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Gene RUNDC3ATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
240 supporting clones for gene RUNDC3A back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA352607 substantia nigra .a 1 to 322 2 to 324   tiling clone, capped   323/323
(100 %)
1 diff
(99.7 %id)
DA162831 amygdala .a 193 to 693 2 to 503   capped   502/502
(100 %)
3 diff
(99.5 %id)
DA169149 amygdala .a 208 to 693 2 to 487   tiling clone, capped   486/486
(100 %)
0 diff
(100 %id)
NM_001144825.1   .a 641 to 2687 1 to 2047 exact RefSeq,   2047/2047
(100 %)
0 diff
(100 %id)
AB209802 brain .a 657 to 2688 1 to 2032 exact tiling clone,   2032/2032
(100 %)
0 diff
(100 %id)
TI_1948126182   .a 915 to 1493 129 to 707   fully sequenced,   579/707
(81 %)
6 diff
(99.2 %id)
TI_1948126328   .a 915 to 1574 134 to 792   fully sequenced,   659/792
(83 %)
6 diff
(99.3 %id)
TI_1948126480   .a 915 to 1518 135 to 738   fully sequenced,   604/738
(81 %)
6 diff
(99.2 %id)
TI_1948126626   .a 915 to 1574 139 to 798   fully sequenced,   660/798
(82 %)
6 diff
(99.3 %id)
TI_57198443   .a 1248 to 2064 34 to 849       816/851
(95 %)
11 diff
(98.8 %id)
BI820972 pooled brain, lung, testis .a 1250 to 2064 1 to 814       814/816
(99 %)
5 diff
(99.4 %id)
TI_1948126183   .a 1432 to 2120 825 to 136   fully sequenced,   690/825
(83 %)
1 diff
(99.9 %id)
BI767993 pooled lung and spleen .a 1443 to 2266 1 to 829       829/931
(89 %)
11 diff
(98.9 %id)
TI_57184233   .a 1443 to 2266 29 to 857       829/959
(86 %)
19 diff
(98.1 %id)
CD251401 brain, Pituitary .a 1478 to 2291 1 to 814       814/814
(100 %)
4 diff
(99.6 %id)
TI_1948126481   .a 1488 to 2120 766 to 135   fully sequenced,   632/766
(82 %)
1 diff
(99.9 %id)
BG912303 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1493 to 2248 1 to 756       756/757
(99 %)
10 diff
(98.7 %id)
TI_1948126329   .a 1513 to 2120 740 to 134   fully sequenced,   607/740
(82 %)
1 diff
(99.9 %id)
TI_1948126627   .a 1513 to 2120 744 to 138   fully sequenced,   607/744
(81 %)
1 diff
(99.9 %id)
CA488531   .a 1556 to 2402 1 to 853       853/888
(96 %)
19 diff
(97.9 %id)
BG740621 skin .a 1737 to 2592 1 to 861       861/861
(100 %)
18 diff
(98.0 %id)
BF528631 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1774 to 2539 1 to 762       762/1016
(75 %)
17 diff
(98.4 %id)
BC013240 Brain, anaplastic oligodendroglioma with1p/19q loss .a 1774 to 2686 1 to 913   available from MGC, AAA   913/913
(100 %)
0 diff
(100 %id)
DN991199 brain, whole brain .a 1784 to 2370 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
AA323161 brain, cerebellum .a 1821 to 2121 1 to 300       300/300
(100 %)
1 diff
(99.7 %id)
CN345244 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1855 to 2613 1 to 760       760/760
(100 %)
1 diff
(99.9 %id)
BF931026 nervous_tumor .a 1911 to 2314 404 to 1     Submitted on the opposite strand 404/404
(100 %)
9 diff
(97.8 %id)
BF528757 anaplastic oligodendroglioma with 1p/19qloss, brain .a 1925 to 2248 123 to 442       320/442
(72 %)
8 diff
(98.2 %id)
BF931025 nervous_tumor .a 1942 to 2314 374 to 1     Submitted on the opposite strand 374/374
(100 %)
6 diff
(98.4 %id)
H23638 brain .a 1960 to 2365 1 to 406       406/407
(99 %)
18 diff
(95.6 %id)
H22425 brain .a 1988 to 2392 1 to 410       410/411
(99 %)
16 diff
(96.2 %id)
BF528741 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2002 to 2687 1 to 682   AAA   682/682
(100 %)
13 diff
(98.1 %id)
AI197870 anaplastic oligodendroglioma, brain .a 2065 to 2686 629 to 12   AAA   618/620
(99 %)
14 diff
(97.8 %id)
BF529666 anaplastic oligodendroglioma with 1p/19qloss, brain .a 2089 to 2684 1 to 595       595/651
(91 %)
4 diff
(99.4 %id)
AL520447 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1 to 920 1 to 911   tiling clone,   911/970
(93 %)
14 diff
(98.6 %id)
AL522962 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1 to 839 1 to 838   tiling clone,   838/838
(100 %)
2 diff
(99.8 %id)
AL520446 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 983 to 1933 960 to 12   tiling clone,   949/1061
(89 %)
12 diff
(98.9 %id)
AL522961 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1039 to 1943 904 to 1   tiling clone,   904/904
(100 %)
1 diff
(99.9 %id)
AL527759 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 1 to 952 1 to 954   tiling clone,   954/954
(100 %)
12 diff
(98.8 %id)
AL527758 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .c 1032 to 1899 866 to 1   tiling clone,   866/866
(100 %)
8 diff
(99.1 %id)
NM_006695.4   .d 1 to 1857 1 to 1857 exact RefSeq, AAA   1857/1857
(100 %)
0 diff
(100 %id)
BC006194 Lung, small cell carcinoma .d 38 to 1857 1 to 1820 exact tiling clone, available from MGC, AAA   1820/1820
(100 %)
2 diff
(99.9 %id)
BE206840 lung, small cell carcinoma .d 39 to 688 1 to 650       648/650
(99 %)
12 diff
(98.2 %id)
AK313669 caudate nucleus .d 80 to 1492 1 to 1413 exact tiling clone,   1413/1413
(100 %)
0 diff
(100 %id)
AF055026 brain .d 237 to 1843 1 to 1607 exact AAA   1607/1607
(100 %)
1 diff
(100.0 %id)
CR456748   .d 275 to 1491 1 to 1217       1217/1218
(99 %)
2 diff
(99.9 %id)
AW731989 lung, small cell carcinoma .d 1409 to 1858 455 to 6       450/455
(98 %)
2 diff
(99.6 %id)
DA293412 hippocampus .e 1 to 542 2 to 543   tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
TI_57200698   .e 363 to 1206 32 to 885       854/886
(96 %)
19 diff
(97.9 %id)
BI821545 pooled brain, lung, testis .e 367 to 1206 1 to 850       850/851
(99 %)
18 diff
(97.9 %id)
TI_44185101   .e 391 to 1159 31 to 797       767/797
(96 %)
7 diff
(99.2 %id)
BI522472 brain .e 392 to 1159 1 to 766       766/766
(100 %)
2 diff
(99.8 %id)
BX353645 Neuroblastoma Cot 25-normalized .e 400 to 1001 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
BQ109540 brain .e 402 to 1125 1 to 721       721/721
(100 %)
8 diff
(98.9 %id)
AL533546 adult brain, brain .e 406 to 1386 1 to 980       980/980
(100 %)
6 diff
(99.4 %id)
DA079719 cerebellum .e 411 to 992 2 to 583   capped   582/582
(100 %)
3 diff
(99.5 %id)
DA775653 brain .e 415 to 988 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
CR622819 adult brain .e 459 to 2911 1 to 2453 exact tiling clone,   2453/2453
(100 %)
0 diff
(100 %id)
AL533525 adult brain, brain .e 480 to 1276 19 to 814       796/814
(97 %)
7 diff
(99.2 %id)
BX445437 adult brain, brain .e 480 to 1226 21 to 767       747/929
(80 %)
21 diff
(97.8 %id)
DN991045 brain, whole brain .e 569 to 1212 1 to 644       644/644
(100 %)
5 diff
(99.3 %id)
BM466946 eye, retinoblastoma .e 659 to 1547 1 to 894       894/1080
(82 %)
27 diff
(97.5 %id)
BF347206 anaplastic oligodendroglioma with 1p/19qloss, brain .e 697 to 1502 1 to 801       799/804
(99 %)
35 diff
(95.7 %id)
BM544637 brain, hippocampus .e 935 to 1999 28 to 1102       1075/1104
(97 %)
15 diff
(98.7 %id)
BX452683 adult brain, brain .e 1143 to 2036 1 to 886       886/893
(99 %)
10 diff
(98.9 %id)
TI_57218914   .e 1149 to 2011 28 to 900       873/949
(91 %)
13 diff
(98.7 %id)
BI754035 brain .e 1156 to 2011 1 to 866       866/915
(94 %)
8 diff
(99.2 %id)
BY796093 eye .e 1329 to 1934 1 to 606       606/606
(100 %)
0 diff
(100 %id)
BX453770 adult brain, brain .e 1380 to 2272 890 to 2       889/940
(94 %)
22 diff
(97.7 %id)
BI523300 brain .e 1391 to 2118 737 to 1       737/738
(99 %)
20 diff
(97.3 %id)
TI_44185310   .e 1391 to 2118 737 to 1       737/738
(99 %)
20 diff
(97.3 %id)
DB539631 hippocampus .e 1697 to 2163 1 to 467     Submitted on the opposite strand 467/467
(100 %)
0 diff
(100 %id)
DB553973 hypothalamus .e 1720 to 2167 1 to 449     Submitted on the opposite strand 449/449
(100 %)
10 diff
(97.8 %id)
AI352391 pooled germ cell tumors .e 1723 to 2178 462 to 8       455/483
(94 %)
3 diff
(99.4 %id)
DB547533 hippocampus .e 1725 to 2168 1 to 443     Submitted on the opposite strand 443/443
(100 %)
1 diff
(99.8 %id)
AA770038 liver and spleen .e 1741 to 2163 423 to 1       423/423
(100 %)
1 diff
(99.8 %id)
AW590597 pooled germ cell tumors .e 1757 to 2178 429 to 8       422/429
(98 %)
2 diff
(99.6 %id)
AA703627 liver and spleen .e 1777 to 2157 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AW970085   .e 1806 to 2171 54 to 419   AAA   366/419
(87 %)
6 diff
(98.6 %id)
AW137933   .e 1814 to 2165 369 to 18   AAA   352/352
(100 %)
6 diff
(98.3 %id)
AA482958 alveolar rhabdomyosarcoma .e 1822 to 2172 352 to 3       350/353
(99 %)
0 diff
(100 %id)
AW970075   .e 1826 to 2171 76 to 421   AAA   346/421
(82 %)
8 diff
(98.1 %id)
DB536174 hippocampus .e 1844 to 2175 1 to 332     Submitted on the opposite strand 332/334
(99 %)
7 diff
(98.0 %id)
D52575 brain .e 1851 to 2167 44 to 360   fully sequenced,   317/360
(88 %)
6 diff
(98.4 %id)
Z40856 brain, total brain .e 1856 to 2163 308 to 1       308/308
(100 %)
0 diff
(100 %id)
D80530 brain .e 1897 to 2167 271 to 1   fully sequenced,   271/271
(100 %)
0 diff
(100 %id)
BX445436 adult brain, brain .e 1924 to 2928 1042 to 42   AAA   1001/1025
(97 %)
0 diff
(100 %id)
BF509170   .e 1925 to 2139 1 to 214     Submitted on the opposite strand 214/224
(95 %)
8 diff
(96.5 %id)
F02435 brain, total brain .e 1937 to 2163 227 to 1       227/227
(100 %)
0 diff
(100 %id)
AI680928 carcinoid, lung .e 1940 to 2127 1 to 188     Submitted on the opposite strand 188/188
(100 %)
3 diff
(98.5 %id)
AI703271 carcinoid, lung .e 1941 to 2122 1 to 182     Submitted on the opposite strand 182/182
(100 %)
1 diff
(99.5 %id)
AI692281 carcinoid, lung .e 1943 to 2106 1 to 164     Submitted on the opposite strand 164/164
(100 %)
0 diff
(100 %id)
AA996267 carcinoid, lung .e 1945 to 2150 1 to 206     Submitted on the opposite strand 206/206
(100 %)
4 diff
(98.1 %id)
C21254   .e 1971 to 2191 1 to 221       221/221
(100 %)
0 diff
(100 %id)
AA683172   .e 1990 to 2162 174 to 1       174/174
(100 %)
1 diff
(99.5 %id)
AL533480 adult brain, brain .e 2108 to 2911 804 to 1       804/804
(100 %)
5 diff
(99.4 %id)
DT221002 brain .e 2112 to 2730 1 to 619       619/619
(100 %)
0 diff
(100 %id)
BG818028 anaplastic oligodendroglioma with 1p/19qloss, brain .e 2125 to 2815 1 to 694       694/694
(100 %)
11 diff
(98.5 %id)
BG818220 anaplastic oligodendroglioma with 1p/19qloss, brain .e 2125 to 2975 1 to 844       844/878
(96 %)
21 diff
(97.7 %id)
BG911199 anaplastic oligodendroglioma with 1p/19qloss, brain .e 2431 to 2977 1 to 544   AAA   544/544
(100 %)
5 diff
(99.1 %id)
AI681369 carcinoid, lung .e 2469 to 2978 516 to 6       511/516
(99 %)
0 diff
(100 %id)
H50370 brain .e 2471 to 2762 1 to 295   fully sequenced,   295/295
(100 %)
7 diff
(97.7 %id)
BP391114 pancreatic islet .e 2494 to 2978 1 to 485   tiling clone, Submitted on the opposite strand 485/487
(99 %)
1 diff
(99.8 %id)
BG060153 brain, glioblastoma without EGFR amplification .e 2499 to 2977 490 to 12   AAA   479/479
(100 %)
3 diff
(99.4 %id)
BM692604 eye, human retina .e 2515 to 2977 1 to 463   AAA   463/463
(100 %)
0 diff
(100 %id)
DB544486 hippocampus .e 2520 to 2977 1 to 459     Submitted on the opposite strand 459/459
(100 %)
8 diff
(98.3 %id)
AW250954 lung, small cell carcinoma .e 2520 to 2977 468 to 11   AAA   458/458
(100 %)
8 diff
(98.3 %id)
BU147406 dorsal root ganglia .e 2574 to 2977 1 to 407   AAA   407/407
(100 %)
4 diff
(99.1 %id)
AA633688   .e 2579 to 2956 379 to 1       379/379
(100 %)
6 diff
(98.5 %id)
BP387263 pancreatic islet .e 2592 to 2828 237 to 1       237/361
(65 %)
0 diff
(100 %id)
AA677938 liver and spleen .e 2593 to 2977 382 to 1       382/382
(100 %)
4 diff
(99.0 %id)
EB388659 eye, optic nerve .e 2597 to 2977 1 to 381   AAA   381/381
(100 %)
0 diff
(100 %id)
BM988279 mixed .e 2598 to 2977 398 to 19   AAA   380/380
(100 %)
1 diff
(99.8 %id)
R51076 whole brain .e 2613 to 2977 380 to 14   AAA   367/368
(99 %)
9 diff
(97.6 %id)
T51502 fetal spleen, Spleen .e 2613 to 2978 369 to 2       368/369
(99 %)
0 diff
(100 %id)
BP385803 pancreatic islet .e 2623 to 2953 1 to 331     Submitted on the opposite strand 331/331
(100 %)
0 diff
(100 %id)
CA942250 Pancreas, Purified pancreatic islet .e 2655 to 2977 1 to 323   fully sequenced, AAA   323/323
(100 %)
4 diff
(98.8 %id)
AI652948 pooled germ cell tumors .e 2673 to 2977 305 to 1       305/305
(100 %)
1 diff
(99.7 %id)
AI570685 anaplastic oligodendroglioma, brain .e 2697 to 2978 288 to 7       282/288
(97 %)
0 diff
(100 %id)
T17040   .e 2697 to 2970 274 to 8       267/277
(96 %)
0 diff
(100 %id)
CA844039 Pancreas, Purified pancreatic islet .e 2698 to 2976 279 to 1   fully sequenced,   279/279
(100 %)
0 diff
(100 %id)
T34913 brain .e 2712 to 2941 1 to 230       230/230
(100 %)
1 diff
(99.6 %id)
AW955730   .e 2713 to 2977 1 to 265   AAA   265/265
(100 %)
0 diff
(100 %id)
H50339 brain .e 2732 to 2945 218 to 1   fully sequenced,   218/218
(100 %)
2 diff
(99.1 %id)
H40548 brain .e 2737 to 2973 241 to 5       237/241
(98 %)
0 diff
(100 %id)
BF438480 brain, glioblastoma (pooled) .e 2790 to 2974 185 to 1       185/185
(100 %)
1 diff
(99.5 %id)
DR977605 brain .e 2806 to 2978 1 to 172     Submitted on the opposite strand 172/181
(95 %)
4 diff
(97.8 %id)
AW089531 brain, tumor, 5 pooled (see description) .e 2857 to 2978 123 to 2       122/123
(99 %)
0 diff
(100 %id)
BF447508 sympathetic trunk .e 2865 to 2978 114 to 1       114/115
(99 %)
0 diff
(100 %id)
AW273589 lung, two pooled squamous cell carcinomas .e 2879 to 2977 99 to 1       99/99
(100 %)
0 diff
(100 %id)
NM_001144826.1   .f 1 to 1842 1 to 1842 exact RefSeq, AAA   1842/1842
(100 %)
0 diff
(100 %id)
BI601151 brain, hypothalamus .f 20 to 713 1 to 694       694/697
(99 %)
7 diff
(99.0 %id)
AK226045 cerebellum .f 25 to 1828 1 to 1803 Q379L tiling clone, AAA   1803/1803
(100 %)
3 diff
(99.9 %id)
BP208555 cerebellum .f 25 to 606 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DB504910 hypothalamus .f 25 to 503 1 to 479       479/479
(100 %)
2 diff
(99.6 %id)
TI_45214275   .f 25 to 713 89 to 777       689/780
(88 %)
7 diff
(99.2 %id)
DB478869 hippocampus .f 30 to 525 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
DA139777 alzheimer cortex .f 54 to 624 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA170146 amygdala .f 54 to 618 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BP202435 amygdala .f 64 to 646 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA343866 substantia nigra .f 82 to 656 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA607904   .f 83 to 701 2 to 620   capped   619/619
(100 %)
1 diff
(99.9 %id)
DA072363 cerebellum .f 84 to 648 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA351750 substantia nigra .f 84 to 631 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA367253 subthalamic nucleus .f 84 to 670 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
BX537443 human cerebellum .f 104 to 1828 1 to 1725 M129V tiling clone, available from DKFZ, AAA   1725/1725
(100 %)
2 diff
(99.9 %id)
DB172813 kidney, tumor tissue .f 152 to 733 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
TI_57221585   .f 244 to 1116 65 to 939       875/941
(92 %)
16 diff
(98.3 %id)
BI757278 brain .f 251 to 1116 1 to 869       869/871
(99 %)
10 diff
(98.9 %id)
DA513661 brain .f 256 to 814 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
F08403 brain, total brain .f 264 to 525 1 to 261       261/261
(100 %)
1 diff
(99.7 %id)
BI552408 brain, hippocampus .f 273 to 1055 1 to 795       795/796
(99 %)
23 diff
(97.2 %id)
U93871   .f 275 to 1829 1 to 1555 exact     1555/1559
(99 %)
7 diff
(99.6 %id)
TI_44170965   .f 277 to 1055 123 to 913       791/914
(86 %)
27 diff
(97.1 %id)
BF530718 anaplastic oligodendroglioma with 1p/19qloss, brain .f 385 to 1055 1 to 668       668/675
(98 %)
4 diff
(99.5 %id)
F12534 brain, total brain .f 488 to 817 1 to 330       330/330
(100 %)
1 diff
(99.7 %id)
F10154 brain, total brain .f 1504 to 1836 333 to 1       333/333
(100 %)
0 diff
(100 %id)
F04620 brain, total brain .f 1617 to 1828 212 to 1       212/212
(100 %)
0 diff
(100 %id)
AL133657 testis .g 1 to 2372 1 to 2372 exact tiling clone, available from DKFZ, AAA   2372/2372
(100 %)
0 diff
(100 %id)
AL043463 testis .g 1 to 520 1 to 520       520/520
(100 %)
0 diff
(100 %id)
DA299778 hippocampus .g 148 to 681 2 to 535   capped   534/534
(100 %)
0 diff
(100 %id)
TI_44169355   .g 162 to 965 118 to 924       807/996
(81 %)
12 diff
(98.8 %id)
DB475669 hippocampus .g 169 to 632 1 to 464       464/464
(100 %)
3 diff
(99.4 %id)
BI547374 brain, hippocampus .g 169 to 726 1 to 576       543/1005
(54 %)
80 diff
(92.1 %id)
BI549532 brain, hippocampus .g 171 to 965 6 to 803       798/875
(91 %)
12 diff
(98.7 %id)
DA141190 alzheimer cortex .g 172 to 736 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB485163 hypothalamus .g 172 to 624 1 to 451       451/451
(100 %)
3 diff
(99.4 %id)
BP307408 brain .g 175 to 756 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BG910377 anaplastic oligodendroglioma with 1p/19qloss, brain .g 179 to 939 1 to 760       760/760
(100 %)
1 diff
(99.9 %id)
BG910444 anaplastic oligodendroglioma with 1p/19qloss, brain .g 180 to 924 1 to 759       759/883
(85 %)
23 diff
(97.4 %id)
AW631487 2 pooled high-grade transitional celltumors, genitourinary tract .g 186 to 388 1 to 203       203/203
(100 %)
0 diff
(100 %id)
BI913595 brain .g 194 to 1050 1 to 860       858/954
(89 %)
15 diff
(98.5 %id)
TI_57241491   .g 194 to 1050 31 to 890       858/984
(87 %)
20 diff
(98.0 %id)
BP308596 brain .g 199 to 779 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BP211517 cerebrum .g 202 to 645 1 to 444       444/585
(75 %)
3 diff
(99.5 %id)
BQ424069 eye, retinoblastoma .g 202 to 966 1 to 770       770/916
(84 %)
9 diff
(99.1 %id)
DA360295 subthalamic nucleus .g 203 to 776 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA355893 subthalamic nucleus .g 219 to 638 2 to 421   capped   420/420
(100 %)
1 diff
(99.8 %id)
BX425461 neuroblastoma .g 223 to 1078 1 to 855       855/855
(100 %)
23 diff
(97.4 %id)
BI596948 brain, hypothalamus .g 224 to 878 2 to 657       656/1020
(64 %)
6 diff
(99.5 %id)
TI_45208855   .g 224 to 878 84 to 739       656/1102
(59 %)
6 diff
(99.5 %id)
BP211788 cerebrum .g 226 to 799 1 to 574       574/597
(96 %)
16 diff
(97.4 %id)
DA265552 caudate nucleus .g 227 to 778 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA693494   .g 227 to 807 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
DA774013 brain .g 227 to 807 2 to 584   capped   583/583
(100 %)
3 diff
(99.5 %id)
BP212282 cerebrum .g 229 to 804 1 to 577       577/578
(99 %)
6 diff
(99.0 %id)
BP213679 cerebrum .g 229 to 806 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BP213953 cerebrum .g 229 to 807 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DB468748 hippocampus .g 229 to 670 1 to 442       442/442
(100 %)
3 diff
(99.4 %id)
DB470993 hippocampus .g 229 to 651 1 to 424       424/501
(84 %)
16 diff
(96.9 %id)
DA074674 cerebellum .g 230 to 796 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA080583 cerebellum .g 230 to 756 2 to 529   capped   528/528
(100 %)
1 diff
(99.9 %id)
DA209976 brain .g 230 to 786 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DA357505 subthalamic nucleus .g 230 to 788 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BM922170 pooled brain, lung, testis .g 230 to 1048 1 to 824       824/1066
(77 %)
16 diff
(98.5 %id)
DA772713 brain .g 234 to 809 8 to 583   capped   576/576
(100 %)
0 diff
(100 %id)
BI919245 brain .g 238 to 1031 22 to 834       813/834
(97 %)
24 diff
(97.2 %id)
TI_57243785   .g 238 to 1031 22 to 834       813/834
(97 %)
24 diff
(97.2 %id)
BX393574 Neuroblastoma Cot 10-normalized .g 257 to 1049 1 to 791       791/791
(100 %)
4 diff
(99.5 %id)
BM474755 eye, retinoblastoma .g 269 to 877 1 to 606       606/1109
(54 %)
16 diff
(98.6 %id)
BQ927187 carcinoma, cell line, Prostate .g 315 to 799 62 to 545       484/946
(51 %)
33 diff
(96.6 %id)
TI_44185416   .g 377 to 1148 28 to 800       773/801
(96 %)
8 diff
(99.1 %id)
BI522630 brain .g 382 to 1148 1 to 768       768/769
(99 %)
2 diff
(99.8 %id)
BG820322 anaplastic oligodendroglioma with 1p/19qloss, brain .g 383 to 1111 1 to 728       728/728
(100 %)
1 diff
(99.9 %id)
Z45123 brain, total brain .g 418 to 729 1 to 311       311/311
(100 %)
1 diff
(99.7 %id)
CV026502 mixed .g 421 to 1048 1 to 627       627/627
(100 %)
1 diff
(99.9 %id)
R87923 brain .g 436 to 731 1 to 297       295/302
(97 %)
7 diff
(97.7 %id)
H38507 brain .g 444 to 793 1 to 353       353/372
(94 %)
4 diff
(99.0 %id)
DT220190 brain .g 455 to 1045 1 to 591       591/591
(100 %)
2 diff
(99.7 %id)
BG913382 anaplastic oligodendroglioma with 1p/19qloss, brain .g 501 to 1216 1 to 718       718/903
(79 %)
9 diff
(99.1 %id)
T30979 brain .g 518 to 833 1 to 315       315/315
(100 %)
6 diff
(98.1 %id)
AV728115 hypothalamus .g 629 to 1373 1 to 744       744/746
(99 %)
16 diff
(97.9 %id)
T74143 whole brain .g 658 to 1040 1 to 382       382/383
(99 %)
20 diff
(94.8 %id)
DA157444 amygdala .g 673 to 1225 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA207976 brain .g 673 to 1243 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
T17041   .g 725 to 1049 9 to 332       324/340
(95 %)
5 diff
(98.6 %id)
DA166010 amygdala .g 728 to 1288 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
BF528272 anaplastic oligodendroglioma with 1p/19qloss, brain .g 772 to 1386 35 to 664       628/664
(94 %)
22 diff
(96.7 %id)
AW955173   .g 784 to 1346 1 to 565       565/627
(90 %)
8 diff
(98.8 %id)
TI_57219553   .g 784 to 1509 27 to 775       747/841
(88 %)
39 diff
(95.4 %id)
BI752717 brain .g 787 to 1509 1 to 746       744/812
(91 %)
39 diff
(95.2 %id)
AA323808 brain, cerebellum .g 791 to 1114 9 to 332       324/333
(97 %)
8 diff
(97.6 %id)
BF963577 nervous_normal .g 884 to 1417 541 to 5       537/542
(99 %)
17 diff
(96.9 %id)
BI034604 nervous_normal .g 884 to 1417 541 to 5       537/542
(99 %)
17 diff
(96.9 %id)
CD106206 brain, Pituitary .g 890 to 1425 1 to 538       538/870
(61 %)
8 diff
(99.1 %id)
H14157 brain .g 898 to 1256 1 to 362       362/405
(89 %)
5 diff
(98.8 %id)
R86861 brain .g 900 to 1242 13 to 359       347/359
(96 %)
9 diff
(97.5 %id)
BF960524 nervous_normal .g 937 to 1183 1 to 251       251/253
(99 %)
14 diff
(94.5 %id)
BF958868 nervous_normal .g 938 to 1416 507 to 30       478/509
(93 %)
9 diff
(98.3 %id)
Z45828 brain, total brain .g 978 to 1238 1 to 260       260/260
(100 %)
1 diff
(99.7 %id)
BE700048 nervous_normal .g 1168 to 1266 116 to 20       97/120
(80 %)
0 diff
(100 %id)
BU071650 insulinoma, Pancreas .g 1306 to 1442 1 to 137       137/137
(100 %)
0 diff
(100 %id)
R85143 brain .g 1503 to 1611 1 to 106       106/106
(100 %)
3 diff
(97.2 %id)
BU071414 insulinoma, Pancreas .g 1818 to 2358 541 to 1       541/541
(100 %)
2 diff
(99.7 %id)
AA364659 pineal body .g 1902 to 2114 1 to 213       213/213
(100 %)
2 diff
(99.1 %id)
Z41459 brain, total brain .g 2090 to 2372 283 to 1       283/283
(100 %)
0 diff
(100 %id)
AK123330 amygdala .h 1 to 3685 2 to 3686 S82P tiling clone, available from FLJ,   3686/3686
(100 %)
2 diff
(100.0 %id)
DA182852 amygdala .h 1 to 563 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BG818547 anaplastic oligodendroglioma with 1p/19qloss, brain .h 1929 to 2561 1 to 636       636/636
(100 %)
9 diff
(98.6 %id)
DB302973 amygdala .h 3193 to 3685 493 to 1       493/493
(100 %)
1 diff
(99.8 %id)
BF528961 anaplastic oligodendroglioma with 1p/19qloss, brain .i 1 to 339 1 to 340 E8D A9G A10G A11G Q12A ... tiling clone,   825/957
(86 %)
57 diff
(94.1 %id)
BM714421 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j 1 to 646 1 to 646 M66I tiling clone, fully sequenced,   646/646
(100 %)
1 diff
(99.9 %id)
BM675216 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j 264 to 652 407 to 19   tiling clone, fully sequenced, AAA   389/389
(100 %)
1 diff
(99.8 %id)
DA073536 cerebellum .k 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
DA526270 brain .l 1 to 524 2 to 524   tiling clone, capped   523/523
(100 %)
1 diff
(99.9 %id)
DA532580 brain .m 1 to 452 2 to 453 exact tiling clone, capped   452/458
(98 %)
1 diff
(99.8 %id)
AA025825 heart .n 1 to 441 1 to 445 W29G G30V I32S G33E K34X ... tiling clone, fully sequenced,   445/445
(100 %)
23 diff
(94.9 %id)
BF345332 anaplastic oligodendroglioma with 1p/19qloss, brain .n 62 to 800 1 to 729 exact tiling clone,   729/766
(95 %)
16 diff
(98.0 %id)
BF346805 anaplastic oligodendroglioma with 1p/19qloss, brain .n 63 to 806 1 to 731 C64V L65P V66G S67E D68R ... AAA   731/734
(99 %)
19 diff
(97.5 %id)
AA025738 heart .n 411 to 808 404 to 1   tiling clone, fully sequenced,   404/404
(100 %)
7 diff
(98.3 %id)
DB576170 hypothalamus .o 1 to 494 1 to 494 C2Y S18I tiling clone, Submitted on the opposite strand 494/494
(100 %)
6 diff
(98.8 %id)
AA654126 epithelium (cell line), Prostate .p 1 to 422 424 to 3 W8C P9X tiling clone,   422/424
(99 %)
2 diff
(99.6 %id)
AW952373   Gene RUNDC3A, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BP209007 cerebellum Gene RUNDC3A, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BX413221 brain, fetal brain Gene RUNDC3A, variant not shown         This clone was ignored    
BX441366 brain, fetal brain Gene RUNDC3A, variant not shown         This clone was ignored    
BI196263 brain, neuroblastoma Gene RUNDC3A, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CD242525 brain, Pituitary Gene RUNDC3A, variant not shown         This clone was ignored    
DA800249 brain Gene RUNDC3A, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI