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Gene ROCK1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
402 supporting clones for gene ROCK1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM827305 stomach .a 1 to 562 1 to 562   tiling clone,   562/562
(100 %)
1 diff
(99.9 %id)
AK057038   .a 28 to 2905 1 to 2878   available from FLJ,   2878/2878
(100 %)
3 diff
(99.9 %id)
NM_005406.2   .a 29 to 6678 1 to 6650 exact RefSeq,   6650/6650
(100 %)
0 diff
(100 %id)
DA901388   .a 29 to 538 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DB480833 hippocampus .a 44 to 546 1 to 504       504/506
(99 %)
4 diff
(99.3 %id)
DB265884 uterus .a 71 to 643 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BX101499 2 pooled tumors (clear cell type), Kidney .a 74 to 504 1 to 431       431/431
(100 %)
0 diff
(100 %id)
DA120459 cerebellum .a 78 to 630 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB225818 trachea .a 78 to 633 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AI301107 2 pooled tumors (clear cell type), Kidney .a 79 to 488 410 to 1       410/410
(100 %)
0 diff
(100 %id)
DA806849 brain .a 79 to 635 2 to 558   capped   557/560
(99 %)
1 diff
(99.9 %id)
DB229030 trachea .a 82 to 671 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
AJ713662 bone marrow .a 88 to 487 16 to 414       399/414
(96 %)
9 diff
(97.9 %id)
DA022111   .a 88 to 651 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA855185 placenta .a 88 to 673 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DB205121 trachea .a 88 to 618 11 to 541   capped   531/540
(98 %)
6 diff
(98.9 %id)
DA121693 cerebellum .a 90 to 564 2 to 476   capped   475/475
(100 %)
0 diff
(100 %id)
DB214092 trachea .a 90 to 645 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
AI301871 2 pooled tumors (clear cell type), Kidney .a 107 to 479 373 to 1       373/373
(100 %)
0 diff
(100 %id)
AI300319 2 pooled tumors (clear cell type), Kidney .a 107 to 479 373 to 1       373/373
(100 %)
0 diff
(100 %id)
DA499558 brain .a 111 to 636 2 to 529   capped   528/528
(100 %)
2 diff
(99.7 %id)
DA029524   .a 112 to 672 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA032585   .a 112 to 663 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA499647 brain .a 114 to 680 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA993108 synovial membrane tissue from rheumatioidarthritis .a 117 to 647 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
DA595180 lung .a 121 to 468 2 to 349   capped   348/348
(100 %)
0 diff
(100 %id)
DA703006   .a 127 to 581 2 to 456   capped   455/455
(100 %)
0 diff
(100 %id)
AI760281 pooled .a 134 to 506 375 to 3       373/375
(99 %)
0 diff
(100 %id)
CN266681 embryonic stem cells, cell lines H1, H7, andH9 .a 140 to 727 1 to 588       588/588
(100 %)
2 diff
(99.7 %id)
DB287348 uterus .a 141 to 693 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA472642   .a 142 to 715 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA855042 placenta .a 142 to 685 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA956705 Spleen .a 142 to 646 2 to 506   capped   505/505
(100 %)
0 diff
(100 %id)
DB075891 testis .a 149 to 699 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA740897   .a 151 to 653 2 to 504   capped   503/503
(100 %)
0 diff
(100 %id)
DA590435 lung .a 153 to 721 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA262789 caudate nucleus .a 167 to 724 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA854580 placenta .a 176 to 749 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
AI492217 B-cell, chronic lymphotic leukemia .a 178 to 488 311 to 1       311/311
(100 %)
0 diff
(100 %id)
AW593068 pooled .a 188 to 424 237 to 1       237/237
(100 %)
0 diff
(100 %id)
AA167669   .a 191 to 750 1 to 546       546/546
(100 %)
30 diff
(94.6 %id)
DB239651 trachea .a 193 to 769 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA763856 tongue .a 200 to 774 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA861879 placenta .a 203 to 787 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DB243952 stomach, tumor tissue .a 203 to 598 2 to 397   capped   396/396
(100 %)
0 diff
(100 %id)
DA556998   .a 209 to 798 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
AW594257 pooled germ cell tumors .a 212 to 468 257 to 1       257/257
(100 %)
0 diff
(100 %id)
BE504619 pooled germ cell tumors .a 212 to 505 294 to 1       294/294
(100 %)
0 diff
(100 %id)
AK307388 hippocampus .a 214 to 3833 1 to 3620   tiling clone,   3620/3620
(100 %)
2 diff
(100.0 %id)
DC333770 hippocampus .a 214 to 780 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DA573953   .a 215 to 770 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AI831844 colon, colon tumor, RER+ .a 221 to 479 259 to 1       259/259
(100 %)
0 diff
(100 %id)
DA309941 hippocampus .a 239 to 713 2 to 480   capped   479/479
(100 %)
4 diff
(99.2 %id)
DA436479 tongue, tumor tissue .a 266 to 853 2 to 589   capped   588/588
(100 %)
2 diff
(99.7 %id)
DA553344   .a 280 to 844 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA140378 alzheimer cortex .a 350 to 910 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
AI797893 B-cell, chronic lymphotic leukemia .a 517 to 1089 1 to 573     Submitted on the opposite strand 573/573
(100 %)
0 diff
(100 %id)
AA837447 germinal center B cell .a 539 to 921 1 to 381       381/381
(100 %)
7 diff
(98.2 %id)
AA973042 pooled .a 539 to 1063 1 to 525     Submitted on the opposite strand 525/542
(96 %)
36 diff
(93.4 %id)
AI142762 pooled .a 539 to 790 1 to 248     Submitted on the opposite strand 248/248
(100 %)
3 diff
(98.8 %id)
AI093872 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 539 to 942 1 to 395     Submitted on the opposite strand 395/399
(98 %)
20 diff
(95.0 %id)
AI146533 brain, glioblastoma (pooled) .a 539 to 928 1 to 390     Submitted on the opposite strand 390/390
(100 %)
0 diff
(100 %id)
AI393719 pooled .a 539 to 1053 1 to 515     Submitted on the opposite strand 515/515
(100 %)
8 diff
(98.5 %id)
AI478903 pooled .a 539 to 1033 1 to 494     Submitted on the opposite strand 494/494
(100 %)
1 diff
(99.8 %id)
AW001831 Kidney .a 539 to 801 1 to 263     Submitted on the opposite strand 263/263
(100 %)
0 diff
(100 %id)
AW044182 pooled .a 539 to 934 1 to 395     Submitted on the opposite strand 395/395
(100 %)
1 diff
(99.8 %id)
AW612342 Kidney .a 539 to 1135 1 to 596     Submitted on the opposite strand 596/596
(100 %)
12 diff
(98.0 %id)
BE676068 B-cell, chronic lymphotic leukemia .a 539 to 977 1 to 439     Submitted on the opposite strand 439/439
(100 %)
0 diff
(100 %id)
BF109337 pooled .a 539 to 1104 1 to 566     Submitted on the opposite strand 566/566
(100 %)
4 diff
(99.3 %id)
AA743592 germinal center B cell .a 540 to 1032 1 to 491     Submitted on the opposite strand 491/491
(100 %)
20 diff
(96.0 %id)
AA805101 germinal center B cell .a 540 to 1038 1 to 496     Submitted on the opposite strand 496/496
(100 %)
11 diff
(97.8 %id)
R62623 placenta .a 553 to 870 1 to 318     Submitted on the opposite strand 318/322
(98 %)
10 diff
(96.9 %id)
R76530 placenta .a 553 to 730 1 to 176   fully sequenced, Submitted on the opposite strand 176/176
(100 %)
4 diff
(97.8 %id)
R76248 placenta .a 706 to 1158 455 to 1   fully sequenced, Submitted on the opposite strand 455/455
(100 %)
24 diff
(94.8 %id)
R62676 placenta .a 811 to 1220 419 to 1     Submitted on the opposite strand 419/463
(90 %)
17 diff
(96.4 %id)
BC113114 PCR rescued clones .a 968 to 5040 15 to 4087       4073/4097
(99 %)
19 diff
(99.6 %id)
U43195   .a 970 to 5034 1 to 4065 exact tiling clone,   4065/4065
(100 %)
0 diff
(100 %id)
DA094771 cerebellum .a 1097 to 1652 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BE814637 breast_normal .a 1104 to 1462 363 to 3       361/364
(99 %)
3 diff
(99.2 %id)
DA149189 amygdala .a 1143 to 1686 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
CN355352 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1157 to 1799 12 to 654       643/654
(98 %)
6 diff
(99.1 %id)
BX282065 embryonal carcinoma, cell line, testis .a 1187 to 1684 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
BM478829 embryonal carcinoma, cell line, testis .a 1187 to 1612 1 to 425       425/1342
(31 %)
6 diff
(99.6 %id)
BX480914   .a 1216 to 1596 1 to 381       381/381
(100 %)
2 diff
(99.5 %id)
CN355351 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1251 to 1803 12 to 563       552/563
(98 %)
7 diff
(98.8 %id)
BI002234 head_normal .a 1536 to 2020 499 to 15       483/519
(93 %)
16 diff
(97.0 %id)
BU929126 placenta .a 1543 to 2255 1 to 718       718/807
(88 %)
18 diff
(97.8 %id)
AL704810 human skeletal muscle .a 1546 to 1856 1 to 312       312/312
(100 %)
1 diff
(99.7 %id)
BE936563 nervous_tumor .a 1568 to 1705 1 to 137       137/142
(96 %)
17 diff
(88.1 %id)
CN355357 embryonic stem cells, DMSO-treated H9 cellline .a 1622 to 2240 1 to 620       620/620
(100 %)
4 diff
(99.4 %id)
CN355358 embryonic stem cells, DMSO-treated H9 cellline .a 1622 to 2210 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
AU117559 whole embryo, mainly head .a 1635 to 2504 2 to 875   capped Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 874/875
(99 %)
10 diff
(98.9 %id)
BF091813 testis_normal .a 1654 to 1813 160 to 1       160/163
(98 %)
3 diff
(98.2 %id)
CB044526 colon, juvenile granulosa tumor .a 1754 to 2391 11 to 648     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 638/648
(98 %)
6 diff
(99.1 %id)
CD677490 eye, Trabecular meshwork .a 1788 to 2416 1 to 629       629/629
(100 %)
0 diff
(100 %id)
BG290233 bladder, transitional cell papilloma, cell line .a 1889 to 2612 1 to 723       723/925
(78 %)
13 diff
(98.6 %id)
AB208965 brain .a 1943 to 4052 8 to 2117       2110/2117
(99 %)
6 diff
(99.8 %id)
BX644165   .a 1955 to 2522 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
BP335817 coronary artery .a 1955 to 2536 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE699763 nervous_normal .a 2016 to 2313 325 to 28       298/325
(91 %)
0 diff
(100 %id)
AA091003   .a 2021 to 2150 7 to 133       127/133
(95 %)
6 diff
(95.5 %id)
BP363564 lung .a 2087 to 2664 1 to 578       578/582
(99 %)
1 diff
(99.9 %id)
FN065264 breast carcinoma .a 2100 to 2188 96 to 8     Submitted on the opposite strand 89/97
(91 %)
0 diff
(100 %id)
BG109042 Bone, osteosarcoma, cell line .a 2155 to 2862 1 to 706       706/918
(76 %)
12 diff
(98.7 %id)
CR982983 T-Lymphocytes .a 2158 to 3077 1 to 913       913/913
(100 %)
19 diff
(98.0 %id)
BQ271409 Pancreas, Purified pancreatic islet .a 2174 to 2734 1 to 558       561/558
(100 %)
5 diff
(99.2 %id)
DB062694 testis .a 2174 to 2719 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BG110666 Bone, osteosarcoma, cell line .a 2195 to 2862 1 to 667       667/671
(99 %)
8 diff
(98.9 %id)
DA332876 hippocampus .a 2215 to 2813 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
BM906155 ovary (pool of 3) .a 2230 to 3119 11 to 908       898/1160
(77 %)
33 diff
(97.2 %id)
BF680899 Prostate .a 2325 to 2971 1 to 651       651/745
(87 %)
26 diff
(96.6 %id)
BE784178 eye, retinoblastoma .a 2345 to 2970 622 to 2     Submitted on the opposite strand 621/858
(72 %)
5 diff
(99.5 %id)
DB331140   .a 2378 to 2905 528 to 1       528/528
(100 %)
0 diff
(100 %id)
BP290358 lung .a 2396 to 2974 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BG121909 adenocarcinoma, cell line, Liver .a 2398 to 3112 13 to 730       718/752
(95 %)
13 diff
(98.3 %id)
DA395555 thalamus .a 2399 to 2980 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA395576 thalamus .a 2399 to 2992 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
FN163142 breast carcinoma .a 2436 to 2543 112 to 1     Submitted on the opposite strand 109/112
(97 %)
3 diff
(97.4 %id)
DA759926   .a 2437 to 2995 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
FN123529 breast carcinoma .a 2439 to 2508 1 to 70       70/71
(98 %)
1 diff
(98.6 %id)
DA398339 thalamus .a 2450 to 3011 2 to 564   capped   563/564
(99 %)
5 diff
(99.2 %id)
CR986810 T-Lymphocytes .a 2458 to 3399 1 to 934       934/936
(99 %)
10 diff
(99.0 %id)
FN100391 breast carcinoma .a 2517 to 2592 14 to 90       77/90
(85 %)
6 diff
(93.4 %id)
AA604009 Prostate, prostate tumor .a 2548 to 2953 406 to 1       406/406
(100 %)
0 diff
(100 %id)
BG256415 embryonal carcinoma, cell line, testis .a 2548 to 3285 1 to 735       735/768
(95 %)
14 diff
(98.2 %id)
BG504951 embryonal carcinoma, testis .a 2562 to 2982 244 to 664       421/664
(63 %)
8 diff
(98.8 %id)
T82367 lung .a 2563 to 2798 1 to 237       237/237
(100 %)
1 diff
(99.6 %id)
FN054418 breast carcinoma .a 2598 to 2682 84 to 1     Submitted on the opposite strand 84/91
(92 %)
5 diff
(94.6 %id)
AA166884   .a 2602 to 3127 523 to 1       523/525
(99 %)
9 diff
(98.3 %id)
FN097908 breast carcinoma .a 2633 to 2698 66 to 1     Submitted on the opposite strand 66/67
(98 %)
0 diff
(100 %id)
AA285257   .a 2646 to 3070 1 to 423       423/423
(100 %)
10 diff
(97.7 %id)
BF754327 colon .a 2661 to 3154 10 to 504       495/504
(98 %)
14 diff
(97.3 %id)
AL700978 human skeletal muscle .a 2662 to 3350 1 to 689       689/689
(100 %)
2 diff
(99.8 %id)
C75317   .a 2673 to 3135 461 to 2       460/463
(99 %)
11 diff
(97.7 %id)
BE895648 melanotic melanoma, skin .a 2693 to 3286 1 to 601       601/1079
(55 %)
21 diff
(98.1 %id)
BU428623 lymph .a 2704 to 3155 7 to 459       451/459
(98 %)
5 diff
(99.0 %id)
TI_154149413   .a 2704 to 3355 66 to 716       649/662
(98 %)
43 diff
(93.6 %id)
FN117309 breast carcinoma .a 2717 to 2815 98 to 1     Submitted on the opposite strand 98/98
(100 %)
1 diff
(99.0 %id)
FN104130 breast carcinoma .a 2719 to 2817 98 to 1     Submitted on the opposite strand 98/98
(100 %)
1 diff
(99.0 %id)
DA414991 thalamus .a 2722 to 3276 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CN355349 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2723 to 3222 9 to 508       500/508
(98 %)
6 diff
(98.9 %id)
BF096176 uterus_tumor .a 2728 to 3382 14 to 663       650/691
(94 %)
18 diff
(97.4 %id)
BU853203 testis .a 2728 to 3195 1 to 476       476/680
(70 %)
13 diff
(98.1 %id)
BG484727 lung .a 2732 to 3458 1 to 740       738/977
(75 %)
30 diff
(97.0 %id)
BG827136 muscle, rhabdomyosarcoma .a 2755 to 3568 7 to 816       811/881
(92 %)
24 diff
(97.3 %id)
CN355354 embryonic stem cells, cell lines H1, H7, andH9 .a 2769 to 3463 1 to 695       695/695
(100 %)
2 diff
(99.8 %id)
DA028827   .a 2797 to 3372 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA478035   .a 2805 to 3354 2 to 552   capped   551/552
(99 %)
2 diff
(99.7 %id)
CT002220 T-Lymphocytes .a 2812 to 3512 1 to 701       701/701
(100 %)
0 diff
(100 %id)
BG939932 blood .a 2823 to 3161 1 to 339       339/339
(100 %)
1 diff
(99.8 %id)
BG941614 blood .a 2823 to 3112 1 to 290   AAA   290/317
(91 %)
2 diff
(99.4 %id)
BG943682 blood .a 2823 to 3112 1 to 290       290/329
(88 %)
0 diff
(100 %id)
BE865547 bladder, carcinoma, cell line .a 2836 to 3458 1 to 619       619/642
(96 %)
16 diff
(97.6 %id)
BU430849 lymph .a 2887 to 3148 28 to 289       262/289
(90 %)
11 diff
(96.2 %id)
TI_154152409   .a 2887 to 3413 102 to 638       537/566
(94 %)
46 diff
(91.9 %id)
N67607 cochlea, ear .a 2905 to 3129 225 to 1       225/225
(100 %)
0 diff
(100 %id)
AA249438   .a 2922 to 3112 4 to 193       190/199
(95 %)
10 diff
(95.0 %id)
EC555570 Prostate .a 2961 to 3082 1 to 119       119/119
(100 %)
3 diff
(97.5 %id)
BG532083 embryonal carcinoma, testis .a 2972 to 3837 1 to 866       866/867
(99 %)
29 diff
(96.7 %id)
DA118681 cerebellum .a 2974 to 3515 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
BE154529 head_neck .a 3007 to 3393 7 to 391       385/397
(96 %)
10 diff
(97.5 %id)
AI904624 breast .a 3011 to 3346 1 to 339       339/339
(100 %)
10 diff
(97.1 %id)
AW382984 head_neck .a 3014 to 3393 1 to 381       381/387
(98 %)
8 diff
(98.0 %id)
CR999864 T-Lymphocytes .a 3040 to 3910 1 to 871       871/873
(99 %)
4 diff
(99.6 %id)
EB362695 eye, lens .a 3041 to 3601 570 to 11   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 560/570
(98 %)
0 diff
(100 %id)
CB145833 Liver .a 3050 to 3416 11 to 377       367/377
(97 %)
7 diff
(98.2 %id)
AA593781 breast, breast tumor .a 3055 to 3432 378 to 1       378/378
(100 %)
5 diff
(98.7 %id)
CB044525 colon, juvenile granulosa tumor .a 3070 to 3590 524 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 521/524
(99 %)
0 diff
(100 %id)
AW383006 head_neck .a 3094 to 3374 76 to 355       280/355
(78 %)
4 diff
(98.9 %id)
AU144359 whole embryo, mainly head .a 3113 to 3573 473 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 462/548
(84 %)
3 diff
(99.5 %id)
DA177528 amygdala .a 3234 to 3722 2 to 490   capped   489/489
(100 %)
0 diff
(100 %id)
AI648439 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 3240 to 3568 337 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 334/340
(98 %)
16 diff
(95.3 %id)
CB152469 cervix, Uterine .a 3241 to 3853 1 to 613       613/613
(100 %)
2 diff
(99.7 %id)
CB131872 Liver .a 3256 to 3813 1 to 557       557/557
(100 %)
1 diff
(99.9 %id)
T57805 lung .a 3274 to 3562 292 to 1       292/536
(54 %)
6 diff
(98.9 %id)
DA262020 caudate nucleus .a 3327 to 3883 2 to 560   capped   559/572
(97 %)
4 diff
(99.4 %id)
DB158752 thymus .a 3333 to 3922 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
CN355359 embryonic stem cells, cell lines H1, H7, andH9 .a 3380 to 3615 1 to 236       236/236
(100 %)
0 diff
(100 %id)
BG291139 bladder, transitional cell papilloma, cell line .a 3383 to 4064 1 to 676       676/677
(99 %)
9 diff
(98.7 %id)
DA184398 amygdala .a 3429 to 3817 2 to 390   capped   389/389
(100 %)
1 diff
(99.8 %id)
DA305880 hippocampus .a 3443 to 3978 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
EC557498 Prostate .a 3455 to 3561 108 to 3       106/108
(98 %)
0 diff
(100 %id)
AA913585 pooled .a 3457 to 3526 70 to 1       70/70
(100 %)
2 diff
(97.2 %id)
DB007221 cervix, tumor tissue .a 3466 to 4040 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BQ271117 Pancreas, Purified pancreatic islet .a 3490 to 4048 558 to 1       558/558
(100 %)
2 diff
(99.7 %id)
DB091738 testis .a 3518 to 4076 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
AA534667 colon .a 3534 to 4052 509 to 1       509/561
(90 %)
12 diff
(97.9 %id)
AL710700 human skeletal muscle .a 3553 to 4040 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
DA480364   .a 3555 to 4096 2 to 542   capped   541/541
(100 %)
1 diff
(99.9 %id)
DB137045 thymus .a 3563 to 4102 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
BX476840   .a 3566 to 3899 1 to 334       334/334
(100 %)
1 diff
(99.8 %id)
BE934120 head_neck .a 3572 to 3762 15 to 204       190/214
(88 %)
7 diff
(96.8 %id)
CN355362 embryonic stem cells, DMSO-treated H9 cellline .a 3658 to 3835 1 to 179       179/179
(100 %)
1 diff
(99.5 %id)
CD655285 Embryonic Stem cells .a 3744 to 4456 7 to 712       706/781
(90 %)
13 diff
(98.4 %id)
DB201419 trachea .a 3752 to 4321 2 to 571   capped   570/581
(98 %)
1 diff
(99.9 %id)
BG115981 duodenal adenocarcinoma, cell line, small intestine .a 3825 to 4485 1 to 661       661/1014
(65 %)
17 diff
(98.4 %id)
CN355353 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3826 to 4563 9 to 745       737/764
(96 %)
10 diff
(98.7 %id)
AL135021 melanoma (MeWo cell line) .a 3846 to 4474 1 to 629       629/629
(100 %)
0 diff
(100 %id)
CK825498 Pancreas, Purified pancreatic islet .a 3895 to 4042 148 to 1     Submitted on the opposite strand 148/148
(100 %)
0 diff
(100 %id)
BU675891 lung, Primary Lung Epithelial Cells .a 3912 to 4570 17 to 675     Submitted on the opposite strand 659/659
(100 %)
4 diff
(99.4 %id)
CA976194 sciatic nerve .a 3965 to 4804 13 to 851       839/852
(98 %)
3 diff
(99.7 %id)
CN355360 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 3991 to 4651 1 to 662       662/662
(100 %)
3 diff
(99.6 %id)
BQ050253 leiomyosarcoma, uterus .a 4008 to 5002 1 to 1004       1004/1006
(99 %)
36 diff
(96.5 %id)
AW377237 colon .a 4037 to 4567 543 to 15       529/544
(97 %)
15 diff
(97.3 %id)
AW004054 pooled germ cell tumors .a 4075 to 4882 804 to 1       804/804
(100 %)
9 diff
(98.9 %id)
BQ220803 embryonal carcinoma, cell line, testis .a 4085 to 4968 1 to 884       884/884
(100 %)
9 diff
(99.0 %id)
AA336494 endometrium .a 4096 to 4358 1 to 264       264/264
(100 %)
3 diff
(98.9 %id)
AA789111 germinal center B cell .a 4098 to 4353 175 to 430     Submitted on the opposite strand 256/430
(59 %)
6 diff
(98.7 %id)
DA660226   .a 4119 to 4624 58 to 563   capped   506/562
(90 %)
7 diff
(98.8 %id)
BE165360 head_neck .a 4161 to 4554 14 to 407       394/407
(96 %)
8 diff
(98.1 %id)
CD518324 White Matter .a 4161 to 4828 44 to 715       672/890
(75 %)
17 diff
(98.1 %id)
BX280726 embryonal carcinoma, cell line, testis .a 4162 to 4659 1 to 498       498/498
(100 %)
0 diff
(100 %id)
BM468903 embryonal carcinoma, cell line, testis .a 4162 to 5149 1 to 995       995/999
(99 %)
13 diff
(98.7 %id)
BQ225204 leiomyosarcoma, uterus .a 4174 to 5206 1 to 1035       1035/1042
(99 %)
23 diff
(97.8 %id)
TI_154187618   .a 4186 to 5022 118 to 951       834/989
(84 %)
33 diff
(96.7 %id)
BP243942 Liver .a 4196 to 4769 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
BE464004 pooled germ cell tumors .a 4204 to 4882 677 to 1       677/677
(100 %)
4 diff
(99.5 %id)
AA114216 brain, neuroepithelial cells .a 4215 to 4683 1 to 486       484/504
(96 %)
14 diff
(97.3 %id)
CX165728 human embryonic stem cells differentiated toan early endodermal cell type .a 4256 to 5090 1 to 835       835/835
(100 %)
0 diff
(100 %id)
CR988644 T-Lymphocytes .a 4266 to 5115 1 to 853       853/853
(100 %)
5 diff
(99.5 %id)
CN355361 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4315 to 5082 22 to 790       769/790
(97 %)
7 diff
(99.2 %id)
BF593377 pooled germ cell tumors .a 4315 to 4879 565 to 1       565/598
(94 %)
14 diff
(97.7 %id)
CN355350 embryonic stem cells, DMSO-treated H9 cellline .a 4353 to 4967 1 to 615       615/615
(100 %)
0 diff
(100 %id)
BJ989516 hepatoblastoma .a 4371 to 4966 5 to 600       596/600
(99 %)
6 diff
(99.0 %id)
BM543234 duodenal adenocarcinoma, cell line, small intestine .a 4385 to 5230 13 to 859       847/1044
(81 %)
15 diff
(98.6 %id)
AI337225 pooled germ cell tumors .a 4405 to 4882 478 to 1       478/478
(100 %)
5 diff
(99.0 %id)
BU568003 testis .a 4480 to 5167 55 to 745       692/822
(84 %)
19 diff
(97.7 %id)
AI631612 pooled germ cell tumors .a 4482 to 4882 399 to 1       399/410
(97 %)
8 diff
(98.1 %id)
BG258300 embryonal carcinoma, cell line, testis .a 4484 to 5165 1 to 690       690/872
(79 %)
18 diff
(98.0 %id)
CF780845 Pooled Chondrosarcoma Tumor cells .a 4494 to 5167 8 to 685       678/1044
(64 %)
16 diff
(98.5 %id)
DA817354   .a 4548 to 5119 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
CN355356 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4583 to 5325 1 to 743       743/743
(100 %)
5 diff
(99.4 %id)
BG572608 placenta .a 4597 to 5369 1 to 767       767/767
(100 %)
17 diff
(97.8 %id)
AA449008   .a 4621 to 5095 1 to 475       475/475
(100 %)
0 diff
(100 %id)
AW592981.
matches multiple genes
pooled .a 4627 to 5098 468 to 6     also hits gene ROCK1P1 463/468
(98 %)
19 diff
(96.0 %id)
BP274344 Kidney .a 4632 to 5170 1 to 539       539/582
(92 %)
9 diff
(98.5 %id)
BP221273 colon .a 4638 to 5207 1 to 570       570/570
(100 %)
0 diff
(100 %id)
BG113483 Bone, osteosarcoma, cell line .a 4645 to 5321 1 to 685       685/927
(73 %)
22 diff
(97.7 %id)
BM457267 embryonal carcinoma, cell line, testis .a 4648 to 5457 1 to 820       820/957
(85 %)
29 diff
(97.0 %id)
BE889548 leiomyosarcoma, uterus .a 4656 to 5291 1 to 641       641/1232
(52 %)
11 diff
(99.2 %id)
AA490358 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 4662 to 5030 1 to 369       369/370
(99 %)
0 diff
(100 %id)
AA247910   .a 4674 to 4915 1 to 242       242/242
(100 %)
0 diff
(100 %id)
AV696515 hepatocellular carcinoma .a 4705 to 5031 1 to 323       323/358
(90 %)
7 diff
(98.1 %id)
BE811884 amnion_normal .a 4730 to 5243 1 to 513       513/515
(99 %)
14 diff
(97.3 %id)
BE811936 amnion_normal .a 4736 to 5242 1 to 508       508/508
(100 %)
8 diff
(98.5 %id)
BP420948 small intestine .a 4744 to 5118 10 to 384     Submitted on the opposite strand 375/384
(97 %)
12 diff
(96.9 %id)
CX786844 human embryonic stem cells .a 4753 to 5520 1 to 768       768/768
(100 %)
0 diff
(100 %id)
DW009846.
matches multiple genes
pooled .a 4785 to 4950 1 to 166     also hits gene ROCK1P1 166/166
(100 %)
3 diff
(98.2 %id)
N31650 melanocyte .a 4793 to 5230 1 to 446       446/498
(89 %)
8 diff
(98.4 %id)
BY798662 eye .a 4821 to 5410 1 to 590       590/590
(100 %)
0 diff
(100 %id)
BP366831 thymus .a 4821 to 5401 1 to 582       582/582
(100 %)
2 diff
(99.7 %id)
AU117434 whole embryo, mainly head .a 4825 to 5691 2 to 868   capped   867/867
(100 %)
8 diff
(99.1 %id)
AU121527 mammary gland .a 4827 to 5690 2 to 865   capped   864/864
(100 %)
8 diff
(99.1 %id)
BI869976 adenocarcinoma, cell line, Liver .a 4839 to 5481 1 to 642       642/670
(95 %)
6 diff
(99.2 %id)
TI_57229566   .a 4839 to 5481 49 to 690       642/670
(95 %)
6 diff
(99.2 %id)
N44341   .a 4875 to 5213 340 to 2       339/340
(99 %)
0 diff
(100 %id)
DT216318 brain .a 4890 to 5512 1 to 624       624/624
(100 %)
2 diff
(99.7 %id)
CN355355 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4936 to 5594 1 to 659   tiling clone,   659/659
(100 %)
1 diff
(99.9 %id)
CX782184 human embryonic stem cells .a 4945 to 5809 1 to 866       866/866
(100 %)
3 diff
(99.7 %id)
BF571220 melanotic melanoma, high MDR, skin .a 4997 to 5699 1 to 707       707/740
(95 %)
40 diff
(94.6 %id)
EB385581 eye, optic nerve .a 5038 to 5822 1 to 786       786/786
(100 %)
3 diff
(99.7 %id)
BF691358 melanotic melanoma, high MDR, skin .a 5060 to 5709 1 to 650       650/783
(83 %)
26 diff
(96.7 %id)
BE171645 head_neck .a 5084 to 5289 1 to 206       206/208
(99 %)
11 diff
(94.8 %id)
BF743680 breast .a 5100 to 5410 14 to 322       309/329
(93 %)
6 diff
(98.2 %id)
BF993175 placenta_normal .a 5101 to 5465 372 to 11       362/389
(93 %)
0 diff
(100 %id)
H45236 brain .a 5105 to 5458 1 to 364       364/408
(89 %)
11 diff
(97.4 %id)
BE891335 melanotic melanoma, skin .a 5127 to 5853 1 to 743       743/960
(77 %)
21 diff
(97.9 %id)
AA312976 colon .a 5139 to 5445 1 to 307       307/307
(100 %)
2 diff
(99.4 %id)
BF242433 bone marrow, from acute myelogenous leukemia .a 5162 to 5835 1 to 669       669/825
(81 %)
25 diff
(97.0 %id)
AW950149   .a 5169 to 5702 1 to 538       538/538
(100 %)
9 diff
(98.4 %id)
AI701860 carcinoid, lung .a 5211 to 5586 1 to 376     Submitted on the opposite strand 376/379
(99 %)
3 diff
(99.3 %id)
BE219327 carcinoid, lung .a 5211 to 5733 1 to 523     Submitted on the opposite strand 523/523
(100 %)
0 diff
(100 %id)
BE467584 carcinoid, lung .a 5211 to 5672 1 to 462     Submitted on the opposite strand 462/462
(100 %)
0 diff
(100 %id)
BE671549 carcinoid, lung .a 5211 to 5648 1 to 438     Submitted on the opposite strand 438/438
(100 %)
1 diff
(99.8 %id)
BG149623 carcinoid, lung .a 5211 to 5532 1 to 323     Submitted on the opposite strand 323/323
(100 %)
1 diff
(99.7 %id)
BF217715 brain, glioblastoma .a 5213 to 5779 1 to 571   AAA   571/985
(57 %)
22 diff
(97.8 %id)
AV683882 hepatocellular carcinoma .a 5230 to 5798 1 to 565       565/629
(89 %)
9 diff
(98.6 %id)
AV696711 hepatocellular carcinoma .a 5230 to 5583 1 to 347       347/354
(98 %)
6 diff
(98.4 %id)
BQ429410 bone marrow, from acute myelogenous leukemia .a 5246 to 6012 1 to 777       777/778
(99 %)
14 diff
(98.3 %id)
R95490.
matches multiple genes
  .a 5248 to 5387 1 to 144     also hits gene ROCK1P1 144/144
(100 %)
5 diff
(96.6 %id)
BM982785 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 5280 to 5850 1 to 571     Submitted on the opposite strand 571/571
(100 %)
6 diff
(99.0 %id)
BF815932 colon_ins .a 5281 to 5670 1 to 390       390/391
(99 %)
3 diff
(99.3 %id)
BF816117 colon_ins .a 5281 to 5663 1 to 383       383/384
(99 %)
7 diff
(98.2 %id)
BU619117 Cell Line, Chondrosarcoma .a 5327 to 6031 721 to 19   AAA   703/703
(100 %)
3 diff
(99.6 %id)
BG485358 lung .a 5345 to 5832 1 to 494       494/755
(65 %)
18 diff
(97.7 %id)
BF244904 brain, glioblastoma .a 5347 to 6065 1 to 728       728/827
(88 %)
45 diff
(94.6 %id)
CA771766.
matches multiple genes
Pancreas, Purified pancreatic islet .a 5348 to 6035 689 to 1     also hits gene ROCK1P1 689/689
(100 %)
6 diff
(99.2 %id)
BF952463 nervous_normal .a 5351 to 5951 617 to 20       598/621
(96 %)
0 diff
(100 %id)
BQ342926 nervous_normal .a 5369 to 5857 496 to 1       496/496
(100 %)
31 diff
(93.8 %id)
BF897399.
matches multiple genes
marrow .a 5384 to 5669 296 to 12     Submitted on the opposite strand, also hits gene ROCK1P1 285/296
(96 %)
0 diff
(100 %id)
BE883241 leiomyosarcoma, uterus .a 5403 to 5855 1 to 455       455/575
(79 %)
9 diff
(98.5 %id)
CD677253 eye, Trabecular meshwork .a 5406 to 6053 1 to 648   tiling clone,   648/648
(100 %)
1 diff
(99.9 %id)
BQ901138 sympathetic trunk .a 5410 to 5995 1 to 590       590/1032
(57 %)
12 diff
(98.9 %id)
CD641334 pooled .a 5415 to 6106 1 to 689       689/693
(99 %)
8 diff
(98.9 %id)
R63601 placenta .a 5430 to 5765 1 to 347       347/372
(93 %)
11 diff
(97.1 %id)
R62919 placenta .a 5430 to 5801 1 to 378       378/378
(100 %)
14 diff
(96.3 %id)
CB157965 Liver .a 5442 to 5927 1 to 486       486/486
(100 %)
1 diff
(99.8 %id)
BF126338.
matches multiple genes
Liver .a 5452 to 6095 1 to 644     also hits gene ROCK1P1 644/843
(76 %)
40 diff
(95.3 %id)
BF107444 placenta .a 5484 to 6159 1 to 672       672/752
(89 %)
47 diff
(93.8 %id)
BF954893 nervous_normal .a 5498 to 5951 455 to 2       454/455
(99 %)
0 diff
(100 %id)
BF963754 nervous_normal .a 5510 to 5939 430 to 1       430/430
(100 %)
4 diff
(99.1 %id)
BM836169 stomach .a 5510 to 5968 1 to 459       459/459
(100 %)
2 diff
(99.6 %id)
AA922029 pooled .a 5543 to 5962 420 to 1       420/420
(100 %)
0 diff
(100 %id)
BG109436 Bone, osteosarcoma, cell line .a 5553 to 6092 1 to 560       560/1115
(50 %)
19 diff
(98.3 %id)
AI697252 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5569 to 6037 469 to 1       469/469
(100 %)
0 diff
(100 %id)
BQ424351 melanotic melanoma, skin .a 5577 to 6449 1 to 875       875/875
(100 %)
4 diff
(99.6 %id)
D61907   .a 5586 to 6002 10 to 426       417/428
(97 %)
4 diff
(99.1 %id)
BE810520 leiomios .a 5597 to 6203 607 to 1       607/611
(99 %)
10 diff
(98.4 %id)
BE926449 breast .a 5597 to 6191 594 to 3       592/598
(98 %)
0 diff
(100 %id)
R21223 placenta .a 5614 to 5910 1 to 308       308/318
(96 %)
12 diff
(96.3 %id)
AL121217.
matches multiple genes
melanoma (MeWo cell line) .a 5631 to 6033 1 to 403     also hits gene ROCK1P1 403/403
(100 %)
2 diff
(99.6 %id)
AI955474.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5661 to 6032 373 to 1     also hits gene ROCK1P1 373/373
(100 %)
1 diff
(99.8 %id)
AA714035 germinal center B cell .a 5696 to 6037 345 to 4       342/345
(99 %)
0 diff
(100 %id)
BG539987 lung .a 5812 to 6495 1 to 686       686/746
(91 %)
9 diff
(98.8 %id)
BU742284 eye, fetal eye .a 5813 to 6488 691 to 16   AAA   676/677
(99 %)
0 diff
(100 %id)
BU930445 Prostate .a 5860 to 6641 1 to 782   tiling clone,   782/783
(99 %)
10 diff
(98.8 %id)
BF996802.
matches multiple genes
placenta_normal .a 5883 to 6196 16 to 327   tiling clone, also hits gene ROCK1P1 312/365
(85 %)
15 diff
(95.9 %id)
TI_159713086   .a 5883 to 6492 708 to 97   AAA   612/1081
(56 %)
0 diff
(100 %id)
DQ786321   .a 5898 to 6490 1 to 594   AAA   594/594
(100 %)
5 diff
(99.2 %id)
CB051943.
matches multiple genes
leiomyosarcoma, soft tissue .a 5900 to 6012 1 to 113     also hits gene ROCK1P1 113/113
(100 %)
7 diff
(93.9 %id)
DB364624   .a 5924 to 6490 564 to 1       564/565
(99 %)
15 diff
(97.4 %id)
AA488782.
matches multiple genes
germinal center B cell .a 5936 to 6395 1 to 460     also hits gene ROCK1P1 460/460
(100 %)
1 diff
(99.8 %id)
AI872948 carcinoid, lung .a 5946 to 6495 553 to 1       553/625
(88 %)
36 diff
(94.3 %id)
BJ989517 hepatoblastoma .a 5948 to 6487 540 to 1       540/540
(100 %)
0 diff
(100 %id)
DB355243 whole embryo, mainly head .a 5967 to 6537 571 to 1       571/571
(100 %)
11 diff
(98.1 %id)
N22548 cochlea, ear .a 5989 to 6491 502 to 3       500/502
(99 %)
0 diff
(100 %id)
D62711   .a 5990 to 6258 1 to 268       268/269
(99 %)
4 diff
(98.6 %id)
AW512255 lymph node, lymphoma, follicular mixed small and largecell .a 5994 to 6491 498 to 1       498/498
(100 %)
0 diff
(100 %id)
AI884576 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 5999 to 6488 503 to 14   AAA   490/490
(100 %)
0 diff
(100 %id)
AA114179 brain, neuroepithelial cells .a 6002 to 6492 495 to 2       494/495
(99 %)
0 diff
(100 %id)
D62945   .a 6009 to 6268 1 to 260       260/260
(100 %)
0 diff
(100 %id)
AA403122.
matches multiple genes
  .a 6009 to 6489 484 to 4     also hits gene ROCK1P1 481/484
(99 %)
0 diff
(100 %id)
BE218601 carcinoid, lung .a 6021 to 6489 475 to 7       469/475
(98 %)
0 diff
(100 %id)
AI612907 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 6023 to 6491 471 to 3       469/471
(99 %)
0 diff
(100 %id)
BF511985   .a 6046 to 6490 458 to 16   AAA   443/453
(97 %)
3 diff
(99.4 %id)
D82698   .a 6052 to 6253 1 to 202       202/202
(100 %)
0 diff
(100 %id)
D82710   .a 6052 to 6207 1 to 156       156/156
(100 %)
2 diff
(98.8 %id)
D82796   .a 6052 to 6400 1 to 350       350/350
(100 %)
3 diff
(99.2 %id)
D82808   .a 6052 to 6365 1 to 314       314/314
(100 %)
1 diff
(99.7 %id)
AW614270 Kidney .a 6067 to 6495 436 to 2       435/440
(98 %)
0 diff
(100 %id)
AA846011 Spleen .a 6075 to 6491 420 to 4       417/420
(99 %)
0 diff
(100 %id)
BE326514 carcinoid, lung .a 6079 to 6491 415 to 3       413/415
(99 %)
0 diff
(100 %id)
AA034503 uterus .a 6081 to 6488 412 to 1       412/412
(100 %)
8 diff
(98.1 %id)
AA824590 germinal center B cell .a 6081 to 6490 438 to 30   AAA   409/409
(100 %)
1 diff
(99.8 %id)
BE326534 carcinoid, lung .a 6084 to 6541 458 to 1       458/458
(100 %)
0 diff
(100 %id)
BP396887 pancreatic islet .a 6092 to 6495 1 to 405     Submitted on the opposite strand 405/407
(99 %)
4 diff
(99.1 %id)
AA348286 brain, hippocampus .a 6093 to 6490 400 to 1       400/400
(100 %)
7 diff
(98.3 %id)
BP424146 small intestine .a 6093 to 6489 1 to 397     Submitted on the opposite strand 397/397
(100 %)
2 diff
(99.5 %id)
T27263   .a 6101 to 6322 1 to 222       222/222
(100 %)
4 diff
(98.2 %id)
D79331 aorta .a 6113 to 6427 1 to 316       316/316
(100 %)
1 diff
(99.7 %id)
AA732053 germinal center B cell .a 6118 to 6490 396 to 24   AAA   373/373
(100 %)
0 diff
(100 %id)
AA807156 germinal center B cell .a 6118 to 6490 401 to 30   AAA   372/372
(100 %)
3 diff
(99.2 %id)
AA724511 parathyroid gland, parathyroid tumor .a 6131 to 6495 369 to 5       365/369
(98 %)
0 diff
(100 %id)
DB360616 mammary gland .a 6134 to 6674 545 to 1   tiling clone,   545/545
(100 %)
12 diff
(97.8 %id)
T96420 lung .a 6140 to 6465 333 to 1       333/375
(88 %)
8 diff
(97.9 %id)
R62920 placenta .a 6140 to 6485 355 to 1       355/409
(86 %)
12 diff
(97.1 %id)
AA039307 uterus .a 6143 to 6549 423 to 11   AAA   413/476
(86 %)
9 diff
(98.2 %id)
R21224 placenta .a 6147 to 6489 352 to 1       352/352
(100 %)
12 diff
(96.6 %id)
AI695226 Kidney .a 6170 to 6538 370 to 1       370/370
(100 %)
1 diff
(99.8 %id)
AI865947 adenocarcinoma, Pancreas .a 6173 to 6491 320 to 1       320/321
(99 %)
3 diff
(99.1 %id)
AA490260 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6188 to 6490 303 to 1       303/303
(100 %)
0 diff
(100 %id)
H67517 nose, olfactory epithelium .a 6212 to 6489 1 to 279       279/280
(99 %)
2 diff
(99.3 %id)
BM694039 eye, Retina Foveal and Macular .a 6232 to 6490 1 to 259   AAA   259/259
(100 %)
0 diff
(100 %id)
AV682053 hepatocellular carcinoma .a 6238 to 6490 1 to 253   AAA   253/253
(100 %)
2 diff
(99.3 %id)
BE464001 pooled germ cell tumors .a 6330 to 6480 1 to 151     Submitted on the opposite strand 151/151
(100 %)
0 diff
(100 %id)
AA450364   .a 6371 to 6678 311 to 4   tiling clone,   308/311
(99 %)
0 diff
(100 %id)
C01268   .a 6402 to 6490 1 to 89       89/89
(100 %)
0 diff
(100 %id)
GD144298   .a 6422 to 6495 1 to 74       74/79
(93 %)
3 diff
(96.3 %id)
GD161211   .a 6423 to 6495 1 to 74       74/85
(87 %)
5 diff
(94.2 %id)
GD161255   .a 6423 to 6495 1 to 73       73/76
(96 %)
4 diff
(94.8 %id)
AA491092 germinal center B cell .a 6424 to 6483 1 to 60       60/60
(100 %)
0 diff
(100 %id)
GD142029   .a 6431 to 6495 7 to 71       65/76
(85 %)
5 diff
(93.5 %id)
AU138784 placenta .b 1 to 480 2 to 486   tiling clone, to resequence, capped   485/534
(90 %)
6 diff
(98.9 %id)
BX481772   .b 325 to 996 1 to 672   tiling clone,   672/672
(100 %)
1 diff
(99.9 %id)
DB378762 placenta .b 1893 to 2309 418 to 2   tiling clone, to resequence,   417/418
(99 %)
0 diff
(100 %id)
DA568369 whole embryo, mainly head .c 1 to 764 2 to 771   tiling clone, capped   770/793
(97 %)
20 diff
(97.5 %id)
AA548369 germ cell tumor .c 1148 to 1686 540 to 1   tiling clone,   540/543
(99 %)
8 diff
(98.6 %id)
DB354872 whole embryo, mainly head .c 1166 to 1688 518 to 1   tiling clone,   518/571
(90 %)
10 diff
(98.3 %id)
AA371605   .c 1169 to 1524 1 to 355   tiling clone,   355/355
(100 %)
1 diff
(99.8 %id)
AA371604   .c 1342 to 1688 347 to 1       347/347
(100 %)
2 diff
(99.5 %id)
DA279749 corpus callosum .d 1 to 491 2 to 493   tiling clone, capped   492/492
(100 %)
1 diff
(99.8 %id)
DA167958 amygdala .d 476 to 1058 2 to 585   tiling clone, capped   584/584
(100 %)
1 diff
(99.9 %id)
AW377287 colon .e 1 to 655 1 to 651 E112G Q119P H126P D153G N169D ... tiling clone,   651/653
(99 %)
15 diff
(97.8 %id)
BX475178   .f 1 to 562 1 to 562   tiling clone,   562/562
(100 %)
1 diff
(99.9 %id)
BU198493   .f 435 to 1053 1 to 619 exact tiling clone,   619/620
(99 %)
5 diff
(99.2 %id)
BU198950   .f 617 to 1233 1 to 617   tiling clone,   617/906
(68 %)
18 diff
(98.1 %id)
BX415099 thymus .g-u 1 to 890 1 to 892       892/897
(99 %)
6 diff
(99.4 %id)
BX426049 thymus .g-u 1 to 785 1 to 797       797/1067
(74 %)
46 diff
(95.7 %id)
BX447465 thymus .g-u 1 to 1111 1 to 1114   tiling clone,   1114/1119
(99 %)
12 diff
(99.0 %id)
DA215624.
matches multiple genes
brain .g-u 625 to 1175 2 to 548   tiling clone, to resequence, capped also hits gene mamuri 547/547
(100 %)
6 diff
(99.0 %id)
DA789542 brain .g-u 1889 to 2463 2 to 581   tiling clone, capped   580/580
(100 %)
3 diff
(99.5 %id)
BX477010   .g-u 1977 to 2601 1 to 624   tiling clone,   624/624
(100 %)
4 diff
(99.4 %id)
CV397706 kidney_tumor .g-u 2552 to 3031 66 to 546   tiling clone,   481/550
(87 %)
6 diff
(99.0 %id)
BM728601 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g-u 2916 to 3669 1 to 749 exact tiling clone,   749/751
(99 %)
6 diff
(99.3 %id)
DB326538 brain .g-u 3884 to 4431 549 to 1   tiling clone,   549/549
(100 %)
1 diff
(99.9 %id)
DB304690.
matches multiple genes
brain .g-u 3953 to 4490 539 to 1   to resequence, also hits gene mamuri 539/539
(100 %)
6 diff
(98.9 %id)
D59331   .g-u 4068 to 4615 547 to 1       547/547
(100 %)
6 diff
(99.0 %id)
AW014127   .g-u 4079 to 4615 552 to 16   AAA   537/537
(100 %)
2 diff
(99.7 %id)
AI707514 colon .g-u 4110 to 4608 499 to 1       499/499
(100 %)
1 diff
(99.8 %id)
AW242769 Kidney .g-u 4112 to 4618 507 to 1       507/511
(99 %)
4 diff
(99.3 %id)
AW512281 lymph node, lymphoma, follicular mixed small and largecell .g-u 4147 to 4617 471 to 1       471/471
(100 %)
1 diff
(99.8 %id)
N59296 multiple sclerosis lesions .g-u 4197 to 4615 423 to 1       423/425
(99 %)
9 diff
(97.9 %id)
AI625255 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .g-u 4226 to 4619 399 to 6       394/399
(98 %)
0 diff
(100 %id)
AI401720 Prostate .g-u 4245 to 4619 375 to 1   tiling clone,   375/375
(100 %)
0 diff
(100 %id)
D59332   .g-u 4281 to 4615 335 to 1       335/335
(100 %)
1 diff
(99.8 %id)
AA565565 germ cell tumor .g-u 4303 to 4615 313 to 1       313/313
(100 %)
0 diff
(100 %id)
BM728671 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .h-u 1 to 675 1 to 675 exact tiling clone,   675/675
(100 %)
0 diff
(100 %id)
BU742609 eye, fetal eye .h-u 352 to 858 507 to 1 exact tiling clone,   507/513
(98 %)
0 diff
(100 %id)
AW997650 breast_normal .i-u 1 to 606 1 to 606 exact     606/606
(100 %)
7 diff
(98.9 %id)
AW997657 breast_normal .i-u 13 to 648 17 to 652 exact tiling clone,   636/652
(97 %)
6 diff
(99.1 %id)
AW997660 breast_normal .i-u 13 to 686 17 to 686 exact tiling clone,   670/688
(97 %)
9 diff
(98.7 %id)
BX641499.
matches multiple genes
  .j-u 1 to 623 1 to 624 exact tiling clone, also hits gene ROCK1P1 624/624
(100 %)
1 diff
(99.9 %id)
BE769120 prostate_tumor .k-u 1 to 358 378 to 18 exact tiling clone,   361/383
(94 %)
0 diff
(100 %id)
AV736496 cord Blood .l 1 to 340 336 to 6   tiling clone, Submitted on the opposite strand 331/352
(94 %)
9 diff
(97.5 %id)
AW592981.
matches multiple genes
pooled P1.a 540 to 1011 468 to 6     also hits gene ROCK1P1 463/468
(98 %)
20 diff
(95.8 %id)
DW009846.
matches multiple genes
pooled P1.a 698 to 863 1 to 166     also hits gene ROCK1P1 166/166
(100 %)
3 diff
(98.2 %id)
AA401848.
matches multiple genes
  P1.a 716 to 1054 1 to 339     also hits gene ROCK1P1 339/339
(100 %)
0 diff
(100 %id)
R95490.
matches multiple genes
  P1.a 1161 to 1300 1 to 144     also hits gene ROCK1P1 144/144
(100 %)
5 diff
(96.6 %id)
CA772611.
matches multiple genes
Pancreas, Purified pancreatic islet P1.d-u 403 to 927 14 to 538   tiling clone, also hits gene ROCK1P1 525/538
(97 %)
6 diff
(98.9 %id)
BF897399.
matches multiple genes
marrow P1.d-u 458 to 743 296 to 12     Submitted on the opposite strand, also hits gene ROCK1P1 285/296
(96 %)
0 diff
(100 %id)
BF126338.
matches multiple genes
Liver P1.d-u 526 to 1169 1 to 644     also hits gene ROCK1P1 644/843
(76 %)
41 diff
(95.2 %id)
AL121217.
matches multiple genes
melanoma (MeWo cell line) P1.d-u 705 to 1107 1 to 403     also hits gene ROCK1P1 403/403
(100 %)
3 diff
(99.3 %id)
AI955474.
matches multiple genes
uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors P1.d-u 735 to 1106 373 to 1     also hits gene ROCK1P1 373/373
(100 %)
2 diff
(99.5 %id)
BF996802.
matches multiple genes
placenta_normal P1.d-u 957 to 1270 16 to 327   tiling clone, also hits gene ROCK1P1 312/365
(85 %)
16 diff
(95.7 %id)
CB051943.
matches multiple genes
leiomyosarcoma, soft tissue P1.d-u 974 to 1086 1 to 113     also hits gene ROCK1P1 113/113
(100 %)
7 diff
(93.9 %id)
AA488998.
matches multiple genes
germinal center B cell P1.d-u 1167 to 1564 429 to 32   AAA also hits gene ROCK1P1 398/398
(100 %)
7 diff
(98.3 %id)
BX641499.
matches multiple genes
  P1.g-u 1 to 622 1 to 624 exact tiling clone, also hits gene ROCK1P1 624/624
(100 %)
2 diff
(99.7 %id)
AV705039 adrenal gland Gene ROCK1, variant not shown         Suspected internal deletion, this clone was ignored    
AW997653 breast_normal Gene ROCK1, variant not shown         This clone was ignored    
AV697816 hepatocellular carcinoma Gene ROCK1, variant not shown         Suspected internal deletion, this clone was ignored    
AV661222 corresponding non cancerous liver tissue Gene ROCK1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
T39404.
matches multiple genes
placenta Gene ROCK1, variant not shown         This clone was ignored, also hits gene stawu    
T39404.
matches multiple genes
placenta Gene stawu, variant not shown         This clone was ignored, also hits gene stawu    
T40560.
matches multiple genes
placenta Gene ROCK1, variant not shown         This clone was ignored, also hits gene stawu    
T40560.
matches multiple genes
placenta Gene stawu, variant not shown         This clone was ignored, also hits gene stawu    
H68430 liver and spleen Gene ROCK1, variant not shown         This clone was ignored    
H68718 liver and spleen Gene ROCK1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u, .i-u, .j-u, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI