(100 %)
0 diff
(100 %id)
AW850726.
matches multiple genes
colon .g 531 to 1057 1 to 527     also hits gene sukama 527/527
(100 %)
1 diff
(99.9 %id)
BG569794.
matches multiple genes
lung .g 716 to 1589 1 to 871   tiling clone, also hits gene sukama 871/881
(98 %)
23 diff
(97.4 %id)
DB365302.
matches multiple genes
  .g 1862 to 2410 547 to 1   tiling clone, also hits gene sukama 547/563
(97 %)
16 diff
(97.2 %id)
CB150785.
matches multiple genes
cervix, Uterine .h 1 to 412 1 to 413   tiling clone, also hits gene sukama 413/413
(100 %)
2 diff
(99.6 %id)
BG709587.
matches multiple genes
brain, hypothalamus .h 3 to 777 1 to 773 E22D L34W D35I Q36R E37R ... AAA also hits gene sukama 773/773
(100 %)
16 diff
(98.0 %id)
BI597659.
matches multiple genes
brain, hypothalamus .h 3 to 777 1 to 778 exact   also hits gene sukama 778/808
(96 %)
15 diff
(98.2 %id)
DA310472.
matches multiple genes
hippocampus .h 4 to 578 2 to 576   capped also hits gene sukama 575/575
(100 %)
0 diff
(100 %id)
CD385291.
matches multiple genes
embryonic trophoblasts, made from WA01 stemcells .h 4 to 781 23 to 800 V78A   also hits gene sukama 778/928
(83 %)
13 diff
(98.6 %id)
DA484464.
matches multiple genes
brain .h 6 to 525 2 to 521   capped also hits gene sukama 520/520
(100 %)
0 diff
(100 %id)
DA261344.
matches multiple genes
caudate nucleus .h 7 to 561 2 to 556   capped also hits gene sukama 555/555
(100 %)
0 diff
(100 %id)
TI_45213419.
matches multiple genes
  .h 8 to 777 117 to 889 exact   also hits gene sukama 773/967
(79 %)
16 diff
(98.4 %id)
DA726072.
matches multiple genes
  .h 9 to 573 2 to 567   capped also hits gene sukama 566/566
(100 %)
1 diff
(99.9 %id)
DA914992.
matches multiple genes
  .h 9 to 548 2 to 541   capped also hits gene sukama 540/540
(100 %)
1 diff
(99.9 %id)
DA921402.
matches multiple genes
small intestine .h 9 to 571 2 to 564   capped also hits gene sukama 563/563
(100 %)
1 diff
(99.9 %id)
DA950146.
matches multiple genes
Spleen .h 9 to 571 2 to 565   capped also hits gene sukama 564/564
(100 %)
3 diff
(99.5 %id)
BM005961.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 19 to 726 1 to 709     also hits gene sukama 711/709
(100 %)
6 diff
(99.2 %id)
BU074695.
matches multiple genes
Pancreas, Purified pancreatic islet .h 19 to 664 1 to 646     also hits gene sukama 646/646
(100 %)
3 diff
(99.6 %id)
CR618357.
matches multiple genes
Neuroblastoma Cot 10-normalized .h 20 to 778 1 to 759 exact tiling clone, also hits gene sukama 759/759
(100 %)
0 diff
(100 %id)
AL521076.
matches multiple genes
brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .h 20 to 778 1 to 756 exact   also hits gene sukama 756/756
(100 %)
3 diff
(99.7 %id)
BX391081.
matches multiple genes
Neuroblastoma Cot 10-normalized .h 20 to 743 722 to 1 I12F   also hits gene sukama 722/722
(100 %)
9 diff
(98.8 %id)
BX391082.
matches multiple genes
Neuroblastoma Cot 10-normalized .h 20 to 778 1 to 758 L57X   also hits gene sukama 758/758
(100 %)
5 diff
(99.4 %id)
BX391083.
matches multiple genes
Neuroblastoma Cot 10-normalized .h 20 to 772 1 to 752 F71L K72X   also hits gene sukama 752/752
(100 %)
2 diff
(99.8 %id)
TI_59385910.
matches multiple genes
  .h 20 to 726 60 to 767     also hits gene sukama 710/708
(100 %)
5 diff
(99.3 %id)
BG771886.
matches multiple genes
testis .h 21 to 776 1 to 755 exact   also hits gene sukama 755/755
(100 %)
6 diff
(99.3 %id)
BM928525.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 777 1 to 757 exact AAA also hits gene sukama 757/757
(100 %)
4 diff
(99.5 %id)
BQ064652.
matches multiple genes
lymph, lymphoma, cell line .h 21 to 777 1 to 756 exact AAA also hits gene sukama 756/756
(100 %)
2 diff
(99.8 %id)
BQ653100.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 777 1 to 757 exact AAA also hits gene sukama 757/757
(100 %)
1 diff
(99.9 %id)
BQ653006.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 777 1 to 757 exact AAA also hits gene sukama 757/757
(100 %)
3 diff
(99.7 %id)
BQ652132.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 742 1 to 723 E19G E22X V31G K46N E47G ...   also hits gene sukama 723/943
(76 %)
27 diff
(97.2 %id)
BQ651033.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 739 1 to 730 I38D I39Y E40*   also hits gene sukama 730/891
(81 %)
19 diff
(97.9 %id)
BQ654228.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 777 1 to 758 G68W M69D N70E K72Q T73N ... tiling clone, AAA also hits gene sukama 758/758
(100 %)
2 diff
(99.8 %id)
BQ888283.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 777 1 to 757 exact AAA also hits gene sukama 757/757
(100 %)
3 diff
(99.7 %id)
BU149269.
matches multiple genes
hepatocellular carcinoma, cell line, Liver .h 21 to 655 1 to 637     also hits gene sukama 637/1051
(60 %)
9 diff
(99.2 %id)
BQ933150.
matches multiple genes
large cell carcinoma, lung .h 21 to 781 1 to 761 P77T AAA also hits gene sukama 761/761
(100 %)
4 diff
(99.5 %id)
BG425089.
matches multiple genes
Kidney, renal cell adenocarcinoma .h 23 to 689 1 to 667   AAA also hits gene sukama 667/759
(87 %)
3 diff
(99.7 %id)
BF310442.
matches multiple genes
brain, neuroblastoma .h 24 to 721 1 to 694     also hits gene sukama 696/900
(77 %)
8 diff
(99.2 %id)
BG425162.
matches multiple genes
Kidney, renal cell adenocarcinoma .h 24 to 774 1 to 745 D35G Q36S E37G I38D I39Y ... AAA also hits gene sukama 745/745
(100 %)
16 diff
(97.9 %id)
N35559.
matches multiple genes
melanocyte .h 25 to 431 1 to 404     also hits gene sukama 404/404
(100 %)
6 diff
(98.6 %id)
BI196669.
matches multiple genes
brain, neuroblastoma .h 25 to 705 1 to 686     also hits gene sukama 686/686
(100 %)
7 diff
(99.0 %id)
BM475283.
matches multiple genes
eye, retinoblastoma .h 25 to 739 13 to 739 E30*   also hits gene sukama 724/1128
(64 %)
26 diff
(97.7 %id)
BQ228784.
matches multiple genes
embryonal carcinoma, cell line, testis .h 26 to 777 1 to 753 M69D N70E K72Q T73N P74A ... AAA also hits gene sukama 753/753
(100 %)
4 diff
(99.5 %id)
BU594496.
matches multiple genes
mixed (pool of 40 RNAs) .h 26 to 739 1 to 721 L52F D53G F54L G55R S56E ...   also hits gene sukama 721/886
(81 %)
16 diff
(98.2 %id)
BQ957646.
matches multiple genes
large cell carcinoma, lung .h 28 to 777 1 to 750 exact AAA also hits gene sukama 750/750
(100 %)
6 diff
(99.2 %id)
BM745059.
matches multiple genes
Ascites, stomach .h 28 to 638 1 to 611     also hits gene sukama 611/611
(100 %)
1 diff
(99.9 %id)
BM788186.
matches multiple genes
Ascites, stomach .h 28 to 644 1 to 618     also hits gene sukama 618/618
(100 %)
1 diff
(99.9 %id)
DB454097.
matches multiple genes
testis .h 29 to 490 1 to 462     also hits gene sukama 462/476
(97 %)
11 diff
(97.7 %id)
BU956995.
matches multiple genes
adenocarcinoma, cell line, breast .h 30 to 739 1 to 710 L60P Q61S F71S   also hits gene sukama 710/924
(76 %)
8 diff
(99.2 %id)
BU188798 melanotic melanoma, cell line, skin .h 38 to 780 11 to 753 exact AAA   743/753
(98 %)
5 diff
(99.4 %id)
CN292560.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .h 39 to 159 1 to 121     also hits gene sukama 121/121
(100 %)
1 diff
(99.2 %id)
BE901350.
matches multiple genes
choriocarcinoma, placenta .h 39 to 658 1 to 618     also hits gene sukama 618/618
(100 %)
5 diff
(99.2 %id)
BP870711.
matches multiple genes
embryonal kidney .h 41 to 372 1 to 332     also hits gene sukama 332/332
(100 %)
2 diff
(99.4 %id)
CN352363.
matches multiple genes
embryonic stem cells, DMSO-treated H9 cellline .h 41 to 699 1 to 659     also hits gene sukama 659/663
(99 %)
4 diff
(99.4 %id)
DB495148.
matches multiple genes
hypothalamus .h 41 to 530 1 to 490     also hits gene sukama 490/490
(100 %)
0 diff
(100 %id)
BE732477.
matches multiple genes
choriocarcinoma, placenta .h 42 to 765 1 to 723 L52W D53T F54S G55A S56R ...   also hits gene sukama 725/723
(100 %)
7 diff
(99.1 %id)
BE879788.
matches multiple genes
large cell carcinoma, undifferentiated, lung .h 45 to 431 1 to 387     also hits gene sukama 387/388
(99 %)
1 diff
(99.8 %id)
BU539861.
matches multiple genes
adenocarcinoma, cell line, breast .h 46 to 780 1 to 735 exact AAA also hits gene sukama 735/735
(100 %)
1 diff
(99.9 %id)
CA455386.
matches multiple genes
adenocarcinoma, cell line, breast .h 46 to 677 1 to 632     also hits gene sukama 632/752
(84 %)
6 diff
(99.3 %id)
BE263126.
matches multiple genes
brain, neuroblastoma .h 47 to 777 1 to 730 exact   also hits gene sukama 730/730
(100 %)
3 diff
(99.6 %id)
BE894388.
matches multiple genes
melanotic melanoma, skin .h 48 to 777 1 to 727 Y27H L52W D53T F54S G55A ... AAA also hits gene sukama 729/727
(100 %)
14 diff
(98.1 %id)
BQ943733.
matches multiple genes
large cell carcinoma, lung .h 48 to 777 19 to 747 V67G G68W M69D N70E K72Q ... AAA also hits gene sukama 729/747
(97 %)
11 diff
(98.6 %id)
BG684851.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .h 49 to 777 1 to 734 I39L E40D   also hits gene sukama 734/833
(88 %)
11 diff
(98.7 %id)
BG685897.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .h 49 to 725 1 to 685     also hits gene sukama 683/847
(80 %)
25 diff
(97.1 %id)
BG755975.
matches multiple genes
B-cells, primary B-cells from tonsils (cell line) .h 49 to 780 1 to 736 E22R R23Q R24E D25R N26Q ...   also hits gene sukama 736/919
(80 %)
11 diff
(98.9 %id)
AA186772.
matches multiple genes
  .h 53 to 171 1 to 117     also hits gene sukama 117/117
(100 %)
4 diff
(96.6 %id)
BE392694.
matches multiple genes
endometrium, adenocarcinoma cell line, uterus .h 66 to 715 1 to 648     also hits gene sukama 648/648
(100 %)
2 diff
(99.7 %id)
BE731234.
matches multiple genes
choriocarcinoma, placenta .h 69 to 774 1 to 707 exact   also hits gene sukama 707/707
(100 %)
2 diff
(99.8 %id)
BM557642.
matches multiple genes
amelanotic melanoma, cell line, skin .h 69 to 780 1 to 713 exact AAA also hits gene sukama 713/713
(100 %)
3 diff
(99.6 %id)
BM553165.
matches multiple genes
amelanotic melanoma, cell line, skin .h 69 to 780 1 to 712 exact AAA also hits gene sukama 712/712
(100 %)
1 diff
(99.9 %id)
BM550811.
matches multiple genes
amelanotic melanoma, cell line, skin .h 69 to 780 1 to 712 exact AAA also hits gene sukama 712/712
(100 %)
1 diff
(99.9 %id)
BM559597.
matches multiple genes
amelanotic melanoma, cell line, skin .h 69 to 780 1 to 712 exact AAA also hits gene sukama 712/712
(100 %)
1 diff
(99.9 %id)
BM562048.
matches multiple genes
amelanotic melanoma, cell line, skin .h 69 to 780 1 to 714 I12Y S13L I14H K15Q L16A ... AAA also hits gene sukama 714/714
(100 %)
6 diff
(99.2 %id)
CB111704.
matches multiple genes
Liver .h 69 to 667 1 to 599     also hits gene sukama 599/599
(100 %)
0 diff
(100 %id)
BM807851.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 781 1 to 712 exact AAA also hits gene sukama 712/712
(100 %)
4 diff
(99.5 %id)
BM808057.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 780 1 to 712 I39N E40* AAA also hits gene sukama 712/712
(100 %)
2 diff
(99.8 %id)
BM810848.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 780 1 to 711 exact AAA also hits gene sukama 711/711
(100 %)
2 diff
(99.8 %id)
BM912067.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 772 1 to 703 Q61P V67G V78G   also hits gene sukama 703/1108
(63 %)
16 diff
(98.6 %id)
BM912937.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 551 1 to 483     also hits gene sukama 483/1299
(37 %)
15 diff
(98.9 %id)
BM916009.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 780 1 to 711 exact AAA also hits gene sukama 711/711
(100 %)
1 diff
(99.9 %id)
BM916633.
matches multiple genes
amelanotic melanoma, cell line, skin .h 70 to 781 1 to 714 N59Q R75P P77T V78C AAA also hits gene sukama 714/714
(100 %)
15 diff
(97.9 %id)
BI160162.
matches multiple genes
epithelioid carcinoma cell line, Pancreas .h 81 to 781 1 to 704 E22A N59K L60P Q61S V62G ...   also hits gene sukama 704/911
(77 %)
15 diff
(98.4 %id)
BE729559.
matches multiple genes
melanotic melanoma, skin .h 92 to 776 1 to 685 exact   also hits gene sukama 685/685
(100 %)
2 diff
(99.8 %id)
BE385936.
matches multiple genes
melanotic melanoma, skin .h 93 to 771 1 to 673 L34X D35G Q36S E37G I38D ...   also hits gene sukama 673/673
(100 %)
9 diff
(98.7 %id)
BI260776.
matches multiple genes
cervical carcinoma cell line, cervix .h 126 to 777 1 to 653 V41A D42R P43S D44* AAA also hits gene sukama 653/653
(100 %)
1 diff
(99.9 %id)
BM838458.
matches multiple genes
lymph node, stomach .h 180 to 350 1 to 170     also hits gene sukama 170/170
(100 %)
2 diff
(98.9 %id)
BE734969.
matches multiple genes
choriocarcinoma, placenta .h 198 to 774 1 to 567 R23Q R24E D25R N26Q Y27L ... AAA also hits gene sukama 567/567
(100 %)
13 diff
(97.8 %id)
BM807363 amelanotic melanoma, cell line, skin .h 229 to 780 1 to 552 exact AAA   552/552
(100 %)
7 diff
(98.8 %id)
BM811365.
matches multiple genes
amelanotic melanoma, cell line, skin .h 233 to 780 19 to 565 exact AAA also hits gene sukama 547/565
(96 %)
8 diff
(98.6 %id)
BM808588.
matches multiple genes
amelanotic melanoma, cell line, skin .h 233 to 780 28 to 574 exact AAA also hits gene sukama 547/574
(95 %)
7 diff
(98.8 %id)
BM554357.
matches multiple genes
amelanotic melanoma, cell line, skin .h 234 to 780 15 to 558 exact AAA also hits gene sukama 544/558
(97 %)
7 diff
(98.8 %id)
BG491542.
matches multiple genes
amelanotic melanoma, cell line, skin .h 236 to 780 1 to 544 exact AAA also hits gene sukama 544/544
(100 %)
3 diff
(99.5 %id)
BM556582.
matches multiple genes
amelanotic melanoma, cell line, skin .h 237 to 780 1 to 543 exact AAA also hits gene sukama 543/543
(100 %)
2 diff
(99.7 %id)
BM555152.
matches multiple genes
amelanotic melanoma, cell line, skin .h 237 to 780 1 to 544 exact AAA also hits gene sukama 544/544
(100 %)
2 diff
(99.7 %id)
BM554422.
matches multiple genes
amelanotic melanoma, cell line, skin .h 237 to 780 1 to 542 exact AAA also hits gene sukama 542/542
(100 %)
3 diff
(99.5 %id)
BM558592.
matches multiple genes
amelanotic melanoma, cell line, skin .h 237 to 780 1 to 543 exact AAA also hits gene sukama 543/543
(100 %)
2 diff
(99.7 %id)
BM915031.
matches multiple genes
amelanotic melanoma, cell line, skin .h 237 to 780 20 to 561 exact AAA also hits gene sukama 542/561
(96 %)
7 diff
(98.8 %id)
BM811448.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 542 exact AAA also hits gene sukama 542/542
(100 %)
2 diff
(99.7 %id)
BM810134.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 543 exact AAA also hits gene sukama 543/543
(100 %)
1 diff
(99.9 %id)
BM810139.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 542 exact AAA also hits gene sukama 542/542
(100 %)
2 diff
(99.7 %id)
BM810187.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 542 Q17H V41I S56R V78D AAA also hits gene sukama 542/542
(100 %)
9 diff
(98.4 %id)
BM808020.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 543 exact AAA also hits gene sukama 543/543
(100 %)
1 diff
(99.9 %id)
BM912795.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 542 exact AAA also hits gene sukama 542/542
(100 %)
2 diff
(99.7 %id)
BM913310.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 542 exact AAA also hits gene sukama 542/542
(100 %)
2 diff
(99.7 %id)
BM560825.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 541 exact AAA also hits gene sukama 541/541
(100 %)
4 diff
(99.3 %id)
BM915412.
matches multiple genes
amelanotic melanoma, cell line, skin .h 238 to 780 1 to 542 exact AAA also hits gene sukama 542/542
(100 %)
2 diff
(99.7 %id)
AI608900.
matches multiple genes
normal gingiva (cell line from primarykeratinocytes) .h 257 to 778 522 to 1 exact   also hits gene sukama 522/522
(100 %)
1 diff
(99.9 %id)
DB519536.
matches multiple genes
testis .h 314 to 777 1 to 464 exact   Submitted on the opposite strand, also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
BI862080.
matches multiple genes
breast, mammary adenocarcinoma, cell line .h 314 to 781 1 to 468 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
TI_57192971.
matches multiple genes
  .h 314 to 781 50 to 517 exact AAA also hits gene sukama 468/468
(100 %)
0 diff
(100 %id)
DB566194.
matches multiple genes
hypothalamus .h 317 to 780 1 to 464 exact   Submitted on the opposite strand, also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
CR595559.
matches multiple genes
Neuroblastoma Cot 10-normalized .h 318 to 780 1 to 463 exact   also hits gene sukama 463/463
(100 %)
0 diff
(100 %id)
CR609691.
matches multiple genes
Neuroblastoma Cot 25-normalized .h 318 to 778 1 to 461 exact   also hits gene sukama 461/461
(100 %)
0 diff
(100 %id)
CR618328.
matches multiple genes
Neuroblastoma Cot 50-normalized .h 318 to 781 1 to 464 exact   also hits gene sukama 464/464
(100 %)
0 diff
(100 %id)
CR602312.
matches multiple genes
B cells (Ramos cell line) Cot 25-normalized .h 321 to 780 1 to 460 exact   also hits gene sukama 460/460
(100 %)
0 diff
(100 %id)
CR615408.
matches multiple genes
Neuroblastoma Cot 50-normalized .h 321 to 780 1 to 460 exact   also hits gene sukama 460/460
(100 %)
0 diff
(100 %id)
BU071649.
matches multiple genes
insulinoma, Pancreas .h 324 to 751 1 to 428 exact fully sequenced, also hits gene sukama 428/428
(100 %)
3 diff
(99.3 %id)
BU948497.
matches multiple genes
insulinoma, Pancreas .h 324 to 778 1 to 455 exact   also hits gene RPS17P16, sukama 455/455
(100 %)
3 diff
(99.4 %id)
CR620738.
matches multiple genes
HeLa cells Cot 25-normalized .h 327 to 778 1 to 452 exact   also hits gene sukama 452/452
(100 %)
0 diff
(100 %id)
AA301001 testis .h 330 to 576 1 to 247       247/247
(100 %)
0 diff
(100 %id)
AA327346 colon .h 330 to 549 1 to 220       220/220
(100 %)
0 diff
(100 %id)
AA372872 colon .h 330 to 576 1 to 247       247/247
(100 %)
0 diff
(100 %id)
BQ332445.
matches multiple genes
lung_tumor .h 330 to 505 176 to 2     also hits gene sukama 175/176
(99 %)
2 diff
(98.9 %id)
BE018313.
matches multiple genes
cervix .h 330 to 777 1 to 448 exact fully sequenced, also hits gene sukama 448/448
(100 %)
1 diff
(99.8 %id)
CK905079.
matches multiple genes
insulinoma, Pancreas .h 330 to 777 1 to 448 exact AAA also hits gene RPS17P16, sukama 448/448
(100 %)
4 diff
(99.2 %id)
BU787935.
matches multiple genes
insulinoma, Pancreas .h 330 to 756 1 to 427 exact   also hits gene RPS17P16, sukama 427/427
(100 %)
4 diff
(99.1 %id)
BU789392.
matches multiple genes
insulinoma, Pancreas .h 330 to 762 1 to 433 exact   also hits gene RPS17P16, sukama 433/433
(100 %)
4 diff
(99.1 %id)
BU789892.
matches multiple genes
insulinoma, Pancreas .h 330 to 762 1 to 433 exact   also hits gene RPS17P16, sukama 433/433
(100 %)
4 diff
(99.1 %id)
AA357036   .h 331 to 589 1 to 259       259/259
(100 %)
0 diff
(100 %id)
DB565228 hypothalamus .h 336 to 780 1 to 445 exact   Submitted on the opposite strand 445/445
(100 %)
0 diff
(100 %id)
BM888403 eye .h 338 to 567 1 to 230       230/230
(100 %)
0 diff
(100 %id)
F24193 pectoral muscle (after mastectomy) .h 339 to 576 1 to 238       238/238
(100 %)
0 diff
(100 %id)
F32131 pectoral muscle (after mastectomy) .h 342 to 651 1 to 311       311/311
(100 %)
0 diff
(100 %id)
F35607 pectoral muscle (after mastectomy) .h 364 to 651 1 to 288       288/288
(100 %)
0 diff
(100 %id)
F19463 pectoral muscle (after mastectomy) .h 368 to 604 1 to 237       237/237
(100 %)
0 diff
(100 %id)
BG993150.
matches multiple genes
head_neck .h 373 to 550 178 to 3     also hits gene sukama 176/178
(98 %)
2 diff
(98.9 %id)
AA159813.
matches multiple genes
  .h 376 to 768 1 to 394 exact fully sequenced, also hits gene sukama 394/394
(100 %)
1 diff
(99.8 %id)
AA083785.
matches multiple genes
  .h 377 to 778 1 to 401 exact fully sequenced, also hits gene sukama 401/401
(100 %)
1 diff
(99.8 %id)
N26506.
matches multiple genes
melanocyte .h 479 to 777 299 to 1 exact   also hits gene sukama 299/316
(94 %)
0 diff
(100 %id)
EB362835.
matches multiple genes
eye, lens .h 484 to 777 309 to 16 D25A A33P D44A AAA also hits gene sukama 294/297
(98 %)
8 diff
(97.4 %id)
BE301795.
matches multiple genes
cervix .h 555 to 778 224 to 1   fully sequenced, also hits gene sukama 224/224
(100 %)
0 diff
(100 %id)
BQ279030 adenocarcinoma, cell line, breast .h 560 to 777 1 to 218   AAA   218/218
(100 %)
0 diff
(100 %id)
D57108.
matches multiple genes
  .h 584 to 779 197 to 1     Submitted on the opposite strand, also hits gene sukama 197/225
(87 %)
5 diff
(97.8 %id)
EC452186.
matches multiple genes
Prostate .h 603 to 697 95 to 1     also hits gene sukama 95/95
(100 %)
0 diff
(100 %id)
EC582253.
matches multiple genes
Prostate .h 605 to 698 96 to 2     also hits gene sukama 95/96
(98 %)
1 diff
(99.0 %id)
EC582844.
matches multiple genes
Prostate .h 605 to 698 95 to 1     also hits gene sukama 95/95
(100 %)
1 diff
(99.0 %id)
BY998675.
matches multiple genes
  .h 619 to 778 1 to 160     Submitted on the opposite strand, also hits gene sukama 160/162
(98 %)
1 diff
(99.4 %id)
BY998965.
matches multiple genes
  .h 619 to 780 1 to 162     Submitted on the opposite strand, also hits gene sukama 162/165
(98 %)
1 diff
(99.4 %id)
BY998981.
matches multiple genes
  .h 619 to 776 1 to 158     Submitted on the opposite strand, also hits gene sukama 158/159
(99 %)
1 diff
(99.4 %id)
BY999001.
matches multiple genes
  .h 619 to 776 1 to 158     Submitted on the opposite strand, also hits gene sukama 158/159
(99 %)
1 diff
(99.4 %id)
BY999434.
matches multiple genes
  .h 619 to 780 1 to 162     Submitted on the opposite strand, also hits gene sukama 162/165
(98 %)
2 diff
(98.8 %id)
BY999482.
matches multiple genes
  .h 619 to 761 1 to 144     Submitted on the opposite strand, also hits gene sukama 144/145
(99 %)
2 diff
(98.7 %id)
AA112000.
matches multiple genes
  .h 621 to 777 157 to 1   fully sequenced, also hits gene sukama 157/157
(100 %)
0 diff
(100 %id)
AA159814.
matches multiple genes
  .h 621 to 780 160 to 1   fully sequenced, also hits gene sukama 160/160
(100 %)
0 diff
(100 %id)
BU071413.
matches multiple genes
insulinoma, Pancreas .h 621 to 756 136 to 1   fully sequenced, also hits gene sukama 136/136
(100 %)
0 diff
(100 %id)
AA876796.
matches multiple genes
metastatic prostate bone lesion .h 622 to 753 134 to 3     also hits gene sukama 132/134
(98 %)
0 diff
(100 %id)
CD389276.
matches multiple genes
embryonic trophoblasts, made from WA01 stemcells .h 651 to 778 22 to 152   AAA also hits gene sukama 131/152
(86 %)
6 diff
(96.1 %id)
EC563852.
matches multiple genes
Prostate .h 662 to 772 118 to 8     also hits gene sukama 111/118
(94 %)
0 diff
(100 %id)
EC564997.
matches multiple genes
Prostate .h 662 to 777 115 to 1     also hits gene sukama 115/115
(100 %)
1 diff
(99.2 %id)
EC451968.
matches multiple genes
Prostate .h 664 to 778 119 to 7     also hits gene sukama 113/119
(94 %)
0 diff
(100 %id)
EC469620.
matches multiple genes
Prostate .h 664 to 772 114 to 9     also hits gene sukama 106/114
(92 %)
3 diff
(97.4 %id)
EC469810.
matches multiple genes
Prostate .h 669 to 779 113 to 3     also hits gene sukama 111/113
(98 %)
0 diff
(100 %id)
EC472308.
matches multiple genes
Prostate .h 669 to 778 115 to 6     also hits gene sukama 110/115
(95 %)
0 diff
(100 %id)
EC514498.
matches multiple genes
Prostate .h 669 to 778 114 to 6     also hits gene sukama 109/114
(95 %)
0 diff
(100 %id)
AA937575.
matches multiple genes
ovary, serous adenocarcinoma .h 683 to 772 1 to 90     Submitted on the opposite strand, also hits gene sukama 90/90
(100 %)
3 diff
(96.7 %id)
CU443586.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU444479.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU444618.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU444645.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU445867.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU446010.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU447037.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU448493.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU449438.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU449881.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU450884.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU453508.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
CU456797.
matches multiple genes
epidermis .h 687 to 780 99 to 5     Submitted on the opposite strand, also hits gene sukama 95/106
(89 %)
0 diff
(100 %id)
DB290527.
matches multiple genes
uterus .i 1 to 566 2 to 567   tiling clone, capped also hits gene sukama 566/566
(100 %)
1 diff
(99.9 %id)
DB238298.
matches multiple genes
trachea .i 12 to 580 2 to 570   capped also hits gene sukama 569/569
(100 %)
1 diff
(99.9 %id)
DA381108.
matches multiple genes
thalamus .i 13 to 536 2 to 525   capped also hits gene sukama 524/524
(100 %)
0 diff
(100 %id)
DB214677.
matches multiple genes
trachea .i 13 to 548 2 to 539   capped also hits gene sukama 538/538
(100 %)
2 diff
(99.7 %id)
DB228441.
matches multiple genes
trachea .i 13 to 572 2 to 561   capped also hits gene sukama 560/560
(100 %)
0 diff
(100 %id)
DB271380.
matches multiple genes
uterus .i 13 to 552 2 to 541   capped also hits gene sukama 540/540
(100 %)
1 diff
(99.9 %id)
CR988539.
matches multiple genes
T-Lymphocytes .i 24 to 610 1 to 587     also hits gene sukama 587/591
(99 %)
1 diff
(99.9 %id)
DA806176.
matches multiple genes
brain .i 29 to 601 2 to 574   capped also hits gene sukama 573/573
(100 %)
0 diff
(100 %id)
DA402770.
matches multiple genes
thalamus .i 48 to 593 2 to 547   capped also hits gene sukama 546/546
(100 %)
2 diff
(99.7 %id)
CR616208.
matches multiple genes
Placenta Cot 25-normalized .i 331 to 2252 1 to 1922 exact tiling clone, also hits gene sukama 1922/1922
(100 %)
0 diff
(100 %id)
BX368819.
matches multiple genes
Placenta Cot 25-normalized .i 592 to 1523 1 to 931     also hits gene sukama 931/932
(99 %)
46 diff
(95.1 %id)
BX347675.
matches multiple genes
Placenta Cot 25-normalized .i 758 to 1588 870 to 42     also hits gene sukama 829/874
(94 %)
0 diff
(100 %id)
BY993815.
matches multiple genes
  .i 859 to 1498 21 to 660     also hits gene sukama 640/660
(96 %)
9 diff
(98.7 %id)
DA949388.
matches multiple genes
Spleen .i 931 to 1489 2 to 562   capped also hits gene sukama 561/561
(100 %)
2 diff
(99.7 %id)
AW817684.
matches multiple genes
stomach .i 1249 to 1534 1 to 285     also hits gene sukama 285/285
(100 %)
5 diff
(98.3 %id)
BF375458.
matches multiple genes
stomach .i 1252 to 1534 18 to 301     also hits gene sukama 284/301
(94 %)
6 diff
(98.1 %id)
AW817565.
matches multiple genes
stomach .i 1258 to 1535 281 to 2     also hits gene sukama 280/281
(99 %)
0 diff
(100 %id)
BX399589.
matches multiple genes
Placenta Cot 25-normalized .i 1267 to 2252 981 to 1 F7X G8R S9Q L10S S11V ...   also hits gene sukama 981/981
(100 %)
28 diff
(97.2 %id)
DB005809.
matches multiple genes
breast, tumor tissue .i 1362 to 1933 2 to 573   capped also hits gene sukama 572/572
(100 %)
0 diff
(100 %id)
CA429344.
matches multiple genes
Cell Line, Chondrosarcoma .i 1679 to 2284 620 to 16 exact tiling clone, AAA also hits gene sukama 605/605
(100 %)
1 diff
(99.9 %id)
BG767356.
matches multiple genes
melanotic melanoma, high MDR (cell line), skin .j 1 to 708 1 to 708 exact tiling clone, also hits gene sukama 708/708
(100 %)
5 diff
(99.3 %id)
BF689560.
matches multiple genes
melanotic melanoma, high MDR (cell line), skin .j 2 to 639 1 to 641 exact tiling clone, fully sequenced, also hits gene sukama 641/641
(100 %)
5 diff
(99.3 %id)
BG480189.
matches multiple genes
choriocarcinoma, placenta .j 460 to 1017 1 to 562     also hits gene sukama 562/820
(68 %)
7 diff
(99.2 %id)
BF690476.
matches multiple genes
melanotic melanoma, high MDR (cell line), skin .j 609 to 1193 592 to 5   tiling clone, fully sequenced, also hits gene sukama 588/592
(99 %)
0 diff
(100 %id)
DA929876.
matches multiple genes
small intestine .k 1 to 557 2 to 558   tiling clone, capped also hits gene sukama 557/557
(100 %)
0 diff
(100 %id)
DA374390.
matches multiple genes
thalamus .k 6 to 548 2 to 543   capped also hits gene sukama 542/542
(100 %)
1 diff
(99.9 %id)
DA439796.
matches multiple genes
tongue, tumor tissue .k 6 to 547 2 to 544   capped also hits gene sukama 543/543
(100 %)
1 diff
(99.9 %id)
DA742129.
matches multiple genes
  .k 6 to 525 2 to 521   capped also hits gene sukama 520/520
(100 %)
0 diff
(100 %id)
DA827163.
matches multiple genes
pericardium .k 6 to 565 2 to 561   capped also hits gene sukama 560/560
(100 %)
0 diff
(100 %id)
DA937820.
matches multiple genes
Spleen .k 6 to 541 2 to 537   capped also hits gene sukama 536/536
(100 %)
0 diff
(100 %id)
DA957285.
matches multiple genes
Spleen .k 6 to 554 2 to 550   capped also hits gene sukama 549/549
(100 %)
1 diff
(99.9 %id)
DB033377.
matches multiple genes
testis .k 6 to 538 2 to 534   capped also hits gene sukama 533/533
(100 %)
0 diff
(100 %id)
DB134666.
matches multiple genes
thymus .k 6 to 571 2 to 569 N31E K32Q R33A V34L E36A ... capped also hits gene sukama 568/568
(100 %)
4 diff
(99.3 %id)
DB155641.
matches multiple genes
thymus .k 6 to 578 2 to 574   capped also hits gene sukama 573/573
(100 %)
0 diff
(100 %id)
DB196363.
matches multiple genes
trachea .k 6 to 514 2 to 512 R33P V34R C35V E36R E37G ... capped also hits gene sukama 511/511
(100 %)
2 diff
(99.7 %id)
DB263295.
matches multiple genes
uterus .k 6 to 580 2 to 576   capped also hits gene sukama 575/575
(100 %)
0 diff
(100 %id)
CR978717.
matches multiple genes
T-Lymphocytes .k 13 to 735 1 to 725 V4X R5S T6H K7Q T8N ... tiling clone, also hits gene sukama 725/728
(99 %)
6 diff
(99.2 %id)
DB153324.
matches multiple genes
thymus .k 13 to 580 2 to 569   capped also hits gene sukama 568/568
(100 %)
0 diff
(100 %id)
BX399590.
matches multiple genes
Placenta Cot 25-normalized .k 31 to 482 1 to 453     also hits gene sukama 453/676
(67 %)
6 diff
(99.2 %id)
AW157284.
matches multiple genes
brain, frontal lobe P16.b-u 13 to 509 497 to 1 C2G C5R K36E W60R M130T   also hits gene RPS17P16, sukama 497/497
(100 %)
16 diff
(96.8 %id)
BU948228.
matches multiple genes
insulinoma, Pancreas P16.b-u 42 to 504 462 to 1     also hits gene RPS17P16, sukama 462/468
(98 %)
16 diff
(96.6 %id)
CK905078.
matches multiple genes
insulinoma, Pancreas P16.b-u 44 to 504 460 to 1     also hits gene RPS17P16, sukama 460/462
(99 %)
18 diff
(96.2 %id)
BU787660.
matches multiple genes
insulinoma, Pancreas P16.b-u 44 to 504 460 to 1     also hits gene RPS17P16, sukama 460/462
(99 %)
18 diff
(96.2 %id)
BU789131.
matches multiple genes
insulinoma, Pancreas P16.b-u 44 to 504 460 to 1     also hits gene RPS17P16, sukama 460/462
(99 %)
18 diff
(96.2 %id)
BU789620.
matches multiple genes
insulinoma, Pancreas P16.b-u 44 to 504 460 to 1     also hits gene RPS17P16, sukama 460/462
(99 %)
18 diff
(96.2 %id)
TI_154044454.
matches multiple genes
  Gene sukama, variant not shown       AAA This clone was ignored, also hits gene sukama    
TI_154044454.
matches multiple genes
  Gene RPS17, variant not shown       AAA This clone was ignored, also hits gene sukama    
320 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC