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Gene RPE65TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
29 supporting clones for gene RPE65 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX954093   .a 1 to 703 1 to 703   tiling clone,   703/703
(100 %)
1 diff
(99.9 %id)
NM_000329.2   .a 196 to 2803 1 to 2608 exact RefSeq,   2608/2608
(100 %)
0 diff
(100 %id)
U18991 retinal pigment epithelium .a 196 to 2865 1 to 2672 exact tiling clone,   2672/2672
(100 %)
3 diff
(99.9 %id)
BC075036 Fetal Brain, PCR rescued clones .a 201 to 1877 1 to 1677 exact available from MGC,   1677/1677
(100 %)
0 diff
(100 %id)
BC075035 Fetal Brain, PCR rescued clones .a 204 to 1878 1 to 1675 exact available from MGC,   1675/1675
(100 %)
0 diff
(100 %id)
AK289925 hippocampus .a 205 to 2232 1 to 2028 E254G N274D     2028/2028
(100 %)
4 diff
(99.9 %id)
DA293015 hippocampus .a 206 to 769 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DN992807 brain, whole brain .a 213 to 1001 1 to 788       786/788
(99 %)
8 diff
(99.0 %id)
CA393174 eye, RPE/choroid .a 218 to 617 1 to 400       400/400
(100 %)
0 diff
(100 %id)
CA397132 eye, RPE/choroid .a 219 to 842 1 to 624       624/624
(100 %)
0 diff
(100 %id)
EL947512 eyeball .a 220 to 793 1 to 575       575/575
(100 %)
5 diff
(99.2 %id)
BE762826 nervous_tumor .a 361 to 958 11 to 607       597/607
(98 %)
6 diff
(99.1 %id)
BM718135 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 428 to 662 1 to 235   fully sequenced,   235/235
(100 %)
1 diff
(99.6 %id)
BE936336 nervous_tumor .a 435 to 963 13 to 536       524/538
(97 %)
24 diff
(95.6 %id)
BU741775 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 534 to 662 151 to 23   fully sequenced,   129/151
(85 %)
0 diff
(100 %id)
AW293397   .a 883 to 1142 263 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 260/349
(74 %)
5 diff
(98.6 %id)
EL946016 eyeball .a 1301 to 1753 1 to 453       453/453
(100 %)
1 diff
(99.8 %id)
BM728042 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1403 to 2026 1 to 624   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 624/624
(100 %)
0 diff
(100 %id)
BX279594 brain, glioblastoma with EGFR amplification .a 1628 to 2116 1 to 489       489/489
(100 %)
0 diff
(100 %id)
BF337111 brain, glioblastoma with EGFR amplification .a 1628 to 2348 1 to 721       721/993
(72 %)
11 diff
(98.9 %id)
BQ186418 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1632 to 2026 1 to 395   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 395/395
(100 %)
0 diff
(100 %id)
TI_151730460   .a 1632 to 2026 475 to 81   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 395/969
(40 %)
0 diff
(100 %id)
BM680609 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1669 to 2026 376 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 358/358
(100 %)
0 diff
(100 %id)
BE041407 pooled .a 1699 to 1995 302 to 3       300/554
(54 %)
0 diff
(100 %id)
EL954387 eyeball .a 1765 to 2304 1 to 541       541/541
(100 %)
1 diff
(99.9 %id)
BM711385 eye, fetal eyes .a 1835 to 2181 1 to 347       347/347
(100 %)
0 diff
(100 %id)
BM716590 eye, fetal eyes .a 1835 to 2532 1 to 699       699/699
(100 %)
4 diff
(99.5 %id)
CK300947 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1848 to 2026 197 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 179/179
(100 %)
0 diff
(100 %id)
BU738143 eye, fetal eyes .a 2173 to 2803 645 to 13   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 633/633
(100 %)
7 diff
(98.9 %id)
BI480708 Native Retinal Pigment Epithelium sheets, retina .a 2244 to 2634 263 to 655       393/655
(60 %)
6 diff
(99.1 %id)
BM929818 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1 to 547 1 to 547   tiling clone, fully sequenced, Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 547/547
(100 %)
0 diff
(100 %id)
BM684260 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 486 to 903 435 to 16   tiling clone, fully sequenced, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 420/435
(96 %)
0 diff
(100 %id)
BP360146 thalamus .c 1 to 581 2 to 582 exact tiling clone,   582/582
(100 %)
1 diff
(99.9 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI