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Gene RPS15TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
581 supporting clones for gene RPS15 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CA426260 Bone, Subchondral Bone .a 1 to 617 635 to 18   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 618/645
(95 %)
1 diff
(99.9 %id)
TI_57151033   .a 6 to 567 28 to 588       561/826
(67 %)
11 diff
(98.7 %id)
CR592941 Neuroblastoma Cot 25-normalized .a 7 to 617 1 to 611       611/611
(100 %)
0 diff
(100 %id)
BX376294 Neuroblastoma Cot 25-normalized .a 7 to 617 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
BM558707 amelanotic melanoma, cell line, skin .a 7 to 617 1 to 611   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 611/627
(97 %)
2 diff
(99.7 %id)
BI762431 pooled colon, kidney, stomach .a 8 to 567 1 to 560       560/697
(80 %)
13 diff
(98.2 %id)
BM912258 amelanotic melanoma, cell line, skin .a 8 to 617 1 to 610   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 610/627
(97 %)
2 diff
(99.7 %id)
BM915480 amelanotic melanoma, cell line, skin .a 8 to 617 1 to 610   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 610/627
(97 %)
2 diff
(99.7 %id)
BM790363 Ascites, stomach .a 22 to 559 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BE794493 lung, small cell carcinoma .a 24 to 617 1 to 594   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 594/793
(74 %)
4 diff
(99.5 %id)
BG057843 blood, lymphocyte .a 99 to 617 519 to 1       519/519
(100 %)
0 diff
(100 %id)
BX394649 Neuroblastoma Cot 25-normalized .a 150 to 1104 1 to 941   tiling clone,   941/1014
(92 %)
18 diff
(98.3 %id)
BE901983 choriocarcinoma, placenta .a 166 to 975 1 to 801   tiling clone,   801/893
(89 %)
20 diff
(97.8 %id)
BX283413 endometrium, adenocarcinoma cell line, uterus .a 961 to 1462 1 to 502   tiling clone,   502/502
(100 %)
2 diff
(99.7 %id)
BC006431 Uterus, endometrium adenocarcinoma .a 962 to 2061 1 to 1101   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (21/21 A in genome downstream of last aligned base) 1101/1101
(100 %)
2 diff
(99.9 %id)
BE392148 endometrium, adenocarcinoma cell line, uterus .a 981 to 1435 1 to 456   available from MGC,   456/456
(100 %)
3 diff
(99.4 %id)
BU930930 ovary, teratocarcinoma, cell line .b 1 to 857 1 to 866 N147H Q148P V149G E150G I151D ... tiling clone, AAA   866/885
(97 %)
18 diff
(98.0 %id)
CN275166 embryonic stem cells, DMSO-treated H9 cellline .b 10 to 495 1 to 486       486/486
(100 %)
8 diff
(98.4 %id)
DB490063 hypothalamus .b 23 to 489 1 to 463       463/473
(97 %)
10 diff
(97.9 %id)
TI_45214676   .b 27 to 872 92 to 929 A42T Y141*     838/929
(90 %)
27 diff
(97.1 %id)
AW248388 lung, small cell carcinoma .b 38 to 312 9 to 286       278/286
(97 %)
6 diff
(98.0 %id)
AI188924 placenta .b 43 to 488 446 to 1       446/446
(100 %)
0 diff
(100 %id)
BF969446 adrenal cortex carcinoma, cell line, adrenal gland .b 57 to 818 1 to 752       752/931
(80 %)
20 diff
(97.9 %id)
AA621821 colon, colon tumor RER+ .b 58 to 506 450 to 2       449/450
(99 %)
0 diff
(100 %id)
BG701925 brain, hippocampus .b 93 to 872 6 to 783 H158T Y159T L160W G161A E162S ... tiling clone, AAA   778/783
(99 %)
11 diff
(98.6 %id)
DR422277 eye, Pterygium .b 99 to 680 1 to 582       582/582
(100 %)
0 diff
(100 %id)
AI971770 fibrotheoma, ovary .b 203 to 496 298 to 5       294/298
(98 %)
0 diff
(100 %id)
BQ575997 Chondrosarcoma Grade II, Left Pelvis .b 241 to 872 650 to 19 exact tiling clone, AAA   632/632
(100 %)
0 diff
(100 %id)
BG926524 cartilage .b 398 to 872 78 to 555   AAA   478/484
(98 %)
6 diff
(98.8 %id)
BI462371 testis .c 1 to 550 1 to 550 K145R tiling clone, AAA   550/550
(100 %)
3 diff
(99.5 %id)
NM_001018.3   .c 20 to 550 1 to 531 exact RefSeq,   531/531
(100 %)
0 diff
(100 %id)
DB486197 hypothalamus .c 23 to 446 1 to 424       424/424
(100 %)
0 diff
(100 %id)
DA737670   .c 24 to 550 2 to 528 exact capped   527/527
(100 %)
0 diff
(100 %id)
EC540935 Prostate .c 36 to 134 1 to 99       99/99
(100 %)
0 diff
(100 %id)
BC105810 Pooled, 40 cell lines .c 42 to 551 1 to 510 exact AAA   510/510
(100 %)
3 diff
(99.5 %id)
EC543034 Prostate .c 43 to 148 1 to 103       103/103
(100 %)
6 diff
(94.2 %id)
CB110592 Liver .c 52 to 525 1 to 474 exact     474/474
(100 %)
0 diff
(100 %id)
BP197134 adrenal gland .c 53 to 550 1 to 498 exact AAA   498/498
(100 %)
0 diff
(100 %id)
TI_45209585   .c 53 to 550 128 to 625 exact AAA   498/625
(79 %)
7 diff
(98.9 %id)
J02984   .c 53 to 550 1 to 498 exact     498/498
(100 %)
0 diff
(100 %id)
CB109975 Liver .c 53 to 469 1 to 417       417/417
(100 %)
0 diff
(100 %id)
AU119393 whole embryo, mainly head .c 54 to 550 2 to 498 exact capped   497/497
(100 %)
1 diff
(99.8 %id)
TI_57148319   .c 54 to 550 30 to 525 exact AAA   496/525
(94 %)
6 diff
(98.9 %id)
DA904630   .c 54 to 518 2 to 466   capped   465/465
(100 %)
0 diff
(100 %id)
TI_44166123   .c 55 to 551 120 to 618 L80P R81A D82G M83H I84D ...     499/772
(64 %)
9 diff
(98.9 %id)
TI_45210747   .c 55 to 551 127 to 622 exact AAA   496/799
(62 %)
8 diff
(99.0 %id)
TI_45210829   .c 55 to 550 86 to 580 exact AAA   495/580
(85 %)
7 diff
(98.8 %id)
TI_45212621   .c 55 to 550 82 to 576 exact AAA   495/576
(85 %)
6 diff
(99.0 %id)
TI_44344141   .c 55 to 550 86 to 579 G132A I133S A135P T136P H137T ... AAA   494/579
(85 %)
8 diff
(98.7 %id)
CB134472 Liver .c 55 to 550 1 to 496 G117X AAA   496/496
(100 %)
0 diff
(100 %id)
BY795075 eye .c 56 to 551 1 to 496 exact     496/496
(100 %)
0 diff
(100 %id)
BP268079 thyroid .c 58 to 641 1 to 584 exact     584/584
(100 %)
0 diff
(100 %id)
CB109140 Liver .c 58 to 549 1 to 492 exact     492/492
(100 %)
0 diff
(100 %id)
BP274730 Kidney .c 59 to 552 1 to 494 exact AAA   494/494
(100 %)
0 diff
(100 %id)
BJ992590 hepatoblastoma .c 61 to 498 1 to 438       438/438
(100 %)
0 diff
(100 %id)
CB113221 Liver .c 61 to 437 1 to 377       377/377
(100 %)
0 diff
(100 %id)
BP288986 lung .c 61 to 550 1 to 490 exact AAA   490/490
(100 %)
0 diff
(100 %id)
BP316341 pericardium .c 61 to 550 1 to 490 K127X S139X AAA   490/490
(100 %)
0 diff
(100 %id)
BM850360 stomach .c 61 to 495 25 to 459       435/435
(100 %)
0 diff
(100 %id)
BM856496 stomach .c 61 to 549 1 to 489 exact     489/489
(100 %)
0 diff
(100 %id)
BP343377 stomach mucosa .c 61 to 550 1 to 490 exact AAA   490/490
(100 %)
0 diff
(100 %id)
TI_159688881   .c 61 to 550 64 to 553 exact AAA Submitted on the opposite strand 490/553
(88 %)
6 diff
(99.0 %id)
BP369098 testis .c 61 to 550 1 to 490 exact AAA   490/490
(100 %)
0 diff
(100 %id)
BP376024 uterus .c 61 to 550 1 to 490 exact AAA   490/490
(100 %)
0 diff
(100 %id)
CD385238 embryonic trophoblasts, made from WA01 stemcells .c 62 to 550 1 to 489 exact AAA   489/489
(100 %)
0 diff
(100 %id)
EC458822 Prostate .c 62 to 162 1 to 103       103/103
(100 %)
3 diff
(97.1 %id)
EC580600 Prostate .c 62 to 157 1 to 97       97/97
(100 %)
1 diff
(99.0 %id)
DB487616 hypothalamus .c 62 to 509 1 to 448       448/448
(100 %)
0 diff
(100 %id)
DA611308   .c 62 to 430 2 to 370   capped   369/369
(100 %)
0 diff
(100 %id)
TI_57150584   .c 62 to 550 23 to 511 exact AAA   489/511
(95 %)
5 diff
(99.1 %id)
BM887640 eye .c 63 to 550 1 to 488 exact AAA   488/488
(100 %)
0 diff
(100 %id)
EC467422 Prostate .c 63 to 157 1 to 95       95/95
(100 %)
0 diff
(100 %id)
EC515109 Prostate .c 63 to 162 1 to 100       100/100
(100 %)
0 diff
(100 %id)
EC554034 Prostate .c 63 to 162 1 to 100       100/100
(100 %)
0 diff
(100 %id)
TI_154192332   .c 63 to 550 51 to 538 exact AAA   488/488
(100 %)
0 diff
(100 %id)
DB451095 testis .c 64 to 531 1 to 468 exact     468/468
(100 %)
0 diff
(100 %id)
DB464162 hippocampus .c 64 to 531 1 to 469 I142H L144S K145Q     469/469
(100 %)
1 diff
(99.8 %id)
DB503029 hypothalamus .c 64 to 502 1 to 439       439/439
(100 %)
0 diff
(100 %id)
TI_57151698   .c 64 to 524 24 to 483 V20G D21G L22P D23R Q24P ...     460/882
(52 %)
9 diff
(99.0 %id)
TI_57163764   .c 64 to 550 65 to 550 exact AAA   486/550
(88 %)
6 diff
(99.0 %id)
TI_57165038   .c 64 to 510 63 to 509       447/1110
(40 %)
8 diff
(99.3 %id)
EC555768 Prostate .c 66 to 163 1 to 99       99/99
(100 %)
3 diff
(97.0 %id)
TI_57147108   .c 66 to 552 23 to 510 K145Q AAA   488/510
(95 %)
8 diff
(98.5 %id)
EC488078 Prostate .c 67 to 163 1 to 97       97/97
(100 %)
0 diff
(100 %id)
TI_57193252   .c 67 to 550 39 to 521 exact AAA   483/521
(92 %)
6 diff
(98.9 %id)
F26212 pectoral muscle (after mastectomy) .c 67 to 348 6 to 286       281/286
(98 %)
7 diff
(97.6 %id)
EC560331 Prostate .c 68 to 157 1 to 90       90/90
(100 %)
0 diff
(100 %id)
EC570145 Prostate .c 68 to 168 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
EC578815 Prostate .c 68 to 168 1 to 101       101/101
(100 %)
0 diff
(100 %id)
BM552333 astrocytoma grade IV, cell line, brain .c 68 to 550 1 to 483 exact AAA   483/483
(100 %)
0 diff
(100 %id)
TI_154191249   .c 68 to 552 47 to 531 exact AAA   485/485
(100 %)
0 diff
(100 %id)
AJ573184 pectoral muscle (after mastectomy) .c 70 to 190 7 to 127       121/127
(95 %)
6 diff
(95.3 %id)
AJ713831 bone marrow .c 70 to 192 6 to 128       123/128
(96 %)
8 diff
(93.8 %id)
EC456258 Prostate .c 70 to 172 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC495528 Prostate .c 70 to 172 1 to 103       103/103
(100 %)
0 diff
(100 %id)
TI_57217908   .c 70 to 550 30 to 510 G99V K100Q T101D F102L N103Q ... AAA   481/510
(94 %)
7 diff
(98.7 %id)
TI_57164499   .c 70 to 550 59 to 538 exact AAA   480/538
(89 %)
6 diff
(98.9 %id)
F29696 pectoral muscle (after mastectomy) .c 70 to 181 1 to 112       112/112
(100 %)
3 diff
(97.4 %id)
EL947398 eyeball .c 71 to 545 1 to 478 H54L S55L L56P L57A K58E ...     478/478
(100 %)
7 diff
(98.6 %id)
EL948708 eyeball .c 71 to 524 1 to 456 G117E E118R F119V S120L I121H ...     456/456
(100 %)
5 diff
(99.0 %id)
EL948758 eyeball .c 71 to 550 1 to 481 E74G V75S V76G K77E T78D ... AAA   481/481
(100 %)
3 diff
(99.4 %id)
BI762980 pooled colon, kidney, stomach .c 71 to 550 1 to 480 exact AAA   480/480
(100 %)
0 diff
(100 %id)
AJ705581 bone marrow .c 72 to 529 8 to 465 exact     458/465
(98 %)
6 diff
(98.8 %id)
EC449535 Prostate .c 72 to 168 1 to 94       94/94
(100 %)
5 diff
(94.7 %id)
EC500232 Prostate .c 72 to 165 1 to 94       94/94
(100 %)
0 diff
(100 %id)
AW163458 brain, frontal lobe .c 72 to 499 1 to 428       428/428
(100 %)
0 diff
(100 %id)
CF129531 Chondrosarcoma Lung Metastasis cell lines, lung .c 72 to 552 1 to 481 exact AAA   481/481
(100 %)
0 diff
(100 %id)
BG899734 cartilage .c 73 to 379 84 to 390       307/320
(95 %)
0 diff
(100 %id)
EC560531 Prostate .c 73 to 167 1 to 95       95/95
(100 %)
6 diff
(93.7 %id)
AI625563 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 73 to 551 479 to 1 exact     479/479
(100 %)
0 diff
(100 %id)
BI253313 cervical carcinoma cell line, cervix .c 73 to 550 26 to 503 exact AAA   478/503
(95 %)
6 diff
(98.9 %id)
TI_57192288   .c 73 to 550 55 to 532 exact AAA   478/485
(98 %)
6 diff
(98.8 %id)
AJ572775 pectoral muscle (after mastectomy) .c 75 to 379 1 to 305       305/305
(100 %)
0 diff
(100 %id)
AJ709506 heart .c 75 to 551 492 to 16 exact   Submitted on the opposite strand 477/497
(95 %)
0 diff
(100 %id)
BG899270 cartilage .c 75 to 479 81 to 570       490/507
(96 %)
8 diff
(98.5 %id)
BF726955 eye, lens .c 75 to 547 1 to 473 exact     473/473
(100 %)
0 diff
(100 %id)
EC459640 Prostate .c 75 to 168 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC468432 Prostate .c 75 to 168 1 to 92       92/92
(100 %)
4 diff
(95.7 %id)
EC492498 Prostate .c 75 to 168 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC499683 Prostate .c 75 to 165 1 to 96       96/96
(100 %)
10 diff
(89.6 %id)
EC506539 Prostate .c 75 to 168 1 to 94       94/94
(100 %)
2 diff
(97.9 %id)
EC512857 Prostate .c 75 to 168 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC523282 Prostate .c 75 to 168 1 to 94       94/94
(100 %)
0 diff
(100 %id)
EC565705 Prostate .c 75 to 168 1 to 93       93/93
(100 %)
3 diff
(96.8 %id)
AA514900.
matches multiple genes
Prostate .c 75 to 551 475 to 3     also hits gene RPS15P4 473/475
(99 %)
13 diff
(97.3 %id)
BG760163 B-cells, primary B-cells from tonsils (cell line) .c 75 to 550 1 to 476 exact AAA   476/476
(100 %)
1 diff
(99.8 %id)
BI836905 pooled pancreas and spleen .c 75 to 550 1 to 476 exact AAA   476/476
(100 %)
0 diff
(100 %id)
BI834169 pooled pancreas and spleen .c 75 to 550 1 to 476 exact AAA   476/476
(100 %)
0 diff
(100 %id)
BM014635 breast, mammary adenocarcinoma, cell line .c 75 to 550 1 to 476 exact AAA   476/476
(100 %)
0 diff
(100 %id)
BM020738 astrocytoma grade IV, cell line, brain .c 75 to 550 1 to 476 exact AAA   476/476
(100 %)
1 diff
(99.8 %id)
TI_57187656   .c 75 to 550 51 to 526 exact AAA   476/476
(100 %)
0 diff
(100 %id)
TI_57190419   .c 75 to 550 52 to 526 H137T S138P S139P R140A F141S ... AAA   475/475
(100 %)
1 diff
(99.8 %id)
TI_59392679   .c 75 to 550 83 to 558 exact AAA   476/476
(100 %)
0 diff
(100 %id)
CB117334 Liver .c 75 to 493 1 to 419       419/419
(100 %)
0 diff
(100 %id)
AA362662   .c 76 to 368 1 to 291     Submitted on the opposite strand 291/291
(100 %)
3 diff
(99.0 %id)
CD610371   .c 76 to 379 310 to 7       304/317
(95 %)
0 diff
(100 %id)
EC442197 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC442564 Prostate .c 76 to 167 1 to 92       92/92
(100 %)
4 diff
(95.7 %id)
EC467653 Prostate .c 76 to 168 1 to 90       90/90
(100 %)
7 diff
(92.3 %id)
EC467721 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC485831 Prostate .c 76 to 167 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC493366 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC493675 Prostate .c 76 to 168 1 to 92       92/92
(100 %)
1 diff
(99.0 %id)
EC506689 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
EC507440 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC517754 Prostate .c 76 to 167 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC548646 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC550671 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC550923 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
EC552193 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
EC569680 Prostate .c 76 to 168 1 to 93       93/93
(100 %)
0 diff
(100 %id)
BQ636468 eye, retina .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BF310677 brain, neuroblastoma .c 76 to 550 1 to 475 P131X AAA   475/475
(100 %)
0 diff
(100 %id)
BF974967 B-cells, primary B-cells from tonsils (cell line) .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BG489974 large cell carcinoma, lung .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BG476579 melanotic melanoma, skin .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BG575365 breast, mammary adenocarcinoma, cell line .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BQ109212 cervical carcinoma cell line, cervix .c 76 to 550 1 to 475 exact     475/475
(100 %)
0 diff
(100 %id)
BI838370 pooled pancreas and spleen .c 76 to 552 1 to 477 exact AAA   477/477
(100 %)
0 diff
(100 %id)
BI835404 pooled pancreas and spleen .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BM015298 breast, mammary adenocarcinoma, cell line .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
BM904811 melanotic melanoma, skin .c 76 to 550 1 to 475 exact     475/502
(94 %)
1 diff
(99.9 %id)
BM966893.
matches multiple genes
Islets of Langerhans, Pancreas .c 76 to 550 1 to 475 exact   also hits gene RPS15P4 475/475
(100 %)
0 diff
(100 %id)
BU155723 melanotic melanoma, skin .c 76 to 550 1 to 475 exact     475/479
(99 %)
1 diff
(99.8 %id)
BU506997 leiomyosarcoma, uterus .c 76 to 550 1 to 475 exact AAA   475/475
(100 %)
0 diff
(100 %id)
CF619129 Pooled Chondrosarcoma Tumor cells .c 76 to 550 9 to 483 exact AAA   475/483
(98 %)
0 diff
(100 %id)
TI_43960678   .c 76 to 550 46 to 520   AAA   475/520
(91 %)
6 diff
(98.9 %id)
TI_57202140   .c 76 to 550 34 to 505 M70W E71R K72S P73R E74K ... AAA   472/505
(93 %)
3 diff
(99.5 %id)
TI_57147772   .c 76 to 551 26 to 503       478/1102
(43 %)
9 diff
(99.2 %id)
TI_57163009   .c 76 to 552 32 to 508 exact AAA   477/508
(93 %)
0 diff
(100 %id)
TI_57166063   .c 76 to 550 72 to 546 exact AAA   475/546
(86 %)
0 diff
(100 %id)
TI_59393451   .c 76 to 550 50 to 524 exact AAA   475/475
(100 %)
0 diff
(100 %id)
TI_59393526   .c 76 to 550 51 to 525 exact AAA   475/475
(100 %)
0 diff
(100 %id)
TI_59393614   .c 76 to 550 133 to 607 exact AAA   475/475
(100 %)
0 diff
(100 %id)
TI_59387760   .c 76 to 550 115 to 589 exact AAA   475/475
(100 %)
0 diff
(100 %id)
TI_59389207   .c 76 to 550 107 to 581 exact AAA   475/475
(100 %)
0 diff
(100 %id)
CT003121 T-Lymphocytes .c 76 to 550 1 to 475 exact     475/475
(100 %)
0 diff
(100 %id)
BM797233 Ascites, stomach .c 76 to 501 1 to 426       426/426
(100 %)
0 diff
(100 %id)
DN994932 brain, whole brain .c 76 to 550 9 to 483 exact AAA   475/483
(98 %)
0 diff
(100 %id)
BM687480 eye, eye anterior segment .c 76 to 393 9 to 327       319/327
(97 %)
2 diff
(99.4 %id)
BM687487.
matches multiple genes
eye, eye anterior segment .c 76 to 530 9 to 463 exact   also hits gene RPS15P4 455/463
(98 %)
0 diff
(100 %id)
TI_153958497   .c 76 to 550 74 to 548 A63G M93K V94G Y115H Y123* AAA   475/475
(100 %)
15 diff
(96.9 %id)
AA356731   .c 77 to 347 1 to 269       269/269
(100 %)
3 diff
(98.9 %id)
AA367401.
matches multiple genes
Pancreas .c 77 to 405 1 to 328     also hits gene RPS15P4 328/329
(99 %)
4 diff
(98.8 %id)
AJ572049 pectoral muscle (after mastectomy) .c 77 to 182 1 to 106       106/108
(98 %)
1 diff
(99.1 %id)
AJ572773 pectoral muscle (after mastectomy) .c 77 to 301 1 to 225       225/225
(100 %)
0 diff
(100 %id)
BF727358 eye, lens .c 77 to 544 1 to 468 G117X     468/468
(100 %)
0 diff
(100 %id)
CN255752 embryonic stem cells, DMSO-treated H9 cellline .c 77 to 451 1 to 375       375/375
(100 %)
0 diff
(100 %id)
EC464297 Prostate .c 77 to 168 1 to 91       91/91
(100 %)
1 diff
(99.0 %id)
EC473236 Prostate .c 77 to 168 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC477280 Prostate .c 77 to 168 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC481615 Prostate .c 77 to 168 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC494099 Prostate .c 77 to 168 1 to 93       93/93
(100 %)
2 diff
(97.9 %id)
EC494120 Prostate .c 77 to 168 1 to 91       91/91
(100 %)
2 diff
(97.9 %id)
EC501444 Prostate .c 77 to 167 1 to 91       91/91
(100 %)
1 diff
(99.0 %id)
EC528115 Prostate .c 77 to 168 1 to 91       91/91
(100 %)
2 diff
(97.9 %id)
EC542468 Prostate .c 77 to 168 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC545187 Prostate .c 77 to 167 1 to 90       90/90
(100 %)
2 diff
(97.8 %id)
EC546796 Prostate .c 77 to 175 1 to 99       99/99
(100 %)
0 diff
(100 %id)
EC582235 Prostate .c 77 to 168 1 to 92       92/92
(100 %)
1 diff
(99.0 %id)
ES307708 beard hair, skin .c 77 to 204 1 to 129       129/134
(96 %)
2 diff
(98.6 %id)
D52381   .c 77 to 397 1 to 319       319/319
(100 %)
1 diff
(99.7 %id)
BG249316 hypernephroma, cell line, Kidney .c 77 to 550 1 to 474 exact AAA   474/474
(100 %)
0 diff
(100 %id)
TI_57201961   .c 77 to 550 35 to 507 H137T S138P S139P R140A F141S ... AAA   473/507
(93 %)
1 diff
(99.9 %id)
AU126898.
matches multiple genes
  .c 77 to 550 2 to 475 F15L capped also hits gene RPS15P4 474/474
(100 %)
1 diff
(99.8 %id)
AA341646 Kidney .c 78 to 359 1 to 281       281/281
(100 %)
4 diff
(98.6 %id)
AA362706 ovary .c 78 to 395 1 to 318       318/318
(100 %)
6 diff
(98.2 %id)
AJ571840 pectoral muscle (after mastectomy) .c 78 to 249 1 to 172       172/172
(100 %)
0 diff
(100 %id)
AJ573275 pectoral muscle (after mastectomy) .c 78 to 379 7 to 308       302/308
(98 %)
0 diff
(100 %id)
EC452315 Prostate .c 78 to 168 1 to 91       91/91
(100 %)
0 diff
(100 %id)
EC455158 Prostate .c 78 to 168 1 to 91       91/91
(100 %)
0 diff
(100 %id)
EC455838 Prostate .c 78 to 168 1 to 91       91/91
(100 %)
0 diff
(100 %id)
EC472716 Prostate .c 78 to 167 1 to 89       89/89
(100 %)
1 diff
(98.9 %id)
EC475357 Prostate .c 78 to 168 1 to 91       91/91
(100 %)
0 diff
(100 %id)
EC481115 Prostate .c 78 to 168 1 to 91       91/91
(100 %)
0 diff
(100 %id)
EC517246 Prostate .c 78 to 167 1 to 90       90/90
(100 %)
0 diff
(100 %id)
EC546593 Prostate .c 78 to 168 1 to 92       92/92
(100 %)
3 diff
(96.8 %id)
BI761693 pooled colon, kidney, stomach .c 78 to 553 1 to 476 exact AAA   476/476
(100 %)
0 diff
(100 %id)
BM917676 blood, natural killer cells, cell line .c 78 to 550 1 to 473 exact AAA   473/473
(100 %)
0 diff
(100 %id)
BM920720 pooled brain, lung, testis .c 78 to 554 1 to 477 exact     477/524
(91 %)
1 diff
(99.9 %id)
TI_57149220   .c 78 to 553 35 to 510 exact AAA   476/510
(93 %)
0 diff
(100 %id)
F28619 pectoral muscle (after mastectomy) .c 78 to 405 1 to 325       325/325
(100 %)
2 diff
(99.4 %id)
F26785 pectoral muscle (after mastectomy) .c 78 to 362 11 to 294       284/294
(96 %)
1 diff
(99.7 %id)
EC472336 Prostate .c 79 to 167 1 to 88       88/88
(100 %)
6 diff
(93.2 %id)
EC506989 Prostate .c 79 to 168 1 to 87       87/87
(100 %)
6 diff
(93.2 %id)
EC557070 Prostate .c 79 to 168 1 to 88       88/88
(100 %)
7 diff
(92.1 %id)
BM510375 insulinoma, Pancreas .c 79 to 549 1 to 471       471/471
(100 %)
4 diff
(99.2 %id)
BM919393 pooled pancreas and spleen .c 79 to 550 1 to 472 exact AAA   472/472
(100 %)
0 diff
(100 %id)
BU075770.
matches multiple genes
insulinoma, Pancreas .c 79 to 550 1 to 472   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base), also hits gene RPS15P4 472/472
(100 %)
3 diff
(99.4 %id)
BU789828.
matches multiple genes
insulinoma, Pancreas .c 79 to 550 1 to 472   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base), also hits gene RPS15P4 472/472
(100 %)
3 diff
(99.4 %id)
AA299460 uterus .c 80 to 315 1 to 234       234/234
(100 %)
1 diff
(99.6 %id)
AJ713419 bone marrow .c 80 to 527 1 to 448 exact     448/448
(100 %)
0 diff
(100 %id)
EC456820 Prostate .c 80 to 168 1 to 89       89/89
(100 %)
0 diff
(100 %id)
EC463606 Prostate .c 80 to 168 1 to 89       89/89
(100 %)
0 diff
(100 %id)
EC555288 Prostate .c 80 to 168 1 to 89       89/89
(100 %)
0 diff
(100 %id)
EC560714 Prostate .c 80 to 168 1 to 89       89/89
(100 %)
0 diff
(100 %id)
BG106216 lymph, lymphoma, cell line .c 80 to 550 1 to 471 exact AAA   471/471
(100 %)
0 diff
(100 %id)
TI_59387456   .c 80 to 551 61 to 542 R47L L49P R50A R51G K52W ...     482/841
(57 %)
23 diff
(97.3 %id)
CN255722 embryonic stem cells, DMSO-treated H9 cellline .c 81 to 341 1 to 261       261/261
(100 %)
0 diff
(100 %id)
BI861150 breast, mammary adenocarcinoma, cell line .c 81 to 550 1 to 470 exact AAA   470/470
(100 %)
0 diff
(100 %id)
TI_57192914   .c 81 to 550 35 to 504 exact AAA   470/470
(100 %)
0 diff
(100 %id)
EC444895 Prostate .c 82 to 167 1 to 86       86/86
(100 %)
0 diff
(100 %id)
EC541337 Prostate .c 82 to 168 1 to 87       87/87
(100 %)
0 diff
(100 %id)
H73671 liver and spleen .c 82 to 257 1 to 174       174/174
(100 %)
11 diff
(93.7 %id)
BU163012 melanotic melanoma, cell line, skin .c 82 to 550 1 to 469 exact AAA   469/469
(100 %)
0 diff
(100 %id)
BF176110 blood .c 83 to 363 1 to 276       276/276
(100 %)
11 diff
(96.1 %id)
AI928061 normal prostate, Prostate .c 83 to 550 468 to 1       468/468
(100 %)
0 diff
(100 %id)
AJ572365 pectoral muscle (after mastectomy) .c 84 to 182 22 to 119       98/121
(80 %)
7 diff
(94.3 %id)
AJ573955 pectoral muscle (after mastectomy) .c 84 to 248 16 to 180       165/180
(91 %)
6 diff
(96.7 %id)
AJ574607 pectoral muscle (after mastectomy) .c 84 to 191 13 to 120       108/120
(90 %)
6 diff
(95.0 %id)
AJ706251 bone marrow .c 84 to 232 13 to 161       149/161
(92 %)
6 diff
(96.3 %id)
AJ713034 bone marrow .c 84 to 229 29 to 173       145/173
(83 %)
6 diff
(96.6 %id)
AJ714097 bone marrow .c 84 to 271 18 to 204       187/204
(91 %)
6 diff
(97.1 %id)
CD176587 embryonic trophoblasts, made from WA01 stemcells .c 84 to 550 41 to 507   AAA   467/507
(92 %)
6 diff
(98.9 %id)
CR593936 neuroblastoma .c 84 to 550 1 to 467       467/467
(100 %)
0 diff
(100 %id)
CR597356 fetal liver .c 84 to 551 1 to 468       468/468
(100 %)
0 diff
(100 %id)
EC441014 Prostate .c 84 to 170 15 to 101       87/103
(84 %)
1 diff
(99.1 %id)
EC442409 Prostate .c 84 to 168 12 to 97       86/97
(88 %)
6 diff
(93.9 %id)
EC453435 Prostate .c 84 to 165 12 to 96       85/99
(85 %)
4 diff
(96.0 %id)
EC487211 Prostate .c 84 to 167 9 to 91       83/91
(91 %)
6 diff
(93.5 %id)
EC506138 Prostate .c 84 to 184 1 to 101       101/101
(100 %)
8 diff
(92.1 %id)
EC515807 Prostate .c 84 to 167 12 to 95       84/95
(88 %)
6 diff
(93.7 %id)
EC516702 Prostate .c 84 to 167 16 to 97       82/97
(84 %)
6 diff
(93.9 %id)
EC530885 Prostate .c 84 to 168 11 to 95       85/95
(89 %)
6 diff
(93.7 %id)
EC560588 Prostate .c 84 to 168 12 to 96       85/96
(88 %)
6 diff
(93.8 %id)
EC565456 Prostate .c 84 to 168 10 to 94       85/94
(90 %)
6 diff
(93.7 %id)
BF969189 adrenal cortex carcinoma, cell line, adrenal gland .c 84 to 550 1 to 467   AAA   467/467
(100 %)
0 diff
(100 %id)
BG683261.
matches multiple genes
brain, neuroblastoma, cell line .c 84 to 550 7 to 473   AAA also hits gene RPS15P4 467/473
(98 %)
6 diff
(98.8 %id)
EB388399 eye, optic nerve .c 84 to 388 6 to 311       306/311
(98 %)
9 diff
(97.2 %id)
AV750881 Pituitary .c 84 to 486 401 to 1     Submitted on the opposite strand 401/484
(82 %)
2 diff
(99.6 %id)
EC455803 Prostate .c 85 to 159 8 to 78       71/78
(91 %)
7 diff
(91.1 %id)
EC508406 Prostate .c 85 to 168 11 to 94       84/94
(89 %)
6 diff
(93.7 %id)
BG059640 brain, glioblastoma without EGFR amplification .c 85 to 550 466 to 1       466/466
(100 %)
0 diff
(100 %id)
BG744795 blood, natural killer cells, cell line .c 85 to 500 417 to 2       416/417
(99 %)
0 diff
(100 %id)
F25481 pectoral muscle (after mastectomy) .c 85 to 225 1 to 139       139/139
(100 %)
2 diff
(98.6 %id)
AA304534 aorta .c 86 to 260 3 to 176       174/176
(98 %)
9 diff
(94.9 %id)
AJ572381 pectoral muscle (after mastectomy) .c 86 to 189 1 to 104       104/104
(100 %)
0 diff
(100 %id)
AW966494   .c 86 to 551 467 to 2     Submitted on the opposite strand 466/594
(78 %)
1 diff
(99.9 %id)
EC458673 Prostate .c 86 to 184 1 to 99       99/99
(100 %)
4 diff
(96.0 %id)
EC495611 Prostate .c 86 to 168 10 to 92       83/92
(90 %)
6 diff
(93.5 %id)
EC505966 Prostate .c 86 to 168 12 to 93       82/93
(88 %)
6 diff
(93.6 %id)
EC544276 Prostate .c 86 to 168 16 to 98       83/98
(84 %)
6 diff
(93.9 %id)
EC575843 Prostate .c 86 to 168 17 to 99       83/99
(83 %)
6 diff
(94.0 %id)
TI_57183738   .c 86 to 550 70 to 534   AAA   465/534
(87 %)
6 diff
(98.9 %id)
AA303119 aorta .c 87 to 381 8 to 301       294/308
(95 %)
10 diff
(96.8 %id)
AA304548 aorta .c 87 to 368 1 to 280       280/280
(100 %)
2 diff
(99.3 %id)
EC464105 Prostate .c 87 to 168 14 to 93       80/93
(86 %)
6 diff
(93.6 %id)
AA157164   .c 87 to 490 1 to 407       407/407
(100 %)
14 diff
(96.6 %id)
BE272977 Kidney, renal cell adenocarcinoma .c 87 to 548 1 to 462       462/462
(100 %)
0 diff
(100 %id)
T06651   .c 88 to 333 245 to 1       245/405
(60 %)
2 diff
(99.6 %id)
F32311 pectoral muscle (after mastectomy) .c 88 to 196 1 to 104       104/104
(100 %)
7 diff
(93.3 %id)
EC508190 Prostate .c 89 to 168 18 to 98       81/98
(82 %)
6 diff
(93.9 %id)
EC566097 Prostate .c 89 to 178 10 to 99       90/99
(90 %)
6 diff
(94.0 %id)
ES311757 frontal balding hair, skin .c 89 to 277 1 to 187       187/187
(100 %)
1 diff
(99.5 %id)
AA311887   .c 90 to 372 1 to 282       282/282
(100 %)
1 diff
(99.7 %id)
CN255756 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 90 to 432 1 to 343       343/343
(100 %)
0 diff
(100 %id)
BM510684 insulinoma, Pancreas .c 90 to 495 38 to 443     Submitted on the opposite strand 406/434
(93 %)
7 diff
(98.4 %id)
BM511521 insulinoma, Pancreas .c 90 to 495 413 to 8     Submitted on the opposite strand 406/445
(91 %)
0 diff
(100 %id)
BQ270450 insulinoma, Pancreas .c 90 to 495 38 to 443     Submitted on the opposite strand 406/434
(93 %)
7 diff
(98.4 %id)
BQ270691 insulinoma, Pancreas .c 90 to 495 413 to 8     Submitted on the opposite strand 406/443
(91 %)
0 diff
(100 %id)
BQ614243 insulinoma, Pancreas .c 90 to 495 38 to 443     Submitted on the opposite strand 406/435
(93 %)
7 diff
(98.4 %id)
BQ614473 insulinoma, Pancreas .c 90 to 495 413 to 8     Submitted on the opposite strand 406/427
(95 %)
0 diff
(100 %id)
BM272991 insulinoma, Pancreas .c 91 to 493 403 to 1     Submitted on the opposite strand 403/403
(100 %)
12 diff
(97.1 %id)
EC453609 Prostate .c 91 to 186 1 to 96       96/96
(100 %)
0 diff
(100 %id)
EC504910 Prostate .c 91 to 186 1 to 96       96/96
(100 %)
0 diff
(100 %id)
EC581442 Prostate .c 91 to 186 1 to 95       95/95
(100 %)
3 diff
(96.9 %id)
BU579872.
matches multiple genes
insulinoma, Pancreas .c 91 to 547 464 to 8     Submitted on the opposite strand, also hits gene RPS15P4 457/464
(98 %)
1 diff
(99.8 %id)
F31135 pectoral muscle (after mastectomy) .c 91 to 339 1 to 247       247/247
(100 %)
2 diff
(99.2 %id)
F33865 pectoral muscle (after mastectomy) .c 91 to 202 1 to 112       112/112
(100 %)
3 diff
(97.4 %id)
AA341000 Kidney .c 92 to 388 1 to 294       294/294
(100 %)
3 diff
(99.0 %id)
AA353191   .c 92 to 370 1 to 277       277/277
(100 %)
5 diff
(98.2 %id)
BE935501 marrow .c 92 to 253 162 to 1       162/162
(100 %)
0 diff
(100 %id)
BQ333927 marrow .c 92 to 518 446 to 11       436/446
(97 %)
12 diff
(97.4 %id)
BQ374768.
matches multiple genes
testis_normal .c 92 to 518 438 to 12     also hits gene RPS15P4 427/438
(97 %)
0 diff
(100 %id)
EC538904 Prostate .c 92 to 187 1 to 95       95/95
(100 %)
5 diff
(94.8 %id)
DB574226 hypothalamus .c 92 to 550 1 to 459     Submitted on the opposite strand 459/459
(100 %)
1 diff
(99.8 %id)
BE384018 melanotic melanoma, skin .c 93 to 405 1 to 314       314/469
(66 %)
2 diff
(99.6 %id)
F33563 pectoral muscle (after mastectomy) .c 93 to 196 1 to 103       103/103
(100 %)
2 diff
(98.1 %id)
AA300231 uterus .c 94 to 395 1 to 303       303/303
(100 %)
6 diff
(98.1 %id)
BQ371639.
matches multiple genes
prostate_normal .c 95 to 445 355 to 5     also hits gene RPS15P4 351/355
(98 %)
0 diff
(100 %id)
EC521902 Prostate .c 95 to 186 7 to 98       92/98
(93 %)
6 diff
(93.9 %id)
EC555039 Prostate .c 95 to 187 1 to 93       93/93
(100 %)
0 diff
(100 %id)
BE276565 melanotic melanoma, skin .c 95 to 550 1 to 456       456/456
(100 %)
0 diff
(100 %id)
BE278732 choriocarcinoma, placenta .c 95 to 548 1 to 454       454/454
(100 %)
0 diff
(100 %id)
BE909905 epithelioid carcinoma, Pancreas .c 95 to 547 1 to 453       453/453
(100 %)
0 diff
(100 %id)
BE793105 lung, small cell carcinoma .c 95 to 549 1 to 455       455/455
(100 %)
0 diff
(100 %id)
AJ574245 pectoral muscle (after mastectomy) .c 96 to 184 1 to 88       88/88
(100 %)
2 diff
(97.8 %id)
CN255725 embryonic stem cells, DMSO-treated H9 cellline .c 96 to 549 1 to 454       454/454
(100 %)
0 diff
(100 %id)
EC482968 Prostate .c 96 to 187 1 to 93       93/93
(100 %)
1 diff
(99.0 %id)
BP424356 small intestine .c 96 to 550 1 to 455     Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
BE255031 eye, retinoblastoma .c 96 to 547 1 to 452       452/452
(100 %)
0 diff
(100 %id)
BE256721 eye, retinoblastoma .c 96 to 548 1 to 453       453/453
(100 %)
0 diff
(100 %id)
BE736165 adenocarcinoma, Pancreas .c 96 to 551 1 to 456       456/456
(100 %)
0 diff
(100 %id)
EC462924 Prostate .c 97 to 187 1 to 91       91/91
(100 %)
1 diff
(99.0 %id)
BE254190 eye, retinoblastoma .c 97 to 549 1 to 453       453/453
(100 %)
0 diff
(100 %id)
BE293961 muscle, rhabdomyosarcoma .c 97 to 550 1 to 454       454/454
(100 %)
0 diff
(100 %id)
BE383224 brain, neuroblastoma .c 97 to 548 1 to 452       452/452
(100 %)
0 diff
(100 %id)
BE878240 large cell carcinoma, undifferentiated, lung .c 97 to 546 1 to 450       450/450
(100 %)
0 diff
(100 %id)
F31608 pectoral muscle (after mastectomy) .c 97 to 405 1 to 300       300/300
(100 %)
11 diff
(96.4 %id)
BM507259 insulinoma, Pancreas .c 98 to 550 483 to 31   AAA Submitted on the opposite strand 453/454
(99 %)
0 diff
(100 %id)
BQ268244 insulinoma, Pancreas .c 98 to 550 483 to 31   AAA Submitted on the opposite strand 453/454
(99 %)
0 diff
(100 %id)
BM826968 Ascites, stomach .c 98 to 549 1 to 452       452/452
(100 %)
0 diff
(100 %id)
BM688016 eye, human retina .c 98 to 550 1 to 454   fully sequenced, AAA   454/454
(100 %)
1 diff
(99.8 %id)
CV355500.
matches multiple genes
heart_neonatal .c 99 to 451 409 to 57     Submitted on the opposite strand, also hits gene RPS15P4 353/427
(82 %)
1 diff
(99.8 %id)
EC584198 Prostate .c 99 to 194 1 to 96       96/96
(100 %)
0 diff
(100 %id)
BE795518 lung, small cell carcinoma .c 99 to 550 1 to 452       452/452
(100 %)
0 diff
(100 %id)
BQ549395 insulinoma, Pancreas .c 99 to 531 433 to 1       433/436
(99 %)
1 diff
(99.8 %id)
TI_59392860   .c 99 to 441 102 to 445       344/541
(63 %)
7 diff
(98.8 %id)
F24669 pectoral muscle (after mastectomy) .c 99 to 274 1 to 176       176/176
(100 %)
0 diff
(100 %id)
AA371647 pituitary gland .c 100 to 385 1 to 284       284/284
(100 %)
3 diff
(99.0 %id)
EC531527 Prostate .c 100 to 187 8 to 94       87/94
(92 %)
6 diff
(93.7 %id)
F25794 pectoral muscle (after mastectomy) .c 100 to 303 1 to 202       202/202
(100 %)
2 diff
(99.1 %id)
AA304139 aorta .c 101 to 395 1 to 297       297/300
(99 %)
9 diff
(97.0 %id)
BU783592.
matches multiple genes
insulinoma, Pancreas .c 101 to 527 1 to 427     also hits gene RPS15P4 427/427
(100 %)
5 diff
(98.9 %id)
AV751028 Pituitary .c 101 to 486 380 to 1     Submitted on the opposite strand 380/380
(100 %)
6 diff
(98.5 %id)
F31406 pectoral muscle (after mastectomy) .c 101 to 397 1 to 296       296/296
(100 %)
1 diff
(99.7 %id)
TI_153955798   .c 101 to 556 81 to 537       457/512
(89 %)
26 diff
(95.0 %id)
AA384697 thyroid gland .c 102 to 385 1 to 283       283/290
(97 %)
5 diff
(98.3 %id)
DB558908 hypothalamus .c 102 to 550 1 to 449     Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
F32461 pectoral muscle (after mastectomy) .c 102 to 197 1 to 96       96/96
(100 %)
1 diff
(99.0 %id)
BM693802.
matches multiple genes
eye, lens .c 102 to 550 1 to 449     also hits gene RPS15P4 449/449
(100 %)
1 diff
(99.8 %id)
DB566489 hypothalamus .c 103 to 550 1 to 448     Submitted on the opposite strand 448/448
(100 %)
2 diff
(99.6 %id)
BE901680 choriocarcinoma, placenta .c 103 to 549 1 to 447       447/447
(100 %)
0 diff
(100 %id)
AA319369 adrenal gland .c 104 to 368 1 to 263       263/264
(99 %)
2 diff
(99.3 %id)
H44794 breast .c 104 to 210 1 to 107       107/107
(100 %)
2 diff
(98.2 %id)
BM693172 eye, Retina Foveal and Macular .c 104 to 416 1 to 313       313/313
(100 %)
0 diff
(100 %id)
AA303327 aorta .c 105 to 395 1 to 291       291/292
(99 %)
7 diff
(97.7 %id)
BE254299 eye, retinoblastoma .c 105 to 549 1 to 445       445/445
(100 %)
0 diff
(100 %id)
BE906540 epithelioid carcinoma, Pancreas .c 105 to 545 1 to 441       441/441
(100 %)
0 diff
(100 %id)
TI_154191652   .c 105 to 550 51 to 496   AAA   446/446
(100 %)
0 diff
(100 %id)
AA192753 muscle, skeletal muscle .c 106 to 540 431 to 1       431/431
(100 %)
3 diff
(99.4 %id)
AJ573771 pectoral muscle (after mastectomy) .c 107 to 193 11 to 97       87/97
(89 %)
6 diff
(93.9 %id)
F32289 pectoral muscle (after mastectomy) .c 107 to 258 1 to 152       152/152
(100 %)
4 diff
(97.4 %id)
F25529 pectoral muscle (after mastectomy) .c 107 to 227 1 to 120       120/120
(100 %)
1 diff
(99.2 %id)
DB557001 hypothalamus .c 110 to 550 1 to 441     Submitted on the opposite strand 441/441
(100 %)
2 diff
(99.6 %id)
BU787682.
matches multiple genes
insulinoma, Pancreas .c 110 to 548 1 to 439     also hits gene RPS15P4 439/439
(100 %)
4 diff
(99.1 %id)
AJ573495 pectoral muscle (after mastectomy) .c 111 to 178 1 to 68       68/69
(98 %)
9 diff
(87.0 %id)
AJ572416 pectoral muscle (after mastectomy) .c 112 to 191 1 to 77       77/77
(100 %)
5 diff
(93.6 %id)
AI523924 B-cell, chronic lymphotic leukemia .c 112 to 551 440 to 1       440/440
(100 %)
0 diff
(100 %id)
BE260396 brain, neuroblastoma .c 112 to 549 1 to 438       438/438
(100 %)
0 diff
(100 %id)
BE397339 Burkitt lymphoma, lymph .c 112 to 548 1 to 437       437/437
(100 %)
0 diff
(100 %id)
BE561062 Burkitt lymphoma, lymph .c 112 to 548 1 to 437       437/437
(100 %)
0 diff
(100 %id)
AA315562 colon .c 113 to 222 1 to 108       108/108
(100 %)
1 diff
(99.1 %id)
AA315571 colon .c 113 to 285 1 to 171       171/171
(100 %)
1 diff
(99.5 %id)
T94178 lung .c 113 to 209 1 to 97       97/97
(100 %)
0 diff
(100 %id)
F26640 pectoral muscle (after mastectomy) .c 116 to 340 1 to 224       224/224
(100 %)
3 diff
(98.7 %id)
DB516590 testis .c 117 to 550 1 to 434     Submitted on the opposite strand 434/434
(100 %)
2 diff
(99.6 %id)
CB140409 Liver .c 118 to 236 1 to 119       119/119
(100 %)
0 diff
(100 %id)
BU734966 eye, lens .c 118 to 550 451 to 19   AAA   433/433
(100 %)
0 diff
(100 %id)
CN478499 eye, lens .c 118 to 550 451 to 19   AAA   433/433
(100 %)
0 diff
(100 %id)
TI_149307507   .c 119 to 550 533 to 102   AAA   432/957
(45 %)
0 diff
(100 %id)
H51519 brain .c 125 to 210 1 to 86       86/86
(100 %)
1 diff
(98.9 %id)
BQ267979 insulinoma, Pancreas .c 127 to 550 1 to 424   AAA Submitted on the opposite strand 424/424
(100 %)
0 diff
(100 %id)
BU579631 insulinoma, Pancreas .c 127 to 547 1 to 421     Submitted on the opposite strand 421/427
(98 %)
2 diff
(99.6 %id)
AW404944 lymph .c 128 to 388 8 to 267       260/267
(97 %)
6 diff
(97.8 %id)
TI_154142025   .c 128 to 550 81 to 502   AAA   422/422
(100 %)
4 diff
(99.1 %id)
AI863295.
matches multiple genes
brain, tumor, 5 pooled (see description) .c 131 to 550 420 to 1     Submitted on the opposite strand, also hits gene pawbabo 420/420
(100 %)
0 diff
(100 %id)
AI564456 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .c 137 to 550 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AI925625 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 140 to 551 412 to 1       412/412
(100 %)
0 diff
(100 %id)
EL949918 eyeball .c 141 to 550 1 to 410   AAA   410/410
(100 %)
3 diff
(99.3 %id)
DB559801 hypothalamus .c 144 to 550 1 to 407     Submitted on the opposite strand 407/407
(100 %)
0 diff
(100 %id)
BM090807 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .c 159 to 551 393 to 1       393/393
(100 %)
0 diff
(100 %id)
EH328508   .c 162 to 222 1 to 61       61/61
(100 %)
0 diff
(100 %id)
EH358401   .c 163 to 222 1 to 60       60/60
(100 %)
5 diff
(91.7 %id)
F22216 pectoral muscle (after mastectomy) .c 166 to 495 1 to 330       330/330
(100 %)
0 diff
(100 %id)
TI_44166206   .c 167 to 550 253 to 641   tiling clone, AAA   389/641
(60 %)
6 diff
(99.1 %id)
DB530289 hippocampus .c 169 to 550 1 to 382     Submitted on the opposite strand 382/382
(100 %)
0 diff
(100 %id)
BQ302244 breast .c 171 to 470 301 to 4       298/317
(94 %)
1 diff
(99.7 %id)
BG876529 denis_drash .c 173 to 464 290 to 1       290/290
(100 %)
4 diff
(98.7 %id)
BQ302619 breast .c 173 to 455 284 to 1       284/284
(100 %)
7 diff
(97.6 %id)
AI290933 carcinoid, lung .c 175 to 552 378 to 1       378/378
(100 %)
0 diff
(100 %id)
N54756 multiple sclerosis lesions .c 176 to 397 1 to 218       218/219
(99 %)
10 diff
(95.5 %id)
F21095 pectoral muscle (after mastectomy) .c 180 to 510 1 to 331       331/331
(100 %)
0 diff
(100 %id)
EC527245.
matches multiple genes
Prostate .c 182 to 265 84 to 1     also hits gene RPS15P4 84/84
(100 %)
0 diff
(100 %id)
CV419407 colon_ins .c 188 to 514 332 to 1     Submitted on the opposite strand 332/332
(100 %)
11 diff
(96.7 %id)
AI589631 anaplastic oligodendroglioma, brain .c 190 to 550 361 to 1       361/361
(100 %)
0 diff
(100 %id)
BQ637034 eye, retina .c 194 to 550 1 to 357       357/391
(91 %)
1 diff
(99.8 %id)
AI199280 Prostate .c 202 to 552 351 to 1       351/351
(100 %)
0 diff
(100 %id)
BE883756 leiomyosarcoma, uterus .c 203 to 544 1 to 342       342/342
(100 %)
0 diff
(100 %id)
EC545675.
matches multiple genes
Prostate .c 206 to 287 15 to 94     also hits gene RPS15P4 80/94
(85 %)
6 diff
(93.7 %id)
BQ362686 stomach .c 210 to 526 317 to 1       317/317
(100 %)
1 diff
(99.7 %id)
TI_57189582   .c 211 to 550 73 to 412   AAA   340/359
(94 %)
6 diff
(98.4 %id)
EC559807 Prostate .c 215 to 292 2 to 76       75/76
(98 %)
6 diff
(92.2 %id)
BF726153.
matches multiple genes
eye, lens .c 216 to 494 1 to 279     also hits gene PANX1 279/279
(100 %)
0 diff
(100 %id)
AA305791 aorta .c 219 to 496 1 to 278       278/278
(100 %)
0 diff
(100 %id)
CN255723 embryonic stem cells, DMSO-treated H9 cellline .c 219 to 392 1 to 174       174/174
(100 %)
1 diff
(99.5 %id)
BQ362821 stomach .c 225 to 517 293 to 1       293/293
(100 %)
2 diff
(99.4 %id)
AA369789 Prostate .c 226 to 493 269 to 1       269/270
(99 %)
4 diff
(98.6 %id)
T28110 brain .c 230 to 550 320 to 1     Submitted on the opposite strand 320/320
(100 %)
1 diff
(99.7 %id)
AJ574639 pectoral muscle (after mastectomy) .c 231 to 384 1 to 152       152/153
(99 %)
6 diff
(96.1 %id)
CV365667 marrow .c 231 to 529 322 to 25     Submitted on the opposite strand 298/323
(92 %)
0 diff
(100 %id)
AA303511 aorta .c 245 to 487 1 to 243       243/243
(100 %)
0 diff
(100 %id)
BQ303701 breast .c 252 to 532 279 to 1       279/280
(99 %)
6 diff
(97.9 %id)
BM738083 Ascites, stomach .c 252 to 540 1 to 289       289/289
(100 %)
0 diff
(100 %id)
BQ333964 marrow .c 254 to 508 257 to 7       251/266
(94 %)
12 diff
(95.5 %id)
BQ344085.
matches multiple genes
nervous_tumor .c 256 to 501 264 to 21   tiling clone, also hits gene RPS15P4 244/264
(92 %)
0 diff
(100 %id)
BQ352825 head_neck .c 256 to 501 248 to 7       242/248
(97 %)
0 diff
(100 %id)
EC544629 Prostate .c 256 to 349 13 to 106       94/106
(88 %)
6 diff
(94.4 %id)
BQ344086 nervous_tumor .c 258 to 504 251 to 10       242/252
(96 %)
8 diff
(96.9 %id)
EC517768 Prostate .c 259 to 358 1 to 101       101/101
(100 %)
6 diff
(94.1 %id)
BQ312461 breast_normal .c 261 to 542 321 to 40       282/336
(83 %)
3 diff
(99.2 %id)
BQ312475 breast_normal .c 261 to 542 321 to 40       282/336
(83 %)
3 diff
(99.2 %id)
EC473725 Prostate .c 264 to 358 9 to 104       96/104
(92 %)
6 diff
(94.3 %id)
EC572804 Prostate .c 265 to 358 11 to 104       94/104
(90 %)
6 diff
(94.3 %id)
BQ312460 breast_normal .c 266 to 542 305 to 29       277/309
(89 %)
0 diff
(100 %id)
BQ312474 breast_normal .c 266 to 542 305 to 29       277/309
(89 %)
0 diff
(100 %id)
AA160779.
matches multiple genes
Pancreas .c 267 to 551 287 to 4     also hits gene RPS15P4 284/287
(98 %)
2 diff
(99.4 %id)
BQ333895 marrow .c 270 to 441 181 to 10       172/181
(95 %)
1 diff
(99.5 %id)
BQ333978 marrow .c 270 to 518 258 to 12       247/258
(95 %)
0 diff
(100 %id)
BQ333936 marrow .c 272 to 515 244 to 1       244/246
(99 %)
2 diff
(99.2 %id)
AI612088 bone marrow, CD34+, CD38- from normal bone marrow donor .c 272 to 554 23 to 306   AAA Submitted on the opposite strand 284/306
(92 %)
8 diff
(97.4 %id)
BU726877 eye, human retina .c 273 to 550 296 to 19   fully sequenced, AAA   278/278
(100 %)
0 diff
(100 %id)
EC531377 Prostate .c 281 to 381 1 to 101       101/101
(100 %)
2 diff
(98.1 %id)
BQ344069 nervous_tumor .c 282 to 459 179 to 5       175/192
(91 %)
7 diff
(96.4 %id)
CV313001 breast .c 292 to 469 189 to 12     Submitted on the opposite strand 178/189
(94 %)
0 diff
(100 %id)
EC514373 Prostate .c 298 to 398 1 to 99       99/99
(100 %)
3 diff
(97.0 %id)
EC515816 Prostate .c 299 to 386 1 to 88       88/88
(100 %)
2 diff
(97.8 %id)
EC545244.
matches multiple genes
Prostate .c 300 to 400 1 to 101     also hits gene RPS15P4 101/101
(100 %)
0 diff
(100 %id)
EC575484.
matches multiple genes
Prostate .c 303 to 400 7 to 103     also hits gene RPS15P4 97/103
(94 %)
6 diff
(94.2 %id)
AA434414 ovarian tumor, ovary .c 304 to 550 247 to 1       247/247
(100 %)
0 diff
(100 %id)
EC536035.
matches multiple genes
Prostate .c 307 to 405 1 to 97     also hits gene RPS15P4 97/97
(100 %)
2 diff
(98.0 %id)
BE879479 large cell carcinoma, undifferentiated, lung .c 307 to 545 1 to 239       239/239
(100 %)
0 diff
(100 %id)
AA335253.
matches multiple genes
epididymis .c 308 to 549 241 to 1     Submitted on the opposite strand, also hits gene RPS15P4 241/241
(100 %)
1 diff
(99.6 %id)
BQ333953 marrow .c 311 to 513 201 to 3       199/226
(88 %)
8 diff
(96.5 %id)
CN255728 embryonic stem cells, DMSO-treated H9 cellline .c 312 to 514 1 to 203       203/203
(100 %)
0 diff
(100 %id)
AI879883 colon .c 314 to 548 235 to 1       235/235
(100 %)
16 diff
(93.2 %id)
BG875196 breast .c 316 to 528 217 to 4       214/217
(98 %)
0 diff
(100 %id)
EC554041 Prostate .c 316 to 405 1 to 88       88/94
(93 %)
3 diff
(96.9 %id)
EC568219 Prostate .c 316 to 405 1 to 87       87/94
(92 %)
4 diff
(95.8 %id)
EC473785 Prostate .c 318 to 405 1 to 88       88/94
(93 %)
4 diff
(95.8 %id)
AA362663   .c 319 to 550 232 to 1     Submitted on the opposite strand 232/234
(99 %)
0 diff
(100 %id)
BQ333921 marrow .c 319 to 515 197 to 1       197/197
(100 %)
0 diff
(100 %id)
AA984890 Spleen .c 323 to 547 225 to 1       225/225
(100 %)
21 diff
(90.7 %id)
AA987408 Kidney, kidney tumor .c 325 to 548 225 to 1       225/229
(98 %)
19 diff
(91.8 %id)
EC482441 Prostate .c 326 to 418 1 to 90       90/92
(97 %)
2 diff
(97.9 %id)
H73414 liver and spleen .c 329 to 545 220 to 4       217/221
(98 %)
4 diff
(98.2 %id)
AA552652 colon, tumor .c 331 to 550 220 to 1       220/220
(100 %)
0 diff
(100 %id)
EC565926 Prostate .c 332 to 433 1 to 104       104/104
(100 %)
6 diff
(94.3 %id)
AI927589 normal prostate, Prostate .c 332 to 550 219 to 1       219/219
(100 %)
0 diff
(100 %id)
BQ333935.
matches multiple genes
marrow .c 338 to 523 204 to 18     also hits gene RPS15P4 187/233
(80 %)
0 diff
(100 %id)
BQ334013 marrow .c 338 to 503 170 to 2       169/182
(92 %)
1 diff
(99.5 %id)
BE697701.
matches multiple genes
colon .c 341 to 514 173 to 1     also hits gene RPS15P4 173/173
(100 %)
7 diff
(96.0 %id)
BQ333957 marrow .c 341 to 528 189 to 4       186/189
(98 %)
0 diff
(100 %id)
BQ333958.
matches multiple genes
marrow .c 341 to 518 188 to 12     also hits gene RPS15P4 177/188
(94 %)
0 diff
(100 %id)
BQ333970 marrow .c 341 to 524 184 to 1       184/184
(100 %)
5 diff
(97.3 %id)
BP384479 pancreatic islet .c 344 to 499 1 to 156     Submitted on the opposite strand 156/156
(100 %)
0 diff
(100 %id)
AI671159 pooled germ cell tumors .c 347 to 550 204 to 1       204/204
(100 %)
0 diff
(100 %id)
EC547610 Prostate .c 351 to 453 1 to 103       103/103
(100 %)
0 diff
(100 %id)
EC457143 Prostate .c 356 to 453 1 to 98       98/98
(100 %)
0 diff
(100 %id)
AA296144 adipose tissue, white .c 359 to 550 192 to 1       192/194
(98 %)
2 diff
(99.0 %id)
AI540758 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .c 360 to 550 192 to 1       190/211
(90 %)
5 diff
(97.7 %id)
EH332419   .c 373 to 447 1 to 75       75/75
(100 %)
0 diff
(100 %id)
AA427634 ovarian tumor, ovary .c 385 to 550 166 to 1       166/166
(100 %)
0 diff
(100 %id)
BF911871 uterus_tumor .c 393 to 544 158 to 3     Submitted on the opposite strand 156/158
(98 %)
0 diff
(100 %id)
BQ362829 stomach .c 393 to 517 1 to 125       125/125
(100 %)
0 diff
(100 %id)
AW025679 pooled germ cell tumors .c 394 to 550 180 to 24   AAA   157/157
(100 %)
6 diff
(96.2 %id)
AI669716 Prostate .c 400 to 550 151 to 1       151/151
(100 %)
0 diff
(100 %id)
EC477580 Prostate .c 403 to 511 1 to 105       105/105
(100 %)
6 diff
(94.3 %id)
EC505419 Prostate .c 408 to 513 1 to 103       103/103
(100 %)
3 diff
(97.1 %id)
EC506119 Prostate .c 410 to 519 1 to 110       110/110
(100 %)
3 diff
(97.3 %id)
EC512799 Prostate .c 410 to 519 1 to 112       112/112
(100 %)
5 diff
(95.6 %id)
EC550047 Prostate .c 412 to 518 1 to 106       106/106
(100 %)
1 diff
(99.1 %id)
AA480763 Kidney .c 413 to 545 1 to 133       133/133
(100 %)
6 diff
(95.5 %id)
AW059891   .c 414 to 551 1 to 138       138/138
(100 %)
1 diff
(99.3 %id)
EC484173 Prostate .c 415 to 523 1 to 109       109/109
(100 %)
0 diff
(100 %id)
EC462462 Prostate .c 417 to 525 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
EC576239 Prostate .c 417 to 523 1 to 106       106/106
(100 %)
5 diff
(95.3 %id)
EC580504 Prostate .c 417 to 525 1 to 109       109/109
(100 %)
1 diff
(99.1 %id)
EC536550 Prostate .c 422 to 523 7 to 108       102/108
(94 %)
0 diff
(100 %id)
EC560827 Prostate .c 422 to 523 7 to 108       102/108
(94 %)
0 diff
(100 %id)
EC442308 Prostate .c 425 to 522 8 to 103       96/103
(93 %)
6 diff
(94.2 %id)
EC463249 Prostate .c 425 to 531 1 to 103       103/103
(100 %)
6 diff
(94.2 %id)
EC457195 Prostate .c 429 to 531 9 to 110       102/110
(92 %)
6 diff
(94.6 %id)
AI401675 Prostate .c 431 to 551 121 to 1       121/121
(100 %)
0 diff
(100 %id)
EC471421 Prostate .c 436 to 542 1 to 107       107/107
(100 %)
3 diff
(97.2 %id)
EC455552 Prostate .c 440 to 538 13 to 111       99/111
(89 %)
6 diff
(94.6 %id)
EC506069 Prostate .c 440 to 547 105 to 1       105/105
(100 %)
4 diff
(96.2 %id)
AI990194 pooled germ cell tumors .c 444 to 551 108 to 1       108/108
(100 %)
0 diff
(100 %id)
EC574603 Prostate .c 445 to 542 110 to 13       98/110
(89 %)
0 diff
(100 %id)
EC446834 Prostate .c 446 to 542 109 to 17       93/109
(85 %)
4 diff
(96.4 %id)
EC455660 Prostate .c 446 to 548 106 to 4       103/106
(97 %)
0 diff
(100 %id)
EC457813 Prostate .c 446 to 546 108 to 8       101/108
(93 %)
0 diff
(100 %id)
EC477565 Prostate .c 446 to 548 116 to 16       101/116
(87 %)
0 diff
(100 %id)
EC486773 Prostate .c 446 to 542 115 to 19       97/115
(84 %)
0 diff
(100 %id)
EC514539 Prostate .c 446 to 548 107 to 5       103/107
(96 %)
0 diff
(100 %id)
EC517474 Prostate .c 446 to 548 106 to 4       103/106
(97 %)
0 diff
(100 %id)
EC536665 Prostate .c 446 to 548 114 to 15       100/114
(87 %)
0 diff
(100 %id)
EC539762 Prostate .c 446 to 548 114 to 15       100/114
(87 %)
0 diff
(100 %id)
EC557573 Prostate .c 446 to 543 110 to 13       98/110
(89 %)
0 diff
(100 %id)
EC567292 Prostate .c 446 to 550 116 to 12       105/116
(90 %)
0 diff
(100 %id)
EC457402 Prostate .c 447 to 543 109 to 13       97/109
(88 %)
0 diff
(100 %id)
EC486312 Prostate .c 447 to 548 105 to 4       102/105
(97 %)
0 diff
(100 %id)
EC573720 Prostate .c 447 to 548 103 to 5       99/103
(96 %)
0 diff
(100 %id)
AI917473 pooled germ cell tumors .c 449 to 551 103 to 1       103/103
(100 %)
0 diff
(100 %id)
AI696112 pooled germ cell tumors .c 449 to 551 103 to 1       103/103
(100 %)
0 diff
(100 %id)
AA936157 pooled germ cell tumors .c 450 to 551 100 to 1       100/100
(100 %)
5 diff
(95.0 %id)
EC504202 Prostate .c 454 to 536 1 to 83       83/92
(90 %)
2 diff
(97.9 %id)
EC445703 Prostate .c 455 to 546 1 to 92       92/94
(97 %)
10 diff
(89.4 %id)
EC486074 Prostate .c 455 to 545 95 to 5       91/95
(95 %)
0 diff
(100 %id)
EC571942 Prostate .c 455 to 542 98 to 15       84/98
(85 %)
0 diff
(100 %id)
EC498733.
matches multiple genes
Prostate .c 461 to 543 1 to 83     also hits gene RPS15P4 83/92
(90 %)
2 diff
(97.9 %id)
EC520447 Prostate .c 462 to 551 100 to 12       89/100
(89 %)
0 diff
(100 %id)
EC578613 Prostate .c 462 to 543 1 to 83       83/92
(90 %)
3 diff
(96.8 %id)
EC545795 Prostate .c 463 to 546 92 to 10       83/92
(90 %)
0 diff
(100 %id)
EC531764 Prostate .c 489 to 548 65 to 6       60/65
(92 %)
0 diff
(100 %id)
EC550402 Prostate .c 495 to 551 1 to 57       57/58
(98 %)
2 diff
(96.6 %id)
BG424256 Kidney, renal cell adenocarcinoma .d 1 to 570 2 to 583 Q24T L25A L26A D27G M28H ... tiling clone,   583/652
(89 %)
17 diff
(97.4 %id)
CX166620 human embryonic stem cells differentiated toan early endodermal cell type .d 10 to 569 1 to 560   tiling clone, AAA   560/560
(100 %)
1 diff
(99.9 %id)
AI370011   .d 97 to 569 485 to 15   AAA   471/471
(100 %)
8 diff
(98.4 %id)
CD108311 brain, Pituitary .d 403 to 569 1 to 167   AAA   167/167
(100 %)
1 diff
(99.5 %id)
BG611596 adenocarcinoma, Prostate .e -9 to 517 1 to 529 T74N F75L N76Q Q77P V78G ... tiling clone,   529/915
(57 %)
4 diff
(99.6 %id)
BU598787 mixed (pool of 40 RNAs) .e 34 to 524 1 to 496 E83R M84D I85D G86R H87P ... tiling clone,   496/809
(61 %)
8 diff
(99.1 %id)
BM040962 Kidney, Wilms' tumor, cell line .f 1 to 492 1 to 492   tiling clone,   492/492
(100 %)
5 diff
(99.0 %id)
BC080543 Kidney, Wilm's tumor .f 2 to 1612 1 to 1611 exact tiling clone, available from MGC, AAA   1611/1611
(100 %)
1 diff
(100.0 %id)
BQ632096 Pancreas, Purified pancreatic islet .f 177 to 708 1 to 532     Submitted on the opposite strand 532/532
(100 %)
0 diff
(100 %id)
AA431597   .f 252 to 609 358 to 1     Submitted on the opposite strand 358/358
(100 %)
5 diff
(98.7 %id)
DB324205   .f 486 to 1007 1 to 522     Submitted on the opposite strand 522/522
(100 %)
1 diff
(99.9 %id)
CB528456 Aveolar Macrophage, lung .f 981 to 1612 650 to 19 exact tiling clone, AAA   632/632
(100 %)
0 diff
(100 %id)
AA581450 bulk alveolar tumor .f 1187 to 1612 451 to 34 R7A Q8S R9G R10G R11G ... AAA   418/425
(98 %)
17 diff
(96.0 %id)
CD246545 embryonic stem cells, WA01, passage 38 .g 1 to 518 44 to 561 exact tiling clone, AAA   518/561
(92 %)
6 diff
(99.0 %id)
CB117843 Liver .h 1 to 436 1 to 436 exact tiling clone,   436/436
(100 %)
0 diff
(100 %id)
BM850803 stomach .i 1 to 550 1 to 550 exact tiling clone,   550/550
(100 %)
1 diff
(99.9 %id)
DA949526 Spleen .j 1 to 553 2 to 557   tiling clone, capped   556/556
(100 %)
3 diff
(99.5 %id)
BF195100 fibrotheoma, ovary .j 224 to 695 472 to 1   tiling clone,   472/472
(100 %)
3 diff
(99.4 %id)
DA653876   .j 269 to 740 2 to 475   capped   474/474
(100 %)
4 diff
(99.2 %id)
DA514848 brain .j 275 to 768 2 to 496   capped   495/495
(100 %)
2 diff
(99.6 %id)
DA010124 adrenal gland .j 278 to 772 2 to 497   tiling clone, capped   496/496
(100 %)
1 diff
(99.8 %id)
DA892220 rectum .j 278 to 731 2 to 455   capped   454/455
(99 %)
3 diff
(99.4 %id)
BE798984 lung, small cell carcinoma .j 678 to 1366 24 to 711 H81T Y82T L83W G84A E85S ... tiling clone,   688/830
(82 %)
13 diff
(98.5 %id)
BE798509 lung, small cell carcinoma .j 678 to 1365 27 to 713 H104Q tiling clone, AAA   687/713
(96 %)
7 diff
(99.1 %id)
DA238048 brain .k-u 1 to 581 2 to 582   tiling clone, capped   581/581
(100 %)
0 diff
(100 %id)
DA818655   .k-u 23 to 395 2 to 374   capped   373/373
(100 %)
0 diff
(100 %id)
DA060904 cerebellum .k-u 31 to 584 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA994032 synovial membrane tissue from rheumatioidarthritis .k-u 31 to 573 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DA385206 thalamus .k-u 46 to 615 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
AW295632   .k-u 89 to 530 442 to 1       442/442
(100 %)
1 diff
(99.8 %id)
AI383845 B-cell, chronic lymphotic leukemia .k-u 209 to 531 324 to 1       324/325
(99 %)
2 diff
(99.4 %id)
BM040966 Kidney, Wilms' tumor, cell line .k-u 431 to 1162 20 to 764 E12A C13V N14Q G15W S16L ... tiling clone, available from MGC,   745/775
(96 %)
9 diff
(98.9 %id)
BQ082301 Ascites, stomach .l 1 to 332 9 to 341 Q2H tiling clone,   333/341
(97 %)
10 diff
(97.1 %id)
F29610 pectoral muscle (after mastectomy) .m 1 to 249 1 to 248 R10G R11G L12* tiling clone,   248/248
(100 %)
1 diff
(99.6 %id)
AA367401.
matches multiple genes
Pancreas P4.a-u 133 to 359 104 to 329     also hits gene RPS15P4 329/329
(100 %)
5 diff
(98.5 %id)
BQ371639.
matches multiple genes
prostate_normal P4.a-u 133 to 398 270 to 5     also hits gene RPS15P4 351/355
(98 %)
1 diff
(99.8 %id)
BQ374768.
matches multiple genes
testis_normal P4.a-u 133 to 471 350 to 12     also hits gene RPS15P4 427/438
(97 %)
1 diff
(99.8 %id)
CV355500.
matches multiple genes
heart_neonatal P4.a-u 133 to 404 328 to 57     Submitted on the opposite strand, also hits gene RPS15P4 353/427
(82 %)
2 diff
(99.6 %id)
AA514900.
matches multiple genes
Prostate P4.a-u 133 to 506 371 to 1     also hits gene RPS15P4 475/475
(100 %)
16 diff
(96.7 %id)
BG683888.
matches multiple genes
brain, neuroblastoma, cell line P4.a-u 133 to 453 321 to 1     also hits gene RPS15P4 422/423
(99 %)
5 diff
(98.9 %id)
BU075575.
matches multiple genes
insulinoma, Pancreas P4.a-u 133 to 503 390 to 20   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base), also hits gene RPS15P4 466/466
(100 %)
4 diff
(99.2 %id)
BU579872.
matches multiple genes
insulinoma, Pancreas P4.a-u 133 to 500 375 to 8     Submitted on the opposite strand, also hits gene RPS15P4 457/464
(98 %)
2 diff
(99.6 %id)
BU782599.
matches multiple genes
insulinoma, Pancreas P4.a-u 133 to 519 387 to 1     also hits gene RPS15P4 462/465
(99 %)
5 diff
(99.0 %id)
BU787404.
matches multiple genes
insulinoma, Pancreas P4.a-u 133 to 519 387 to 1     also hits gene RPS15P4 455/456
(99 %)
6 diff
(98.7 %id)
BU789554.
matches multiple genes
insulinoma, Pancreas P4.a-u 133 to 503 389 to 19   AAA Possibly primed on the genome, locally A rich (17/17 A in genome downstream of last aligned base), also hits gene RPS15P4 466/466
(100 %)
4 diff
(99.2 %id)
AU149662.
matches multiple genes
  P4.a-u 133 to 503 371 to 1     also hits gene RPS15P4 477/492
(96 %)
10 diff
(98.0 %id)
BU738242.
matches multiple genes
eye, lens P4.a-u 133 to 520 389 to 2     also hits gene RPS15P4 466/476
(97 %)
1 diff
(99.8 %id)
EC527245.
matches multiple genes
Prostate P4.a-u 135 to 218 84 to 1     also hits gene RPS15P4 84/84
(100 %)
0 diff
(100 %id)
EC545675.
matches multiple genes
Prostate P4.a-u 159 to 240 15 to 94     also hits gene RPS15P4 80/94
(85 %)
6 diff
(93.7 %id)
BQ344085.
matches multiple genes
nervous_tumor P4.a-u 209 to 454 264 to 21   tiling clone, also hits gene RPS15P4 244/264
(92 %)
0 diff
(100 %id)
AA160779.
matches multiple genes
Pancreas P4.a-u 220 to 507 287 to 1     also hits gene RPS15P4 287/287
(100 %)
6 diff
(98.0 %id)
BU727765.
matches multiple genes
eye, eye anterior segment P4.a-u 228 to 520 294 to 2     also hits gene RPS15P4 293/294
(99 %)
0 diff
(100 %id)
BM893648.
matches multiple genes
Islets of Langerhans, Pancreas P4.a-u 246 to 517 272 to 1     also hits gene RPS15P4 272/272
(100 %)
3 diff
(98.9 %id)
EC545244.
matches multiple genes
Prostate P4.a-u 253 to 353 1 to 101     also hits gene RPS15P4 101/101
(100 %)
0 diff
(100 %id)
EC575484.
matches multiple genes
Prostate P4.a-u 256 to 353 7 to 103     also hits gene RPS15P4 97/103
(94 %)
6 diff
(94.2 %id)
EC536035.
matches multiple genes
Prostate P4.a-u 260 to 358 1 to 97     also hits gene RPS15P4 97/97
(100 %)
2 diff
(98.0 %id)
AA335253.
matches multiple genes
epididymis P4.a-u 261 to 502 241 to 1     Submitted on the opposite strand, also hits gene RPS15P4 241/241
(100 %)
2 diff
(99.2 %id)
BQ333935.
matches multiple genes
marrow P4.a-u 291 to 476 204 to 18     also hits gene RPS15P4 187/233
(80 %)
0 diff
(100 %id)
BE697701.
matches multiple genes
colon P4.a-u 294 to 467 173 to 1     also hits gene RPS15P4 173/173
(100 %)
8 diff
(95.4 %id)
BQ333958.
matches multiple genes
marrow P4.a-u 294 to 471 188 to 12     also hits gene RPS15P4 177/188
(94 %)
0 diff
(100 %id)
EC498733.
matches multiple genes
Prostate P4.a-u 414 to 496 1 to 83     also hits gene RPS15P4 83/92
(90 %)
3 diff
(96.8 %id)
BQ333933 marrow Gene RPS15, variant not shown         This clone was ignored    
EC530162 Prostate Gene RPS15, variant not shown         Suspected internal deletion, this clone was ignored    
AA493540 Prostate Gene RPS15, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI